Title: Generating Various Numerical Representation Schemes for Protein
Sequences
Description: Comprehensive toolkit for generating various numerical
features of protein sequences described in Xiao et al. (2015)
<DOI:10.1093/bioinformatics/btv042>. For full functionality,
the software 'ncbi-blast+' is needed, see
<https://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE_TYPE=BlastDocs&DOC_TYPE=Download>
for more information.
Author: Nan Xiao [aut, cre] (0000-0002-0250-5673),
Qing-Song Xu [aut],
Dong-Sheng Cao [aut]
Maintainer: Nan Xiao <me@nanx.me>
Diff between protr versions 1.4-2 dated 2017-09-28 and 1.5-0 dated 2017-11-17
DESCRIPTION | 14 +-- MD5 | 28 +++--- NEWS.md | 10 ++ R/desc-07-CTDC.R | 2 R/desc-07-CTDCClass.R | 2 R/desc-08-CTDT.R | 2 R/desc-08-CTDTClass.R | 2 R/desc-09-CTDD.R | 38 ++------- R/desc-09-CTDDClass.R | 2 README.md | 118 ++++++++++++++--------------- build/vignette.rds |binary inst/doc/protr.R | 2 inst/doc/protr.Rmd | 201 +++++++++++++++++++++++++------------------------- inst/doc/protr.html | 200 ++++++++++++++++++++++++------------------------- vignettes/protr.Rmd | 201 +++++++++++++++++++++++++------------------------- 15 files changed, 409 insertions(+), 413 deletions(-)
Title: Model and Solve Mixed Integer Linear Programs
Description: Model mixed integer linear programs in an algebraic way directly in R.
The model is solver-independent and thus offers the possibility
to solve a model with different solvers. It currently only supports
linear constraints and objective functions. See the 'ompr'
website <https://dirkschumacher.github.io/ompr> for more information,
documentation and examples.
Author: Dirk Schumacher [aut, cre]
Maintainer: Dirk Schumacher <mail@dirk-schumacher.net>
Diff between ompr versions 0.6.0 dated 2017-04-17 and 0.7.0 dated 2017-11-17
ompr-0.6.0/ompr/LICENSE |only ompr-0.7.0/ompr/DESCRIPTION | 16 ++++---- ompr-0.7.0/ompr/MD5 | 25 ++++++------- ompr-0.7.0/ompr/NEWS.md | 12 ++++++ ompr-0.7.0/ompr/R/RcppExports.R | 4 +- ompr-0.7.0/ompr/R/class-model.R | 45 ++++++++++++++---------- ompr-0.7.0/ompr/R/class-solution.R | 9 ++-- ompr-0.7.0/ompr/R/helper.R | 7 ++- ompr-0.7.0/ompr/R/model-api.R | 19 +++++----- ompr-0.7.0/ompr/man/extract_constraints.Rd | 2 - ompr-0.7.0/ompr/man/objective_function.Rd | 2 - ompr-0.7.0/ompr/src/RcppExports.cpp | 4 +- ompr-0.7.0/ompr/src/ompr-init.c | 8 ++-- ompr-0.7.0/ompr/tests/testthat/test-model-api.R | 28 ++++++++++++-- 14 files changed, 112 insertions(+), 69 deletions(-)
Title: Wrap R Functions for Debugging and Parametric Programming
Description: Powerful tools for writing and debugging R code. Provides: 'let()' which converts non-standard evaluation interfaces to
parametric standard evaluation interface, 'DebugFnW()' to capture function context on error for
debugging, and ':=' named map builder, and lambda-abstraction.
Author: John Mount [aut, cre],
Nina Zumel [aut],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between wrapr versions 1.0.0 dated 2017-10-04 and 1.0.1 dated 2017-11-17
DESCRIPTION | 8 ++--- MD5 | 34 +++++++++++---------- NAMESPACE | 2 + NEWS.md | 7 ++++ R/grepdf.R |only R/let.R | 1 R/mapvars.R | 13 ++++++-- R/qc.R |only README.md | 7 +++- build/vignette.rds |binary inst/doc/CornerCases.html | 64 ++++++++++++++++++++++++++++------------ inst/doc/DebugFnW.html | 30 +++++++++--------- inst/doc/SubstitutionModes.html | 20 ++++++------ inst/doc/dot_pipe.html | 12 +++---- inst/doc/lambda.html | 16 +++++----- inst/doc/let.html | 16 +++++----- inst/doc/named_map_builder.html | 12 +++---- man/grepdf.Rd |only man/mapsyms.Rd | 2 - man/qc.Rd |only 20 files changed, 148 insertions(+), 96 deletions(-)
Title: Automate Package and Project Setup
Description: Automate package and project setup tasks that are otherwise
performed manually. This includes setting up unit testing, test
coverage, continuous integration, Git, 'GitHub', licenses, 'Rcpp', 'RStudio'
projects, and more.
Author: Hadley Wickham [aut, cre] (0000-0003-4757-117X),
RStudio [cph]
Maintainer: Hadley Wickham <hadley@rstudio.com>
Diff between usethis versions 1.0.0 dated 2017-10-22 and 1.1.0 dated 2017-11-17
DESCRIPTION | 12 +++--- MD5 | 47 +++++++++++++++---------- NAMESPACE | 11 +++++ NEWS.md | 35 ++++++++++++++++++ R/badge.R | 46 ++++++++++++++++++++++++ R/browse.R |only R/create.R | 78 +++++++++++++++++++++++++++++++++++------- R/dev-version.R | 2 - R/edit.R | 5 -- R/github-labels.R | 12 +++++- R/github.R | 2 - R/helpers.R | 5 ++ R/license.R | 15 +++++++- R/pkgdown.R |only R/r.R |only R/revdep.R | 3 + R/test.R | 34 ++++++++++++------ R/tidyverse.R | 29 +++++++++++++++ inst/templates/license-cc0.md |only inst/templates/omni-README | 3 + inst/templates/tidy-eval.R | 17 ++------- man/browse_github.Rd |only man/create_from_github.Rd |only man/create_package.Rd | 3 + man/licenses.Rd | 9 +++- man/tidyverse.Rd | 8 ++++ man/use_lifecycle_badge.Rd |only man/use_pkgdown.Rd |only man/use_r.Rd |only 29 files changed, 301 insertions(+), 75 deletions(-)
Title: Reinforcement Learning Trees
Description: Random forest with a variety of additional features for regression, classification and survival analysis. The features include: parallel computing with OpenMP, embedded model for selecting the splitting variable (based on Zhu, Zeng & Kosorok, 2015), subject weight, variable weight, tracking subjects used in each tree, etc.
Author: Ruoqing Zhu <teazrq@gmail.com>
Maintainer: Ruoqing Zhu <teazrq@gmail.com>
Diff between RLT versions 3.1.0 dated 2017-04-09 and 3.2.0 dated 2017-11-17
DESCRIPTION | 13 +- MD5 | 22 +-- R/RLT.r | 14 +- R/print.r | 5 inst/NEWS | 15 ++ man/RLT.Rd | 10 + src/RLT.c | 37 +++--- src/RLT_classification.c | 24 +--- src/RLT_regression.c | 22 +-- src/RLT_survival.c | 267 +++++++++++++++++++++++++---------------------- src/RLT_utility.c | 8 - src/RLT_utility.h | 13 ++ 12 files changed, 240 insertions(+), 210 deletions(-)
Title: Standard Evaluation Interfaces for Common 'dplyr' Tasks
Description: The 'seplyr' (standard evaluation data.frame 'dplyr') package supplies
standard evaluation adapter methods for important common 'dplyr' methods
that currently have a non-standard programming interface. This allows
the analyst to use 'dplyr' to perform fundamental data transformation
steps such as arranging rows, grouping rows, aggregating selecting
columns without having to use learn the details of 'rlang'/'tidyeval'
non-standard evaluation and without continuing to rely on now
deprecated 'dplyr' "underscore verbs."
In addition the 'seplyr' package supplies several new "key operations
bound together" methods. These include 'group_summarize()' (which
combines grouping, arranging and calculation in an atomic unit),
'add_group_summaries()' (which joins grouped summaries into a 'data.frame'
in a well documented manner), and 'add_group_indices()' (which adds
per-group identifies to a 'data.frame' without depending on row-order).
Author: John Mount [aut, cre],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between seplyr versions 0.1.5 dated 2017-08-28 and 0.1.6 dated 2017-11-17
seplyr-0.1.5/seplyr/man/rename_mp.Rd |only seplyr-0.1.6/seplyr/DESCRIPTION | 10 +- seplyr-0.1.6/seplyr/MD5 | 59 ++++++------ seplyr-0.1.6/seplyr/NAMESPACE | 17 +++ seplyr-0.1.6/seplyr/NEWS.md | 8 + seplyr-0.1.6/seplyr/R/filter_nse.R | 9 + seplyr-0.1.6/seplyr/R/mutate_nse.R | 17 ++- seplyr-0.1.6/seplyr/R/mutate_se.R | 32 ++++-- seplyr-0.1.6/seplyr/R/package.R | 30 +++++- seplyr-0.1.6/seplyr/R/rename_se.R | 97 ++++++++++++-------- seplyr-0.1.6/seplyr/R/stringAlgebra.R | 27 ++++- seplyr-0.1.6/seplyr/R/transmute_nse.R | 10 +- seplyr-0.1.6/seplyr/README.md | 5 + seplyr-0.1.6/seplyr/build/vignette.rds |binary seplyr-0.1.6/seplyr/inst/doc/StringAlgebra.html | 34 +++---- seplyr-0.1.6/seplyr/inst/doc/mutate.R |only seplyr-0.1.6/seplyr/inst/doc/mutate.Rmd |only seplyr-0.1.6/seplyr/inst/doc/mutate.html |only seplyr-0.1.6/seplyr/inst/doc/named_map_builder.html | 30 +++--- seplyr-0.1.6/seplyr/inst/doc/rename_se.R | 9 - seplyr-0.1.6/seplyr/inst/doc/rename_se.Rmd | 11 +- seplyr-0.1.6/seplyr/inst/doc/rename_se.html | 60 ++++-------- seplyr-0.1.6/seplyr/inst/doc/seplyr.html | 40 ++++---- seplyr-0.1.6/seplyr/inst/doc/using_seplyr.html | 58 +++++------ seplyr-0.1.6/seplyr/man/filter_nse.Rd | 4 seplyr-0.1.6/seplyr/man/mutate_nse.Rd | 8 + seplyr-0.1.6/seplyr/man/mutate_se.Rd | 7 + seplyr-0.1.6/seplyr/man/reexports.Rd | 18 +++ seplyr-0.1.6/seplyr/man/rename_se.Rd | 16 ++- seplyr-0.1.6/seplyr/man/transmute_nse.Rd | 4 seplyr-0.1.6/seplyr/tests/testthat/test_stringalg.R | 12 ++ seplyr-0.1.6/seplyr/vignettes/mutate.Rmd |only seplyr-0.1.6/seplyr/vignettes/rename_se.Rmd | 11 +- 33 files changed, 396 insertions(+), 247 deletions(-)
Title: A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses
Description: A set of wrappers around 'rjags' functions to run Bayesian analyses in 'JAGS' (specifically, via 'libjags'). A single function call can control adaptive, burn-in, and sampling MCMC phases, with MCMC chains run in sequence or in parallel. Posterior distributions are automatically summarized (with the ability to exclude some monitored nodes if desired) and functions are available to generate figures based on the posteriors (e.g., predictive check plots, traceplots). Function inputs, argument syntax, and output format are nearly identical to the 'R2WinBUGS'/'R2OpenBUGS' packages to allow easy switching between MCMC samplers.
Author: Ken Kellner <contact@kenkellner.com>
Maintainer: Ken Kellner <contact@kenkellner.com>
Diff between jagsUI versions 1.4.4 dated 2016-12-03 and 1.4.8 dated 2017-11-17
DESCRIPTION | 12 +++---- MD5 | 37 ++++++++++++----------- NAMESPACE | 3 - NEWS | 12 +++++++ R/autojags.R | 32 ++++++++++++-------- R/geninits.R | 87 ++++++++++++++++++++++++++++++++++++++++++++----------- R/jags.R | 24 ++++++++------- R/jagsbasic.R | 19 ++++++------ R/print.R | 4 +- R/processinput.R | 5 +-- R/runmodel.R | 74 ++++++++++++++++++++++++++++++++-------------- R/runparallel.R | 14 +++++--- R/setfactories.R |only R/summary.R | 23 +++++++++++++- R/update.R | 21 +++++++++---- R/updatebasic.R | 20 ++++++++---- man/autojags.Rd | 12 ++++--- man/jags.Rd | 12 ++++--- man/jagsbasic.Rd | 11 +++--- man/update.Rd | 14 +++++--- 20 files changed, 295 insertions(+), 141 deletions(-)
Title: Connector to the Objective Revision Evaluation Service (ORES)
Description: A connector to ORES (<http://ores.wmflabs.org/>), an AI project to provide edit scoring for content
on Wikipedia and other Wikimedia projects. This lets a researcher identify
if edits are likely to be reverted, damaging, or made in good faith.
