Title: Reading ASD Binary Files in R
Description: A simple driver that reads binary data created by the ASD Inc.
portable spectrometer instruments, such as the FieldSpec (for more information,
see <http://www.asdi.com/products/fieldspec-spectroradiometers>). Spectral data
can be extracted from the ASD files as raw (DN), white reference, radiance, or
reflectance. Additionally, the metadata information contained in the ASD file
header can also be accessed.
Author: Pierre Roudier [aut, cre],
Etienne Lalibert'{e} [ctb]
Maintainer: Pierre Roudier <roudierp@landcareresearch.co.nz>
Diff between asdreader versions 0.1-2 dated 2016-03-03 and 0.1-3 dated 2017-09-12
DESCRIPTION | 17 +++++++++++------ MD5 | 22 +++++++++++----------- R/asdreader.r | 9 ++++++--- R/data.r | 2 ++ R/get-metadata.r | 5 +++++ R/get-spectrum.r | 46 +++++++++++++++++++++++++++++++++------------- README.md | 8 +++++--- man/asd_file.Rd | 5 ++--- man/asdreader.Rd | 5 ++--- man/get_metadata.Rd | 8 ++++---- man/get_spectra.Rd | 9 +++++---- man/soil.asd.Rd | 5 ++--- 12 files changed, 88 insertions(+), 53 deletions(-)
Title: Lift (Gains) Tables and Charts
Description: Constructs gains tables and lift charts for prediction algorithms. Gains tables and lift charts are commonly used in direct marketing applications. The method is described in Drozdenko and Drake (2002), "Optimal Database Marketing", Chapter 11.
Author: Craig A. Rolling <craig.rolling@slu.edu>
Maintainer: Craig A. Rolling <craig.rolling@slu.edu>
Diff between gains versions 1.1 dated 2013-07-25 and 1.2 dated 2017-09-12
gains-1.1/gains/data/ciaScores.txt.gz |only gains-1.2/gains/CHANGES | 1 + gains-1.2/gains/DESCRIPTION | 16 ++++++++-------- gains-1.2/gains/MD5 | 11 +++++++---- gains-1.2/gains/NAMESPACE | 3 +++ gains-1.2/gains/data/MineThatData.RData |only gains-1.2/gains/data/ciaScores.txt.bz2 |only gains-1.2/gains/data/datalist |only gains-1.2/gains/man/MineThatData.Rd |only 9 files changed, 19 insertions(+), 12 deletions(-)
Title: Efficient Iterators for Permutations and Combinations
Description: A collection of iterators for generating permutations and combinations with or
without replacement; with distinct items or non-distinct items (multiset).
The generated sequences are in lexicographical order (dictionary order). The
algorithms to generate permutations and combinations are memory efficient. These
iterative algorithms enable users to process all sequences without putting all
results in the memory at the same time. The algorithms are written in C/C++ for
faster performances.
Author: Randy Lai [aut, cre]
Maintainer: Randy Lai <randy.cs.lai@gmail.com>
Diff between iterpc versions 0.3.1 dated 2017-08-28 and 0.3.3 dated 2017-09-12
iterpc-0.3.1/iterpc/R/iterator.R |only iterpc-0.3.1/iterpc/src/mbcomb |only iterpc-0.3.1/iterpc/src/utils/k-permutation.c |only iterpc-0.3.1/iterpc/src/utils/k-permutation.h |only iterpc-0.3.3/iterpc/DESCRIPTION | 14 +- iterpc-0.3.3/iterpc/MD5 | 86 +++++------------- iterpc-0.3.3/iterpc/R/iterpc.R |only iterpc-0.3.3/iterpc/README.md | 2 iterpc-0.3.3/iterpc/inst/doc/combinations.html | 4 iterpc-0.3.3/iterpc/inst/doc/permutations.html | 4 iterpc-0.3.3/iterpc/man/getall.Rd | 2 iterpc-0.3.3/iterpc/man/getcurrent.Rd | 2 iterpc-0.3.3/iterpc/man/getlength.Rd | 2 iterpc-0.3.3/iterpc/man/getnext.Rd | 2 iterpc-0.3.3/iterpc/man/iterpc.Rd | 2 iterpc-0.3.3/iterpc/src/Makevars | 18 +-- iterpc-0.3.3/iterpc/src/combination.cpp | 18 +-- iterpc-0.3.3/iterpc/src/permutation.cpp | 18 +-- iterpc-0.3.3/iterpc/src/utils/combination.c |only iterpc-0.3.3/iterpc/src/utils/combination.h |only iterpc-0.3.3/iterpc/src/utils/k_permutation.c |only iterpc-0.3.3/iterpc/src/utils/k_permutation.h |only iterpc-0.3.3/iterpc/src/utils/multicombination.c |only iterpc-0.3.3/iterpc/src/utils/multicombination.h |only iterpc-0.3.3/iterpc/src/utils/multiset_combination.c |only iterpc-0.3.3/iterpc/src/utils/multiset_combination.h |only iterpc-0.3.3/iterpc/src/utils/n_tuple.c |only iterpc-0.3.3/iterpc/src/utils/n_tuple.h |only iterpc-0.3.3/iterpc/src/utils/permutation.c |only iterpc-0.3.3/iterpc/src/utils/permutation.h |only iterpc-0.3.3/iterpc/tests/testthat/test-combination.R | 8 + iterpc-0.3.3/iterpc/tests/testthat/test-permutation.R | 8 + 32 files changed, 82 insertions(+), 108 deletions(-)
Title: Semiparametric Competing Risks Regression under Interval
Censoring
Description: Semiparametric regression models for the cumulative incidence function with interval-censored competing risks data as described in Bakoyannis, Yu, & Yiannoutsos (2017) <doi:10.1002/sim.7350>. The main function fits the proportional subdistribution hazards model (Fine-Gray model), the proportional odds model, and other models that belong to the class of semiparametric generalized odds rate transformation models.
