Title: Cubic Spline Fitting with Knot Selection
Description: Cubic spline fitting along with knot selection, includes support for additional variables.
Author: Eric Golinko
Maintainer: Eric Golinko <egolinko@gmail.com>
Diff between Kpart versions 1.2.0 dated 2016-07-24 and 1.2.1 dated 2017-10-19
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- R/part.R | 20 +++++++++++--------- man/Kpart-package.Rd | 2 +- man/part.Rd | 4 ++-- 5 files changed, 22 insertions(+), 20 deletions(-)
Title: Data for an Introduction to Statistical Learning with
Applications in R
Description: We provide the collection of data-sets used in the book 'An Introduction to Statistical Learning with Applications in R'.
Author: Gareth James, Daniela Witten, Trevor Hastie and Rob Tibshirani
Maintainer: Trevor Hastie <hastie@stanford.edu>
Diff between ISLR versions 1.1 dated 2017-08-10 and 1.2 dated 2017-10-19
DESCRIPTION | 8 ++++---- MD5 | 6 ++++-- data/Credit.rda |only data/datalist | 1 + man/Credit.Rd |only 5 files changed, 9 insertions(+), 6 deletions(-)
Title: Markov-Switching GARCH Models
Description: Fit (by Maximum Likelihood or MCMC/Bayesian), simulate, and forecast various Markov-Switching GARCH models as described in Ardia et al. (2017) <https://ssrn.com/abstract=2845809>.
Author: David Ardia [aut],
Keven Bluteau [aut, cre],
Kris Boudt [ctb],
Leopoldo Catania [aut],
Brian Peterson [ctb],
Denis-Alexandre Trottier [aut]
Maintainer: Keven Bluteau <Keven.Bluteau@unine.ch>
Diff between MSGARCH versions 1.1 dated 2017-09-14 and 1.2 dated 2017-10-19
MSGARCH-1.1/MSGARCH/R/PIT.R |only MSGARCH-1.1/MSGARCH/R/TransMat.R |only MSGARCH-1.1/MSGARCH/R/print.R |only MSGARCH-1.1/MSGARCH/inst/test/figure1.pdf |only MSGARCH-1.1/MSGARCH/inst/test/figure2.pdf |only MSGARCH-1.1/MSGARCH/inst/test/figure3.pdf |only MSGARCH-1.1/MSGARCH/inst/test/figure4.pdf |only MSGARCH-1.1/MSGARCH/inst/test/figure5.pdf |only MSGARCH-1.1/MSGARCH/inst/test/sink_PART_II_R3.4.1_mingw32.txt |only MSGARCH-1.1/MSGARCH/inst/test/sink_PART_II_R3.5.0_mingw32.txt |only MSGARCH-1.1/MSGARCH/inst/test/sink_PART_I_R3.4.1_mingw32.txt |only MSGARCH-1.1/MSGARCH/inst/test/sink_PART_I_R3.5.0_mingw32.txt |only MSGARCH-1.2/MSGARCH/DESCRIPTION | 16 +- MSGARCH-1.2/MSGARCH/MD5 | 66 ++++------ MSGARCH-1.2/MSGARCH/NAMESPACE | 1 MSGARCH-1.2/MSGARCH/NEWS | 7 + MSGARCH-1.2/MSGARCH/R/FitMCMC.R | 11 - MSGARCH-1.2/MSGARCH/R/FitML.R | 2 MSGARCH-1.2/MSGARCH/R/Inference.R | 16 -- MSGARCH-1.2/MSGARCH/R/MSGARCH.R | 2 MSGARCH-1.2/MSGARCH/R/ParameterTransformation.R | 2 MSGARCH-1.2/MSGARCH/R/Pit.R |only MSGARCH-1.2/MSGARCH/R/Posterior.R | 5 MSGARCH-1.2/MSGARCH/R/Print.R |only MSGARCH-1.2/MSGARCH/R/RcppExports.R | 4 MSGARCH-1.2/MSGARCH/R/Samplers.R | 13 + MSGARCH-1.2/MSGARCH/R/Transmat.R |only MSGARCH-1.2/MSGARCH/R/zzz.R | 2 MSGARCH-1.2/MSGARCH/inst/CITATION | 4 MSGARCH-1.2/MSGARCH/inst/COPYRIGHTS | 18 +- MSGARCH-1.2/MSGARCH/inst/test/run_test_functions.R | 2 MSGARCH-1.2/MSGARCH/inst/test/run_testthat.R | 44 +++--- MSGARCH-1.2/MSGARCH/inst/test/run_vignette.R | 19 +- MSGARCH-1.2/MSGARCH/man/FitMCMC.Rd | 11 - MSGARCH-1.2/MSGARCH/man/FitML.Rd | 2 MSGARCH-1.2/MSGARCH/man/MSGARCH-package.Rd | 2 MSGARCH-1.2/MSGARCH/man/PIT.Rd | 2 MSGARCH-1.2/MSGARCH/man/TransMat.Rd | 2 MSGARCH-1.2/MSGARCH/man/dem2gbp.Rd | 2 MSGARCH-1.2/MSGARCH/src/Decoding.cpp | 2 MSGARCH-1.2/MSGARCH/src/RcppExports.cpp | 16 ++ MSGARCH-1.2/MSGARCH/src/adaptMCMC.cpp |only 42 files changed, 147 insertions(+), 126 deletions(-)
Title: Friendly R Startup Configuration
Description: Adds support for R startup configuration via '.Renviron.d' and '.Rprofile.d' directories in addition to '.Renviron' and '.Rprofile' files. This makes it possible to keep private / secret environment variables separate from other environment variables. It also makes it easier to share specific startup settings by simply copying a file to a directory.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Diff between startup versions 0.7.0 dated 2017-09-07 and 0.8.0 dated 2017-10-19
DESCRIPTION | 6 +- MD5 | 55 ++++++++++--------- NAMESPACE | 1 NEWS | 31 ++++++++++ R/api.R | 2 R/backup.R | 23 ++++---- R/check.R | 35 +++++++++++- R/current_script.R |only R/debug.R | 31 ++++++++++ R/files_apply.R | 9 ++- R/is_rice.R |only R/renviron_d.R | 9 +-- R/rprofile_d.R | 26 ++++++--- R/startup.R | 126 +++++++++++++++++++++++++++++++++++++++----- R/startup_session_options.R | 12 ++-- R/sysinfo.R | 1 R/unload.R | 1 R/zzz.R | 26 ++++----- README.md | 8 +- build/vignette.rds |binary inst/doc/startup-intro.html | 7 +- inst/doc/startup-intro.md | 7 +- man/check.Rd | 3 - man/current_script.Rd |only man/is_rice.Rd |only man/startup.Rd | 10 ++- tests/api.R | 7 ++ tests/current_script.R |only tests/install.R | 23 ++++++++ tests/startup.R | 22 +++---- vignettes/startup-intro.md | 7 +- 31 files changed, 362 insertions(+), 126 deletions(-)
Title: Model and Analyse Interval Data
Description: Implements methodologies for modelling interval data by Normal
and Skew-Normal distributions, considering appropriate parameterizations of
the variance-covariance matrix that takes into account the intrinsic nature of
interval data, and lead to four different possible configuration structures.
The Skew-Normal parameters can be estimated by maximum likelihood, while Normal
parameters may be estimated by maximum likelihood or robust trimmed maximum
likelihood methods.
Author: Pedro Duarte Silva <psilva@porto.ucp.pt>, Paula Brito
<mpbrito.fep.up.pt>
Maintainer: Pedro Duarte Silva <psilva@porto.ucp.pt>
Diff between MAINT.Data versions 1.1.2 dated 2017-06-13 and 1.1.3 dated 2017-10-19
CHANGELOG | 6 +++++ DESCRIPTION | 8 +++---- MD5 | 39 +++++++++++++++++++++---------------- R/CPMaxLik.R | 13 +++++++++--- R/IdtMaxLikSN.R | 13 +++++++++--- R/RobMxtDEst.R | 6 +++++ R/Robldaqda.R | 2 - R/fasttle.R | 29 +++++++++++++++++++++------ R/lqda.R | 12 +++++++---- R/mle.R | 13 ++++++++---- R/sknda.R | 10 ++++++--- data/LoansbyPurpose_minmaxDt.RData |only data/LoansbyRiskLvs_minmaxDt.RData |only data/LoansbyRiskLvs_qntlDt.RData |only man/LoansbyPurpose_minmaxDt.Rd |only man/LoansbyRskLvs_minmaxDt.Rd |only man/LoansbyRskLvs_qntlDt.Rd |only man/MAINT.Data-internal.Rd | 1 man/MAINT.Data-package.Rd | 4 +-- man/getIdtOutl.Rd | 2 - man/lda-methods.Rd | 1 man/qda-methods.Rd | 1 man/snda-methods.Rd | 1 src/Makevars |only 24 files changed, 112 insertions(+), 49 deletions(-)
Title: Convert Html into Text
Description: Convert a html document to simple plain texts by removing all html tags. This package utilizes regular expressions to strip off html tags. It also offers gettxt() and browse() function, which enables you to get or browse texts at a certain web page.
Author: Sangchul Park [aut, cre]
Maintainer: Sangchul Park <mail@sangchul.com>
Diff between htm2txt versions 2.1.0 dated 2017-10-18 and 2.1.1 dated 2017-10-19
DESCRIPTION | 6 +++--- MD5 | 4 ++-- R/htm2txt.R | 30 +++++++----------------------- 3 files changed, 12 insertions(+), 28 deletions(-)
Title: Estimate the Gene Expression Levels and Component Proportions of
the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor
Samples
Description: Model cell type heterogeneity of bulk renal cell carcinoma. The observed gene expression in bulk tumor sample is modeled by a log-normal distribution with the location parameter structured as a linear combination of the component-specific gene expressions.
Author: Tao Wang
Maintainer: Tao Wang <tao.wang@utsouthwestern.edu>
Diff between DisHet versions 0.1.0 dated 2017-03-16 and 0.2.0 dated 2017-10-19
DESCRIPTION | 8 ++++---- MD5 | 10 ++++++---- NEWS | 2 +- data |only man/DisHet.Rd | 9 ++++++--- man/StromaExp.Rd | 9 ++++++--- man/eIST_signatures.Rd |only 7 files changed, 23 insertions(+), 15 deletions(-)
Title: Validate Brazilian Administrative Registers
Description: Contains functions to validate administrative register as
CPF (Cadastro de Pessoa Fisica), CNPJ (Cadastro de Pessoa Juridica), PIS (Programa de Integracao Social),
CNES (Cadastro Nacional de Saude).
It can check individual registers or create a 'rmarkdown' analysis of a base.