Author: Oliver Keyes [aut, cre], Aaron Halfaker [ctb], Yuvi Panda [ctb]
Maintainer: Oliver Keyes <ironholds@gmail.com>
Diff between ores versions 0.3.0 dated 2017-08-02 and 0.3.1 dated 2017-11-17
DESCRIPTION | 8 ++-- MD5 | 24 ++++++------ NEWS | 5 ++ R/query.R | 86 +++++++++---------------------------------- inst/doc/introduction.Rmd | 11 ++--- inst/doc/introduction.html | 9 ++-- man/check_damaging.Rd | 8 ++-- man/check_goodfaith.Rd | 6 +-- man/check_quality.Rd | 8 ++-- man/check_reverted.Rd | 40 +++----------------- man/list_models.Rd | 2 - tests/testthat/test_checks.R | 9 ---- vignettes/introduction.Rmd | 11 ++--- 13 files changed, 72 insertions(+), 155 deletions(-)
More information about YPInterimTesting at CRAN
Permanent link
Title: Class and Methods for Hyperspectral Data
Description: Input/Output, processing and visualization of spectra from field spectrometer vendors, including SVC (Spectra Vista), ASD and PSR (Spectral Evolution). Implements an S3 class 'spectra' that other packages can build on. Provides methods to access, plot, manipulate, splice sensor overlap, vector normalize and smooth spectra.
Author: Jose Eduardo Meireles [aut, cre],
Anna K. Schweiger [aut],
Jeannine Cavender-Bares [aut]
Maintainer: Jose Eduardo Meireles <meireles@umn.edu>
Diff between spectrolab versions 0.0.2 dated 2017-09-14 and 0.0.3 dated 2017-11-17
DESCRIPTION | 16 - MD5 | 28 +- NAMESPACE | 2 NEWS.md | 9 R/spectrolab.R | 6 R/transform_spectra.R | 6 README.md | 16 + build/vignette.rds |binary inst/doc/advanced_spectrolab.Rmd | 4 inst/doc/advanced_spectrolab.html | 358 ++++++++++++++++++++++++------- inst/doc/introduction_to_spectrolab.html | 255 +++++++++++++++++++--- inst/doc/match_sensors.Rmd | 2 inst/doc/match_sensors.pdf |binary vignettes/advanced_spectrolab.Rmd | 4 vignettes/match_sensors.Rmd | 2 15 files changed, 554 insertions(+), 154 deletions(-)
Title: Credit Risk Scorecard
Description: Makes the development of credit risk scorecard easily and efficiently by providing functions such as information value, variable filter, optimal woe binning, scorecard scaling and performance evaluation etc. The references including:
1. Refaat, M. (2011, ISBN: 9781447511199). Credit Risk Scorecard: Development and Implementation Using SAS.
2. Siddiqi, N. (2006, ISBN: 9780471754510). Credit risk scorecards. Developing and Implementing Intelligent Credit Scoring.
Author: Shichen Xie
Maintainer: Shichen Xie <xie@shichen.name>
Diff between scorecard versions 0.1.2 dated 2017-10-19 and 0.1.3 dated 2017-11-17
DESCRIPTION | 6 - MD5 | 40 ++++---- NAMESPACE | 2 NEWS.md | 6 + R/condition_fun.R |only R/iv.R | 26 +++-- R/perf.R | 112 ++++++++++++++++-------- R/scorecard.R | 52 ++++++----- R/splitdf.R |only R/var_filter.R | 87 +++++++++++++------ R/woebin.R | 216 ++++++++++++++++++++++++++++++++---------------- README.md | 38 ++++---- data/germancredit.RData |binary man/perf_eva.Rd |only man/perf_plot.Rd | 52 ----------- man/perf_psi.Rd | 36 +++----- man/scorecard.Rd | 4 man/scorecard_ply.Rd | 10 +- man/split_df.Rd |only man/var_filter.Rd | 16 ++- man/woebin.Rd | 11 +- man/woebin_plot.Rd | 4 man/woebin_ply.Rd | 4 23 files changed, 420 insertions(+), 302 deletions(-)
Title: Interface to 'gretlcli'
Description: An interface to 'GNU gretl': running 'gretl' scripts from, estimating econometric
models with backward passing of model results, opening 'gretl' data files (.gdt).
'gretl' can be downloaded from <http://gretl.sourceforge.net>. This package could make
life on introductory/intermediate econometrics courses much easier: full battery of the
required regression diagnostics, including White's heteroskedasticity test, restricted ols
estimation, advanced weak instrument test after iv estimation, very convenient dealing
with lagged variables in models, standard case treatment in unit root tests, vector auto-
regressions, and vector error correction models. Datasets for 8 popular econometrics
textbooks can be installed into 'gretl' from its server. All datasets can be easily imported
using this package.
Author: Oleh Komashko
Maintainer: Oleh Komashko <oleg_komashko@ukr.net>
Diff between Rgretl versions 0.1.5 dated 2017-11-14 and 0.1.6 dated 2017-11-17
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- R/rgretl.R | 2 +- README.md | 27 +++++++++++++++++++-------- man/grmod.Rd | 1 + 5 files changed, 29 insertions(+), 17 deletions(-)
Title: Download Data from the International Monetary Fund's Data API
Description: Explore and download data from the International Monetary Fund's
data API <http://data.imf.org/>.
Author: Christopher Gandrud [aut, cre]
Maintainer: Christopher Gandrud <christopher.gandrud@gmail.com>
Diff between imfr versions 0.1.4 dated 2017-03-21 and 0.1.5 dated 2017-11-17
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- NEWS | 4 ++++ R/data_functions.R | 3 +++ man/imf_ids.Rd | 2 ++ 5 files changed, 17 insertions(+), 8 deletions(-)
Title: Quantitative Analysis Made Accessible
Description: Contains a number of functions that serve
two goals. First, to make R more accessible to people migrating
from SPSS by adding a number of functions that behave roughly like
their SPSS equivalents (also see <http://rosettastats.com>). Second,
to make a number of slightly more advanced functions more user
friendly to relatively novice users. The package also conveniently
houses a number of additional functions that are intended to
increase the quality of methodology and statistics in psychology,
not by offering technical solutions, but by shifting perspectives,
for example towards reasoning based on sampling distributions as
opposed to on point estimates.
Author: Gjalt-Jorn Peters [aut, cre],
Verboon Peter [ctb],
Green James [ctb]
Maintainer: Gjalt-Jorn Peters <gjalt-jorn@userfriendlyscience.com>
Diff between userfriendlyscience versions 0.6-1 dated 2017-05-09 and 0.7.0 dated 2017-11-17
DESCRIPTION | 51 ++++++---- MD5 | 139 ++++++++++++++++++---------- NAMESPACE | 174 +++++++++++++++++++++++++++++------ NEWS | 23 ++++ R/CIBER.R | 28 +++-- R/checkDataIntegrity.R |only R/cohensdCI.R | 2 R/confIntProp.R |only R/confIntR.R | 12 +- R/confIntV.R | 22 +--- R/detStructCIBER.R | 1 R/detStructComputeProducts.R | 35 +++++-- R/detStructComputeScales.R | 2 R/determinantStructure.R | 3 R/dlvPlot.R | 182 +++++++++++++++++++++++++++++-------- R/duoComparisonDiamondPlot.R | 2 R/extractVarName.R | 7 + R/facComAnalysis.R |only R/factorLoadingDiamondCIplot.R | 35 +++++-- R/fanova.R |only R/findShortestInterval.R |only R/functions_from_other_packages.R |only R/genlog.R |only R/genlogFunction.R |only R/ggConfidenceCurve.R | 139 ++++++++++++++++++++++++---- R/ggEasyBar.R |only R/ggEasyRidge.R |only R/ggPie.R | 10 +- R/ggProportionPlot.R |only R/knitFig.R |only R/logRegr.R |only R/meansDiamondPlot.R | 9 + R/multiResponse.R |only R/multiVarFreq.R |only R/nnc.R | 93 +++++++++++++++++- R/oneway.R | 4 R/piecewiseRegr.R |only R/posthocTGH.R | 30 +++--- R/powerHist.R | 14 +- R/processLimeSurveyDropouts.R | 11 +- R/pwr.cohensdCI.R | 10 +- R/regr.R | 148 ++++++++++++++++++++++++++++-- R/regrInfluential.R | 2 R/reliability.R |only R/scaleStructure.R | 4 R/scatterPlot.R | 11 +- R/setCaptionNumbering.R | 12 +- R/setFigCapNumbering.R | 58 +++++------ R/sharedSubString.R |only R/therapyMonitor.R | 6 - R/validMeans.R |only R/validSums.R |only README.md | 17 ++- data/Singh.rda |only inst/CITATION | 2 man/CIBER.Rd | 5 + man/Singh.Rd |only man/biAxisDiamondPlot.Rd | 2 man/checkDataIntegrity.Rd |only man/cohensdDist.Rd | 3 man/confIntProp.Rd |only man/confIntV.Rd | 6 - man/dlvPlot.Rd | 44 +++++++- man/facComAnalysis.Rd |only man/factorLoadingDiamondCIplot.Rd | 39 +++++-- man/fanova.Rd |only man/findShortestInterval.Rd |only man/genlog.Rd |only man/genlogFunction.Rd |only man/ggConfidenceCurve.Rd | 46 +++++++-- man/ggEasyPlots.Rd |only man/ggPie.Rd | 6 + man/ggProportionPlot.Rd |only man/knitFig.Rd |only man/logRegr.Rd |only man/multiResponse.Rd |only man/multiVarFreq.Rd |only man/nnc.Rd | 25 ++++- man/oneway.Rd | 2 man/piecewiseRegr.Rd |only man/posthocTGH.Rd | 6 - man/printMethods.Rd | 16 ++- man/regr.Rd | 18 +++ man/reliability.Rd |only man/scatterPlot.Rd | 5 + man/setCaptionNumbering.Rd | 4 man/setFigCapNumbering.Rd | 10 +- man/sharedSubString.Rd |only man/userfriendlyscience-package.Rd | 42 ++++++-- man/validComputations.Rd |only 90 files changed, 1231 insertions(+), 346 deletions(-)
More information about userfriendlyscience at CRAN
Permanent link
Title: R Ultimate Multilabel Dataset Repository
Description: Large collection of multilabel datasets along with the functions
needed to export them to several formats, to make partitions, and to obtain
bibliographic information.