Author: Giorgos Bakoyannis <gbakogia@iu.edu>, Jun Park <jp84@iu.edu>
Maintainer: Jun Park <jp84@iu.edu>
Diff between intccr versions 0.1.0 dated 2017-08-30 and 0.2.0 dated 2017-09-12
intccr-0.1.0/intccr/R/bssmle_se_p.R |only intccr-0.1.0/intccr/man/bssmle_se_p.Rd |only intccr-0.2.0/intccr/DESCRIPTION | 21 +- intccr-0.2.0/intccr/MD5 | 40 ++-- intccr-0.2.0/intccr/NAMESPACE | 1 intccr-0.2.0/intccr/R/bssmle.R | 42 +++-- intccr-0.2.0/intccr/R/bssmle_se.R | 94 ++++++++--- intccr-0.2.0/intccr/R/ciregic.R | 198 +++++++++++------------- intccr-0.2.0/intccr/R/naive_b.R | 30 ++- intccr-0.2.0/intccr/R/simdat.R | 2 intccr-0.2.0/intccr/R/surv2.R | 18 +- intccr-0.2.0/intccr/data/simdat.rda |binary intccr-0.2.0/intccr/man/Surv2.Rd | 22 +- intccr-0.2.0/intccr/man/bssmle.Rd | 26 ++- intccr-0.2.0/intccr/man/bssmle_se.Rd | 28 ++- intccr-0.2.0/intccr/man/ciregic.Rd | 46 ++--- intccr-0.2.0/intccr/man/naive_b.Rd | 28 ++- intccr-0.2.0/intccr/man/predict.ciregic.Rd | 16 + intccr-0.2.0/intccr/man/simdat.Rd | 2 intccr-0.2.0/intccr/man/summary.ciregic.Rd | 10 - intccr-0.2.0/intccr/man/vcov.ciregic.Rd | 10 - intccr-0.2.0/intccr/man/vcov.summary.ciregic.Rd | 12 + 22 files changed, 385 insertions(+), 261 deletions(-)
Title: Statistical Procedures for Agricultural Research
Description: Original idea was presented in the thesis "A statistical analysis tool for agricultural research" to obtain the degree of Master on science, National Engineering University (UNI), Lima-Peru. Some experimental data for the examples come from the CIP and others research. Agricolae offers extensive functionality on experimental design especially for agricultural and plant breeding experiments, which can also be useful for other purposes. It supports planning of lattice, Alpha, Cyclic, Complete Block, Latin Square, Graeco-Latin Squares, augmented block, factorial, split and strip plot designs. There are also various analysis facilities for experimental data, e.g. treatment comparison procedures and several non-parametric tests comparison, biodiversity indexes and consensus cluster.
Author: Felipe de Mendiburu
Maintainer: Felipe de Mendiburu <fmendiburu@lamolina.edu.pe>
Diff between agricolae versions 1.2-7 dated 2017-09-01 and 1.2-8 dated 2017-09-12
DESCRIPTION | 8 ++++---- MD5 | 10 ++++++---- NEWS | 6 ++++++ R/order.group.R |only inst/doc/tutorial.pdf |binary man/agricolae-package.Rd | 4 ++-- man/order.group.Rd |only 7 files changed, 18 insertions(+), 10 deletions(-)
Title: Spatiotemporal Boundary Detection Model for Areal Unit Data
Description: Implements a spatiotemporal boundary detection model with a dissimilarity
metric for areal data with inference in a Bayesian setting using Markov chain
Monte Carlo (MCMC). The response variable can be modeled as Gaussian (no nugget),
probit or Tobit link and spatial correlation is introduced at each time point
through a conditional autoregressive (CAR) prior. Temporal correlation is introduced
through a hierarchical structure and can be specified as exponential or first-order
autoregressive. Full details of the package can be found in the accompanying vignette.
Author: Samuel I. Berchuck [aut, cre]
Maintainer: Samuel I. Berchuck <berchuck@ad.unc.edu>
Diff between womblR versions 1.0.1 dated 2017-07-17 and 1.0.2 dated 2017-09-12
DESCRIPTION | 8 +++--- MD5 | 18 ++++++------- NEWS.md | 6 ++++ R/RcppExports.R | 28 ++++++++++----------- inst/doc/womblR-example.R | 3 +- inst/doc/womblR-example.Rmd | 17 ++++++------ inst/doc/womblR-example.html | 23 +++++++++-------- src/DistributionFunctions.cpp | 3 +- src/RcppExports.cpp | 56 +++++++++++++++++++++--------------------- vignettes/womblR-example.Rmd | 17 ++++++------ 10 files changed, 95 insertions(+), 84 deletions(-)
Title: Simply Create LaTeX and HTML Tables
Description: Creates HTML and LaTeX tables. Provides similar
functionality to 'xtable', but does more, with a simpler interface.
Author: David Hugh-Jones
Maintainer: David Hugh-Jones <davidhughjones@gmail.com>
Diff between huxtable versions 0.3.0 dated 2017-05-18 and 0.3.1 dated 2017-09-12
huxtable-0.3.0/huxtable/inst/doc/design-principles.R |only huxtable-0.3.0/huxtable/inst/doc/design-principles.Rmd |only huxtable-0.3.0/huxtable/inst/doc/design-principles.html |only huxtable-0.3.0/huxtable/inst/doc/huxtable.R |only huxtable-0.3.0/huxtable/inst/doc/huxtable.Rmd |only huxtable-0.3.0/huxtable/inst/doc/huxtable.html |only huxtable-0.3.1/huxtable/DESCRIPTION | 10 - huxtable-0.3.1/huxtable/MD5 | 42 ++---- huxtable-0.3.1/huxtable/NAMESPACE | 9 + huxtable-0.3.1/huxtable/NEWS.md | 5 huxtable-0.3.1/huxtable/R/LaTeX.R | 2 huxtable-0.3.1/huxtable/R/attributes.R | 21 ++- huxtable-0.3.1/huxtable/R/huxreg.R | 5 huxtable-0.3.1/huxtable/R/huxtable.R | 7 - huxtable-0.3.1/huxtable/R/utils.R | 60 ++++++++ huxtable-0.3.1/huxtable/build/vignette.rds |binary huxtable-0.3.1/huxtable/inst/doc/huxreg.html | 8 - huxtable-0.3.1/huxtable/man/add_colnames.Rd | 3 huxtable-0.3.1/huxtable/man/huxtable.Rd | 3 huxtable-0.3.1/huxtable/man/insert_column.Rd |only huxtable-0.3.1/huxtable/man/latex_float.Rd |only huxtable-0.3.1/huxtable/tests/testthat/test-attributes.R | 26 ++- huxtable-0.3.1/huxtable/tests/testthat/test-object-manipulation.R | 24 +++ huxtable-0.3.1/huxtable/vignettes/comparison.csv | 69 +++++----- huxtable-0.3.1/huxtable/vignettes/design-principles.Rmd | 9 - huxtable-0.3.1/huxtable/vignettes/huxtable.Rmd | 49 +++++-- 26 files changed, 252 insertions(+), 100 deletions(-)
Title: Basic Sensitivity Analysis of Epidemiological Results
Description: Basic sensitivity analysis of the observed relative risks adjusting
for unmeasured confounding and misclassification of the
exposure/outcome, or both. It follows the bias analysis methods and
examples from the book by Lash T.L, Fox M.P, and Fink A.K.