Author: Gustavo Coelho [aut, cre],
Lucas Mation [aut]
Maintainer: Gustavo Coelho <gustavo.coelho@ipea.gov.br>
Diff between validaRA versions 0.1.0 dated 2017-10-12 and 0.1.1 dated 2017-10-19
DESCRIPTION | 6 MD5 | 75 +-- NAMESPACE | 30 - NEWS.md |only R/RcppExports.R | 30 - R/converter_ra.R | 34 - R/estatistica.R | 50 +- R/gera_digitos.R | 42 +- R/tratadocumento.R | 46 +- R/valida_documento.R | 246 ++++++------ R/valida_titulo_eleitor.R | 58 +-- README.md | 96 ++-- build/vignette.rds |binary inst/doc/validaRA.R | 165 ++++---- inst/doc/validaRA.Rmd | 341 ++++++++--------- inst/doc/validaRA.html | 713 ++++++++++++++++++------------------- man/doc2integer64.Rd | 40 +- man/gera_digito.Rd | 46 +- man/relatorioDOC.Rd | 68 +-- man/tabulacaoDOC.Rd | 52 +- man/trata_cpf.Rd | 46 +- man/valida_doc.Rd | 54 +- man/valida_doc_df.Rd | 46 +- src/convert2int.cpp | 14 src/libraries.h | 2 src/ra/CNS.hpp | 205 +++++----- src/ra/Cnpj.hpp | 151 +++---- src/ra/Cpf.hpp | 150 +++---- src/ra/Pis.hpp | 108 ++--- src/ra/Ra.hpp | 276 +++++++------- src/valida_ra.cpp | 10 tests/testthat.R | 8 tests/testthat/testcnpj.R | 78 ++-- tests/testthat/testcns.R | 106 ++--- tests/testthat/testcpf.R | 120 +++--- tests/testthat/testpis.R | 90 ++-- tests/testthat/testtituloeleitor.R | 44 +- tests/testthat/testtratacpf.R | 18 vignettes/validaRA.Rmd | 341 ++++++++--------- 39 files changed, 1974 insertions(+), 2031 deletions(-)
Title: Test Analysis Modules
Description: Includes marginal maximum likelihood estimation and joint maximum
likelihood estimation for unidimensional and multidimensional
item response models. The package functionality covers the
Rasch model, 2PL model, 3PL model, generalized partial credit model,
multi-faceted Rasch model, nominal item response model,
structured latent class model, mixture distribution IRT models,
and located latent class models. Latent regression models and
plausible value imputation are also supported. For details see
Adams, Wilson, and Wang, 1997, <doi:10.1177/0146621697211001>,
Adams, Wilson, and Wu, 1997, <doi:10.3102/10769986022001047>,
Formann, 1982, <doi:10.1002/bimj.4710240209>,
Formann, 1992, <doi:10.1080/01621459.1992.10475229>.
Author: Alexander Robitzsch [aut, cre], Thomas Kiefer [aut], Margaret Wu [aut]
Maintainer: Alexander Robitzsch <robitzsch@ipn.uni-kiel.de>
Diff between TAM versions 2.6-2 dated 2017-08-13 and 2.7-56 dated 2017-10-19
TAM-2.6-2/TAM/R/TAM-internal_helper.R |only TAM-2.6-2/TAM/R/summary.tamaan.3pl.intro.R |only TAM-2.6-2/TAM/R/summary.tamaan.aux.R |only TAM-2.6-2/TAM/R/tam.modelfit.func.R |only TAM-2.7-56/TAM/DESCRIPTION | 29 TAM-2.7-56/TAM/MD5 | 820 +++++----- TAM-2.7-56/TAM/NAMESPACE | 12 TAM-2.7-56/TAM/R/DescribeBy.R | 3 TAM-2.7-56/TAM/R/EAPrel.R | 13 TAM-2.7-56/TAM/R/IRT.WrightMap.R | 3 TAM-2.7-56/TAM/R/IRT.data.tam.R | 3 TAM-2.7-56/TAM/R/IRT.drawPV.R | 3 TAM-2.7-56/TAM/R/IRT.expectedCounts.tam.R | 3 TAM-2.7-56/TAM/R/IRT.factor.scores.tam.R | 3 TAM-2.7-56/TAM/R/IRT.frequencies.tam.R | 3 TAM-2.7-56/TAM/R/IRT.informationCurve.R | 3 TAM-2.7-56/TAM/R/IRT.irfprob.tam.R | 3 TAM-2.7-56/TAM/R/IRT.itemfit.R | 3 TAM-2.7-56/TAM/R/IRT.likelihood.TAM.R | 3 TAM-2.7-56/TAM/R/IRT.linearCFA.R | 3 TAM-2.7-56/TAM/R/IRT.modelfit.tam.R | 3 TAM-2.7-56/TAM/R/IRT.residuals.R | 3 TAM-2.7-56/TAM/R/IRT.simulate.R | 3 TAM-2.7-56/TAM/R/IRT.threshold.R | 3 TAM-2.7-56/TAM/R/IRT.truescore.R | 3 TAM-2.7-56/TAM/R/IRTLikelihood.cfa.R | 36 TAM-2.7-56/TAM/R/IRTLikelihood.ctt.R | 3 TAM-2.7-56/TAM/R/RcppExports.R | 7 TAM-2.7-56/TAM/R/Scale.R | 3 TAM-2.7-56/TAM/R/TAM_lavaanify.R | 3 TAM-2.7-56/TAM/R/WLErel.R | 13 TAM-2.7-56/TAM/R/WLErel_exclude_missings.R | 5 TAM-2.7-56/TAM/R/add.colnames.resp.R | 3 TAM-2.7-56/TAM/R/add.lead.R |only TAM-2.7-56/TAM/R/anova.tam.R | 3 TAM-2.7-56/TAM/R/cfa.extract.itempars.R | 15 TAM-2.7-56/TAM/R/change.grep.lavpartable.R | 3 TAM-2.7-56/TAM/R/designMatrices.R | 3 TAM-2.7-56/TAM/R/designMatrices.mfr.R | 3 TAM-2.7-56/TAM/R/designMatrices.mfr2.R | 3 TAM-2.7-56/TAM/R/designMatrices.mfr_aux.R | 3 TAM-2.7-56/TAM/R/designMatrices.mfr_aux2.R | 3 TAM-2.7-56/TAM/R/designMatrices_aux.R | 3 TAM-2.7-56/TAM/R/designMatrices_aux2.R | 3 TAM-2.7-56/TAM/R/doparse.R | 3 TAM-2.7-56/TAM/R/extend.label.group.R | 3 TAM-2.7-56/TAM/R/lavaanify.IRT.R | 3 TAM-2.7-56/TAM/R/lavaanify.grep.MEASERR.R | 3 TAM-2.7-56/TAM/R/lavaanify.grep.nonlinear.R | 3 TAM-2.7-56/TAM/R/lavpartable.grep.underbrace.R | 3 TAM-2.7-56/TAM/R/lavpartable2lavsyntax.R | 3 TAM-2.7-56/TAM/R/logLik.tam.jml.R | 5 TAM-2.7-56/TAM/R/logLik_tam.R | 3 TAM-2.7-56/TAM/R/msq.itemfit.R | 3 TAM-2.7-56/TAM/R/msq.itemfitWLE.R | 55 TAM-2.7-56/TAM/R/plot.IRT.informationCurves.R | 3 TAM-2.7-56/TAM/R/plot.ctt.R | 3 TAM-2.7-56/TAM/R/plot.tam.R | 3 TAM-2.7-56/TAM/R/plot.tam.pv.mcmc.R | 5 TAM-2.7-56/TAM/R/plotDevianceTAM.R | 3 TAM-2.7-56/TAM/R/predict.tam.R | 3 TAM-2.7-56/TAM/R/print.tam.R | 3 TAM-2.7-56/TAM/R/print.tam.linking.R | 5 TAM-2.7-56/TAM/R/print.tam.wle.R | 3 TAM-2.7-56/TAM/R/print.tam_linking_2studies.R | 5 TAM-2.7-56/TAM/R/prior_list_include.R | 5 TAM-2.7-56/TAM/R/remove.duplicated.variances.lavsyn.R | 3 TAM-2.7-56/TAM/R/require_namespace_msg.R | 5 TAM-2.7-56/TAM/R/split.syn.string.R | 3 TAM-2.7-56/TAM/R/summary.msq.itemfit.R | 30 TAM-2.7-56/TAM/R/summary.msq.itemfitWLE.R | 40 TAM-2.7-56/TAM/R/summary.tam.Q3.R | 3 TAM-2.7-56/TAM/R/summary.tam.R | 185 +- TAM-2.7-56/TAM/R/summary.tam.fit.R | 3 TAM-2.7-56/TAM/R/summary.tam.jml.R | 3 TAM-2.7-56/TAM/R/summary.tam.linking.R | 13 TAM-2.7-56/TAM/R/summary.tam.mml.3pl.R | 47 TAM-2.7-56/TAM/R/summary.tam.modelfit.R | 3 TAM-2.7-56/TAM/R/summary.tam.pv.mcmc.R | 56 TAM-2.7-56/TAM/R/summary.tam.wle.R | 16 TAM-2.7-56/TAM/R/summary.tam_linking_2studies.R | 25 TAM-2.7-56/TAM/R/summary.tamaan.R | 93 - TAM-2.7-56/TAM/R/summary_tamaan_3pl_discrete_distribution.R |only TAM-2.7-56/TAM/R/summary_tamaan_3pl_distr_mixture.R |only TAM-2.7-56/TAM/R/summary_tamaan_3pl_intro.R |only TAM-2.7-56/TAM/R/summary_tamaan_3pl_lcaprobs.R |only TAM-2.7-56/TAM/R/summary_tamaan_3pl_loclca.R |only TAM-2.7-56/TAM/R/summary_tamaan_item_parameters.R |only TAM-2.7-56/TAM/R/summary_tamaan_item_parameters_mixture.R |only TAM-2.7-56/TAM/R/summary_tamaan_normal_skillspace.R |only TAM-2.7-56/TAM/R/tam.Q3.R | 3 TAM-2.7-56/TAM/R/tam.R | 3 TAM-2.7-56/TAM/R/tam.ctt.R | 3 TAM-2.7-56/TAM/R/tam.ctt2.R | 3 TAM-2.7-56/TAM/R/tam.ctt3.R | 3 TAM-2.7-56/TAM/R/tam.fa.R | 3 TAM-2.7-56/TAM/R/tam.fit.R | 11 TAM-2.7-56/TAM/R/tam.jml.R | 5 TAM-2.7-56/TAM/R/tam.jml.fit.R | 3 TAM-2.7-56/TAM/R/tam.jml2.R | 3 TAM-2.7-56/TAM/R/tam.latreg.R | 25 TAM-2.7-56/TAM/R/tam.linking.R | 5 TAM-2.7-56/TAM/R/tam.mml.2pl.R | 3 TAM-2.7-56/TAM/R/tam.mml.3pl.R | 20 TAM-2.7-56/TAM/R/tam.mml.R | 3 TAM-2.7-56/TAM/R/tam.mml.mfr.R | 3 TAM-2.7-56/TAM/R/tam.mml.wle.R | 3 TAM-2.7-56/TAM/R/tam.mml.wle2.R | 35 TAM-2.7-56/TAM/R/tam.modelfit.IRT.R |only TAM-2.7-56/TAM/R/tam.modelfit.R | 3 TAM-2.7-56/TAM/R/tam.modelfit.args.R |only TAM-2.7-56/TAM/R/tam.parameterfix.defaults.R | 3 TAM-2.7-56/TAM/R/tam.pv.R | 42 TAM-2.7-56/TAM/R/tam.pv.mcmc.R | 61 TAM-2.7-56/TAM/R/tam.q3.aux.R | 3 TAM-2.7-56/TAM/R/tam.se.R | 3 TAM-2.7-56/TAM/R/tam.wle.R | 3 TAM-2.7-56/TAM/R/tam_01_pattern.R | 5 TAM-2.7-56/TAM/R/tam_AXsi_compute.R | 5 TAM-2.7-56/TAM/R/tam_AXsi_fit.R | 5 TAM-2.7-56/TAM/R/tam_NA_pattern.R | 3 TAM-2.7-56/TAM/R/tam_Rhat_3splits.R | 5 TAM-2.7-56/TAM/R/tam_accelerate_parameters.R | 3 TAM-2.7-56/TAM/R/tam_acceleration_inits.R | 5 TAM-2.7-56/TAM/R/tam_acceleration_inits_create_list.R | 5 TAM-2.7-56/TAM/R/tam_acf_matrix.R | 15 TAM-2.7-56/TAM/R/tam_aggregate.R | 5 TAM-2.7-56/TAM/R/tam_anticomb2.R |only TAM-2.7-56/TAM/R/tam_args_CALL_search.R | 5 TAM-2.7-56/TAM/R/tam_args_replace_value.R | 5 TAM-2.7-56/TAM/R/tam_assign_list_elements.R | 5 TAM-2.7-56/TAM/R/tam_bayesian_bootstrap.R |only TAM-2.7-56/TAM/R/tam_calc_counts.R | 3 TAM-2.7-56/TAM/R/tam_calc_exp.R | 3 TAM-2.7-56/TAM/R/tam_calc_posterior.R | 5 TAM-2.7-56/TAM/R/tam_calc_prob_helper_subtract_max.R | 3 TAM-2.7-56/TAM/R/tam_cor_wt.R |only TAM-2.7-56/TAM/R/tam_cov_wt.R |only TAM-2.7-56/TAM/R/tam_csink.R |only TAM-2.7-56/TAM/R/tam_deviance_history_init.R | 5 TAM-2.7-56/TAM/R/tam_difference_quotient.R | 3 TAM-2.7-56/TAM/R/tam_dmvnorm.R | 5 TAM-2.7-56/TAM/R/tam_dtnorm.R | 5 TAM-2.7-56/TAM/R/tam_evaluate_prior.R | 5 TAM-2.7-56/TAM/R/tam_fa_reliability_nonlinearSEM.R | 3 TAM-2.7-56/TAM/R/tam_ginv.R | 9 TAM-2.7-56/TAM/R/tam_in_names_list.R | 7 TAM-2.7-56/TAM/R/tam_interval_index.R | 5 TAM-2.7-56/TAM/R/tam_irf_3pl.R | 8 TAM-2.7-56/TAM/R/tam_itempartable.R | 3 TAM-2.7-56/TAM/R/tam_jml_version1.R | 5 TAM-2.7-56/TAM/R/tam_jml_version1_calc_xsi.R | 5 TAM-2.7-56/TAM/R/tam_jml_version2.R | 5 TAM-2.7-56/TAM/R/tam_jml_version2_calc_xsi.R | 5 TAM-2.7-56/TAM/R/tam_jml_wle.R | 3 TAM-2.7-56/TAM/R/tam_latreg_ic.R | 5 TAM-2.7-56/TAM/R/tam_linking_2studies.R | 3 TAM-2.7-56/TAM/R/tam_linking_2studies_create_M_SD.R | 5 TAM-2.7-56/TAM/R/tam_linking_2studies_create_M_SD_rownames.R | 5 TAM-2.7-56/TAM/R/tam_linking_extract_list.R | 5 TAM-2.7-56/TAM/R/tam_linking_extract_parameters.R | 5 TAM-2.7-56/TAM/R/tam_linking_extract_parameters_trait_distribution.R | 5 TAM-2.7-56/TAM/R/tam_linking_include_list.R | 5 TAM-2.7-56/TAM/R/tam_linking_output_summary.R | 5 TAM-2.7-56/TAM/R/tam_linking_parameters_select_common_items.R | 5 TAM-2.7-56/TAM/R/tam_linking_transform_item_parameters.R | 5 TAM-2.7-56/TAM/R/tam_matrix2.R | 5 TAM-2.7-56/TAM/R/tam_mml_2pl_mstep_slope.R | 5 TAM-2.7-56/TAM/R/tam_mml_2pl_sufficient_statistics_item_slope.R | 5 TAM-2.7-56/TAM/R/tam_mml_3pl_calc_exp.R | 3 TAM-2.7-56/TAM/R/tam_mml_3pl_calc_ll.R | 3 TAM-2.7-56/TAM/R/tam_mml_3pl_calc_ll_est_guessing.R | 3 TAM-2.7-56/TAM/R/tam_mml_3pl_calc_prob.R | 26 TAM-2.7-56/TAM/R/tam_mml_3pl_calc_total_ll.R | 3 TAM-2.7-56/TAM/R/tam_mml_3pl_computeB.R | 3 TAM-2.7-56/TAM/R/tam_mml_3pl_compute_Fdes.R | 5 TAM-2.7-56/TAM/R/tam_mml_3pl_create_E.R | 3 TAM-2.7-56/TAM/R/tam_mml_3pl_create_notA.R | 5 TAM-2.7-56/TAM/R/tam_mml_3pl_deviance.R | 5 TAM-2.7-56/TAM/R/tam_mml_3pl_distributionmoments.R | 5 TAM-2.7-56/TAM/R/tam_mml_3pl_expected_counts.R | 3 TAM-2.7-56/TAM/R/tam_mml_3pl_ic.R | 3 TAM-2.7-56/TAM/R/tam_mml_3pl_inits_group.R | 5 TAM-2.7-56/TAM/R/tam_mml_3pl_itempartable.R | 3 TAM-2.7-56/TAM/R/tam_mml_3pl_mstep_item_guessing.R | 5 TAM-2.7-56/TAM/R/tam_mml_3pl_mstep_item_intercepts.R | 3 TAM-2.7-56/TAM/R/tam_mml_3pl_mstep_item_slopes.R | 3 TAM-2.7-56/TAM/R/tam_mml_3pl_mstep_item_slopes_gammaslope_center.R | 3 TAM-2.7-56/TAM/R/tam_mml_3pl_mstep_regression.R | 3 TAM-2.7-56/TAM/R/tam_mml_3pl_skillspace.R | 3 TAM-2.7-56/TAM/R/tam_mml_3pl_stud_prior_discrete.R | 5 TAM-2.7-56/TAM/R/tam_mml_3pl_variance_fixed.R | 5 TAM-2.7-56/TAM/R/tam_mml_3pl_vec_add_increment.R | 3 TAM-2.7-56/TAM/R/tam_mml_calc_prob.R | 5 TAM-2.7-56/TAM/R/tam_mml_compute_AXsi.R | 3 TAM-2.7-56/TAM/R/tam_mml_compute_deviance.R | 5 TAM-2.7-56/TAM/R/tam_mml_control_list_define.R | 5 TAM-2.7-56/TAM/R/tam_mml_create_nodes.R | 19 TAM-2.7-56/TAM/R/tam_mml_create_nodes_multidim_nodes.R |only TAM-2.7-56/TAM/R/tam_mml_ic.R | 5 TAM-2.7-56/TAM/R/tam_mml_ic_criteria.R | 5 TAM-2.7-56/TAM/R/tam_mml_inits_beta.R | 5 TAM-2.7-56/TAM/R/tam_mml_inits_groups.R | 5 TAM-2.7-56/TAM/R/tam_mml_inits_variance.R | 5 TAM-2.7-56/TAM/R/tam_mml_inits_xsi.R | 7 TAM-2.7-56/TAM/R/tam_mml_mfr_collect_xsi_parameters.R | 5 TAM-2.7-56/TAM/R/tam_mml_mfr_dataprep.R | 3 TAM-2.7-56/TAM/R/tam_mml_mfr_inits_beta.R | 3 TAM-2.7-56/TAM/R/tam_mml_mfr_inits_xsi.R | 5 TAM-2.7-56/TAM/R/tam_mml_mfr_proc_compute_maxKi.R | 5 TAM-2.7-56/TAM/R/tam_mml_mfr_proc_create_design_matrices.R | 3 TAM-2.7-56/TAM/R/tam_mml_mfr_proc_delete_missing_items.R | 5 TAM-2.7-56/TAM/R/tam_mml_mfr_proc_multiple_person_ids.R | 5 TAM-2.7-56/TAM/R/tam_mml_mfr_proc_response_indicators.R | 5 TAM-2.7-56/TAM/R/tam_mml_mfr_proc_xsi_setnull.R | 5 TAM-2.7-56/TAM/R/tam_mml_mstep_intercept.R | 3 TAM-2.7-56/TAM/R/tam_mml_mstep_intercept_optim.R | 5 TAM-2.7-56/TAM/R/tam_mml_mstep_intercept_quasi_newton_R.R | 5 TAM-2.7-56/TAM/R/tam_mml_mstep_regression.R | 3 TAM-2.7-56/TAM/R/tam_mml_mstep_xsi.R | 3 TAM-2.7-56/TAM/R/tam_mml_person_EAP.R | 5 TAM-2.7-56/TAM/R/tam_mml_person_EAP_rel.R | 5 TAM-2.7-56/TAM/R/tam_mml_person_SD_EAP.R | 5 TAM-2.7-56/TAM/R/tam_mml_person_maxscore.R | 5 TAM-2.7-56/TAM/R/tam_mml_person_posterior.R | 5 TAM-2.7-56/TAM/R/tam_mml_proc_est_xsi_index.R | 5 TAM-2.7-56/TAM/R/tam_mml_proc_prior_list_xsi.R | 5 TAM-2.7-56/TAM/R/tam_mml_proc_response_indicators.R | 5 TAM-2.7-56/TAM/R/tam_mml_proc_unidim_simplify.R | 5 TAM-2.7-56/TAM/R/tam_mml_proc_xsi_parameter_index_A.R | 5 TAM-2.7-56/TAM/R/tam_mml_progress_em.R | 5 TAM-2.7-56/TAM/R/tam_mml_progress_em0.R | 5 TAM-2.7-56/TAM/R/tam_mml_progress_proc_nodes.R | 5 TAM-2.7-56/TAM/R/tam_mml_se_AXsi.R | 5 TAM-2.7-56/TAM/R/tam_mml_sufficient_statistics.R | 5 TAM-2.7-56/TAM/R/tam_mml_update_stochastic_nodes.R | 5 TAM-2.7-56/TAM/R/tam_mml_warning_message_multiple_group_models.R | 5 TAM-2.7-56/TAM/R/tam_mml_wle_check_identifiability.R | 5 TAM-2.7-56/TAM/R/tam_mml_wle_postproc.R | 43 TAM-2.7-56/TAM/R/tam_mml_wle_proc_input_data.R | 5 TAM-2.7-56/TAM/R/tam_mml_wle_theta_inits.R | 7 TAM-2.7-56/TAM/R/tam_mml_wle_update_theta.R | 5 TAM-2.7-56/TAM/R/tam_normalize_matrix_rows.R | 5 TAM-2.7-56/TAM/R/tam_normalize_vector.R | 5 TAM-2.7-56/TAM/R/tam_osink.R |only TAM-2.7-56/TAM/R/tam_outer.R | 5 TAM-2.7-56/TAM/R/tam_packageinfo.R | 5 TAM-2.7-56/TAM/R/tam_parameter_change.R | 5 TAM-2.7-56/TAM/R/tam_print_call.R | 3 TAM-2.7-56/TAM/R/tam_print_computation_time.R |only TAM-2.7-56/TAM/R/tam_print_package_rsession.R |only TAM-2.7-56/TAM/R/tam_prior_eval_log_density_one_parameter.R | 5 TAM-2.7-56/TAM/R/tam_pv_draw_pv_nonparametric.R | 5 TAM-2.7-56/TAM/R/tam_pv_draw_pv_normal_approximation_1dim.R | 5 TAM-2.7-56/TAM/R/tam_pv_draw_pv_normal_approximation_multidim.R | 5 TAM-2.7-56/TAM/R/tam_pv_mcmc_calc_probs.R |only TAM-2.7-56/TAM/R/tam_pv_mcmc_calc_probs_irf_3pl.R |only TAM-2.7-56/TAM/R/tam_pv_mcmc_compute_marginal_likelihood.R | 5 TAM-2.7-56/TAM/R/tam_pv_mcmc_evaluate_likelihood.R | 5 TAM-2.7-56/TAM/R/tam_pv_mcmc_inits_MH_sampling_objects.R | 9 TAM-2.7-56/TAM/R/tam_pv_mcmc_inits_plausible_values_objects.R | 5 TAM-2.7-56/TAM/R/tam_pv_mcmc_inits_sampled_parameters_objects.R | 9 TAM-2.7-56/TAM/R/tam_pv_mcmc_inits_theta.R | 10 TAM-2.7-56/TAM/R/tam_pv_mcmc_likelihood.R | 5 TAM-2.7-56/TAM/R/tam_pv_mcmc_likelihood_R.R | 5 TAM-2.7-56/TAM/R/tam_pv_mcmc_parameter_samples.R | 23 TAM-2.7-56/TAM/R/tam_pv_mcmc_parameter_samples_correlation.R |only TAM-2.7-56/TAM/R/tam_pv_mcmc_parameter_samples_correlation_index.R |only TAM-2.7-56/TAM/R/tam_pv_mcmc_parameter_summary.R | 5 TAM-2.7-56/TAM/R/tam_pv_mcmc_person_inits_from_resp.R | 5 TAM-2.7-56/TAM/R/tam_pv_mcmc_postproc_ic.R | 3 TAM-2.7-56/TAM/R/tam_pv_mcmc_postproc_theta_acceptance_MH.R | 5 TAM-2.7-56/TAM/R/tam_pv_mcmc_postproc_theta_posterior.R | 5 TAM-2.7-56/TAM/R/tam_pv_mcmc_prior_density.R | 5 TAM-2.7-56/TAM/R/tam_pv_mcmc_proc_input.R | 9 TAM-2.7-56/TAM/R/tam_pv_mcmc_proc_regressors.R | 5 TAM-2.7-56/TAM/R/tam_pv_mcmc_proposal_theta.R | 9 TAM-2.7-56/TAM/R/tam_pv_mcmc_pv_acf.R | 3 TAM-2.7-56/TAM/R/tam_pv_mcmc_refresh_theta.R | 3 TAM-2.7-56/TAM/R/tam_pv_mcmc_sample_beta_variance.R | 63 TAM-2.7-56/TAM/R/tam_pv_mcmc_sample_beta_variance_lm_beta.R |only TAM-2.7-56/TAM/R/tam_pv_mcmc_save_parameters.R | 5 TAM-2.7-56/TAM/R/tam_pv_mcmc_theta_MH_ratio_accept.R | 14 TAM-2.7-56/TAM/R/tam_pv_mcmc_update_plausible_values.R | 3 TAM-2.7-56/TAM/R/tam_pv_recommend_tam_pv_mcmc.R | 5 TAM-2.7-56/TAM/R/tam_pv_sampling_beta.R | 5 TAM-2.7-56/TAM/R/tam_pv_sampling_theta.R | 5 TAM-2.7-56/TAM/R/tam_pv_summary_covariance.R |only TAM-2.7-56/TAM/R/tam_rbind_twomatrices.R | 5 TAM-2.7-56/TAM/R/tam_remove_missings.R | 5 TAM-2.7-56/TAM/R/tam_round_data_frame.R |only TAM-2.7-56/TAM/R/tam_round_data_frame_print.R |only TAM-2.7-56/TAM/R/tam_rowCumsums.R | 5 TAM-2.7-56/TAM/R/tam_rowMaxs.R |only TAM-2.7-56/TAM/R/tam_rowcumsums1.R |only TAM-2.7-56/TAM/R/tam_rsessinfo.R | 3 TAM-2.7-56/TAM/R/tam_solve_ridge.R | 5 TAM-2.7-56/TAM/R/tam_stud_prior.R | 3 TAM-2.7-56/TAM/R/tam_stud_prior_multiple_groups.R | 5 TAM-2.7-56/TAM/R/tam_summary_print_ic.R |only TAM-2.7-56/TAM/R/tam_summary_print_ic_description.R |only TAM-2.7-56/TAM/R/tam_summary_print_ic_one_ic.R |only TAM-2.7-56/TAM/R/tam_theta_sq.R | 5 TAM-2.7-56/TAM/R/tam_theta_sq1.R |only TAM-2.7-56/TAM/R/tam_thurstonian_threshold.R | 3 TAM-2.7-56/TAM/R/tam_trim_increment.R | 5 TAM-2.7-56/TAM/R/tam_vec2symmmatrix.R | 16 TAM-2.7-56/TAM/R/tam_weighted_stats_select.R |only TAM-2.7-56/TAM/R/tam_wle_print_WLErel.R | 3 TAM-2.7-56/TAM/R/tam_wle_print_general.R | 3 TAM-2.7-56/TAM/R/tamaan.3pl.lca.R | 3 TAM-2.7-56/TAM/R/tamaan.3pl.loclca.R | 3 TAM-2.7-56/TAM/R/tamaan.3pl.mixture.R | 3 TAM-2.7-56/TAM/R/tamaan.3pl.olca.R | 3 TAM-2.7-56/TAM/R/tamaan.3pl.trait.R | 3 TAM-2.7-56/TAM/R/tamaan.R | 41 TAM-2.7-56/TAM/R/tamaanify.R | 3 TAM-2.7-56/TAM/R/tamaanify.create.A.R | 3 TAM-2.7-56/TAM/R/tamaanify.create.Q.R | 3 TAM-2.7-56/TAM/R/tamaanify.define.method.R | 3 TAM-2.7-56/TAM/R/tamaanify.grep.linequations.R | 3 TAM-2.7-56/TAM/R/tamaanify.modelconstraint.loadings.R | 3 TAM-2.7-56/TAM/R/tamaanify.modelprior.R | 3 TAM-2.7-56/TAM/R/tamaanify.proc.analysis.R | 3 TAM-2.7-56/TAM/R/tamaanify.proc.items.R | 3 TAM-2.7-56/TAM/R/tamaanify.proc.itemtype.R | 3 TAM-2.7-56/TAM/R/tamaanify.proc.lavaanmodel.R | 3 TAM-2.7-56/TAM/R/tamaanify.proc.loadings.B.fixed.R | 3 TAM-2.7-56/TAM/R/tamaanify.proc.modelconstraint.R | 3 TAM-2.7-56/TAM/R/tamaanify.tam.mml.3pl.deltadesign.R | 3 TAM-2.7-56/TAM/R/tamaanify.tam.mml.3pl.designMatrices.LCA.R | 3 TAM-2.7-56/TAM/R/tamaanify.tam.mml.3pl.designMatrices.LOCLCA.R | 3 TAM-2.7-56/TAM/R/tamaanify.tam.mml.3pl.designMatrices.MIXTURE.R | 3 TAM-2.7-56/TAM/R/tamaanify.tam.mml.3pl.designMatrices.OLCA.R | 3 TAM-2.7-56/TAM/R/tamaanify.tam.mml.3pl.designMatrices.TRAIT.R | 3 TAM-2.7-56/TAM/R/tamaanify.tam.mml.3pldesignMatrices.R | 3 TAM-2.7-56/TAM/R/tamaanify.variance.fixed.R | 3 TAM-2.7-56/TAM/R/tamaanify_tam_mml_3pl_create_delta_design.R | 5 TAM-2.7-56/TAM/R/tamcat.R | 12 TAM-2.7-56/TAM/R/tampv2datalist.R | 10 TAM-2.7-56/TAM/R/weighted_curtosis.R | 9 TAM-2.7-56/TAM/R/weighted_mean.R | 11 TAM-2.7-56/TAM/R/weighted_quantile.R | 88 - TAM-2.7-56/TAM/R/weighted_quantile_type_selection.R |only TAM-2.7-56/TAM/R/weighted_sd.R |only TAM-2.7-56/TAM/R/weighted_skewness.R | 9 TAM-2.7-56/TAM/R/weighted_table.R | 3 TAM-2.7-56/TAM/R/weighted_var.R | 26 TAM-2.7-56/TAM/R/zzz.R | 3 TAM-2.7-56/TAM/inst/CITATION | 40 TAM-2.7-56/TAM/inst/NEWS | 52 TAM-2.7-56/TAM/man/DescribeBy.Rd | 4 TAM-2.7-56/TAM/man/IRT.WrightMap.Rd | 4 TAM-2.7-56/TAM/man/IRT.data.tam.Rd | 4 TAM-2.7-56/TAM/man/IRT.drawPV.Rd | 4 TAM-2.7-56/TAM/man/IRT.expectedCounts.tam.Rd | 4 TAM-2.7-56/TAM/man/IRT.factor.scores.tam.Rd | 4 TAM-2.7-56/TAM/man/IRT.frequencies.tam.Rd | 4 TAM-2.7-56/TAM/man/IRT.informationCurves.Rd | 4 TAM-2.7-56/TAM/man/IRT.irfprob.tam.Rd | 4 TAM-2.7-56/TAM/man/IRT.itemfit.Rd | 4 TAM-2.7-56/TAM/man/IRT.likelihood.tam.Rd | 4 TAM-2.7-56/TAM/man/IRT.linearCFA.Rd | 4 TAM-2.7-56/TAM/man/IRT.residuals.Rd | 4 TAM-2.7-56/TAM/man/IRT.simulate.Rd | 4 TAM-2.7-56/TAM/man/IRT.threshold.Rd | 4 TAM-2.7-56/TAM/man/IRT.truescore.Rd | 4 TAM-2.7-56/TAM/man/IRTLikelihood.cfa.Rd | 4 TAM-2.7-56/TAM/man/IRTLikelihood.ctt.Rd | 4 TAM-2.7-56/TAM/man/Scale.Rd | 4 TAM-2.7-56/TAM/man/TAM-defunct.Rd | 4 TAM-2.7-56/TAM/man/TAM-package.Rd | 31 TAM-2.7-56/TAM/man/TAM-utilities.Rd | 48 TAM-2.7-56/TAM/man/WLErel.Rd | 9 TAM-2.7-56/TAM/man/anova.tam.Rd | 4 TAM-2.7-56/TAM/man/cfa.extract.itempars.Rd | 4 TAM-2.7-56/TAM/man/data.cqc.Rd | 4 TAM-2.7-56/TAM/man/data.ctest.Rd | 4 TAM-2.7-56/TAM/man/data.examples.Rd | 4 TAM-2.7-56/TAM/man/data.fims.Aus.Jpn.Rd | 4 TAM-2.7-56/TAM/man/data.geiser.Rd | 4 TAM-2.7-56/TAM/man/data.gpcm.Rd | 4 TAM-2.7-56/TAM/man/data.janssen.Rd | 4 TAM-2.7-56/TAM/man/data.mc.Rd | 4 TAM-2.7-56/TAM/man/data.numeracy.Rd | 4 TAM-2.7-56/TAM/man/data.sim.mfr.Rd | 4 TAM-2.7-56/TAM/man/data.sim.rasch.Rd | 4 TAM-2.7-56/TAM/man/data.timssAusTwn.Rd | 4 TAM-2.7-56/TAM/man/designMatrices.Rd | 4 TAM-2.7-56/TAM/man/doparse.Rd | 4 TAM-2.7-56/TAM/man/lavaanify.IRT.Rd | 4 TAM-2.7-56/TAM/man/msq.itemfit.Rd | 9 TAM-2.7-56/TAM/man/plot.tam.Rd | 4 TAM-2.7-56/TAM/man/plotDevianceTAM.Rd | 4 TAM-2.7-56/TAM/man/predict.Rd | 4 TAM-2.7-56/TAM/man/tam.ctt.Rd | 4 TAM-2.7-56/TAM/man/tam.fa.Rd | 4 TAM-2.7-56/TAM/man/tam.fit.Rd | 4 TAM-2.7-56/TAM/man/tam.jml.Rd | 4 TAM-2.7-56/TAM/man/tam.latreg.Rd | 4 TAM-2.7-56/TAM/man/tam.linking.Rd | 4 TAM-2.7-56/TAM/man/tam.mml.3pl.Rd | 4 TAM-2.7-56/TAM/man/tam.mml.Rd | 4 TAM-2.7-56/TAM/man/tam.modelfit.Rd | 4 TAM-2.7-56/TAM/man/tam.pv.Rd | 39 TAM-2.7-56/TAM/man/tam.se.Rd | 4 TAM-2.7-56/TAM/man/tam.threshold.Rd | 4 TAM-2.7-56/TAM/man/tam.wle.Rd | 7 TAM-2.7-56/TAM/man/tam_NA_pattern.Rd | 4 TAM-2.7-56/TAM/man/tam_irf_3pl.Rd | 8 TAM-2.7-56/TAM/man/tamaan.Rd | 4 TAM-2.7-56/TAM/man/tamaanify.Rd | 4 TAM-2.7-56/TAM/man/tampv2datalist.Rd | 13 TAM-2.7-56/TAM/man/weighted_Stats.Rd | 17 TAM-2.7-56/TAM/src/RcppExports.cpp | 20 TAM-2.7-56/TAM/src/init.c | 77 TAM-2.7-56/TAM/src/irt_likelihood_cfa2.cpp | 3 TAM-2.7-56/TAM/src/msq_itemfit.cpp | 3 TAM-2.7-56/TAM/src/prior_normal_density_c.cpp | 11 TAM-2.7-56/TAM/src/rowcumsums_source.cpp | 3 TAM-2.7-56/TAM/src/tam_calcexp.cpp | 3 TAM-2.7-56/TAM/src/tam_caux.c | 3 TAM-2.7-56/TAM/src/tam_ctt_c.cpp | 3 TAM-2.7-56/TAM/src/tam_fit_simul.cpp | 3 TAM-2.7-56/TAM/src/tam_helper_ccode.cpp | 3 TAM-2.7-56/TAM/src/tam_mml_3pl_helper_functions.cpp | 3 TAM-2.7-56/TAM/src/tam_mml_mfr_helper.cpp | 3 TAM-2.7-56/TAM/src/tam_modelfit_aux.cpp | 3 TAM-2.7-56/TAM/src/tam_pv_mcmc.cpp | 3 TAM-2.7-56/TAM/src/tam_pv_mcmc_calc_probs_irf_3pl_rcpp.cpp |only TAM-2.7-56/TAM/src/tam_pv_multivariate_normal_approximation.cpp | 3 TAM-2.7-56/TAM/src/tamwle_helper_ccode.cpp | 3 432 files changed, 2623 insertions(+), 1236 deletions(-)
Title: Custom Inputs Widgets for Shiny
Description: Some custom inputs widgets to use in Shiny applications, like a toggle switch to replace checkboxes. And other components to pimp your apps.