Author: David Charte [cre],
Francisco Charte [aut]
Maintainer: David Charte <fdavidcl@outlook.com>
Diff between mldr.datasets versions 0.3.15 dated 2016-01-16 and 0.4.0 dated 2017-11-17
mldr.datasets-0.3.15/mldr.datasets/R/20ng.R |only mldr.datasets-0.3.15/mldr.datasets/R/bibtex.R |only mldr.datasets-0.3.15/mldr.datasets/R/birds.R |only mldr.datasets-0.3.15/mldr.datasets/R/bookmarks.R |only mldr.datasets-0.3.15/mldr.datasets/R/cal500.R |only mldr.datasets-0.3.15/mldr.datasets/R/corel16k001.R |only mldr.datasets-0.3.15/mldr.datasets/R/corel16k002.R |only mldr.datasets-0.3.15/mldr.datasets/R/corel16k003.R |only mldr.datasets-0.3.15/mldr.datasets/R/corel16k004.R |only mldr.datasets-0.3.15/mldr.datasets/R/corel16k005.R |only mldr.datasets-0.3.15/mldr.datasets/R/corel16k006.R |only mldr.datasets-0.3.15/mldr.datasets/R/corel16k007.R |only mldr.datasets-0.3.15/mldr.datasets/R/corel16k008.R |only mldr.datasets-0.3.15/mldr.datasets/R/corel16k009.R |only mldr.datasets-0.3.15/mldr.datasets/R/corel16k010.R |only mldr.datasets-0.3.15/mldr.datasets/R/corel5k.R |only mldr.datasets-0.3.15/mldr.datasets/R/delicious.R |only mldr.datasets-0.3.15/mldr.datasets/R/emotions.R |only mldr.datasets-0.3.15/mldr.datasets/R/enron.R |only mldr.datasets-0.3.15/mldr.datasets/R/eurlexdc_test.R |only mldr.datasets-0.3.15/mldr.datasets/R/eurlexdc_tra.R |only mldr.datasets-0.3.15/mldr.datasets/R/eurlexev_test.R |only mldr.datasets-0.3.15/mldr.datasets/R/eurlexev_tra.R |only mldr.datasets-0.3.15/mldr.datasets/R/eurlexsm_test.R |only mldr.datasets-0.3.15/mldr.datasets/R/eurlexsm_tra.R |only mldr.datasets-0.3.15/mldr.datasets/R/flags.R |only mldr.datasets-0.3.15/mldr.datasets/R/genbase.R |only mldr.datasets-0.3.15/mldr.datasets/R/imdb.R |only mldr.datasets-0.3.15/mldr.datasets/R/kfolds.R |only mldr.datasets-0.3.15/mldr.datasets/R/langlog.R |only mldr.datasets-0.3.15/mldr.datasets/R/mediamill.R |only mldr.datasets-0.3.15/mldr.datasets/R/medical.R |only mldr.datasets-0.3.15/mldr.datasets/R/nuswide_BoW.R |only mldr.datasets-0.3.15/mldr.datasets/R/nuswide_VLAD.R |only mldr.datasets-0.3.15/mldr.datasets/R/ohsumed.R |only mldr.datasets-0.3.15/mldr.datasets/R/rcv1sub1.R |only mldr.datasets-0.3.15/mldr.datasets/R/rcv1sub2.R |only mldr.datasets-0.3.15/mldr.datasets/R/rcv1sub3.R |only mldr.datasets-0.3.15/mldr.datasets/R/rcv1sub4.R |only mldr.datasets-0.3.15/mldr.datasets/R/rcv1sub5.R |only mldr.datasets-0.3.15/mldr.datasets/R/reutersk500.R |only mldr.datasets-0.3.15/mldr.datasets/R/scene.R |only mldr.datasets-0.3.15/mldr.datasets/R/slashdot.R |only mldr.datasets-0.3.15/mldr.datasets/R/stackex_chemistry.R |only mldr.datasets-0.3.15/mldr.datasets/R/stackex_chess.R |only mldr.datasets-0.3.15/mldr.datasets/R/stackex_coffee.R |only mldr.datasets-0.3.15/mldr.datasets/R/stackex_cooking.R |only mldr.datasets-0.3.15/mldr.datasets/R/stackex_cs.R |only mldr.datasets-0.3.15/mldr.datasets/R/stackex_philosophy.R |only mldr.datasets-0.3.15/mldr.datasets/R/sysdata.rda |only mldr.datasets-0.3.15/mldr.datasets/R/tmc2007.R |only mldr.datasets-0.3.15/mldr.datasets/R/tmc2007_500.R |only mldr.datasets-0.3.15/mldr.datasets/R/yahoo_arts.R |only mldr.datasets-0.3.15/mldr.datasets/R/yahoo_business.R |only mldr.datasets-0.3.15/mldr.datasets/R/yahoo_computers.R |only mldr.datasets-0.3.15/mldr.datasets/R/yahoo_education.R |only mldr.datasets-0.3.15/mldr.datasets/R/yahoo_entertainment.R |only mldr.datasets-0.3.15/mldr.datasets/R/yahoo_health.R |only mldr.datasets-0.3.15/mldr.datasets/R/yahoo_recreation.R |only mldr.datasets-0.3.15/mldr.datasets/R/yahoo_reference.R |only mldr.datasets-0.3.15/mldr.datasets/R/yahoo_science.R |only mldr.datasets-0.3.15/mldr.datasets/R/yahoo_social.R |only mldr.datasets-0.3.15/mldr.datasets/R/yahoo_society.R |only mldr.datasets-0.3.15/mldr.datasets/R/yeast.R |only mldr.datasets-0.3.15/mldr.datasets/inst |only mldr.datasets-0.4.0/mldr.datasets/DESCRIPTION | 10 mldr.datasets-0.4.0/mldr.datasets/MD5 | 228 +++----- mldr.datasets-0.4.0/mldr.datasets/NAMESPACE | 11 mldr.datasets-0.4.0/mldr.datasets/R/dataset_measures.R |only mldr.datasets-0.4.0/mldr.datasets/R/datasets.R |only mldr.datasets-0.4.0/mldr.datasets/R/export.R | 255 ++++++---- mldr.datasets-0.4.0/mldr.datasets/R/partitions.R |only mldr.datasets-0.4.0/mldr.datasets/R/partitions_iter.R |only mldr.datasets-0.4.0/mldr.datasets/R/partitions_rand.R |only mldr.datasets-0.4.0/mldr.datasets/R/partitions_stra.R |only mldr.datasets-0.4.0/mldr.datasets/R/utils.R | 88 +++ mldr.datasets-0.4.0/mldr.datasets/README.md | 14 mldr.datasets-0.4.0/mldr.datasets/man/available.mldrs.Rd |only mldr.datasets-0.4.0/mldr.datasets/man/bibtex.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/birds.Rd | 3 mldr.datasets-0.4.0/mldr.datasets/man/bookmarks.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/cal500.Rd | 3 mldr.datasets-0.4.0/mldr.datasets/man/check_n_load.mldr.Rd | 3 mldr.datasets-0.4.0/mldr.datasets/man/corel16k001.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/corel16k002.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/corel16k003.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/corel16k004.Rd | 10 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mldr.datasets-0.4.0/mldr.datasets/man/flags.Rd | 3 mldr.datasets-0.4.0/mldr.datasets/man/genbase.Rd | 3 mldr.datasets-0.4.0/mldr.datasets/man/get.mldr.Rd |only mldr.datasets-0.4.0/mldr.datasets/man/imdb.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/iterative.stratification.holdout.Rd |only mldr.datasets-0.4.0/mldr.datasets/man/iterative.stratification.kfolds.Rd |only mldr.datasets-0.4.0/mldr.datasets/man/iterative.stratification.partitions.Rd |only mldr.datasets-0.4.0/mldr.datasets/man/langlog.Rd | 3 mldr.datasets-0.4.0/mldr.datasets/man/mediamill.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/medical.Rd | 3 mldr.datasets-0.4.0/mldr.datasets/man/mldrs.Rd | 3 mldr.datasets-0.4.0/mldr.datasets/man/ng20.Rd | 3 mldr.datasets-0.4.0/mldr.datasets/man/nuswide_BoW.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/nuswide_VLAD.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/ohsumed.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/random.holdout.Rd |only 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mldr.datasets-0.4.0/mldr.datasets/man/stratified.holdout.Rd |only mldr.datasets-0.4.0/mldr.datasets/man/stratified.kfolds.Rd | 13 mldr.datasets-0.4.0/mldr.datasets/man/stratified.partitions.Rd |only mldr.datasets-0.4.0/mldr.datasets/man/tmc2007.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/tmc2007_500.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/toBibtex.mldr.Rd | 1 mldr.datasets-0.4.0/mldr.datasets/man/write.mldr.Rd | 6 mldr.datasets-0.4.0/mldr.datasets/man/yahoo_arts.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/yahoo_business.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/yahoo_computers.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/yahoo_education.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/yahoo_entertainment.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/yahoo_health.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/yahoo_recreation.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/yahoo_reference.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/yahoo_science.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/yahoo_social.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/yahoo_society.Rd | 10 mldr.datasets-0.4.0/mldr.datasets/man/yeast.Rd | 10 156 files changed, 698 insertions(+), 491 deletions(-)
Title: Projection Based Clustering
Description: A clustering approach for every projection method based on the generalized U*-matrix visualization of a topographic map is made available here [Thrun/Ultsch,2017] <DOI:10.13140/RG.2.2.13124.53124>. The number of clusters and the cluster structure can be estimated by counting the valleys in a topographic map. If the number of clusters and the clustering method are chosen correctly, then the clusters will be well separated by mountains in the visualization. Most projection methods are wrappers for already available methods in R. However, the neighbor retrieval visualizer (NeRV) is based on C++ source code of the 'dredviz' software package and the Curvilinear Component Analysis (CCA) is translated from 'MATLAB' ('SOM Toolbox' 2.0) to R.
Author: Michael Thrun [aut, cre],
Florian Lerch [aut],
Felix Pape [aut],
Kristian Nybo [cph],
Jarkko Venna [cph]
Maintainer: Michael Thrun <m.thrun@gmx.net>
Diff between ProjectionBasedClustering versions 1.0.4 dated 2017-08-21 and 1.0.5 dated 2017-11-17
DESCRIPTION | 8 ++++---- MD5 | 11 ++++++----- R/DefaultColorSequence.R |only src/inputprobentropy.cpp | 4 ++-- src/klmeasure.cpp | 4 ++-- src/klrank.cpp | 12 ++++++------ src/nervcostfunction.cpp | 8 ++++---- 7 files changed, 24 insertions(+), 23 deletions(-)
More information about ProjectionBasedClustering at CRAN
Permanent link
Title: Multivariate Partial Mantel Correlogram
Description: Functions to compute and plot multivariate (partial) Mantel correlograms.
Author: Marcelino de la Cruz
Maintainer: Marcelino de la Cruz <marcelino.delacruz@urjc.es>
Diff between mpmcorrelogram versions 0.1-3 dated 2013-03-13 and 0.1-4 dated 2017-11-17
DESCRIPTION | 13 ++++++------- MD5 | 6 +++--- NAMESPACE | 2 +- R/mpmcorrelogram.R | 2 +- 4 files changed, 11 insertions(+), 12 deletions(-)
More information about mpmcorrelogram at CRAN
Permanent link
Title: Rmetrics - Financial Time Series Objects
Description: Provides a class and various tools for financial time series.
This includes basic functions such as scaling and sorting, subsetting,
mathematical operations and statistical functions.
Author: Diethelm Wuertz [aut],
Tobias Setz [cre],
Yohan Chalabi [ctb]
Maintainer: Tobias Setz <tobias.setz@live.com>
Diff between timeSeries versions 3022.101.2 dated 2015-12-14 and 3042.102 dated 2017-11-17
DESCRIPTION | 22 - MD5 | 20 - NAMESPACE | 1 R/base-sort.R | 111 +++---- R/methods-is.R | 177 ++++++----- R/methods-mathOps.R | 411 ++++++++++++--------------- R/methods-plot.R | 462 +++++++++++++++--------------- R/methods-plot2.R | 666 +++++++++++++++++++++++--------------------- build/vignette.rds |binary inst/doc/timeSeriesPlot.pdf |binary man/methods-mathOps.Rd | 303 +++++++++----------- 11 files changed, 1093 insertions(+), 1080 deletions(-)
Title: Character String Processing Facilities
Description: Allows for fast, correct, consistent, portable,
as well as convenient character string/text processing in every locale
and any native encoding. Owing to the use of the ICU library,
the package provides R users with platform-independent functions
known to Java, Perl, Python, PHP, and Ruby programmers. Available
features include: pattern searching (e.g., with ICU Java-like regular
expressions or the Unicode Collation Algorithm), random string generation,
case mapping, string transliteration, concatenation,
Unicode normalization, date-time formatting and parsing, etc.