"Applying Quantitative Bias Analysis to Epidemiologic Data",
('Springer', 2009).
Author: Denis Haine [aut, cre]
Maintainer: Denis Haine <denis.haine@gmail.com>
Diff between episensr versions 0.9.0 dated 2017-08-16 and 0.9.1 dated 2017-09-12
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- NEWS.md | 4 ++++ R/probsens.conf.R | 2 +- tests/testthat/test-probsens.R | 16 ++++++++++++++++ 5 files changed, 29 insertions(+), 9 deletions(-)
Title: Machine Learning Tools
Description: A collection of machine learning helper functions, particularly assisting in the Exploratory Data Analysis phase. Makes heavy use of the 'data.table' package for optimal speed and memory efficiency. Highlights include a versatile bin_data() function, sparsify() for converting a data.table to sparse matrix format with one-hot encoding, fast evaluation metrics, and empirical_cdf() for calculating empirical Multivariate Cumulative Distribution Functions.
Author: Ben Gorman
Maintainer: Ben Gorman <bgorman@GormAnalysis.com>
Diff between mltools versions 0.3.2 dated 2017-08-28 and 0.3.3 dated 2017-09-12
DESCRIPTION | 11 ++++------- MD5 | 6 +++--- NEWS.md | 8 +++++++- R/date_factor.R | 2 +- 4 files changed, 15 insertions(+), 12 deletions(-)
Title: Miscellaneous R Functions and Aliases
Description: Provides utility functions for, and drawing on, the 'data.table' package. The package also collates useful miscellaneous functions extending base R not available elsewhere. The name is a portmanteau of 'utils' and the author.
Author: Hugh Parsonage [aut, cre]
Maintainer: Hugh Parsonage <hugh.parsonage@gmail.com>
Diff between hutils versions 0.1.2 dated 2017-07-09 and 0.8.0 dated 2017-09-12
DESCRIPTION | 12 ++-- MD5 | 52 +++++++++++++---- NAMESPACE | 16 +++++ NEWS.md |only R/aliases.R |only R/coalesce.R |only R/drop_colr.R |only R/ein.R |only R/hutils-package.R | 1 R/if_else.R |only R/mutate_other.R | 110 +++++++++++++++++++++++++++---------- R/ngrep.R |only R/notin.R | 7 ++ R/select_which.R |only R/set_cols_first.R | 51 +++++++++++++---- R/weight2rows.R |only man/aliases.Rd |only man/coalesce.Rd |only man/drop_colr.Rd |only man/ein.Rd |only man/grapes-notin-grapes.Rd | 3 + man/if_else.Rd |only man/mutate_other.Rd | 21 ++++++- man/ngrep.Rd |only man/select_which.Rd |only man/set_cols_first.Rd | 27 ++++++--- man/weight2rows.Rd |only tests/testthat/test_aliases.R |only tests/testthat/test_coalesce.R |only tests/testthat/test_cols_first.R | 12 ++++ tests/testthat/test_dir.R | 1 tests/testthat/test_drop_colr.R |only tests/testthat/test_drop_cols.R | 10 +++ tests/testthat/test_ein.R |only tests/testthat/test_if_else.R |only tests/testthat/test_mutate_other.R | 36 +++++++++++- tests/testthat/test_ngrep.R |only tests/testthat/test_notin.R |only tests/testthat/test_select_which.R |only tests/testthat/test_weight2var.R |only 40 files changed, 290 insertions(+), 69 deletions(-)
Title: Plotting for Bayesian Models
Description: Plotting functions for posterior analysis, model checking,
and MCMC diagnostics. The package is designed not only to provide convenient
functionality for users, but also a common set of functions that can be
easily used by developers working on a variety of R packages for Bayesian
modeling, particularly (but not exclusively) packages interfacing with 'Stan'.
Author: Jonah Gabry [aut, cre],
Tristan Mahr [aut],
Paul-Christian Buerkner [ctb]
Maintainer: Jonah Gabry <jsg2201@columbia.edu>
Diff between bayesplot versions 1.3.0 dated 2017-08-07 and 1.4.0 dated 2017-09-12
bayesplot-1.3.0/bayesplot/inst/CITATION |only bayesplot-1.3.0/bayesplot/tests/testthat/test-mcmc-scatterplots.R |only bayesplot-1.4.0/bayesplot/DESCRIPTION | 15 bayesplot-1.4.0/bayesplot/MD5 | 107 +-- bayesplot-1.4.0/bayesplot/NAMESPACE | 19 bayesplot-1.4.0/bayesplot/NEWS.md | 25 bayesplot-1.4.0/bayesplot/R/bayesplot-package.R | 22 bayesplot-1.4.0/bayesplot/R/helpers-mcmc.R | 43 + bayesplot-1.4.0/bayesplot/R/helpers-ppc.R | 74 +- bayesplot-1.4.0/bayesplot/R/mcmc-diagnostics-nuts.R | 16 bayesplot-1.4.0/bayesplot/R/mcmc-diagnostics.R | 249 ++++--- bayesplot-1.4.0/bayesplot/R/mcmc-distributions.R | 8 bayesplot-1.4.0/bayesplot/R/mcmc-overview.R | 16 bayesplot-1.4.0/bayesplot/R/mcmc-parcoord.R |only bayesplot-1.4.0/bayesplot/R/mcmc-recover.R | 6 bayesplot-1.4.0/bayesplot/R/mcmc-scatterplots.R | 201 ++++-- bayesplot-1.4.0/bayesplot/R/mcmc-traces.R | 207 ++++-- bayesplot-1.4.0/bayesplot/R/ppc-intervals.R | 323 +++++----- bayesplot-1.4.0/bayesplot/R/ppc-loo.R | 37 - bayesplot-1.4.0/bayesplot/R/ppc-overview.R | 1 bayesplot-1.4.0/bayesplot/R/ppc-test-statistics.R | 17 bayesplot-1.4.0/bayesplot/R/zzz.R | 3 bayesplot-1.4.0/bayesplot/inst/doc/graphical-ppcs.R | 73 -- bayesplot-1.4.0/bayesplot/inst/doc/graphical-ppcs.Rmd | 240 +++---- bayesplot-1.4.0/bayesplot/inst/doc/graphical-ppcs.html | 176 +++-- bayesplot-1.4.0/bayesplot/inst/doc/plotting-mcmc-draws.R | 32 bayesplot-1.4.0/bayesplot/inst/doc/plotting-mcmc-draws.Rmd | 205 +++++- bayesplot-1.4.0/bayesplot/inst/doc/plotting-mcmc-draws.html | 203 ++++-- bayesplot-1.4.0/bayesplot/inst/doc/visual-mcmc-diagnostics.R | 21 