Author: Victor Perrier [aut, cre],
Fanny Meyer [aut],
Silvio Moreto [ctb, cph] (bootstrap-select),
Ana Carolina [ctb, cph] (bootstrap-select),
caseyjhol [ctb, cph] (bootstrap-select),
Matt Bryson [ctb, cph] (bootstrap-select),
t0xicCode [ctb, cph] (bootstrap-select),
Mattia Larentis [ctb, cph] (Bootstrap Switch),
Emanuele Marchi [ctb, cph] (Bootstrap Switch),
Mark Otto [ctb] (Bootstrap library),
Jacob Thornton [ctb] (Bootstrap library),
Bootstrap contributors [ctb] (Bootstrap library),
Twitter, Inc [cph] (Bootstrap library),
Flatlogic [cph] (Awesome Bootstrap Checkbox),
mouse0270 [ctb, cph] (Material Design Switch),
Tristan Edwards [ctb, cph] (SweetAlert),
Fabian Lindfors [ctb, cph] (multi.js),
Daniel Eden [ctb, cph] (animate.css),
Ganapati V S [ctb, cph] (bttn.css)
Maintainer: Victor Perrier <victor.perrier@dreamrs.fr>
Diff between shinyWidgets versions 0.3.5 dated 2017-10-06 and 0.3.6 dated 2017-10-19
shinyWidgets-0.3.5/shinyWidgets/inst/images/boostrap_switch.png |only shinyWidgets-0.3.5/shinyWidgets/inst/images/material_switch.png |only shinyWidgets-0.3.5/shinyWidgets/inst/images/picker_input.png |only shinyWidgets-0.3.5/shinyWidgets/inst/www/shinyWidgets.min.js |only shinyWidgets-0.3.6/shinyWidgets/DESCRIPTION | 6 shinyWidgets-0.3.6/shinyWidgets/LICENSE | 3 shinyWidgets-0.3.6/shinyWidgets/MD5 | 60 shinyWidgets-0.3.6/shinyWidgets/NAMESPACE | 4 shinyWidgets-0.3.6/shinyWidgets/NEWS.md | 21 shinyWidgets-0.3.6/shinyWidgets/R/input-checkboxgroupbuttons.R | 51 shinyWidgets-0.3.6/shinyWidgets/R/input-radiogroupbuttons.R | 67 shinyWidgets-0.3.6/shinyWidgets/R/input-selectpicker.R | 13 shinyWidgets-0.3.6/shinyWidgets/R/input-sliderText.R |only shinyWidgets-0.3.6/shinyWidgets/R/input-switch.R | 5 shinyWidgets-0.3.6/shinyWidgets/R/shinyWidgetsGallery.R | 2 shinyWidgets-0.3.6/shinyWidgets/R/utils.R | 45 shinyWidgets-0.3.6/shinyWidgets/README.md | 42 shinyWidgets-0.3.6/shinyWidgets/inst/examples/garbage/bsplus.R |only shinyWidgets-0.3.6/shinyWidgets/inst/examples/garbage/example_sliderText.R |only shinyWidgets-0.3.6/shinyWidgets/inst/examples/shinyWidgets/global.R | 123 - shinyWidgets-0.3.6/shinyWidgets/inst/examples/shinyWidgets/server.R | 52 shinyWidgets-0.3.6/shinyWidgets/inst/examples/shinyWidgets/ui.R | 724 +++++----- shinyWidgets-0.3.6/shinyWidgets/inst/images/materialSwitch.png |only shinyWidgets-0.3.6/shinyWidgets/inst/images/pickerInput.png |only shinyWidgets-0.3.6/shinyWidgets/inst/images/sliderText.png |only shinyWidgets-0.3.6/shinyWidgets/inst/images/switchInput.png |only shinyWidgets-0.3.6/shinyWidgets/inst/www/selectPicker/picker-bindings.js | 21 shinyWidgets-0.3.6/shinyWidgets/inst/www/shinyWidgets-bindings.min.js | 2 shinyWidgets-0.3.6/shinyWidgets/inst/www/sliderText |only shinyWidgets-0.3.6/shinyWidgets/inst/www/switchInput/switch-bindings.js | 10 shinyWidgets-0.3.6/shinyWidgets/inst/www/uglify.R | 34 shinyWidgets-0.3.6/shinyWidgets/man/checkboxGroupButtons.Rd | 16 shinyWidgets-0.3.6/shinyWidgets/man/pickerInput.Rd | 10 shinyWidgets-0.3.6/shinyWidgets/man/radioGroupButtons.Rd | 11 shinyWidgets-0.3.6/shinyWidgets/man/sliderTextInput.Rd |only shinyWidgets-0.3.6/shinyWidgets/man/updateCheckboxGroupButtons.Rd | 4 shinyWidgets-0.3.6/shinyWidgets/man/updateRadioGroupButtons.Rd | 4 shinyWidgets-0.3.6/shinyWidgets/man/updateSliderTextInput.Rd |only 38 files changed, 788 insertions(+), 542 deletions(-)
Title: Submit R Calculations to a Slurm Cluster
Description: Functions that simplify submitting R scripts to a Slurm
workload manager, in part by automating the division of embarrassingly
parallel calculations across cluster nodes.
Author: Philippe Marchand [aut],
Mike Smorul [ctb],
Ian Carroll [ctb, cre]
Maintainer: Ian Carroll <icarroll@sesync.org>
Diff between rslurm versions 0.3.3 dated 2017-04-09 and 0.4.0 dated 2017-10-19
rslurm-0.3.3/rslurm/R/rslurm.R |only rslurm-0.3.3/rslurm/inst/doc/rslurm.R |only rslurm-0.3.3/rslurm/tests/testthat/test_slurm_apply.R |only rslurm-0.3.3/rslurm/tests/testthat/test_slurm_call.R |only rslurm-0.4.0/rslurm/DESCRIPTION | 22 - rslurm-0.4.0/rslurm/MD5 | 67 ++- rslurm-0.4.0/rslurm/R/cancel_print_cleanup.R | 16 rslurm-0.4.0/rslurm/R/get_slurm_out.R | 11 rslurm-0.4.0/rslurm/R/rslurm-package.R |only rslurm-0.4.0/rslurm/R/slurm_apply.R | 125 +++---- rslurm-0.4.0/rslurm/R/slurm_call.R | 104 +++--- rslurm-0.4.0/rslurm/R/slurm_job.R | 7 rslurm-0.4.0/rslurm/R/slurm_utils.R | 42 +- rslurm-0.4.0/rslurm/README.md | 84 +--- rslurm-0.4.0/rslurm/build/vignette.rds |binary rslurm-0.4.0/rslurm/inst/NEWS.Rd | 201 ++++++++--- rslurm-0.4.0/rslurm/inst/doc/rslurm.Rmd | 207 +++++------- rslurm-0.4.0/rslurm/inst/doc/rslurm.html | 95 ++--- rslurm-0.4.0/rslurm/inst/templates/slurm_run_R.txt | 18 - rslurm-0.4.0/rslurm/inst/templates/slurm_run_single_R.txt | 10 rslurm-0.4.0/rslurm/man/cancel_slurm.Rd | 4 rslurm-0.4.0/rslurm/man/cleanup_files.Rd | 4 rslurm-0.4.0/rslurm/man/get_slurm_out.Rd | 4 rslurm-0.4.0/rslurm/man/print_job_status.Rd | 8 rslurm-0.4.0/rslurm/man/rslurm-package.Rd | 131 ++----- rslurm-0.4.0/rslurm/man/slurm_apply.Rd | 56 +-- rslurm-0.4.0/rslurm/man/slurm_call.Rd | 72 ++-- rslurm-0.4.0/rslurm/man/slurm_job.Rd | 6 rslurm-0.4.0/rslurm/tests/testthat/test-local_slurm_apply.R |only rslurm-0.4.0/rslurm/tests/testthat/test-local_slurm_call.R |only rslurm-0.4.0/rslurm/tests/testthat/test-slurm_apply.R |only rslurm-0.4.0/rslurm/tests/testthat/test-slurm_call.R |only rslurm-0.4.0/rslurm/vignettes/_rslurm_test_apply |only rslurm-0.4.0/rslurm/vignettes/_rslurm_test_call |only rslurm-0.4.0/rslurm/vignettes/rslurm.Rmd | 207 +++++------- 35 files changed, 749 insertions(+), 752 deletions(-)
Title: Friendly Regular Expressions
Description: A friendly interface for the construction of regular expressions.