Author: Marek Gagolewski [aut, cre], Bartek Tartanus [ctb],
and other contributors (stringi source code);
IBM and other contributors (ICU4C 55.1 source code);
Unicode, Inc. (Unicode Character Database)
Maintainer: Marek Gagolewski <gagolews@rexamine.com>
Diff between stringi versions 1.1.5 dated 2017-04-07 and 1.1.6 dated 2017-11-17
DESCRIPTION | 8 - MD5 | 76 ++++++------ NEWS | 17 ++ R/compare.R | 2 R/encoding.R | 7 - R/opts.R | 16 +- R/search.R | 12 ++ R/search_extract_4.R | 5 R/search_locate_bound.R | 3 R/search_match_4.R | 2 R/search_replace_4.R | 7 + R/search_split_bound.R | 2 R/sub.R | 4 R/trans_transliterate.R | 3 man/stri_compare.Rd | 2 man/stri_extract.Rd | 5 man/stri_locate_boundaries.Rd | 3 man/stri_match.Rd | 2 man/stri_opts_brkiter.Rd | 10 + man/stri_replace.Rd | 7 + man/stri_split_boundaries.Rd | 2 man/stri_sub.Rd | 4 man/stri_trans_general.Rd | 3 man/stringi-encoding.Rd | 7 - man/stringi-search-charclass.Rd | 4 man/stringi-search-regex.Rd | 8 + src/stri_brkiter.cpp | 53 +++++--- src/stri_brkiter.h | 38 ++++-- src/stri_collator.cpp | 5 src/stri_container_bytesearch.cpp | 6 - src/stri_container_regex.cpp | 6 - src/stri_container_utf16.cpp | 8 + src/stri_container_utf8.cpp | 8 + src/stri_escape.cpp | 7 - src/stri_prepare_arg.cpp | 197 ++++++++++++++++++++++++++++----- src/stri_search_boundaries_extract.cpp | 10 - src/stri_stringi.h | 1 src/stri_sub.cpp | 8 - src/stri_ucnv.h | 8 + 39 files changed, 438 insertions(+), 138 deletions(-)
Title: Parse and Test Robots Exclusion Protocol Files and Rules
Description: The 'Robots Exclusion Protocol' <http://www.robotstxt.org/orig.html> documents
a set of standards for allowing or excluding robot/spider crawling of different areas of
site content. Tools are provided which wrap The 'rep-cpp' <https://github.com/seomoz/rep-cpp>
C++ library for processing these 'robots.txt' files.
Author: Bob Rudis (bob@rud.is) [aut, cre], SEOmoz, Inc [aut]
Maintainer: Bob Rudis <bob@rud.is>
Diff between spiderbar versions 0.2.0 dated 2017-09-25 and 0.2.1 dated 2017-11-17
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- tests/testthat/test-spiderbar.R | 2 +- 3 files changed, 7 insertions(+), 7 deletions(-)
Title: Semantically Rich I/O for the 'NeXML' Format
Description: Provides access to phyloinformatic data in 'NeXML' format. The
package should add new functionality to R such as the possibility to
manipulate 'NeXML' objects in more various and refined way and compatibility
with 'ape' objects.
Author: Carl Boettiger [cre, aut] (0000-0002-1642-628X),
Scott Chamberlain [aut] (0000-0003-1444-9135),
Hilmar Lapp [aut] (0000-0001-9107-0714),
Kseniia Shumelchyk [aut],
Rutger Vos [aut] (0000-0001-9254-7318)
Maintainer: Carl Boettiger <cboettig@gmail.com>
Diff between RNeXML versions 2.0.7 dated 2016-06-28 and 2.0.8 dated 2017-11-17
DESCRIPTION | 32 MD5 | 106 +- NEWS | 5 R/character_classes.R | 30 README.md | 3 build/vignette.rds |binary inst/doc/S4.html | 95 +- inst/doc/metadata.R | 38 - inst/doc/metadata.Rmd | 88 +- inst/doc/metadata.html | 1432 +++++++++++++++++++++++++++++++++++--- inst/doc/simmap.html | 100 +- inst/doc/sparql.R | 3 inst/doc/sparql.Rmd | 3 inst/doc/sparql.html | 104 +- man/add_basic_meta.Rd | 1 man/add_characters.Rd | 1 man/add_meta.Rd | 1 man/add_namespaces.Rd | 1 man/add_trees.Rd | 1 man/c-ListOfmeta-method.Rd | 1 man/c-meta-method.Rd | 1 man/c-nexml-method.Rd | 1 man/flatten_multiphylo.Rd | 1 man/get_characters.Rd | 1 man/get_characters_list.Rd | 1 man/get_citation.Rd | 1 man/get_flat_trees.Rd | 1 man/get_level.Rd | 1 man/get_license.Rd | 1 man/get_metadata.Rd | 1 man/get_namespaces.Rd | 1 man/get_rdf.Rd | 1 man/get_taxa.Rd | 3 man/get_taxa_list.Rd | 3 man/get_taxa_meta.Rd | 1 man/get_taxa_meta_list.Rd | 1 man/get_trees.Rd | 1 man/get_trees_list.Rd | 1 man/meta.Rd | 1 man/nexml_add.Rd | 1 man/nexml_figshare.Rd | 1 man/nexml_get.Rd | 3 man/nexml_publish.Rd | 1 man/nexml_read.Rd | 5 man/nexml_to_simmap.Rd | 1 man/nexml_validate.Rd | 1 man/nexml_write.Rd | 1 man/reset_id_counter.Rd | 1 man/simmap_ex.Rd | 1 man/simmap_to_nexml.Rd | 1 man/taxize_nexml.Rd | 1 man/toPhylo.Rd | 1 tests/testthat/test_concatenate.R | 16 tests/testthat/test_zzz_cleanup.R |only tools |only 55 files changed, 1746 insertions(+), 357 deletions(-)
Title: A Collection of Efficient and Extremely Fast R Functions
Description: A collection of fast (utility) functions for data analysis. Column- and row- wise means, medians, variances, minimums, maximums, many t, F and G-square tests, many regressions (normal, logistic, Poisson), are some of the many fast functions.
Author: Manos Papadakis, Michail Tsagris, Marios Dimitriadis, Stefanos Fafalios, Ioannis Tsamardinos, Matteo Fasiolo, Giorgos Borboudakis, John Burkardt, Changliang Zou and Kleanthi Lakiotaki
Maintainer: Manos Papadakis <papadakm95@gmail.com>
Diff between Rfast versions 1.8.5 dated 2017-11-13 and 1.8.6 dated 2017-11-17
Rfast-1.8.5/Rfast/src/kron.cpp |only Rfast-1.8.5/Rfast/src/regression.cpp |only Rfast-1.8.6/Rfast/DESCRIPTION | 10 ++-- Rfast-1.8.6/Rfast/MD5 | 68 +++++++++++++--------------- Rfast-1.8.6/Rfast/NEWS.md | 32 +++++++++---- Rfast-1.8.6/Rfast/R/Pmax.R | 2 Rfast-1.8.6/Rfast/R/Pmin.R | 2 Rfast-1.8.6/Rfast/R/Round.R | 4 - Rfast-1.8.6/Rfast/R/colnth.R | 4 - Rfast-1.8.6/Rfast/R/ompr.R | 6 +- Rfast-1.8.6/Rfast/R/regression.R | 51 +++++++++++++++++++-- Rfast-1.8.6/Rfast/R/weib.reg.R | 20 -------- Rfast-1.8.6/Rfast/man/Rfast-package.Rd | 4 - Rfast-1.8.6/Rfast/man/Round.Rd | 11 +--- Rfast-1.8.6/Rfast/man/regression.Rd | 37 +++++++-------- Rfast-1.8.6/Rfast/man/sort_unique.Rd | 5 -- Rfast-1.8.6/Rfast/man/weib.reg.Rd | 10 +--- Rfast-1.8.6/Rfast/src/Round.cpp | 28 +++++++++-- Rfast-1.8.6/Rfast/src/Sort.cpp | 11 ++-- Rfast-1.8.6/Rfast/src/cholesky.cpp | 2 Rfast-1.8.6/Rfast/src/col_row_meds.cpp | 2 Rfast-1.8.6/Rfast/src/count_value.cpp | 2 Rfast-1.8.6/Rfast/src/frame_to_matrix.cpp | 14 +++-- Rfast-1.8.6/Rfast/src/group_sum.cpp | 8 +-- Rfast-1.8.6/Rfast/src/init.c | 10 +--- Rfast-1.8.6/Rfast/src/mn.cpp | 46 ++++++------------ Rfast-1.8.6/Rfast/src/mn.h | 11 +--- Rfast-1.8.6/Rfast/src/partial_sort.cpp | 8 +-- Rfast-1.8.6/Rfast/src/reg_lib.cpp | 16 +----- Rfast-1.8.6/Rfast/src/sort_mat.cpp | 12 +++- Rfast-1.8.6/Rfast/src/sort_mat_p.cpp | 6 +- Rfast-1.8.6/Rfast/src/sort_mat_stable.cpp | 12 +++- Rfast-1.8.6/Rfast/src/sort_mat_stable_p.cpp | 6 +- Rfast-1.8.6/Rfast/src/sort_unique.cpp | 5 -- Rfast-1.8.6/Rfast/src/stable_sort.cpp | 10 ---- Rfast-1.8.6/Rfast/src/which_isFactor.cpp | 4 - 36 files changed, 253 insertions(+), 226 deletions(-)
Title: Interface with Google Cloud Storage API
Description: Interact with Google Cloud Storage <https://cloud.google.com/storage/>
API in R. Part of the 'cloudyr' <https://cloudyr.github.io/> project.
Author: Mark Edmondson [aut, cre] (0000-0002-8434-3881)
Maintainer: Mark Edmondson <r@sunholo.com>
Diff between googleCloudStorageR versions 0.3.0 dated 2017-05-27 and 0.4.0 dated 2017-11-17
googleCloudStorageR-0.3.0/googleCloudStorageR/man/cat0.Rd |only googleCloudStorageR-0.3.0/googleCloudStorageR/man/error.message.Rd |only googleCloudStorageR-0.3.0/googleCloudStorageR/man/format_object_size.Rd |only googleCloudStorageR-0.3.0/googleCloudStorageR/man/idempotency.Rd |only googleCloudStorageR-0.3.0/googleCloudStorageR/man/is.NullOb.Rd |only googleCloudStorageR-0.3.0/googleCloudStorageR/man/is.error.Rd |only googleCloudStorageR-0.3.0/googleCloudStorageR/man/js_to_posix.Rd |only googleCloudStorageR-0.3.0/googleCloudStorageR/man/myMessage.Rd |only googleCloudStorageR-0.3.0/googleCloudStorageR/man/postwalk.Rd |only googleCloudStorageR-0.3.0/googleCloudStorageR/man/replace.kv.Rd |only googleCloudStorageR-0.3.0/googleCloudStorageR/man/rmNullObs.Rd |only googleCloudStorageR-0.3.0/googleCloudStorageR/man/substitute.list.Rd |only googleCloudStorageR-0.3.0/googleCloudStorageR/man/timestamp_to_r.Rd |only googleCloudStorageR-0.3.0/googleCloudStorageR/tests |only googleCloudStorageR-0.4.0/googleCloudStorageR/DESCRIPTION | 22 - googleCloudStorageR-0.4.0/googleCloudStorageR/LICENSE | 2 googleCloudStorageR-0.4.0/googleCloudStorageR/MD5 | 69 ++--- googleCloudStorageR-0.4.0/googleCloudStorageR/NAMESPACE | 33 ++ googleCloudStorageR-0.4.0/googleCloudStorageR/NEWS.md | 24 + googleCloudStorageR-0.4.0/googleCloudStorageR/R/acl.R | 92 +++---- googleCloudStorageR-0.4.0/googleCloudStorageR/R/auth.R | 14 - googleCloudStorageR-0.4.0/googleCloudStorageR/R/buckets.R | 116 ++++----- googleCloudStorageR-0.4.0/googleCloudStorageR/R/download.R | 39 +-- googleCloudStorageR-0.4.0/googleCloudStorageR/R/googleCloudStorageR.R |only googleCloudStorageR-0.4.0/googleCloudStorageR/R/objects.R | 75 +++-- googleCloudStorageR-0.4.0/googleCloudStorageR/R/options.R | 5 googleCloudStorageR-0.4.0/googleCloudStorageR/R/profile.R |only googleCloudStorageR-0.4.0/googleCloudStorageR/R/pubsub.R |only googleCloudStorageR-0.4.0/googleCloudStorageR/R/rsession.R | 128 +++++++++- googleCloudStorageR-0.4.0/googleCloudStorageR/R/upload.R | 78 +++--- googleCloudStorageR-0.4.0/googleCloudStorageR/R/utilities.R | 30 -- googleCloudStorageR-0.4.0/googleCloudStorageR/inst/doc/googleCloudStorageR.html | 100 +++---- googleCloudStorageR-0.4.0/googleCloudStorageR/man/Object.Rd | 1 googleCloudStorageR-0.4.0/googleCloudStorageR/man/gcs_create_bucket.Rd | 3 googleCloudStorageR-0.4.0/googleCloudStorageR/man/gcs_create_pubsub.Rd |only googleCloudStorageR-0.4.0/googleCloudStorageR/man/gcs_delete_pubsub.Rd |only googleCloudStorageR-0.4.0/googleCloudStorageR/man/gcs_first.Rd |only googleCloudStorageR-0.4.0/googleCloudStorageR/man/gcs_get_service_email.Rd |only googleCloudStorageR-0.4.0/googleCloudStorageR/man/gcs_list_pubsub.Rd |only googleCloudStorageR-0.4.0/googleCloudStorageR/man/gcs_load.Rd | 9 googleCloudStorageR-0.4.0/googleCloudStorageR/man/gcs_save.Rd | 5 googleCloudStorageR-0.4.0/googleCloudStorageR/man/gcs_save_all.Rd |only googleCloudStorageR-0.4.0/googleCloudStorageR/man/gcs_save_image.Rd | 9 googleCloudStorageR-0.4.0/googleCloudStorageR/man/gcs_source.Rd | 3 googleCloudStorageR-0.4.0/googleCloudStorageR/man/googleCloudStorageR.Rd |only 45 files changed, 519 insertions(+), 338 deletions(-)
More information about googleCloudStorageR at CRAN
Permanent link
Title: Drawing Survival Curves using 'ggplot2'
Description: Contains the function 'ggsurvplot()' for drawing easily beautiful
and 'ready-to-publish' survival curves with the 'number at risk' table
and 'censoring count plot'. Other functions are also available to plot
adjusted curves for `Cox` model and to visually examine 'Cox' model assumptions.