bayesplot-1.4.0/bayesplot/inst/doc/visual-mcmc-diagnostics.Rmd | 146 +++- bayesplot-1.4.0/bayesplot/inst/doc/visual-mcmc-diagnostics.html | 182 +++-- bayesplot-1.4.0/bayesplot/man/MCMC-combos.Rd | 3 bayesplot-1.4.0/bayesplot/man/MCMC-diagnostics.Rd | 17 bayesplot-1.4.0/bayesplot/man/MCMC-distributions.Rd | 9 bayesplot-1.4.0/bayesplot/man/MCMC-intervals.Rd | 2 bayesplot-1.4.0/bayesplot/man/MCMC-nuts.Rd | 18 bayesplot-1.4.0/bayesplot/man/MCMC-overview.Rd | 21 bayesplot-1.4.0/bayesplot/man/MCMC-parcoord.Rd |only bayesplot-1.4.0/bayesplot/man/MCMC-recover.Rd | 7 bayesplot-1.4.0/bayesplot/man/MCMC-scatterplots.Rd | 105 ++- bayesplot-1.4.0/bayesplot/man/MCMC-traces.Rd | 91 +- bayesplot-1.4.0/bayesplot/man/PPC-intervals.Rd | 25 bayesplot-1.4.0/bayesplot/man/PPC-loo.Rd | 16 bayesplot-1.4.0/bayesplot/man/PPC-overview.Rd | 4 bayesplot-1.4.0/bayesplot/man/PPC-test-statistics.Rd | 12 bayesplot-1.4.0/bayesplot/man/bayesplot-package.Rd | 23 bayesplot-1.4.0/bayesplot/tests/testthat.R | 3 bayesplot-1.4.0/bayesplot/tests/testthat/Rplots.pdf |binary bayesplot-1.4.0/bayesplot/tests/testthat/test-mcmc-diagnostics.R | 15 bayesplot-1.4.0/bayesplot/tests/testthat/test-mcmc-scatter-and-parcoord.R |only bayesplot-1.4.0/bayesplot/tests/testthat/test-mcmc-traces.R | 38 - bayesplot-1.4.0/bayesplot/tests/testthat/test-ppc-intervals.R | 39 - bayesplot-1.4.0/bayesplot/tests/testthat/test-ppc-loo.R | 1 bayesplot-1.4.0/bayesplot/vignettes/children/SETTINGS-knitr.txt | 3 bayesplot-1.4.0/bayesplot/vignettes/graphical-ppcs.Rmd | 240 +++---- bayesplot-1.4.0/bayesplot/vignettes/plotting-mcmc-draws.Rmd | 205 +++++- bayesplot-1.4.0/bayesplot/vignettes/visual-mcmc-diagnostics.Rmd | 146 +++- 57 files changed, 2433 insertions(+), 1277 deletions(-)
Title: Datasets for the R/qtl Book
Description: Datasets for the book, A Guide to QTL Mapping with R/qtl.
Author: Karl W Broman <kbroman@biostat.wisc.edu>
Maintainer: Karl W Broman <kbroman@biostat.wisc.edu>
Diff between qtlbook versions 0.18-5 dated 2016-05-22 and 0.18-6 dated 2017-09-12
DESCRIPTION | 8 ++++---- MD5 | 26 +++++++++++++------------- README.md | 4 ++-- data/ch3a.RData |binary data/ch3b.RData |binary data/ch3c.RData |binary data/gutlength.RData |binary data/iron.RData |binary data/myocard.RData |binary data/nf1.RData |binary data/ovar.RData |binary data/trout.RData |binary inst/README.md | 4 ++-- man/ch3c.Rd | 12 ++++++------ 14 files changed, 27 insertions(+), 27 deletions(-)
Title: Analysis of Visual Meteor Data
Description: Functions for selection of visual meteor data, calculations of Zenithal Hourly Rate (ZHR) and population index, graphics of population index, ZHR and magnitude distribution.
Author: Kristina Veljkovic
Maintainer: Kristina Veljkovic <mackikac@gmail.com>
Diff between MetFns versions 3.0.0 dated 2017-08-18 and 3.0.1 dated 2017-09-12
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- R/pop.index.plot.R | 2 +- R/zhr.plot.R | 2 +- man/MetFns-package.Rd | 4 ++-- 5 files changed, 12 insertions(+), 12 deletions(-)
Title: Freshing Up your 'ggplot2' Plots
Description: Functions for working with legends and axis lines of 'ggplot2',
facets that repeat axis lines on all panels, and some 'knitr' extensions.
Author: Stefan McKinnon Edwards [aut, ctb, cre],
Baptiste Auguie [ctb] (For g_legend and grid_arrange_shared_legend),
Shaun Jackman [ctb] (For grid_arrange_shared_legend),
Hadley Wickham [ctb] (ggplot2 functions),
Winston Chang [ctb] (ggplot2 functions)
Maintainer: Stefan McKinnon Edwards <sme@iysik.com>
Diff between lemon versions 0.3.0 dated 2017-05-22 and 0.3.1 dated 2017-09-12
DESCRIPTION | 10 ++--- MD5 | 65 +++++++++++++++++----------------- R/legends.r | 30 +++++++++++++--- R/lemon_print.r | 3 + build/vignette.rds |binary inst/doc/capped-axes.Rmd | 2 - inst/doc/capped-axes.html | 30 ++++++++-------- inst/doc/gtable_show_lemonade.Rmd | 4 +- inst/doc/gtable_show_lemonade.html | 16 ++++---- inst/doc/legends.R | 13 ++++++ inst/doc/legends.Rmd | 38 +++++++++++++++++++- inst/doc/legends.html | 69 +++++++++++++++++++++++++------------ inst/doc/lemon_print.Rmd | 4 +- inst/doc/lemon_print.html | 6 +-- man/brackets.Rd | 1 man/coord_capped.Rd | 5 +- man/coord_flex.Rd | 4 +- man/dot.Rd | 1 man/facet_rep.Rd | 1 man/g_legend.Rd | 7 +-- man/ggplot2-non-exports.Rd | 7 +-- man/grid_arrange_shared_legend.Rd | 7 +-- man/gtable_show.Rd | 1 man/is.small.Rd | 1 man/lemon-ggproto.Rd | 8 ++-- man/lemon.Rd | 11 +++++ man/lemon_print.Rd | 5 ++ man/remove_labels_from_axis.Rd | 1 man/reposition_legend.Rd | 24 +++++++++--- vignettes/capped-axes.Rmd | 2 - vignettes/ggext-lemon.png |only vignettes/gtable_show_lemonade.Rmd | 4 +- vignettes/legends.Rmd | 38 +++++++++++++++++++- vignettes/lemon_print.Rmd | 4 +- 34 files changed, 284 insertions(+), 138 deletions(-)
Title: Multivariate Nonparametric Methods Based on Spatial Signs and
Ranks
Description: Test and estimates of location, tests of independence, tests of sphericity and several estimates of shape all based on spatial signs, symmetrized signs, ranks and signed ranks. For details, see Oja and Randles (2004) <doi:10.1214/088342304000000558> and Oja (2010) <doi:10.1007/978-1-4419-0468-3>.