Author: Kevin Ushey [aut],
Jim Hester [aut, cre],
Robert Krzyzanowski [aut]
Maintainer: Jim Hester <james.f.hester@gmail.com>
Diff between rex versions 1.1.1 dated 2016-03-10 and 1.1.2 dated 2017-10-19
DESCRIPTION | 12 ++-- MD5 | 68 ++++++++++++------------ NAMESPACE | 5 + NEWS.md | 7 ++ R/match.R | 8 +- R/rex.R | 5 + README.md | 2 build/vignette.rds |binary inst/doc/log_parsing.R | 11 +-- inst/doc/log_parsing.Rmd | 11 +-- inst/doc/log_parsing.html | 85 +++++++++++++++++------------- inst/doc/url_parsing.R | 18 +++--- inst/doc/url_parsing.Rmd | 18 +++--- inst/doc/url_parsing.html | 94 +++++++++++++++++++-------------- man/capture.Rd | 3 - man/character_class.Rd | 14 ++-- man/character_class_escape.Rd | 6 +- man/counts.Rd | 10 +-- man/escape.Rd | 4 - man/group.Rd | 1 man/lookarounds.Rd | 3 - man/not.Rd | 1 man/or.Rd | 1 man/pipe.Rd | 1 man/re_matches.Rd | 3 - man/re_substitutes.Rd | 3 - man/regex.Rd | 2 man/register_shortcuts.Rd | 1 man/rex.Rd | 1 man/rex_mode.Rd | 1 man/shortcuts.Rd | 118 ------------------------------------------ man/single_shortcuts.Rd | 20 ------- man/wildcards.Rd | 6 +- tests/testthat/test-print.R | 6 -- vignettes/url_parsing.Rmd | 2 35 files changed, 220 insertions(+), 331 deletions(-)
Title: Reliable Adaption of Big Data with R
Description: Methods to use 'dplyr' remote data sources ('SQL' databases,
'Spark' 2.0.0 and above) in a reliable "generic" fashion (generic meaning
user code works similarly on all such sources, without needing per-source
adaption).
Adds convenience functions to make such tasks more like
working with an in-memory R 'data.frame'.
Author: John Mount [aut, cre],
Nina Zumel [aut],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between replyr versions 0.5.3 dated 2017-08-29 and 0.5.4 dated 2017-10-19
DESCRIPTION | 25 ++++++---- MD5 | 61 +++++++++++++------------- NAMESPACE | 1 NEWS.md | 6 ++ R/addIds.R | 2 R/copyToFrom.R | 2 R/dim.R | 30 ++++++++++--- R/joinController.R | 18 +++---- R/nrow.R | 39 +++++++++++------ R/replyr.R | 4 - R/rowscols.R | 4 - R/summary.R | 6 +- R/tempNameGenerator.R | 10 +--- README.md | 18 ++++--- build/vignette.rds |binary inst/doc/DependencySorting.html | 75 ++++++++++++++++---------------- inst/doc/NArm.html | 55 +++++++++++------------- inst/doc/ParametricExample.html | 10 ++-- inst/doc/coalesce.html | 35 +++++++-------- inst/doc/joinController.html | 87 ++++++++++++++++++-------------------- inst/doc/letExample.html | 42 +++++++++--------- inst/doc/replyr.html | 67 ++++++++++++++--------------- inst/doc/summary.html | 23 ++++------ man/makeTempNameGenerator.Rd | 4 - man/replyr.Rd | 4 - man/replyr_dim.Rd | 6 +- man/replyr_moveValuesToColumns.Rd | 2 man/replyr_moveValuesToRows.Rd | 2 man/replyr_ncol.Rd |only man/replyr_nrow.Rd | 1 man/replyr_summary.Rd | 2 man/topoSortTables.Rd | 2 32 files changed, 339 insertions(+), 304 deletions(-)
Title: Descriptive Statistics, Transition Plots, and More
Description: Tools for making the descriptive "Table 1" used in medical
articles, a transition plot for showing changes between categories,
flow charts by extending the grid package, a method for
variable selection based on the SVD, Bézier lines with arrows complementing the
ones in the 'grid' package, and more.
Author: Max Gordon <max@gforge.se>
Maintainer: Max Gordon <max@gforge.se>
Diff between Gmisc versions 1.4.1 dated 2016-10-08 and 1.5 dated 2017-10-19
DESCRIPTION | 17 MD5 | 179 +-- NAMESPACE | 3 NEWS | 10 R/RcppExports.R | 4 R/assert.R | 20 R/boxGrobs.R | 283 ++++- R/getDescriptionStatsBy.R | 78 + R/mergeDesc.R | 20 README.md |only build/vignette.rds |binary inst/doc/Descriptives.html | 754 ++++---------- inst/doc/Grid-based_flowcharts.R | 55 - inst/doc/Grid-based_flowcharts.Rmd | 58 - inst/doc/Grid-based_flowcharts.html | 74 + inst/doc/Transition-class.Rmd | 2 inst/doc/Transition-class.html | 18 inst/doc/transitionPlot.Rmd | 4 inst/doc/transitionPlot.html | 26 inst/rmarkdown/templates/CONSORT_v2010_docx/template.yaml | 2 inst/rmarkdown/templates/STROBE_v4_docx/template.yaml | 2 man/Gmisc-deprecated.Rd | 3 man/Transition-class.Rd | 5 man/assert.Rd | 15 man/bezierArrowGradient.Rd | 2 man/bezierArrowSmpl.Rd | 1 man/box.Rd | 18 man/boxPropGrob.Rd | 34 man/calculateLinesAndArrow.Rd | 1 man/connect.Rd | 30 man/convertShowMissing.Rd | 1 man/coords.Rd |only man/copyAllNewAttributes.Rd | 1 man/descGetMissing.Rd | 1 man/describeFactors.Rd | 1 man/describeMean.Rd | 1 man/describeMedian.Rd | 1 man/describeProp.Rd | 1 man/distance.Rd |only man/docx_document.Rd | 1 man/fastDoCall.Rd | 2 man/figCapNo.Rd | 1 man/figCapNoLast.Rd | 1 man/figCapNoNext.Rd | 1 man/getAbsoluteWidth.Rd | 1 man/getBezierAdj4Arrw.Rd | 1 man/getDescriptionStatsBy.Rd | 10 man/getGridVal.Rd | 1 man/getPval.Rd | 6 man/getSvdMostInfluential.Rd | 1 man/getVectorAngle.Rd | 1 man/gnrlBezierPoints.Rd | 1 man/htmlTable_latex.Rd | 5 man/insertRowAndKeepAttr.Rd | 1 man/isHorizontal.Rd | 1 man/mergeDesc.Rd | 2 man/mergeLists.Rd | 1 man/mergeLists_internal.Rd | 1 man/prCaptionFix.Rd | 1 man/prDescGetAndValidateDefaultRef.Rd | 1 man/prFtpHeaderStyle.Rd | 1 man/prFtpOtherChanges.Rd | 1 man/prFtpOtherRemoval.Rd | 1 man/prFtpScriptRemoval.Rd | 1 man/prGetStatistics.Rd | 1 man/prGetTextGrobCex.Rd | 1 man/prGridPlotTitle.Rd | 1 man/prPasteVec.Rd | 1 man/prPushMarginViewport.Rd | 1 man/prSetMaxWidth.Rd | 1 man/prTcMatchClr.Rd | 1 man/prTcPlotArrows.Rd | 1 man/prTcPlotBoxColumn.Rd | 1 man/prTcValidateAndPrepClr.Rd | 1 man/prTpGetBoxPositions.Rd | 1 man/prTpGetBoxPropClr.Rd | 1 man/prTpGetBoxSizedTextGrob.Rd | 1 man/prTpGetColors.Rd | 1 man/prTpPlotArrows.Rd | 1 man/prTpPlotBox.Rd | 1 man/prTpPlotBoxes.Rd | 1 man/transitionPlot.Rd | 1 man/validateAndConvertVectorInputs.Rd | 1 src/RcppExports.cpp | 15 tests/testthat/Rplots.pdf |binary tests/testthat/test-boxGrobs.R | 12 tests/testthat/test-figCapNo.R | 25 tests/testthat/test-getDescriptionStats.R | 435 ++++++++ tests/visual_tests/Full_test_suite.Rmd | 2 vignettes/Grid-based_flowcharts.Rmd | 58 - vignettes/Transition-class.Rmd | 2 vignettes/transitionPlot.Rmd | 4 92 files changed, 1435 insertions(+), 907 deletions(-)
Title: Conditional Formatting in Data Frames
Description: Apply and visualize conditional formatting to data frames in R.
It renders a data frame with cells formatted according to
criteria defined by rules, using a tidy evaluation syntax. The table is
printed either opening a web browser or within the 'RStudio' viewer if
available. The conditional formatting rules allow to highlight cells
matching a condition or add a gradient background to a given column. This
package supports both 'HTML' and 'LaTeX' outputs in 'knitr' reports, and
exporting to an 'xlsx' file.
Author: Sergio Oller Moreno [aut, cph, cre]
Maintainer: Sergio Oller Moreno <sergioller@gmail.com>
Diff between condformat versions 0.6.0 dated 2017-05-18 and 0.7.0 dated 2017-10-19
condformat-0.6.0/condformat/man/get_css_field.Rd |only condformat-0.6.0/condformat/man/lock_cells.Rd |only condformat-0.7.0/condformat/DESCRIPTION | 13 condformat-0.7.0/condformat/MD5 | 91 ++-- condformat-0.7.0/condformat/NAMESPACE | 7 condformat-0.7.0/condformat/NEWS | 13 condformat-0.7.0/condformat/R/condformat.R | 30 - condformat-0.7.0/condformat/R/condformat_render.R | 85 +++- condformat-0.7.0/condformat/R/rule_css.R |only condformat-0.7.0/condformat/R/rule_fill_discrete.R | 153 ++++++- condformat-0.7.0/condformat/R/rule_fill_gradient.R | 135 +++++- condformat-0.7.0/condformat/R/rule_fill_gradient2.R | 135 ++++++ condformat-0.7.0/condformat/R/rule_helper.R | 53 +- condformat-0.7.0/condformat/R/shiny.R | 5 condformat-0.7.0/condformat/R/show_columns.R | 137 +++++- condformat-0.7.0/condformat/R/show_rows.R | 94 +++- condformat-0.7.0/condformat/R/theme_htmlTable.R | 27 + condformat-0.7.0/condformat/README.md | 188 ++++----- condformat-0.7.0/condformat/build/vignette.rds |binary condformat-0.7.0/condformat/inst/doc/introduction.R | 16 condformat-0.7.0/condformat/inst/doc/introduction.Rmd | 22 - condformat-0.7.0/condformat/inst/doc/introduction.html | 198 +++++----- condformat-0.7.0/condformat/inst/shinyexample/server.R | 10 condformat-0.7.0/condformat/inst/shinyexample/ui.R | 1 condformat-0.7.0/condformat/man/condformat-shiny.Rd | 9 condformat-0.7.0/condformat/man/condformat.Rd | 19 condformat-0.7.0/condformat/man/condformat2excel.Rd | 15 condformat-0.7.0/condformat/man/plus-.condformat_tbl.Rd | 4 condformat-0.7.0/condformat/man/reexports.Rd | 4 condformat-0.7.0/condformat/man/rule_css.Rd |only condformat-0.7.0/condformat/man/rule_fill_discrete.Rd | 38 + condformat-0.7.0/condformat/man/rule_fill_discrete_.Rd | 11 condformat-0.7.0/condformat/man/rule_fill_discrete_old.Rd |only condformat-0.7.0/condformat/man/rule_fill_gradient.Rd | 39 + condformat-0.7.0/condformat/man/rule_fill_gradient2.Rd | 40 +- condformat-0.7.0/condformat/man/rule_fill_gradient2_.Rd | 9 condformat-0.7.0/condformat/man/rule_fill_gradient2_old.Rd |only condformat-0.7.0/condformat/man/rule_fill_gradient_.Rd | 9 condformat-0.7.0/condformat/man/rule_fill_gradient_old.Rd |only condformat-0.7.0/condformat/man/show_columns.Rd | 36 - condformat-0.7.0/condformat/man/show_columns_.Rd |only condformat-0.7.0/condformat/man/show_columns_old.Rd |only condformat-0.7.0/condformat/man/show_rows.Rd | 24 - condformat-0.7.0/condformat/man/show_rows_old.Rd |only condformat-0.7.0/condformat/man/theme_htmlTable.Rd | 7 condformat-0.7.0/condformat/tests/testthat/test_rendering.R | 22 + condformat-0.7.0/condformat/tests/testthat/test_rule_css.R |only condformat-0.7.0/condformat/tests/testthat/test_rule_fill_discrete.R | 152 ++++++- condformat-0.7.0/condformat/tests/testthat/test_rule_fill_gradient.R | 47 ++ condformat-0.7.0/condformat/tests/testthat/test_show.R | 90 ++++ condformat-0.7.0/condformat/tests/testthat/test_theme_htmlTable.R | 12 condformat-0.7.0/condformat/vignettes/introduction.Rmd | 22 - 52 files changed, 1448 insertions(+), 574 deletions(-)
Title: Estimation of Causal Effects with Generalized Additive Models
Description: Implements various estimators for average
treatment effects - an inverse probability weighted (IPW) estimator,
an augmented inverse probability weighted (AIPW) estimator, and a standard
regression estimator - that make use of generalized additive models for
the treatment assignment model and/or outcome model. See: Glynn, Adam N.
and Kevin M. Quinn. 2010. "An Introduction to the Augmented Inverse
Propensity Weighted Estimator." Political Analysis. 18: 36-56.