Author: Alboukadel Kassambara [aut, cre],
Marcin Kosinski [aut],
Przemyslaw Biecek [ctb],
Scheipl Fabian [ctb]
Maintainer: Alboukadel Kassambara <alboukadel.kassambara@gmail.com>
Diff between survminer versions 0.4.0 dated 2017-06-07 and 0.4.1 dated 2017-11-17
survminer-0.4.0/survminer/R/ggcoxadjustedcurves.R |only survminer-0.4.0/survminer/man/ggcoxadjustedcurves.Rd |only survminer-0.4.1/survminer/DESCRIPTION | 23 - survminer-0.4.1/survminer/MD5 | 46 +- survminer-0.4.1/survminer/NAMESPACE | 6 survminer-0.4.1/survminer/NEWS.md | 28 + survminer-0.4.1/survminer/R/ggadjustedcurves.R |only survminer-0.4.1/survminer/R/ggcompetingrisks.R | 12 survminer-0.4.1/survminer/R/ggflexsurvplot.R |only survminer-0.4.1/survminer/R/ggforest.R | 160 ++++++---- survminer-0.4.1/survminer/R/ggsurvplot.R | 7 survminer-0.4.1/survminer/R/ggsurvplot_core.R | 9 survminer-0.4.1/survminer/R/ggsurvtable.R | 14 survminer-0.4.1/survminer/R/utilities.R | 2 survminer-0.4.1/survminer/README.md | 8 survminer-0.4.1/survminer/inst/doc/Informative_Survival_Plots.R | 36 +- survminer-0.4.1/survminer/inst/doc/Informative_Survival_Plots.Rmd | 4 survminer-0.4.1/survminer/inst/doc/Informative_Survival_Plots.html | 22 - survminer-0.4.1/survminer/inst/doc/Playing_with_fonts_and_texts.html | 30 + survminer-0.4.1/survminer/inst/doc/Specifiying_weights_in_log-rank_comparisons.html | 32 +- survminer-0.4.1/survminer/man/ggadjustedcurves.Rd |only survminer-0.4.1/survminer/man/ggflexsurvplot.Rd |only survminer-0.4.1/survminer/man/ggforest.Rd | 16 - survminer-0.4.1/survminer/man/ggsurvplot.Rd | 4 survminer-0.4.1/survminer/man/ggsurvtable.Rd | 7 survminer-0.4.1/survminer/tools/README-ggplot2-basic-survival-plot-1.png |binary survminer-0.4.1/survminer/vignettes/Informative_Survival_Plots.Rmd | 4 27 files changed, 293 insertions(+), 177 deletions(-)
Title: Rmetrics - Markets and Basic Statistics
Description: Provides a collection of functions to
explore and to investigate basic properties of financial returns
and related quantities.
The covered fields include techniques of explorative data analysis
and the investigation of distributional properties, including
parameter estimation and hypothesis testing. Even more there are
several utility functions for data handling and management.
Author: Diethelm Wuertz [aut],
Tobias Setz [cre],
Yohan Chalabi [ctb]
Martin Maechler [ctb]
Maintainer: Tobias Setz <tobias.setz@live.com>
Diff between fBasics versions 3011.87 dated 2014-10-29 and 3042.89 dated 2017-11-17
DESCRIPTION | 33 ++-- MD5 | 32 ++-- NAMESPACE | 62 ++++++- R/dist-gldFit.R | 5 R/gui-sliderMenu.R | 8 - R/stats-interpAkima.R | 89 +++++------ R/stats-interpKrige.R | 12 - R/stats-interpLinear.R | 83 +++++----- R/test-normalityTest.R | 17 +- R/utils-listDescription.R | 19 +- R/utils-listFunctions.R | 17 +- R/utils-listIndex.R | 21 +- R/zzz.R | 96 ++++++------ inst/unitTests/runit.NormalityTests.R | 1 inst/unitTests/runit.listDescription.R | 18 +- man/stats-interpAkima.Rd | 264 +++++++++++++++------------------ man/stats-interpKrige.Rd | 156 ++++++++----------- 17 files changed, 454 insertions(+), 479 deletions(-)
Title: Tests on Properties of Space-Time Covariance Functions
Description: Tests on properties of space-time covariance functions.
Tests on symmetry, separability and for assessing
different forms of non-separability are available. Moreover tests on
some classes of covariance functions, such that the classes of
product-sum models, Gneiting models and integrated product models have
been provided.
Author: Sandra De Iaco [aut, cre],
Claudia Cappello [aut],
Donato Posa [aut],
Sabrina Maggio [ctb]
Maintainer: Sandra De Iaco <sandra.deiaco@unisalento.it>
Diff between covatest versions 0.2.1 dated 2017-04-27 and 0.3.0 dated 2017-11-17
DESCRIPTION | 6 MD5 | 26 NAMESPACE | 1 R/blocks.R | 663 +++---- R/couples.R | 1741 +++++++++--------- R/covablocks.R | 1261 ++++++------- R/covaprop.R | 627 +++--- R/covastat.R | 4418 ++++++++++++++++++++++++------------------------ R/sepindex.R | 257 +- man/blocks-class.Rd | 7 man/couples-class.Rd | 25 man/covablocks-class.Rd | 7 man/covaprop.Rd | 11 man/covastat-class.Rd | 12 14 files changed, 4603 insertions(+), 4459 deletions(-)
Title: Ensemble Model Output Statistics
Description: Ensemble Model Output Statistics to create probabilistic
forecasts from ensemble forecasts and weather observations.
Author: RA Yuen, Sandor Baran, Chris Fraley, Tilmann Gneiting, Sebastian Lerch, Michael Scheuerer, Thordis Thorarinsdottir
Maintainer: Sandor Baran <baran.sandor@inf.unideb.hu>
Diff between ensembleMOS versions 0.8 dated 2017-08-08 and 0.8.1 dated 2017-11-17
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- R/fitMOScsg0.R | 2 +- 3 files changed, 7 insertions(+), 7 deletions(-)
Title: Blind Source Separation and Supervised Dimension Reduction for
Time Series
Description: Different estimates are provided to solve the blind source separation problem for multivariate time series with stochastic volatility (Matilainen, Nordhausen and Oja (2015) <doi:10.1016/j.spl.2015.04.033>); Matilainen, Miettinen, Nordhausen, Oja and Taskinen (2017) <doi:10.17713/ajs.v46i3-4.671>) and supervised dimension reduction problem for multivariate time series (Matilainen, Croux, Nordhausen and Oja (2017) <doi:10.1016/j.ecosta.2017.04.002>).
Author: Markus Matilainen, Christophe Croux, Jari Miettinen, Klaus Nordhausen, Hannu Oja, Sara Taskinen
Maintainer: Markus Matilainen <markus.matilainen@outlook.com>
Diff between tsBSS versions 0.3.1 dated 2017-08-18 and 0.4 dated 2017-11-17
tsBSS-0.3.1/tsBSS/build |only tsBSS-0.4/tsBSS/DESCRIPTION | 19 ++- tsBSS-0.4/tsBSS/MD5 | 52 ++++++---- tsBSS-0.4/tsBSS/NAMESPACE | 5 - tsBSS-0.4/tsBSS/R/FixNA.R | 22 ++++ tsBSS-0.4/tsBSS/R/PVC.R |only tsBSS-0.4/tsBSS/R/PVCwrap.R |only tsBSS-0.4/tsBSS/R/TIKwrap.R | 5 + tsBSS-0.4/tsBSS/R/gFOBI.R | 31 ++++-- tsBSS-0.4/tsBSS/R/gJADE.R | 31 ++++-- tsBSS-0.4/tsBSS/R/gSOBI.R |only tsBSS-0.4/tsBSS/R/lbtest.R |only tsBSS-0.4/tsBSS/R/lbwrap.R |only tsBSS-0.4/tsBSS/R/summary.tssdr.R | 2 tsBSS-0.4/tsBSS/R/vSOBI.R | 25 ++++- tsBSS-0.4/tsBSS/data |only tsBSS-0.4/tsBSS/inst/ChangeLog | 6 + tsBSS-0.4/tsBSS/man/FixNA.Rd | 23 +++- tsBSS-0.4/tsBSS/man/PVC.Rd |only tsBSS-0.4/tsBSS/man/WeeklyReturnsData.Rd |only tsBSS-0.4/tsBSS/man/gFOBI.Rd | 26 ++++- tsBSS-0.4/tsBSS/man/gJADE.Rd | 26 ++++- tsBSS-0.4/tsBSS/man/gSOBI.Rd |only tsBSS-0.4/tsBSS/man/lbtest.Rd |only tsBSS-0.4/tsBSS/man/print.bssvol.Rd |only tsBSS-0.4/tsBSS/man/print.lbtest.Rd |only tsBSS-0.4/tsBSS/man/summary.tssdr.Rd | 5 - tsBSS-0.4/tsBSS/man/tsBSS-package.Rd | 17 ++- tsBSS-0.4/tsBSS/man/tssdr.Rd | 8 - tsBSS-0.4/tsBSS/man/vSOBI.Rd | 21 +++- tsBSS-0.4/tsBSS/src/bb.c | 8 + tsBSS-0.4/tsBSS/src/tsBSS.cpp | 151 +++++++++++++++++++++++++++++++ tsBSS-0.4/tsBSS/src/tsBSS.h | 5 + 33 files changed, 407 insertions(+), 81 deletions(-)
Title: Reverse Geocoding with the Photon Geocoder for OpenStreetMap,
Google Maps, and Bing
Description: Function revgeo() allows you to use the Photon geocoder for OpenStreetMap <http://photon.komoot.de>, Google Maps <http://maps.google.com>, and Bing <https://www.bingmapsportal.com> to reverse geocode coordinate pairs with minimal hassle.
Author: Michael Hudecheck [aut, cre]
Maintainer: Michael Hudecheck <michael.hudecheck@gess.ethz.ch>
Diff between revgeo versions 0.11 dated 2017-05-03 and 0.15 dated 2017-11-17
DESCRIPTION | 12 +- MD5 | 6 - R/revgeo.R | 347 ++++++++++++++++++++++++++++++++++++++++------------------ man/revgeo.Rd | 10 - 4 files changed, 258 insertions(+), 117 deletions(-)
Title: Maximum Likelihood Estimation of Relatedness using EM Algorithm
Description: Inference of relatedness coefficients from a bi-allelic genotype matrix using a Maximum Likelihood estimation, Laporte, F., Charcosset, A. and Mary-Huard, T. (2017) <doi:10.1111/biom.12634>.
Author: Fabien Laporte, Tristan Mary-Huard
Maintainer: Fabien Laporte <fabien.laporte@inra.fr>
Diff between Relatedness versions 1.4 dated 2016-06-03 and 2.0 dated 2017-11-17
DESCRIPTION | 16 +++++----- MD5 | 9 +++-- NAMESPACE | 2 - man/Relatedness-package.Rd | 8 ++--- src/BoucleEMacc.c | 67 ++++++++++++++++++++++++++++++++++++++++++-- src/registerDynamicSymbol.c |only 6 files changed, 83 insertions(+), 19 deletions(-)
Title: Visualizing and Analyzing Mass Spectrometry Related Data in
Proteomics
Description: Helps with quality checks, visualizations
and analysis of mass spectrometry data, coming from proteomics
experiments. The package is developed, tested and used at the Functional
Genomics Center Zurich. We use this package mainly for prototyping,
teaching, and having fun with proteomics data. But it can also be
used to do data analysis for small scale data sets.