Author: Seija Sirkia, Jari Miettinen, Klaus Nordhausen, Hannu Oja, Sara Taskinen
Maintainer: Jari Miettinen <jari.p.miettinen@aalto.fi>
Diff between SpatialNP versions 1.1-1 dated 2013-10-31 and 1.1-2 dated 2017-09-12
DESCRIPTION | 19 ++++------- MD5 | 11 +++--- NAMESPACE | 3 + R/signrankinternals.R | 20 ++++++------ man/SpatialNP-package.Rd | 78 ++++++++++++++++++++++------------------------- src/init.c |only src/spatialnp.cpp | 4 +- 7 files changed, 66 insertions(+), 69 deletions(-)
Title: Classical, Reloaded and Adaptive FastICA Algorithms
Description: Algorithms for classical symmetric and deflation-based FastICA, reloaded deflation-based FastICA algorithm and an algorithm for adaptive deflation-based FastICA using multiple nonlinearities. For details, see Miettinen et al. (2014) <doi:10.1109/TSP.2014.2356442> and Miettinen et al. (2017) <doi:10.1016/j.sigpro.2016.08.028>.
Author: Jari Miettinen, Klaus Nordhausen, Hannu Oja, Sara Taskinen
Maintainer: Jari Miettinen <jari.p.miettinen@aalto.fi>
Diff between fICA versions 1.0-3 dated 2015-08-17 and 1.1-0 dated 2017-09-12
DESCRIPTION | 12 - MD5 | 25 +- NAMESPACE | 5 R/adapt_fICA.R | 248 +++++++++++++--------------- R/fICA.R | 440 ++++++++++++++++++++++++++++++-------------------- R/internals.R | 153 ++++++++--------- R/reloaded_fICA.R | 347 +++++++++++++++++++-------------------- inst/ChangeLog | 48 +++-- man/compute_alphas.Rd | 10 - man/fICA-package.Rd | 53 +++--- man/fICA.Rd | 31 +-- src/Makevars | 3 src/Makevars.win | 2 src/init.c |only 14 files changed, 745 insertions(+), 632 deletions(-)
Title: Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing
Matrix Estimates
Description: Functions to compute the asymptotic covariance matrices of mixing and unmixing matrix estimates of the following blind source separation (BSS) methods: symmetric and squared symmetric FastICA, regular and adaptive deflation-based FastICA, FOBI, JADE, AMUSE and deflation-based and symmetric SOBI. Also functions to estimate these covariances based on data are available. For details, see Miettinen et al. (2015) <doi:10.1214/15-STS520>, Miettinen et al. (2016) <doi:10.1111/jtsa.12159>, Miettinen et al. (2017) <doi:10.1016/j.sigpro.2016.08.028>, Miettinen et al. (2017) <doi:10.18637/jss.v076.i02>, and references therein.
Author: Jari Miettinen, Klaus Nordhausen, Hannu Oja, Sara Taskinen
Maintainer: Jari Miettinen <jari.p.miettinen@aalto.fi>
Diff between BSSasymp versions 1.2-0 dated 2017-01-09 and 1.2-1 dated 2017-09-12
BSSasymp-1.2-0/BSSasymp/R/FastICA_ascov2.R |only BSSasymp-1.2-1/BSSasymp/DESCRIPTION | 12 ++-- BSSasymp-1.2-1/BSSasymp/MD5 | 14 ++--- BSSasymp-1.2-1/BSSasymp/NAMESPACE | 2 BSSasymp-1.2-1/BSSasymp/inst/ChangeLog | 34 +++++++------ BSSasymp-1.2-1/BSSasymp/man/ASCOV_SOBI.Rd | 22 ++++---- BSSasymp-1.2-1/BSSasymp/man/BSSasymp-package.Rd | 62 ++++++++++++------------ BSSasymp-1.2-1/BSSasymp/man/aSOBI.Rd | 2 BSSasymp-1.2-1/BSSasymp/src/init.c |only 9 files changed, 77 insertions(+), 71 deletions(-)
Title: ILO Open Data via Ilostat Bulk Download Facility or SDMX Web
Service
Description: Tools to download data from the ilostat database
<http://www.ilo.org/ilostat> together with search and
manipulation utilities.
Author: ILO Department of Statistics [cph, fnd],
David Bescond [aut, cre],
Rosina Gammarano [ctr]
Maintainer: David Bescond <bescond@ilo.org>
Diff between Rilostat versions 0.1 dated 2017-08-30 and 0.2 dated 2017-09-12
Rilostat-0.1/Rilostat/tests/testthat.R |only Rilostat-0.2/Rilostat/DESCRIPTION | 12 Rilostat-0.2/Rilostat/MD5 | 11 Rilostat-0.2/Rilostat/NEWS | 10 Rilostat-0.2/Rilostat/R/sdmx_ilostat.R | 1078 ++++++++++++++++----------------- Rilostat-0.2/Rilostat/R/utils.R | 278 +++----- Rilostat-0.2/Rilostat/README.md | 4 7 files changed, 665 insertions(+), 728 deletions(-)
Title: Predictive Approaches in Psychology
Description: Recent years have seen an increased interest in novel methods
for analyzing quantitative data from experimental psychology. Currently, however, they lack an
established and accessible software framework. Many existing implementations provide no guidelines,
consisting of small code snippets, or sets of packages. In addition, the use of existing packages
often requires advanced programming experience. 'PredPsych' is a user-friendly toolbox based on
machine learning predictive algorithms. It comprises of multiple functionalities for multivariate
analyses of quantitative behavioral data based on machine learning models.