Author: Adam Glynn <adam.glynn@emory.edu>,
Kevin Quinn <kmq@umich.edu>
Maintainer: Kevin Quinn <kmq@umich.edu>
Diff between CausalGAM versions 0.1-3 dated 2010-02-11 and 0.1-4 dated 2017-10-19
CausalGAM-0.1-3/CausalGAM/HISTORY |only CausalGAM-0.1-3/CausalGAM/LICENSE |only CausalGAM-0.1-4/CausalGAM/DESCRIPTION | 28 +-- CausalGAM-0.1-4/CausalGAM/MD5 |only CausalGAM-0.1-4/CausalGAM/NAMESPACE | 9 - CausalGAM-0.1-4/CausalGAM/R/CausalGAM.R | 222 +++++++++++++------------- CausalGAM-0.1-4/CausalGAM/R/balanceIPW.R | 4 CausalGAM-0.1-4/CausalGAM/R/zzz.R | 6 CausalGAM-0.1-4/CausalGAM/man/balance.IPW.Rd | 4 CausalGAM-0.1-4/CausalGAM/man/estimate.ATE.Rd | 4 10 files changed, 141 insertions(+), 136 deletions(-)
Title: Perform and Display Google Trends Queries
Description: An interface for retrieving and displaying the information returned
online by Google Trends is provided. Trends (number of hits) over the time as
well as geographic representation of the results can be displayed.
Author: Philippe Massicotte [aut, cre],
Dirk Eddelbuettel [aut]
Maintainer: Philippe Massicotte <pmassicotte@hotmail.com>
Diff between gtrendsR versions 1.3.5 dated 2016-11-03 and 1.4.0 dated 2017-10-19
gtrendsR-1.3.5/gtrendsR/R/init.R |only gtrendsR-1.3.5/gtrendsR/R/sport_trend.R |only gtrendsR-1.3.5/gtrendsR/data/sport_trend.rda |only gtrendsR-1.3.5/gtrendsR/man/gconnect.Rd |only gtrendsR-1.3.5/gtrendsR/man/sport_trend.Rd |only gtrendsR-1.4.0/gtrendsR/DESCRIPTION | 14 gtrendsR-1.4.0/gtrendsR/MD5 | 33 - gtrendsR-1.4.0/gtrendsR/NAMESPACE | 8 gtrendsR-1.4.0/gtrendsR/NEWS.md | 16 gtrendsR-1.4.0/gtrendsR/R/countries.R | 2 gtrendsR-1.4.0/gtrendsR/R/gtrends.R | 730 +++++---------------------- gtrendsR-1.4.0/gtrendsR/R/related_queries.R |only gtrendsR-1.4.0/gtrendsR/R/related_topics.R |only gtrendsR-1.4.0/gtrendsR/R/sysdata.rda |binary gtrendsR-1.4.0/gtrendsR/R/zzz.R |only gtrendsR-1.4.0/gtrendsR/README.md | 45 - gtrendsR-1.4.0/gtrendsR/data/categories.rda |binary gtrendsR-1.4.0/gtrendsR/data/countries.rda |binary gtrendsR-1.4.0/gtrendsR/man/categories.Rd | 1 gtrendsR-1.4.0/gtrendsR/man/countries.Rd | 3 gtrendsR-1.4.0/gtrendsR/man/gtrends.Rd | 153 ++--- gtrendsR-1.4.0/gtrendsR/man/plot.gtrends.Rd |only 22 files changed, 277 insertions(+), 728 deletions(-)
Title: Easy Model-Builder Functions for 'OpenMx'
Description: Utilities for building certain kinds of common matrices and models in
the extended structural equation modeling package, 'OpenMx'.
Author: Michael D. Hunter [aut, cre],
Joshua N. Pritikin [ctb]
Maintainer: Michael D. Hunter <mhunter.ou@gmail.com>
Diff between EasyMx versions 0.2 dated 2017-10-17 and 0.2-1 dated 2017-10-19
DESCRIPTION | 6 +++--- MD5 | 2 +- 2 files changed, 4 insertions(+), 4 deletions(-)
Title: Bootstrapped Differences of Time Series
Description: Analyze differences among time series curves with p-value adjustment for multiple comparisons introduced in Oleson et al (2015) <DOI:10.1177/0962280215607411>.
Author: Michael Seedorff, Jacob Oleson, Grant Brown, Joseph Cavanaugh, and Bob McMurray
Maintainer: Michael Seedorff <michael-seedorff@uiowa.edu>
Diff between bdots versions 0.1.13 dated 2017-06-15 and 0.1.15 dated 2017-10-19
DESCRIPTION | 8 - MD5 | 21 +- NAMESPACE | 5 R/doubleGaussRefit.r | 9 - R/estDgaussCurve.r | 39 +++-- R/estLogisticCurve.r | 27 ++- R/logisticRefit.r | 9 - build/vignette.rds |binary inst/doc/bdots.R | 396 +++++++++++++++++++++++++-------------------------- inst/doc/bdots.pdf |binary man/refit.Rd | 6 man/tsmultcomp.Rd |only 12 files changed, 275 insertions(+), 245 deletions(-)
Title: Parametric Voice Synthesis
Description: Tools for sound synthesis and acoustic analysis.
Performs parametric synthesis of sounds with harmonic and noise components
such as animal vocalizations or human voice. Also includes tools for
spectral analysis, pitch tracking, audio segmentation, self-similarity
matrices, and morphing.
Author: Andrey Anikin [aut, cre]
Maintainer: Andrey Anikin <rty.anik@rambler.ru>
Diff between soundgen versions 1.0.0 dated 2017-09-04 and 1.1.0 dated 2017-10-19
soundgen-1.0.0/soundgen/R/sourceSpectrum.R |only soundgen-1.1.0/soundgen/DESCRIPTION | 13 soundgen-1.1.0/soundgen/MD5 | 107 +- soundgen-1.1.0/soundgen/NAMESPACE | 4 soundgen-1.1.0/soundgen/NEWS |only soundgen-1.1.0/soundgen/R/analyze.R | 6 soundgen-1.1.0/soundgen/R/data.R | 9 soundgen-1.1.0/soundgen/R/formants.R |only soundgen-1.1.0/soundgen/R/matchPars.R | 8 soundgen-1.1.0/soundgen/R/morph.R | 98 +- soundgen-1.1.0/soundgen/R/presets.R | 265 ++--- soundgen-1.1.0/soundgen/R/rolloff.R |only soundgen-1.1.0/soundgen/R/segment.R | 1 soundgen-1.1.0/soundgen/R/smoothContours.R | 86 + soundgen-1.1.0/soundgen/R/soundgen.R | 257 +++-- soundgen-1.1.0/soundgen/R/source.R | 466 ++++++++-- soundgen-1.1.0/soundgen/R/utilities_math.R | 79 + soundgen-1.1.0/soundgen/R/utilities_soundgen.R | 308 ++++-- soundgen-1.1.0/soundgen/README.md | 25 soundgen-1.1.0/soundgen/data/defaults.rda |binary soundgen-1.1.0/soundgen/data/notesDict.rda |binary soundgen-1.1.0/soundgen/data/permittedValues.rda |binary soundgen-1.1.0/soundgen/data/presets.rda |binary soundgen-1.1.0/soundgen/inst/CITATION |only soundgen-1.1.0/soundgen/inst/doc/acoustic_analysis.R | 40 soundgen-1.1.0/soundgen/inst/doc/acoustic_analysis.Rmd | 51 - soundgen-1.1.0/soundgen/inst/doc/acoustic_analysis.html | 94 -- soundgen-1.1.0/soundgen/inst/doc/sound_generation.R | 219 ++-- soundgen-1.1.0/soundgen/inst/doc/sound_generation.Rmd | 352 ++++--- soundgen-1.1.0/soundgen/inst/doc/sound_generation.html | 394 +++++--- soundgen-1.1.0/soundgen/inst/shiny/soundgen_main/server.R | 236 +++-- soundgen-1.1.0/soundgen/inst/shiny/soundgen_main/ui.R | 48 - soundgen-1.1.0/soundgen/inst/shiny/soundgen_main/www/temp.wav |binary soundgen-1.1.0/soundgen/man/HzToSemitones.Rd | 6 soundgen-1.1.0/soundgen/man/analyze.Rd | 5 soundgen-1.1.0/soundgen/man/beat.Rd |only soundgen-1.1.0/soundgen/man/convertStringToFormants.Rd | 7 soundgen-1.1.0/soundgen/man/defaults.Rd | 2 soundgen-1.1.0/soundgen/man/estimateVTL.Rd |only soundgen-1.1.0/soundgen/man/fart.Rd |only soundgen-1.1.0/soundgen/man/flatEnv.Rd |only soundgen-1.1.0/soundgen/man/generateEpoch.Rd |only soundgen-1.1.0/soundgen/man/generateGC.Rd |only soundgen-1.1.0/soundgen/man/generateHarmonics.Rd | 41 soundgen-1.1.0/soundgen/man/generateNoise.Rd | 20 soundgen-1.1.0/soundgen/man/getBandwidth.Rd |only soundgen-1.1.0/soundgen/man/getEnv.Rd |only soundgen-1.1.0/soundgen/man/getFormantDispersion.Rd |only soundgen-1.1.0/soundgen/man/getGlottalCycles.Rd | 7 soundgen-1.1.0/soundgen/man/getRolloff.Rd | 21 soundgen-1.1.0/soundgen/man/getSigmoid.Rd | 8 soundgen-1.1.0/soundgen/man/getSmoothContour.Rd | 14 soundgen-1.1.0/soundgen/man/getSpectralEnvelope.Rd | 70 - soundgen-1.1.0/soundgen/man/killDC.Rd |only soundgen-1.1.0/soundgen/man/matchPars.Rd | 4 soundgen-1.1.0/soundgen/man/notesDict.Rd | 11 soundgen-1.1.0/soundgen/man/reformatAnchors.Rd |only soundgen-1.1.0/soundgen/man/reformatFormants.Rd |only soundgen-1.1.0/soundgen/man/rnorm_bounded.Rd | 2 soundgen-1.1.0/soundgen/man/semitonesToHz.Rd | 6 soundgen-1.1.0/soundgen/man/soundgen.Rd | 75 - soundgen-1.1.0/soundgen/vignettes/acoustic_analysis.Rmd | 51 - soundgen-1.1.0/soundgen/vignettes/sound_generation.Rmd | 352 ++++--- 63 files changed, 2382 insertions(+), 1486 deletions(-)
Title: Credit Risk Scorecard
Description: Makes the development of credit risk scorecard easily and efficiently by providing functions such as information value, variable filter, optimal woe binning, scorecard scaling and performance evaluation etc. The references including:
1. Refaat, M. (2011, ISBN: 9781447511199). Credit Risk Scorecard: Development and Implementation Using SAS.
2. Siddiqi, N. (2006, ISBN: 9780471754510). Credit risk scorecards. Developing and Implementing Intelligent Credit Scoring.