Author: Christian Panse [aut, cre] (0000-0003-1975-3064),
Jonas Grossmann [aut] (0000-0002-6899-9020),
Simon Barkow-Oesterreicher [ctb]
Maintainer: Christian Panse <cp@fgcz.ethz.ch>
Diff between protViz versions 0.2.37 dated 2017-10-12 and 0.2.45 dated 2017-11-17
protViz-0.2.37/protViz/R/findNN_.R |only protViz-0.2.37/protViz/man/as.psmSet.Rd |only protViz-0.2.37/protViz/man/findNN_.Rd |only protViz-0.2.37/protViz/vignettes/HexNAc_PTM_markerFinder.csv |only protViz-0.2.37/protViz/vignettes/graphics/protViz-016.pdf |only protViz-0.2.37/protViz/vignettes/graphics/protViz-018.pdf |only protViz-0.2.37/protViz/vignettes/graphics/protViz-ANOVA.pdf |only protViz-0.2.37/protViz/vignettes/graphics/protViz-LFQtrellis.pdf |only protViz-0.2.37/protViz/vignettes/graphics/protViz-digest.pdf |only protViz-0.2.37/protViz/vignettes/graphics/protViz-featureDensityPlot.pdf |only protViz-0.2.37/protViz/vignettes/graphics/protViz-iTRAQboxplot.pdf |only protViz-0.2.37/protViz/vignettes/graphics/protViz-iTRAQboxplot2.pdf |only protViz-0.2.37/protViz/vignettes/graphics/protViz-iTRAQqqnorm.pdf |only protViz-0.2.37/protViz/vignettes/graphics/protViz-image1.pdf |only protViz-0.2.37/protViz/vignettes/graphics/protViz-image2.pdf |only protViz-0.2.37/protViz/vignettes/graphics/protViz-insilico.pdf |only protViz-0.2.37/protViz/vignettes/graphics/protViz-peakplot.pdf |only protViz-0.2.37/protViz/vignettes/jss.dtx |only protViz-0.2.37/protViz/vignettes/jss.pdf |only protViz-0.2.37/protViz/vignettes/jsslogo.jpg |only protViz-0.2.45/protViz/DESCRIPTION | 25 +- protViz-0.2.45/protViz/MD5 | 92 ++++----- protViz-0.2.45/protViz/NAMESPACE | 21 +- protViz-0.2.45/protViz/R/PTM_MarkerFinder.R | 4 protViz-0.2.45/protViz/R/RcppExports.R |only protViz-0.2.45/protViz/R/deisotoper.R | 2 protViz-0.2.45/protViz/R/findNN.R | 4 protViz-0.2.45/protViz/R/mascot.R | 83 +++++++- protViz-0.2.45/protViz/R/protViz-package.R |only protViz-0.2.45/protViz/R/psm.R | 12 - protViz-0.2.45/protViz/R/zzz.R | 2 protViz-0.2.45/protViz/README.md | 24 ++ protViz-0.2.45/protViz/build/vignette.rds |binary protViz-0.2.45/protViz/demo/quantification.R | 2 protViz-0.2.45/protViz/inst/CITATION | 2 protViz-0.2.45/protViz/inst/NEWS.Rd | 9 protViz-0.2.45/protViz/inst/doc/PTM_MarkerFinder.Rnw | 2 protViz-0.2.45/protViz/inst/doc/PTM_MarkerFinder.pdf |binary protViz-0.2.45/protViz/inst/doc/poster.Rnw | 2 protViz-0.2.45/protViz/inst/doc/poster.pdf |binary protViz-0.2.45/protViz/inst/doc/protViz.R | 86 ++++---- protViz-0.2.45/protViz/inst/doc/protViz.Rnw | 95 +++------ protViz-0.2.45/protViz/inst/doc/protViz.pdf |binary protViz-0.2.45/protViz/inst/extdata |only protViz-0.2.45/protViz/inst/shiny-examples/PTM_MarkerFinder/ui.R | 5 protViz-0.2.45/protViz/inst/unitTests/test_fasta.R |only protViz-0.2.45/protViz/man/fasta.Rd |only protViz-0.2.45/protViz/man/findNN.Rd | 25 ++ protViz-0.2.45/protViz/man/fragmentIons.Rd | 17 + protViz-0.2.45/protViz/man/mascot.rd | 2 protViz-0.2.45/protViz/man/psmSet.Rd |only protViz-0.2.45/protViz/src/Makevars | 6 protViz-0.2.45/protViz/src/RcppExports.cpp |only protViz-0.2.45/protViz/src/fasta.cpp |only protViz-0.2.45/protViz/src/fcat.c | 4 protViz-0.2.45/protViz/src/findNN.c | 2 protViz-0.2.45/protViz/src/findNN_.cpp | 98 +++++++--- protViz-0.2.45/protViz/src/protViz_init.c | 16 + protViz-0.2.45/protViz/vignettes/PTM_MarkerFinder.Rnw | 2 protViz-0.2.45/protViz/vignettes/poster.Rnw | 2 protViz-0.2.45/protViz/vignettes/protViz.Rnw | 95 +++------ 61 files changed, 438 insertions(+), 303 deletions(-)
Title: Discriminating Well Surveyed Spatial Units from Exhaustive
Biodiversity Databases
Description: It uses species accumulation curves and diverse estimators to assess, at the same time, the levels of survey coverage in multiple geographic cells of a size defined by the user or polygons. It also enables the geographical depiction of observed species richness, survey effort and completeness values including a background with administrative areas.
Author: Cástor Guisande González and Jorge M. Lobo
Maintainer: Cástor Guisande González <castor@uvigo.es>
Diff between KnowBR versions 1.3 dated 2017-09-22 and 1.5 dated 2017-11-17
DESCRIPTION | 8 ++--- MD5 | 27 ++++++++++------- NAMESPACE | 10 +++--- R/KnowB.R | 27 +++++++++-------- R/KnowBPolygon.R | 79 +++++++++++++++++++++++++++++++------------------- R/SurveyQ.R |only data/Estimators.RData |binary man/Estimators.Rd | 2 - man/MapPolygon.Rd | 6 +-- man/SurveyQ.Rd |only man/figures/F2.jpg |binary man/figures/F3.jpg |binary man/figures/F4.jpg |binary man/figures/F5.jpg |binary man/figures/F6.jpg |only man/figures/F7.jpg |only man/figures/F8.jpg |only 17 files changed, 94 insertions(+), 65 deletions(-)
Title: Generalised Joint Regression Modelling
Description: Routines for fitting various joint regression models, with several types of covariate effects, in the presence of associated error equations, endogeneity, non-random sample selection or partial observability.
Author: Giampiero Marra <giampiero.marra@ucl.ac.uk> and Rosalba Radice <r.radice@bbk.ac.uk>
Maintainer: Giampiero Marra <giampiero.marra@ucl.ac.uk>
Diff between GJRM versions 0.1-2 dated 2017-09-22 and 0.1-3 dated 2017-11-17
GJRM-0.1-2/GJRM/R/vis.SemiParBIV.r |only GJRM-0.1-2/GJRM/man/vis.SemiParBIV.Rd |only GJRM-0.1-3/GJRM/ChangeLog | 5 ++ GJRM-0.1-3/GJRM/DESCRIPTION | 6 +- GJRM-0.1-3/GJRM/MD5 | 54 ++++++++++++---------- GJRM-0.1-3/GJRM/NAMESPACE | 4 - GJRM-0.1-3/GJRM/R/AT.r | 35 +++++++++++++- GJRM-0.1-3/GJRM/R/SemiParBIV.fit.R | 15 +++--- GJRM-0.1-3/GJRM/R/SemiParBIV.r | 15 +----- GJRM-0.1-3/GJRM/R/SemiParTRIV.r | 21 ++------ GJRM-0.1-3/GJRM/R/copulaSampleSel.r | 13 ----- GJRM-0.1-3/GJRM/R/cov.c.r |only GJRM-0.1-3/GJRM/R/gamlss.r | 12 ----- GJRM-0.1-3/GJRM/R/gjrm.r | 10 ---- GJRM-0.1-3/GJRM/R/int.postcheck.R | 2 GJRM-0.1-3/GJRM/R/jc.probs.r | 27 +++++++++-- GJRM-0.1-3/GJRM/R/jc.probs1.r | 52 +++++++++++++++++++++ GJRM-0.1-3/GJRM/R/jc.probs2.r | 64 +++++++++++++++++++++++++-- GJRM-0.1-3/GJRM/R/jc.probs3.r | 53 +++++++++++++++++++++- GJRM-0.1-3/GJRM/R/jc.probs4.r | 52 +++++++++++++++++++++ GJRM-0.1-3/GJRM/R/jc.probs5.r | 56 ++++++++++++++++++++++- GJRM-0.1-3/GJRM/R/jc.probs6.r | 1 GJRM-0.1-3/GJRM/R/pream.wm.r | 2 GJRM-0.1-3/GJRM/R/pred.mvt.r |only GJRM-0.1-3/GJRM/R/print.summary.SemiParBIV.r | 2 GJRM-0.1-3/GJRM/R/susutsn.r | 14 +++++ GJRM-0.1-3/GJRM/R/vis.gam2.r |only GJRM-0.1-3/GJRM/R/vis.gjrm.r |only GJRM-0.1-3/GJRM/man/eta.tr.Rd | 2 GJRM-0.1-3/GJRM/man/gjrm.Rd | 17 +++---- GJRM-0.1-3/GJRM/man/pred.mvt.Rd |only GJRM-0.1-3/GJRM/man/vis.gjrm.Rd |only 32 files changed, 410 insertions(+), 124 deletions(-)
Title: Estimation of Extreme Conditional Quantiles and Probabilities
Description: Extreme value theory, nonparametric kernel estimation, tail
conditional probabilities, extreme conditional quantile, adaptive estimation,
quantile regression, survival probabilities.
Author: Gilles Durrieu, Ion Grama, Kevin Jaunatre, Quang-Khoai Pham, Jean-Marie
Tricot
Maintainer: Kevin Jaunatre <kevin.jaunatre@univ-ubs.fr>
Diff between extremefit versions 0.2.2 dated 2017-03-21 and 0.2.3 dated 2017-11-17
DESCRIPTION | 10 +++---- MD5 | 64 ++++++++++++++++++++++----------------------- R/PackageOxygen.R | 60 ++++++++++++++++++------------------------ man/Biweight.kernel.Rd | 1 man/Burr-Distribution.Rd | 3 -- man/CriticalValue.Rd | 1 man/Epa.kernel.Rd | 1 man/Gaussian.kernel.Rd | 1 man/Pareto-Distribution.Rd | 3 -- man/Pareto-mix.Rd | 3 -- man/Rectangular.kernel.Rd | 1 man/Triang.kernel.Rd | 1 man/TruncGauss.kernel.Rd | 1 man/bandwidth.CV.Rd | 7 ++-- man/bandwidth.grid.Rd | 1 man/bootCI.Rd | 1 man/bootCI.ts.Rd | 2 - man/goftest.Rd | 1 man/goftest.hill.adapt.Rd | 1 man/goftest.hill.ts.Rd | 1 man/hill.Rd | 7 ++-- man/hill.adapt.Rd | 7 ++-- man/hill.ts.Rd | 1 man/plot.hill.Rd | 1 man/plot.hill.adapt.Rd | 1 man/pparetoCP.Rd | 1 man/predict.hill.Rd | 1 man/predict.hill.adapt.Rd | 1 man/predict.hill.ts.Rd | 1 man/probgrid.Rd | 1 man/rburr.dependent.Rd | 1 man/wecdf.Rd | 1 man/wquantile.Rd | 1 33 files changed, 76 insertions(+), 113 deletions(-)
Title: Modeling Spatial Poisson and Related Point Processes
Description: Implements classes and methods for modeling spatial point patterns using inhomogeneous Poisson point processes, where the intensity surface is assumed to be analogous to a finite additive mixture of normal components and the number of components is a finite, fixed or random integer. Extensions to the marked inhomogeneous Poisson point processes case are also presented. We provide an extensive suite of R functions that can be used to simulate, visualize and model point patterns, estimate the parameters of the models, assess convergence of the algorithms and perform model selection and checking in the proposed modeling context.
Author: Jiaxun Chen <chenjiaxun9@hotmail.com>
and Athanasios (Sakis) Christou Micheas <micheasa@missouri.edu>.