Author: Atesh Koul
Maintainer: Atesh Koul <atesh.koul@gmail.com>
Diff between PredPsych versions 0.2 dated 2017-06-26 and 0.3 dated 2017-09-12
DESCRIPTION | 8 +-- MD5 | 18 +++---- R/ClassPerm.R | 4 - R/DTModel.R | 132 +++++++++++++++++++++++++++++------------------------ R/LinearDA.R | 59 +++++++++++++---------- R/classifyFun.R | 72 ++++++++++++++++------------ man/ClassPerm.Rd | 4 - man/DTModel.Rd | 30 ++++-------- man/LinearDA.Rd | 13 ++--- man/classifyFun.Rd | 20 +++----- 10 files changed, 192 insertions(+), 168 deletions(-)
Title: Multivariate Dose-Response Meta-Analysis
Description: Estimates dose-response relations from summarized dose-response
data and to combines them according to principles of (multivariate)
random-effects models.
Author: Alessio Crippa [aut, cre]
Maintainer: Alessio Crippa <alessio.crippa@ki.se>
Diff between dosresmeta versions 2.0.0 dated 2017-08-17 and 2.0.1 dated 2017-09-12
DESCRIPTION | 25 MD5 | 30 NAMESPACE | 1 R/additional.R | 37 + R/dosresmeta-package.R | 9 R/dosresmeta.R | 1488 +++++++++++++++++++++++----------------------- R/methods.R | 32 R/undocumented.R | 19 README.md |only build |only inst/doc |only man/dosresmeta-package.Rd | 7 man/dosresmeta.Rd | 2 man/dosresmeta.control.Rd | 2 man/fpgrid.Rd |only man/predict.dosresmeta.Rd | 32 vignettes |only 17 files changed, 891 insertions(+), 793 deletions(-)
Title: Fit, Simulate and Diagnose Models for Network Evolution Based on
Exponential-Family Random Graph Models
Description: An integrated set of extensions to the 'ergm' package to analyze and simulate network evolution based on exponential-family random graph models (ERGM). 'tergm' is a part of the 'statnet' suite of packages for network analysis.
Author: Pavel N. Krivitsky [aut, cre],
Mark S. Handcock [aut, ths],
David R. Hunter [ctb],
Steven M. Goodreau [ctb, ths],
Martina Morris [ctb, ths],
Nicole Bohme Carnegie [ctb],
Carter T. Butts [ctb],
Ayn Leslie-Cook [ctb],
Skye Bender-deMoll [ctb],
Li Wang [ctb],
Kirk Li [ctb]
Maintainer: Pavel N. Krivitsky <pavel@uow.edu.au>
Diff between tergm versions 3.4.0 dated 2016-03-28 and 3.4.1 dated 2017-09-12
DESCRIPTION | 11 +- LICENSE | 2 MD5 | 166 +++++++++++++++---------------- NAMESPACE | 1 R/InitConstraint.R | 2 R/InitErgmTerm.duration.R | 2 R/InitMHP.DynMLE.R | 2 R/InitMHP.DynMLE.blockdiag.R | 2 R/InitMHP.DynMoME.R | 2 R/coef.stergm.R | 2 R/combine.networks.R | 2 R/control.logLik.stergm.R | 4 R/control.simulate.stergm.R | 6 - R/control.stergm.R | 4 R/ergm.godfather.R | 6 - R/gof.stergm.R | 2 R/impute.network.list.R | 2 R/is.lasttoggle.R | 2 R/logLik.stergm.R | 4 R/mcmc.diagnostics.stergm.R | 2 R/print.stergm.R | 2 R/simulate.stergm.R | 6 - R/stergm.CMLE.R | 2 R/stergm.EGMME.GD.R | 2 R/stergm.EGMME.R | 2 R/stergm.EGMME.SA.R | 2 R/stergm.EGMME.initialfit.R | 2 R/stergm.R | 4 R/stergm.getMCMCsample.R | 96 ++++++++++------- R/stergm.utils.R | 2 R/summary.statistics.networkDynamic.R | 2 R/summary.stergm.R | 2 R/zzz.R | 2 README.md |only build/vignette.rds |binary inst/CITATION | 2 inst/NEWS.Rd | 64 ++++++++--- inst/doc/STERGM.pdf |binary man/coef.stergm.Rd | 2 man/control.simulate.stergm.Rd | 2 man/control.stergm.Rd | 2 man/ergm-constraints.Rd | 2 man/ergm-terms.Rd | 2 man/gof.stergm.Rd | 2 man/impute.network.list.Rd | 2 man/logLik.stergm.Rd | 2 man/mcmc.diagnostics.stergm.Rd | 2 man/print.stergm.Rd | 2 man/simulate.stergm.Rd | 2 man/stergm.Rd | 2 man/stergm.getMCMCsample.Rd | 64 ++++++----- man/summary.statistics.networkDynamic.Rd | 2 man/tergm-internal.Rd | 2 man/tergm-package.Rd | 2 man/tergm.godfather.Rd | 2 man/tergm_MH_proposals.Rd | 9 + src/DynSA.c | 2 src/DynSA.h | 2 src/MCMCDyn.c | 15 ++ src/MCMCDyn.h | 2 src/MHproposals_DynMLE.c | 2 src/MHproposals_DynMLE.h | 2 src/MHproposals_DynMLE_block.c | 2 src/MHproposals_DynMLE_block.h | 2 src/MHproposals_DynMoME.c | 2 src/MHproposals_DynMoME.h | 2 src/changestats_duration.c | 2 src/changestats_duration.h | 2 src/godfather.c | 2 src/godfather.h | 2 src/include_stubs.c | 2 src/init.c |only tests/combine.networks.R | 9 + tests/degree.mean.age.R | 2 tests/dynamic_EGMME.R | 2 tests/dynamic_EGMME.simple.R | 2 tests/dynamic_MLE.R | 2 tests/dynamic_MLE_2.R | 2 tests/dynamic_MLE_blockdiag.R | 2 tests/dynamic_MLE_blockdiag.bipartite.R | 2 tests/requireNamespaceTest.R | 9 + tests/sim_gf_sum.R | 2 tests/simulate_networkDynamic.R | 2 tests/tergm_offset_tests.R | 2 tests/tergm_parallel.R | 2 85 files changed, 347 insertions(+), 259 deletions(-)
Title: Automatic Forecasting Procedure
Description: Implements a procedure for forecasting time series data based on
an additive model where non-linear trends are fit with yearly and weekly
seasonality, plus holidays. It works best with daily periodicity data with
at least one year of historical data. Prophet is robust to missing data,
shifts in the trend, and large outliers.