Author: Shichen Xie
Maintainer: Shichen Xie <xie@shichen.name>
Diff between scorecard versions 0.1.1 dated 2017-10-17 and 0.1.2 dated 2017-10-19
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- NEWS.md | 4 ++++ R/perf.R | 13 ++++++++++++- R/var_filter.R | 4 ++-- 5 files changed, 26 insertions(+), 11 deletions(-)
Title: Bayesian Methods for Image Segmentation using a Potts Model
Description: Various algorithms for segmentation of 2D and 3D images, such
as computed tomography and satellite remote sensing. This package implements
Bayesian image analysis using the hidden Potts model with external field
prior. Latent labels are sampled using chequerboard updating or Swendsen-Wang.
Algorithms for the smoothing parameter include pseudolikelihood, path sampling,
the exchange algorithm, approximate Bayesian computation (ABC-MCMC and ABC-SMC),
and Bayesian indirect likelihood (BIL).
Author: Matt Moores [aut, cre] (0000-0003-4531-3572),
Kerrie Mengersen [aut, ths] (0000-0001-8625-9168),
Dai Feng [ctb]
Maintainer: Matt Moores <M.T.Moores@warwick.ac.uk>
Diff between bayesImageS versions 0.4-0 dated 2017-03-21 and 0.4-1 dated 2017-10-19
DESCRIPTION | 27 ++++---- MD5 | 62 ++++++++++--------- NEWS.md | 31 +++++++-- R/bayesImageS.R | 8 +- R/getBlocks.R | 18 ++--- R/getEdges.R | 32 +++++----- R/getNeighbors.R | 58 +++++++++--------- R/mcmcPotts.R | 17 ++--- R/smcPotts.R | 10 ++- README.md | 144 +++++++++++++++++++++++++++++++++++++--------- build/vignette.rds |binary inst/doc/introduction.pdf |binary inst/image |only man/bayesImageS.Rd | 19 ++---- man/exactPotts.Rd | 3 man/getBlocks.Rd | 16 ++--- man/getEdges.Rd | 33 +++++----- man/getNeighbors.Rd | 59 +++++++++--------- man/gibbsGMM.Rd | 1 man/gibbsNorm.Rd | 1 man/initSedki.Rd | 5 - man/mcmcPotts.Rd | 12 +-- man/mcmcPottsNoData.Rd | 1 man/smcPotts.Rd | 1 man/sufficientStat.Rd | 1 man/swNoData.Rd | 8 -- man/testResample.Rd | 8 ++ src/bayesImageS_init.cpp | 4 - src/mcmcPotts.cpp | 26 +++----- src/mcmcPotts.h | 4 - src/smcPotts.cpp | 7 +- 31 files changed, 353 insertions(+), 263 deletions(-)
Title: Epidemiological Tool for Contact Tracing
Description: Routines for epidemiological contact tracing
and visualisation of network of contacts.
Author: Maria Noremark [aut],
Stefan Widgren [aut, cre]
Maintainer: Stefan Widgren <stefan.widgren@gmail.com>
Diff between EpiContactTrace versions 0.11.0 dated 2017-07-20 and 0.12.0 dated 2017-10-19
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS | 7 +++++++ inst/CITATION | 8 ++++---- 4 files changed, 17 insertions(+), 10 deletions(-)
More information about EpiContactTrace at CRAN
Permanent link
Title: Bayesian Monotonic Regression Using a Marked Point Process
Construction
Description: An extended version of the nonparametric Bayesian monotonic regression procedure described in Saarela & Arjas (2011) <DOI:10.1111/j.1467-9469.2010.00716.x>, allowing for multiple additive monotonic components in the linear predictor, and time-to-event outcomes through case-base sampling. The extension and its applications, including estimation of absolute risks, are described in Saarela & Arjas (2015) <DOI:10.1111/sjos.12125>.
Author: Olli Saarela
Maintainer: Olli Saarela <olli.saarela@utoronto.ca>
Diff between monoreg versions 1.1 dated 2017-06-29 and 1.2 dated 2017-10-19
DESCRIPTION | 9 MD5 | 12 configure | 1706 +------------------------------------------------------ configure.ac | 23 src/Makevars.in | 11 src/Makevars.win | 9 src/sampler.c | 21 7 files changed, 113 insertions(+), 1678 deletions(-)
Title: Install Packages from Snapshots on the Checkpoint Server for
Reproducibility
Description: The goal of checkpoint is to solve the problem of package
reproducibility in R. Specifically, checkpoint allows you to install packages
as they existed on CRAN on a specific snapshot date as if you had a CRAN time
machine. To achieve reproducibility, the checkpoint() function installs the
packages required or called by your project and scripts to a local library
exactly as they existed at the specified point in time. Only those packages
are available to your project, thereby avoiding any package updates that came
later and may have altered your results. In this way, anyone using checkpoint's
checkpoint() can ensure the reproducibility of your scripts or projects at any
time. To create the snapshot archives, once a day (at midnight UTC) Microsoft
refreshes the Austria CRAN mirror on the "Microsoft R Archived Network"
server (<https://mran.microsoft.com/>). Immediately after completion
of the rsync mirror process, the process takes a snapshot, thus creating the
archive. Snapshot archives exist starting from 2014-09-17.
Author: Microsoft Corporation
Maintainer: Rich Calaway <richcala@microsoft.com>
Diff between checkpoint versions 0.4.1 dated 2017-06-26 and 0.4.2 dated 2017-10-19
DESCRIPTION | 12 - MD5 | 16 - build/vignette.rds |binary inst/doc/checkpoint.html | 246 +++++++++++++------------ inst/doc/managing-checkpoint-archives.html | 224 ++++++++++++---------- tests/testthat/test-0-is-404.R | 45 +++- tests/testthat/test-2-snapshot-dates.R | 22 +- tests/testthat/test-7-anyRfiles.R | 26 +- tests/testthat/test-8-authoriseFileSystemUse.R | 25 +- 9 files changed, 344 insertions(+), 272 deletions(-)
Title: Spatio-Temporal Bayesian Modelling
Description: Fits, spatially predicts and temporally forecasts large amounts of space-time data using [1] Bayesian Gaussian Process (GP) Models, [2] Bayesian Auto-Regressive (AR) Models, and [3] Bayesian Gaussian Predictive Processes (GPP) based AR Models for spatio-temporal big-n problems. Bakar and Sahu (2015) <doi:10.18637/jss.v063.i15>.
Author: K. Shuvo Bakar & Sujit K. Sahu
Maintainer: Shuvo Bakar <shuvo.bakar@gmail.com>
Diff between spTimer versions 3.0-0 dated 2017-10-15 and 3.0-1 dated 2017-10-19
spTimer-3.0-0/spTimer/man/spT.check.locations.Rd |only spTimer-3.0-0/spTimer/man/spT.keep.morethan.dist.Rd |only spTimer-3.0-1/spTimer/DESCRIPTION | 14 spTimer-3.0-1/spTimer/MD5 | 40 +- spTimer-3.0-1/spTimer/NAMESPACE | 1 spTimer-3.0-1/spTimer/R/spGP.r | 11 spTimer-3.0-1/spTimer/R/spGPP.r | 66 +++- spTimer-3.0-1/spTimer/R/useful_commands.R | 8 spTimer-3.0-1/spTimer/inst/ChangeLog | 6 spTimer-3.0-1/spTimer/man/NYdata.Rd | 15 spTimer-3.0-1/spTimer/man/predict.spT.Rd | 306 ++++++++++++++++---- spTimer-3.0-1/spTimer/man/spT.Gibbs.Rd | 195 +++++++++++- spTimer-3.0-1/spTimer/man/spT.decay.Rd | 4 spTimer-3.0-1/spTimer/man/spT.geodist.Rd | 4 spTimer-3.0-1/spTimer/man/spT.grid.coords.Rd | 9 spTimer-3.0-1/spTimer/man/spT.initials.Rd | 6 spTimer-3.0-1/spTimer/man/spT.pCOVER.Rd | 4 spTimer-3.0-1/spTimer/man/spT.priors.Rd | 4 spTimer-3.0-1/spTimer/man/spT.segment.plot.Rd | 4 spTimer-3.0-1/spTimer/man/spT.subset.Rd | 4 spTimer-3.0-1/spTimer/man/spT.time.Rd | 4 spTimer-3.0-1/spTimer/man/spT.validation.Rd | 4 22 files changed, 545 insertions(+), 164 deletions(-)
Title: Multiple Automatic Forecast Selection
Description: Fits several forecast models available from the forecast package
and selects the best one according to an error metric. Its main function
is select_forecast().
Author: Sillas Gonzaga [aut, cre]
Maintainer: Sillas Gonzaga <sillas.gonzaga@gmail.com>
Diff between mafs versions 0.0.2 dated 2017-01-25 and 0.0.3 dated 2017-10-19
DESCRIPTION | 8 +++---- MD5 | 17 ++++++++------- NEWS.md |only R/main.R | 48 ++++++++++++++++++++++++++++++-------------- man/apply_all_models.Rd | 7 +++--- man/apply_selected_model.Rd | 5 ++-- man/available_models.Rd | 1 man/error_metrics.Rd | 1 man/gg_fit.Rd | 5 +--- man/select_forecast.Rd | 7 ++++-- 10 files changed, 60 insertions(+), 39 deletions(-)
Title: Data Visualization for Statistics in Social Science
Description: Collection of plotting and table output functions for data
visualization. Results of various statistical analyses (that are commonly used
in social sciences) can be visualized using this package, including simple and
cross tabulated frequencies, histograms, box plots, (generalized) linear models,
mixed effects models, principal component analysis and correlation matrices,
cluster analyses, scatter plots, stacked scales, effects plots of regression
models (including interaction terms) and much more. This package supports
labelled data.
Author: Daniel Lüdecke [aut, cre],
Carsten Schwemmer [ctb]
Maintainer: Daniel Lüdecke <d.luedecke@uke.de>
Diff between sjPlot versions 2.3.3 dated 2017-08-23 and 2.4.0 dated 2017-10-19
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Title: Statistical Methods and Models for Claims Reserving in General
Insurance
Description: Various statistical methods and models which are
typically used for the estimation of outstanding claims reserves
in general insurance, including those to estimate the claims
development result as required under Solvency II.
Author: Markus Gesmann [aut, cre],
Daniel Murphy [aut],
Yanwei (Wayne) Zhang [aut],
Alessandro Carrato [aut],
Giuseppe Crupi [aut],
Christophe Dutang [ctb],
Arnaud Lacoume [ctb],
Arthur Charpentier [ctb],
Mario Wuthrich [aut],
Fabio Concina [aut]
Maintainer: Markus Gesmann <markus.gesmann@googlemail.com>
Diff between ChainLadder versions 0.2.4 dated 2017-01-01 and 0.2.5 dated 2017-10-19
DESCRIPTION | 8 +- MD5 | 24 +++--- R/MackChainLadderFunctions.R | 10 +- THANKS | 4 - build/vignette.rds |binary inst/doc/ChainLadder.Rnw | 2 inst/doc/ChainLadder.pdf |binary inst/doc/NEWS.Rmd | 4 + inst/doc/NEWS.html | 16 +++- inst/unitTests/runit.MackChainLadder.R | 117 +++++++++++++++++++++++++++++++++ vignettes/ChainLadder.Rnw | 2 vignettes/ChainLadder.bib | 2 vignettes/NEWS.Rmd | 4 + 13 files changed, 165 insertions(+), 28 deletions(-)