Significant contributions on the package skeleton creation, plotting functions and other code by
Yuchen Wang <ycwang0712@gmail.com>
Maintainer: Sakis Micheas <micheasa@missouri.edu>
Diff between sppmix versions 1.0.1 dated 2017-03-31 and 1.0.2 dated 2017-11-17
DESCRIPTION | 17 - MD5 | 209 ++++++++--------- NAMESPACE | 7 NEWS | 9 R/GetKLEst.R | 5 R/RcppExports.R | 40 +++ R/approximations.R | 18 - R/datasets.R | 26 +- R/est_intensity_np.R | 5 R/est_mix_intensity.R | 87 +++++-- R/get_post.R | 148 ++++-------- R/kstest2d.R | 10 R/label_switching.R | 14 - R/markedIPPP_mix.R | 94 ++++--- R/mc_gof_test.R | 7 R/mcmc_plots.R | 66 ++--- R/normmix.R | 115 +++++---- R/normmix_plots.R | 85 +++--- R/other_funcs.R | 23 - R/other_plots.R | 192 ++++++++++----- R/postgen_ops.R | 20 - R/rsppmix.R | 38 ++- R/select_mix_model.R | 5 R/sppmix.R | 29 -- R/summary_post.R | 10 data/Tornadoes2011MO.rda |binary data/TornadoesAll.rda |binary data/USAStatesCounties2016.rda |only data/datalist | 1 inst/doc/tutorials_link.Rmd | 2 inst/doc/tutorials_link.html | 10 inst/include/sppmix.h | 38 ++- man/CompareSurfs.Rd | 12 man/Count_pts.Rd | 12 man/Datasets.Rd | 36 ++ man/Demo_sppmix.Rd | 6 man/FixLS_da.Rd | 12 man/GetBDCompfit.Rd | 12 man/GetBDTable.Rd | 12 man/GetBMA.Rd | 12 man/GetDensityValues.Rd | 12 man/GetIPPPLikValue.Rd | 12 man/GetKLEst.Rd | 12 man/GetMAPEst.Rd | 30 +- man/GetMAPLabels.Rd | 12 man/GetPMEst.Rd | 12 man/GetStats.Rd | 12 man/Get_Rdiag.Rd | 12 man/MaternCov.Rd | 12 man/PlotUSAStates.Rd | 20 - man/Plots_off.Rd | 12 man/Save_AllOpenRglGraphs.Rd | 18 - man/add_title.Rd | 21 - man/approx_normmix.Rd | 14 - man/check_labels.Rd | 12 man/demo_mix.Rd | 12 man/density_plots.Rd | 12 man/dnormmix.Rd | 13 - man/drop_realization.Rd | 12 man/est_MIPPP_cond_loc.Rd | 23 - man/est_MIPPP_cond_mark.Rd | 34 +- man/est_intensity_np.Rd | 12 man/est_mix.Rd | 24 - man/helper_functions.Rd | 4 man/kstest2d.Rd | 12 man/kstest2dsurf.Rd | 12 man/mc_gof.Rd | 15 - man/normmix.Rd | 16 - man/openwin_sppmix.Rd | 6 man/plot.bdmcmc_res.Rd | 12 man/plot.damcmc_res.Rd | 12 man/plot.intensity_surface.Rd | 12 man/plot.sppmix.Rd | 20 - man/plot2dPP.Rd | 12 man/plot_CompDist.Rd | 12 man/plot_MPP_fields.Rd | 12 man/plot_MPP_probs.Rd | 12 man/plot_autocorr.Rd | 12 man/plot_avgsurf.Rd | 12 man/plot_chains.Rd | 12 man/plot_convdiags.Rd | 12 man/plot_density.Rd | 16 - man/plot_ind.Rd | 12 man/plot_runmean.Rd | 12 man/plot_true_labels.Rd | 12 man/plotmix_2d.Rd | 12 man/plotmix_3d.Rd | 12 man/rGRF.Rd | 12 man/rMIPPP_cond_loc.Rd | 12 man/rMIPPP_cond_mark.Rd | 12 man/rmixsurf.Rd | 33 +- man/rnormmix.Rd | 20 - man/rsppmix.Rd | 28 +- man/selectMix.Rd | 12 man/sppmix.Rd | 48 +-- man/summary.bdmcmc_res.Rd | 12 man/summary.damcmc_res.Rd | 12 man/to_int_surf.Rd | 12 src/ApproxFuncs_sppmix.cpp | 2 src/BDMCMC2d_sppmix.cpp | 1 src/DAMCMC2d_sppmix.cpp | 502 ++++++++++++++++++++++++++++++++++++++++- src/HelperFuncs_sppmix.cpp | 89 +++++++ src/MIPPCondLoc_sppmix.cpp | 137 ++++++++--- src/OpsPostGens_sppmix.cpp | 85 ++++++ src/RcppExports.cpp | 134 ++++++++++ vignettes/tutorials_link.Rmd | 2 106 files changed, 2108 insertions(+), 1159 deletions(-)
Title: Generalized Autoregressive Score Models
Description: Simulate, estimate and forecast using univariate and multivariate GAS models
as described in Ardia et al. (2016) <https://ssrn.com/abstract=2825380>.
Author: Leopoldo Catania [aut,cre], Kris Boudt [ctb], David Ardia [ctb]
Maintainer: Leopoldo Catania <leopoldo.catania@econ.au.dk>
Diff between GAS versions 0.2.4 dated 2017-07-23 and 0.2.5 dated 2017-11-17
GAS-0.2.4/GAS/inst/ExtensionTests/run_InformationMatrix.R |only GAS-0.2.4/GAS/inst/doc/GAS_vignette_0.2.4.Rnw |only GAS-0.2.4/GAS/inst/doc/GAS_vignette_0.2.4.pdf |only GAS-0.2.4/GAS/vignettes/GAS_vignette_0.2.4.Rnw |only GAS-0.2.5/GAS/ChangeLog | 8 + GAS-0.2.5/GAS/DESCRIPTION | 8 - GAS-0.2.5/GAS/MD5 | 45 ++++----- GAS-0.2.5/GAS/R/Testing.R | 6 - GAS-0.2.5/GAS/build/partial.rdb |binary GAS-0.2.5/GAS/build/vignette.rds |binary GAS-0.2.5/GAS/inst/CITATION | 2 GAS-0.2.5/GAS/inst/ExtensionTests/run_Forecast.R | 10 +- GAS-0.2.5/GAS/inst/ExtensionTests/run_Score.R | 1 GAS-0.2.5/GAS/inst/ExtensionTests/run_Simulate.R | 56 +---------- GAS-0.2.5/GAS/inst/ExtensionTests/run_TestThat.R | 3 GAS-0.2.5/GAS/inst/doc/AddNewDistribution.pdf |binary GAS-0.2.5/GAS/inst/doc/GAS_vignette_0.2.5.Rnw |only GAS-0.2.5/GAS/inst/doc/GAS_vignette_0.2.5.pdf |only GAS-0.2.5/GAS/man/GAS-package.Rd | 4 GAS-0.2.5/GAS/man/StockIndices.Rd | 21 ---- GAS-0.2.5/GAS/man/UniGASFit.Rd | 70 +------------- GAS-0.2.5/GAS/src/Moments.cpp | 1 GAS-0.2.5/GAS/src/ScoreWrap.cpp | 1 GAS-0.2.5/GAS/src/skellam.cpp | 1 GAS-0.2.5/GAS/src/snorm.cpp | 1 GAS-0.2.5/GAS/src/sstd.cpp | 3 GAS-0.2.5/GAS/vignettes/GAS_vignette_0.2.5.Rnw |only 27 files changed, 62 insertions(+), 179 deletions(-)
Title: Rmetrics - Modelling Extreme Events in Finance
Description: Provides functions for analysing
and modelling extreme events in financial time Series. The
topics include: (i) data pre-processing, (ii) explorative
data analysis, (iii) peak over threshold modelling, (iv) block
maxima modelling, (v) estimation of VaR and CVaR, and (vi) the
computation of the extreme index.
Author: Diethelm Wuertz [aut],
Tobias Setz [cre],
Yohan Chalabi [ctb]
Maintainer: Tobias Setz <tobias.setz@live.com>
Diff between fExtremes versions 3010.81 dated 2013-12-17 and 3042.82 dated 2017-11-17
fExtremes-3010.81/fExtremes/data/bmwRet.csv.gz |only fExtremes-3010.81/fExtremes/data/danishClaims.csv.gz |only fExtremes-3042.82/fExtremes/ChangeLog | 5 fExtremes-3042.82/fExtremes/DESCRIPTION | 32 fExtremes-3042.82/fExtremes/MD5 | 64 - fExtremes-3042.82/fExtremes/NAMESPACE | 140 -- fExtremes-3042.82/fExtremes/R/DataPreprocessing.R | 14 fExtremes-3042.82/fExtremes/R/ExtremeIndex.R | 12 fExtremes-3042.82/fExtremes/R/ExtremesData.R | 12 fExtremes-3042.82/fExtremes/R/GevDistribution.R | 12 fExtremes-3042.82/fExtremes/R/GevFit.R | 12 fExtremes-3042.82/fExtremes/R/GevMdaEstimation.R | 1088 ++++++++---------- fExtremes-3042.82/fExtremes/R/GevPrintPlotSummary.R | 12 fExtremes-3042.82/fExtremes/R/GevRisk.R | 12 fExtremes-3042.82/fExtremes/R/GevSim.R | 12 fExtremes-3042.82/fExtremes/R/GpdDistribution.R | 12 fExtremes-3042.82/fExtremes/R/GpdFit.R | 12 fExtremes-3042.82/fExtremes/R/GpdPlot.R | 12 fExtremes-3042.82/fExtremes/R/GpdRisk.R | 12 fExtremes-3042.82/fExtremes/R/GpdShow.R |only fExtremes-3042.82/fExtremes/R/GpdSim.R | 12 fExtremes-3042.82/fExtremes/R/GpdSummary.R | 12 fExtremes-3042.82/fExtremes/R/MeanExcessFit.R | 12 fExtremes-3042.82/fExtremes/R/ValueAtRisk.R | 12 fExtremes-3042.82/fExtremes/R/meanExcessPlot.R | 12 fExtremes-3042.82/fExtremes/R/metrics.R | 49 fExtremes-3042.82/fExtremes/R/zzz.R | 97 - fExtremes-3042.82/fExtremes/data/bmwRet.csv |only fExtremes-3042.82/fExtremes/data/danishClaims.csv |only fExtremes-3042.82/fExtremes/inst/unitTests/Makefile | 2 fExtremes-3042.82/fExtremes/man/00Extremes-package.Rd |only fExtremes-3042.82/fExtremes/man/DataPreprocessing.Rd | 400 +++--- fExtremes-3042.82/fExtremes/man/GevRisk.Rd | 2 fExtremes-3042.82/fExtremes/man/GpdDistribution.Rd | 2 fExtremes-3042.82/fExtremes/man/GpdModelling.Rd | 12 fExtremes-3042.82/fExtremes/man/GpdRisk.Rd | 11 36 files changed, 884 insertions(+), 1226 deletions(-)
Title: Rmetrics - Pricing and Evaluating Exotic Option
Description: Provides a collection of functions to evaluate
barrier options, Asian options, binary options, currency
translated options, lookback options, multiple asset options
and multiple exercise options.
Author: Diethelm Wuertz [aut],
Tobias Setz [cre]
Maintainer: Tobias Setz <tobias.setz@live.com>
Diff between fExoticOptions versions 2152.78 dated 2012-11-07 and 3042.80 dated 2017-11-17
ChangeLog | 5 DESCRIPTION | 29 +-- MD5 | 24 +-- NAMESPACE | 55 ------- R/AsianOptions.R | 12 - R/BarrierOptions.R | 12 - R/BinaryOptions.R | 12 - R/CurrencyTranslatedOptions.R | 12 - R/LookbackOptions.R | 12 - R/MultipleAssetsOptions.R | 12 - R/MultipleExercisesOptions.R | 12 - R/zzz.R | 94 +++++------ man/AsianOptions.Rd | 330 +++++++++++++++++++++--------------------- 13 files changed, 245 insertions(+), 376 deletions(-)
More information about fExoticOptions at CRAN
Permanent link
Title: Spatial Implementation of Bayesian Networks and Mapping
Description: Allows spatial implementation of Bayesian networks and mapping in geographical space. It makes maps of expected value (or most likely state) given known and unknown conditions, maps of uncertainty measured as coefficient of variation or Shannon index (entropy), maps of probability associated to any states of any node of the network. Some additional features are provided as well: parallel processing options, data discretization routines and function wrappers designed for users with minimal knowledge of the R language. Outputs can be exported to any common GIS format. Development was funded by the European Union FP7 (2007-2013), under project ROBIN (<http://robinproject.info>).