Author: Sean Taylor [cre, aut],
Ben Letham [aut]
Maintainer: Sean Taylor <sjt@fb.com>
Diff between prophet versions 0.1.1 dated 2017-04-19 and 0.2 dated 2017-09-12
prophet-0.1.1/prophet/man/plot_holidays.Rd |only prophet-0.1.1/prophet/man/plot_trend.Rd |only prophet-0.2/prophet/DESCRIPTION | 19 prophet-0.2/prophet/MD5 | 88 - prophet-0.2/prophet/NAMESPACE | 6 prophet-0.2/prophet/R/diagnostics.R |only prophet-0.2/prophet/R/prophet.R | 971 ++++++++++--- prophet-0.2/prophet/inst/doc/quick_start.html | 56 prophet-0.2/prophet/inst/stan/prophet_linear_growth.stan | 4 prophet-0.2/prophet/inst/stan/prophet_logistic_growth.stan | 4 prophet-0.2/prophet/man/add_group_component.Rd |only prophet-0.2/prophet/man/add_regressor.Rd |only prophet-0.2/prophet/man/add_seasonality.Rd |only prophet-0.2/prophet/man/compile_stan_model.Rd | 1 prophet-0.2/prophet/man/cross_validation.Rd |only prophet-0.2/prophet/man/df_for_plotting.Rd | 1 prophet-0.2/prophet/man/fourier_series.Rd | 1 prophet-0.2/prophet/man/generate_cutoffs.Rd |only prophet-0.2/prophet/man/get_changepoint_matrix.Rd | 1 prophet-0.2/prophet/man/get_prophet_stan_model.Rd | 1 prophet-0.2/prophet/man/initialize_scales_fn.Rd |only prophet-0.2/prophet/man/linear_growth_init.Rd | 1 prophet-0.2/prophet/man/logistic_growth_init.Rd | 1 prophet-0.2/prophet/man/make_all_seasonality_features.Rd | 13 prophet-0.2/prophet/man/make_future_dataframe.Rd | 4 prophet-0.2/prophet/man/make_holiday_features.Rd | 5 prophet-0.2/prophet/man/make_seasonality_features.Rd | 1 prophet-0.2/prophet/man/parse_seasonality_args.Rd |only prophet-0.2/prophet/man/piecewise_linear.Rd | 1 prophet-0.2/prophet/man/piecewise_logistic.Rd | 1 prophet-0.2/prophet/man/plot_forecast_component.Rd |only prophet-0.2/prophet/man/plot_seasonality.Rd |only prophet-0.2/prophet/man/plot_weekly.Rd | 1 prophet-0.2/prophet/man/plot_yearly.Rd | 1 prophet-0.2/prophet/man/predict_seasonal_components.Rd | 5 prophet-0.2/prophet/man/predict_trend.Rd | 1 prophet-0.2/prophet/man/predict_uncertainty.Rd | 5 prophet-0.2/prophet/man/predictive_samples.Rd |only prophet-0.2/prophet/man/prophet.Rd | 36 prophet-0.2/prophet/man/prophet_copy.Rd |only prophet-0.2/prophet/man/sample_model.Rd | 1 prophet-0.2/prophet/man/sample_posterior_predictive.Rd |only prophet-0.2/prophet/man/sample_predictive_trend.Rd | 1 prophet-0.2/prophet/man/seasonality_plot_df.Rd |only prophet-0.2/prophet/man/set_auto_seasonalities.Rd | 3 prophet-0.2/prophet/man/set_changepoints.Rd | 1 prophet-0.2/prophet/man/set_date.Rd |only prophet-0.2/prophet/man/setup_dataframe.Rd | 4 prophet-0.2/prophet/man/simulated_historical_forecasts.Rd |only prophet-0.2/prophet/man/time_diff.Rd |only prophet-0.2/prophet/man/validate_column_name.Rd |only prophet-0.2/prophet/man/validate_inputs.Rd | 1 prophet-0.2/prophet/src/Makevars.win | 2 prophet-0.2/prophet/tests/testthat/data2.csv |only prophet-0.2/prophet/tests/testthat/test_diagnostics.R |only prophet-0.2/prophet/tests/testthat/test_prophet.R | 375 ++++- 56 files changed, 1287 insertions(+), 330 deletions(-)
Title: Simulation and Parameter Estimation of Randomized Sierpinski
Carpets using the p-p-p-q-Model
Description: The parameters p and q are estimated with the aid of a randomized Sierpinski Carpet which is built on a [p-p-p-q]-model. Thereby, for three times a simulation with a p-value and once with a q-value is assumed. Hence, these parameters are estimated and displayed. Moreover, functions for simulating random Sierpinski-Carpets with constant and variable probabilities are included.
Author: Philipp Hermann, Jozef Kiselak, Milan Stehlik
Maintainer: Philipp Hermann <philipp.hermann@jku.at>
Diff between FractalParameterEstimation versions 1.1 dated 2017-08-02 and 1.1.1 dated 2017-09-12
DESCRIPTION | 17 ++++++++------- MD5 | 22 ++++++++++---------- man/FractalParameterEstimation-package.Rd | 32 +++++++++++++++++++++++------- man/GSC.Rd | 4 +-- man/GSC_seq.Rd | 6 +++-- man/calcRamification.Rd | 6 +++-- man/createSmallerMatrix.Rd | 7 ++++-- man/estimationFunction.Rd | 7 ++++-- man/fillMatrix.Rd | 7 ++++-- man/increment.Rd | 7 ++++-- man/potence.Rd | 9 +++++--- man/simMatrix.Rd | 6 +++-- 12 files changed, 85 insertions(+), 45 deletions(-)
More information about FractalParameterEstimation at CRAN
Permanent link
Title: Learning Sparse Bayesian Networks from High-Dimensional Data
Description: Fast methods for learning sparse Bayesian networks from high-dimensional data using sparse regularization, as described in Aragam, Gu, and Zhou (2017) <arXiv:1703.04025>. Designed to handle mixed experimental and observational data with thousands of variables with either continuous or discrete observations.