Author: Dario Masante [aut, cre]
Maintainer: Dario Masante <dario.masante@gmail.com>
Diff between bnspatial versions 1.0.2 dated 2017-07-21 and 1.0.3 dated 2017-11-17
DESCRIPTION | 8 +++---- MD5 | 18 ++++++++-------- NEWS.md | 8 +++++++ R/bnspatial.R | 3 +- R/queryNet.R | 40 +++++++++++++++++++++++++++++------- build/vignette.rds |binary inst/doc/bnspatial.R | 2 - inst/doc/bnspatial.Rmd | 2 - inst/doc/bnspatial.html | 52 ++++++++++++++++++++++++------------------------ vignettes/bnspatial.Rmd | 2 - 10 files changed, 84 insertions(+), 51 deletions(-)
Title: Dynamic Documents for R
Description: Convert R Markdown documents into a variety of formats.
Author: JJ Allaire [aut],
Yihui Xie [aut, cre] (0000-0003-0645-5666),
Jonathan McPherson [aut],
Javier Luraschi [aut],
Kevin Ushey [aut],
Aron Atkins [aut],
Hadley Wickham [aut],
Joe Cheng [aut],
Winston Chang [aut],
Jeff Allen [ctb],
Roy Storey [ctb],
Rob Hyndman [ctb],
Ruben Arslan [ctb],
RStudio, Inc. [cph],
jQuery Foundation [cph] (jQuery library),
jQuery contributors [ctb, cph] (jQuery library; authors listed in
inst/rmd/h/jquery-AUTHORS.txt),
jQuery UI contributors [ctb, cph] (jQuery UI library; authors listed in
inst/rmd/h/jqueryui-AUTHORS.txt),
Mark Otto [ctb] (Bootstrap library),
Jacob Thornton [ctb] (Bootstrap library),
Bootstrap contributors [ctb] (Bootstrap library),
Twitter, Inc [cph] (Bootstrap library),
Alexander Farkas [ctb, cph] (html5shiv library),
Scott Jehl [ctb, cph] (Respond.js library),
Ivan Sagalaev [ctb, cph] (highlight.js library),
Greg Franko [ctb, cph] (tocify library),
John MacFarlane [ctb, cph] (Pandoc templates),
Google, Inc. [ctb, cph] (ioslides library),
Dave Raggett [ctb] (slidy library),
W3C [cph] (slidy library),
Dave Gandy [ctb, cph] (Font-Awesome),
Ben Sperry [ctb] (Ionicons),
Drifty [cph] (Ionicons),
Aidan Lister [ctb, cph] (jQuery StickyTabs)
Maintainer: Yihui Xie <xie@yihui.name>
Diff between rmarkdown versions 1.7 dated 2017-11-10 and 1.8 dated 2017-11-17
DESCRIPTION | 12 MD5 | 66 ++--- NAMESPACE | 1 R/base64.R | 106 -------- R/draft.R | 2 R/github_document.R | 75 ++---- R/html_dependencies.R | 2 R/html_document.R | 3 R/html_document_base.R | 11 R/html_paged.R | 17 - R/html_resource_copy.R | 4 R/html_resources.R | 2 R/ioslides_presentation.R | 7 R/md_document.R | 3 R/output_format.R | 121 ++++------ R/pandoc.R | 20 - R/params.R | 16 - R/performance.R | 8 R/relative_to.R | 2 R/render_site.R | 9 R/shiny.R | 26 +- R/shiny_prerendered.R | 6 R/util.R | 27 +- R/word_document.R | 4 R/zzz.R | 2 inst/NEWS | 13 + inst/rmarkdown/templates/github_document/resources/github.css | 61 ++--- inst/rmd/h/default.html | 2 man/rmarkdown-package.Rd | 4 tests/shiny |only tests/testthat/test-htmlparse.R | 2 tests/testthat/test-ioslides.R | 2 tests/testthat/test-params.R | 10 33 files changed, 275 insertions(+), 371 deletions(-)
Title: Robust and Sparse Regression via Gamma-Divergence
Description: Robust regression via gamma-divergence with L1, elastic net and ridge.
Author: Takayuki Kawashima
Maintainer: Takayuki Kawashima <t-kawa@ism.ac.jp>
Diff between gamreg versions 0.2 dated 2016-10-09 and 0.3 dated 2017-11-17
DESCRIPTION | 8 ++-- MD5 | 8 ++-- R/cv_gam.R | 82 +++++++++++++++++++------------------------------- man/cv_gam.Rd | 6 +-- src/sparse_gamreg.cpp | 13 ++++++- 5 files changed, 54 insertions(+), 63 deletions(-)
Title: Color Calculations with Emphasis on Spectral Data
Description: Calculate with spectral properties of light sources, materials, cameras, eyes, and scanners.
Build complex systems from simpler parts using a spectral product algebra. For light sources,
compute CCT and CRI. For object colors, compute optimal colors and Logvinenko coordinates.
Work with the standard CIE illuminants and color matching functions, and read spectra from
text files, including CGATS files. A user guide and 5 vignettes are included.
Author: Glenn Davis [aut, cre]
Maintainer: Glenn Davis <gdavis@gluonics.com>
Diff between colorSpec versions 0.5-3 dated 2016-05-16 and 0.6-1 dated 2017-11-17
colorSpec-0.5-3/colorSpec/inst/doc/colorSpec-guide.odt |only colorSpec-0.5-3/colorSpec/inst/doc/colorSpec-guide.pdf |only colorSpec-0.5-3/colorSpec/inst/extdata/filters |only colorSpec-0.6-1/colorSpec/ChangeLog | 26 colorSpec-0.6-1/colorSpec/DESCRIPTION | 12 colorSpec-0.6-1/colorSpec/MD5 | 105 ++ colorSpec-0.6-1/colorSpec/NAMESPACE | 13 colorSpec-0.6-1/colorSpec/NEWS.md |only colorSpec-0.6-1/colorSpec/R/CGATS.R | 359 +++++++--- colorSpec-0.6-1/colorSpec/R/Krinov.R |only colorSpec-0.6-1/colorSpec/R/colorSpec.R | 2 colorSpec-0.6-1/colorSpec/R/colorSpec.interpolate.R |only colorSpec-0.6-1/colorSpec/R/colorSpec.ops.R | 19 colorSpec-0.6-1/colorSpec/R/colorSpec.optimal.R | 225 ------ colorSpec-0.6-1/colorSpec/R/colorSpec.plot.R | 39 - colorSpec-0.6-1/colorSpec/R/colorSpec.read.R | 96 +- colorSpec-0.6-1/colorSpec/R/colorSpec.summary.R | 8 colorSpec-0.6-1/colorSpec/R/datasets.R | 2 colorSpec-0.6-1/colorSpec/R/logging.R | 33 colorSpec-0.6-1/colorSpec/R/reparam.R |only colorSpec-0.6-1/colorSpec/R/sysdata.rda |binary colorSpec-0.6-1/colorSpec/build/vignette.rds |binary colorSpec-0.6-1/colorSpec/data/colorSpec.rda |binary colorSpec-0.6-1/colorSpec/inst/COPYRIGHTS | 107 ++ colorSpec-0.6-1/colorSpec/inst/doc/PhenolRed.R |only colorSpec-0.6-1/colorSpec/inst/doc/PhenolRed.Rmd |only colorSpec-0.6-1/colorSpec/inst/doc/PhenolRed.html |only colorSpec-0.6-1/colorSpec/inst/doc/blueflame.pdf |binary colorSpec-0.6-1/colorSpec/inst/doc/colorSpec-guide.R |only colorSpec-0.6-1/colorSpec/inst/doc/colorSpec-guide.Rmd |only colorSpec-0.6-1/colorSpec/inst/doc/colorSpec-guide.html |only colorSpec-0.6-1/colorSpec/inst/doc/gallery.pdf |binary colorSpec-0.6-1/colorSpec/inst/doc/lens-aging.pdf |binary colorSpec-0.6-1/colorSpec/inst/doc/optimals.pdf |binary colorSpec-0.6-1/colorSpec/inst/extdata/objects |only colorSpec-0.6-1/colorSpec/inst/extdata/sources/moonlight.txt |only colorSpec-0.6-1/colorSpec/inst/extdata/stains/PhenolRed-Fig7.jpg |only colorSpec-0.6-1/colorSpec/inst/extdata/stains/PhenolRed-Fig7.txt |only colorSpec-0.6-1/colorSpec/inst/extdata/stains/PhenolRed.png |only colorSpec-0.6-1/colorSpec/inst/extdata/targets/moon-O4HSe.png |only colorSpec-0.6-1/colorSpec/man/bind.Rd | 9 colorSpec-0.6-1/colorSpec/man/interpolate.Rd |only colorSpec-0.6-1/colorSpec/man/plotPatchesRGB.Rd | 2 colorSpec-0.6-1/colorSpec/man/product.Rd | 2 colorSpec-0.6-1/colorSpec/man/readCGATS.Rd |only colorSpec-0.6-1/colorSpec/man/readSpectra.Rd | 61 + colorSpec-0.6-1/colorSpec/tests/A70.ti3 |only colorSpec-0.6-1/colorSpec/tests/test-CGATS-2-1S-swap.txt |only colorSpec-0.6-1/colorSpec/tests/test-CGATS-2-1S.txt |only colorSpec-0.6-1/colorSpec/tests/test-CGATS-2-2S.txt |only colorSpec-0.6-1/colorSpec/tests/test-CGATS.R |only colorSpec-0.6-1/colorSpec/tests/test-product.R | 6 colorSpec-0.6-1/colorSpec/tests/test-read.R | 12 colorSpec-0.6-1/colorSpec/vignettes/PhenolRed.Rmd |only colorSpec-0.6-1/colorSpec/vignettes/bibliography.bib |only colorSpec-0.6-1/colorSpec/vignettes/colorSpec-guide.Rmd |only colorSpec-0.6-1/colorSpec/vignettes/institute-of-mathematical-statistics.csl |only colorSpec-0.6-1/colorSpec/vignettes/iso690-numeric-brackets-cs.csl |only colorSpec-0.6-1/colorSpec/vignettes/iso690-numeric-en.csl |only colorSpec-0.6-1/colorSpec/vignettes/personal.csl |only colorSpec-0.6-1/colorSpec/vignettes/proofs.txt |only colorSpec-0.6-1/colorSpec/vignettes/tables |only 62 files changed, 688 insertions(+), 450 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-08-21 0.4.3
Title: Computationally Efficient Queue Simulation
Description: Implementation of a computationally efficient method for
simulating queues with arbitrary arrival and service times.
Author: Anthony Ebert [aut, cre]
Maintainer: Anthony Ebert <anthonyebert+CRAN@gmail.com>
Diff between queuecomputer versions 0.8.1 dated 2017-04-11 and 0.8.2 dated 2017-11-17
DESCRIPTION | 8 ++-- MD5 | 58 +++++++++++++++---------------- NEWS.md | 11 +++++ R/RcppExports.R | 4 +- R/core_queuefunctions.R | 4 +- R/dplyr_plugins.R | 63 ++++++++++++++-------------------- R/post_analysis.R | 9 ++++ R/utils.R | 35 ++++++++++-------- README.md | 13 +++---- build/vignette.rds |binary inst/doc/Howto.html | 48 ++++++++++++------------- inst/doc/MMk_queues.html | 74 ++++++++++++++++++++-------------------- man/as.server.list.Rd | 1 man/as.server.stepfun.Rd | 1 man/average_queue.Rd | 1 man/create_batches.Rd | 1 man/depart.Rd | 1 man/lag_step.Rd | 1 man/plot.queue_list.Rd | 1 man/print.queue_list.Rd | 1 man/print.summary_queue_list.Rd | 1 man/ql_summary.Rd | 1 man/queue.Rd | 1 man/queue_lengths.Rd | 5 +- man/queue_step.Rd | 1 man/summary.queue_list.Rd | 1 man/wait_step.Rd | 1 src/RcppExports.cpp | 4 +- src/init.c | 8 ++-- src/loops.cpp | 4 +- 30 files changed, 180 insertions(+), 182 deletions(-)