Author: Bryon Aragam [aut, cre],
Jiaying Gu [aut],
Dacheng Zhang [aut],
Qing Zhou [aut]
Maintainer: Bryon Aragam <sparsebn@gmail.com>
Diff between sparsebn versions 0.0.4 dated 2017-03-15 and 0.0.5 dated 2017-09-12
DESCRIPTION | 26 +++++-- MD5 | 38 ++++++----- NEWS.md | 9 ++ R/data.R | 56 ++++++++++++----- R/sparsebn-main.R | 23 ++++++ R/sparsebn-plotting.R | 1 R/zzz.R | 2 README.md | 18 +++-- build/vignette.rds |binary data/cytometryContinuous.rda |binary data/cytometryDiscrete.rda |binary inst/doc/sparsebn-vignette.html | 54 ++++++++-------- man/cytometryContinuous.Rd | 13 +++ man/cytometryDiscrete.Rd | 14 +++- man/estimate.dag.Rd | 18 ++++- man/pathfinder.Rd | 31 +++++---- tests/testthat/Rplots.pdf |binary tests/testthat/helper-sparsebnUtils-generate_objects.R | 6 + tests/testthat/test-bwlist.R |only tests/testthat/test-cytometry.R |only tests/testthat/test-dag.R | 45 +++++++++++++ 21 files changed, 255 insertions(+), 99 deletions(-)
Title: Power/Sample Size Calculation for Mediation Analysis
Description: Functions to
calculate power and sample size for testing
(1) mediation effects;
(2) the slope in a simple linear regression;
(3) odds ratio in a simple logistic regression;
(4) mean change for longitudinal study with 2 time points;
(5) interaction effect in 2-way ANOVA; and
(6) the slope in a simple Poisson regression.
Author: Weiliang Qiu <stwxq@channing.harvard.edu>
Maintainer: Weiliang Qiu <stwxq@channing.harvard.edu>
Diff between powerMediation versions 0.2.7 dated 2017-02-16 and 0.2.8 dated 2017-09-12
DESCRIPTION | 8 ++-- MD5 | 70 ++++++++++++++++++------------------ NEWS | 7 +++ man/SSizeLogisticBin.Rd | 9 +++- man/SSizeLogisticCon.Rd | 9 +++- man/minEffect.SLR.Rd | 21 ++++++---- man/minEffect.VSMc.Rd | 4 +- man/minEffect.VSMc.cox.Rd | 5 ++ man/minEffect.VSMc.logistic.Rd | 4 +- man/minEffect.VSMc.poisson.Rd | 4 +- man/power.SLR.Rd | 4 +- man/power.SLR.rho.Rd | 4 +- man/powerInteract.Rd | 9 +++- man/powerLogisticBin.Rd | 9 +++- man/powerLogisticCon.Rd | 9 +++- man/powerLong.Rd | 9 +++- man/powerLong.multiTime.Rd | 9 +++- man/powerLongFull.Rd | 9 +++- man/powerMediation.Sobel.Rd | 4 +- man/powerMediation.VSMc.Rd | 5 ++ man/powerMediation.VSMc.cox.Rd | 4 +- man/powerMediation.VSMc.logistic.Rd | 4 +- man/powerMediation.VSMc.poisson.Rd | 4 +- man/powerPoisson.Rd | 56 +++++++++++++++------------- man/sizePoisson.Rd | 61 ++++++++++++++++--------------- man/ss.SLR.Rd | 4 +- man/ss.SLR.rho.Rd | 4 +- man/ssLong.Rd | 9 +++- man/ssLong.multiTime.Rd | 9 +++- man/ssLongFull.Rd | 8 ++-- man/ssMediation.Sobel.Rd | 4 +- man/ssMediation.VSMc.Rd | 4 +- man/ssMediation.VSMc.cox.Rd | 4 +- man/ssMediation.VSMc.logistic.Rd | 4 +- man/ssMediation.VSMc.poisson.Rd | 4 +- man/testMediation.Sobel.Rd | 4 +- 36 files changed, 244 insertions(+), 155 deletions(-)
More information about powerMediation at CRAN
Permanent link
Title: A Universal Foreach Parallel Adaptor using the Future API of the
'future' Package
Description: Provides a '%dopar%' adaptor such that any type of futures can
be used as backends for the 'foreach' framework.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Diff between doFuture versions 0.5.0 dated 2017-04-01 and 0.5.1 dated 2017-09-12
DESCRIPTION | 10 +++++----- MD5 | 26 +++++++++++++------------- NAMESPACE | 1 + NEWS | 15 +++++++++++++++ R/doFuture.R | 3 +-- R/utils.R | 5 ----- build/vignette.rds |binary inst/doc/doFuture.html | 8 ++++---- inst/doc/doFuture.md.rsp | 17 ++++++----------- tests/doRNG,dopar.R | 7 ------- tests/doRNG,dorng.R | 8 +------- tests/future.BatchJobs.R | 7 +++++++ tests/future.batchtools.R | 6 ++++++ vignettes/doFuture.md.rsp | 17 ++++++----------- 14 files changed, 65 insertions(+), 65 deletions(-)
Title: Text Mining of PubMed Abstracts
Description: Text mining of PubMed Abstracts (text and XML) from <http://www.ncbi.nlm.nih.gov/pubmed>.
Author: Jyoti Rani, S.Ramachandran, Ab Rauf Shah
Maintainer: S. Ramachandran <ramuigib@gmail.com>
Diff between pubmed.mineR versions 1.0.10 dated 2017-07-03 and 1.0.11 dated 2017-09-12
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- R/uniprotfun.R | 2 +- 3 files changed, 7 insertions(+), 7 deletions(-)
Title: An Installation Framework for Shiny Apps
Description: Installs shiny apps using Inno Setup, an open source software that builds installers for Windows programs <http://www.jrsoftware.org/ishelp/>.
Author: Jon Hill [aut, cre, cph],
W. Lee Pang [aut, cph] (DesktopDeployR project at
https://github.com/wleepang/DesktopDeployR),
Hanjo Odendaal [ctb]
Maintainer: Jon Hill <jon.mark.hill@gmail.com>
Diff between RInno versions 0.1.0 dated 2017-08-18 and 0.1.1 dated 2017-09-12
DESCRIPTION | 6 +-- MD5 | 50 ++++++++++++------------- NEWS.md | 8 +++- R/copy_installation.R | 2 - R/create_app.R | 13 +++--- R/create_config.R | 8 ++-- R/files.R | 3 + R/icons.R | 14 ++++++- R/setup.R | 54 +++++++++++++++++++++++---- R/start_iss.R | 2 - inst/doc/Introduction.html | 4 +- inst/doc/cont-installation.R | 6 +-- inst/doc/cont-installation.Rmd | 23 +++++------ inst/doc/cont-installation.html | 27 ++++++------- inst/installation/code.iss | 61 +++++++++++++++++++++++++++++++ inst/installation/ensure.R | 27 ------------- inst/installation/get_app_from_app_url.R | 30 +++++++-------- inst/installation/package_manager.R | 2 - man/create_app.Rd | 1 man/create_config.Rd | 8 ++-- man/icons.Rd | 8 ++-- man/setup.Rd | 13 ++++-- man/start_iss.Rd | 2 - tests/testthat/test_icons.R | 2 - tests/testthat/test_setup.R | 2 - vignettes/cont-installation.Rmd | 23 +++++------ 26 files changed, 246 insertions(+), 153 deletions(-)