Title: The MCFS-ID Algorithm for Feature Selection and Interdependency
Discovery
Description: MCFS-ID (Monte Carlo Feature Selection and Interdependency Discovery) is a Monte Carlo method-based tool for feature selection. It also allows for the discovery of interdependencies between the relevant features. MCFS-ID is particularly suitable for the analysis of high-dimensional, 'small n large p' transactional and biological data. M.Draminski, A.Rada-Iglesias, S.Enroth, C.Wadelius, J. Koronacki, J.Komorowski (2008) <doi:10.1093/bioinformatics/btm486>.
Author: Michal Draminski [aut, cre],
Jacek Koronacki [aut],
Julian Zubek [ctb]
Maintainer: Michal Draminski <michal.draminski@ipipan.waw.pl>
Diff between rmcfs versions 1.2.7 dated 2017-11-24 and 1.2.8 dated 2017-12-11
rmcfs-1.2.7/rmcfs/vignettes/jss2621_bib.ltx |only rmcfs-1.2.8/rmcfs/DESCRIPTION | 8 rmcfs-1.2.8/rmcfs/MD5 | 13 - rmcfs-1.2.8/rmcfs/NEWS.md | 4 rmcfs-1.2.8/rmcfs/build/vignette.rds |binary rmcfs-1.2.8/rmcfs/inst/doc/jss2621.ltx | 247 +++++++++++++++++++++++++++- rmcfs-1.2.8/rmcfs/inst/doc/jss2621.pdf |binary rmcfs-1.2.8/rmcfs/vignettes/jss2621.ltx | 247 +++++++++++++++++++++++++++- 8 files changed, 506 insertions(+), 13 deletions(-)
Title: Foreach Parallel Adaptor for 'parallel'
Description: Provides a parallel backend for the %dopar% function using
the multicore functionality of the parallel package.
Author: Rich Calaway [cre],
Revolution Analytics [aut, cph],
Steve Weston [aut]
Maintainer: Rich Calaway <richcala@microsoft.com>
Diff between doMC versions 1.3.4 dated 2015-10-13 and 1.3.5 dated 2017-12-11
DESCRIPTION | 11 +++++------ MD5 | 10 +++++----- NEWS | 7 +++++-- build/vignette.rds |binary inst/doc/gettingstartedMC.pdf |binary tests/doRUnit.R | 2 +- 6 files changed, 16 insertions(+), 14 deletions(-)
Title: Create Blogs and Websites with R Markdown
Description: Write blog posts and web pages in R Markdown. This package supports
the static site generator 'Hugo' (<https://gohugo.io>) best, and it also
supports 'Jekyll' (<http://jekyllrb.com>) and 'Hexo' (<https://hexo.io>).
Author: Yihui Xie [aut, cre] (0000-0003-0645-5666),
Beilei Bian [ctb],
Forest Fang [ctb],
Hiroaki Yutani [ctb],
JJ Allaire [ctb],
Kevin Ushey [ctb],
RStudio Inc [cph]
Maintainer: Yihui Xie <xie@yihui.name>
Diff between blogdown versions 0.3 dated 2017-11-13 and 0.4 dated 2017-12-11
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- NEWS.md | 10 ++++++++++ R/hugo.R | 3 ++- R/install.R | 13 ++++++++++--- R/render.R | 7 ++++--- R/utils.R | 15 +++++++++++++-- README.md | 2 ++ 8 files changed, 52 insertions(+), 20 deletions(-)
Title: Database Interface and 'MariaDB' Driver
Description: Implements a 'DBI'-compliant interface to 'MariaDB' (<https://mariadb.org/>) and 'MySQL' (<https://www.mysql.com/>) databases.
Author: Kirill Müller [aut, cre],
Jeroen Ooms [aut],
David James [aut],
Saikat DebRoy [aut],
Hadley Wickham [aut],
Jeffrey Horner [aut],
RStudio [cph],
Kungliga Tekniska Högskolan [ctb] (Source code for timegm)
Maintainer: Kirill Müller <krlmlr+r@mailbox.org>
Diff between RMariaDB versions 1.0-2 dated 2017-10-04 and 1.0-4 dated 2017-12-11
RMariaDB-1.0-2/RMariaDB/src/MariaConnection.cpp |only RMariaDB-1.0-2/RMariaDB/src/MariaConnection.h |only RMariaDB-1.0-2/RMariaDB/src/MariaResult.cpp |only RMariaDB-1.0-2/RMariaDB/src/MariaResult.h |only RMariaDB-1.0-4/RMariaDB/DESCRIPTION | 8 RMariaDB-1.0-4/RMariaDB/MD5 | 74 ++-- RMariaDB-1.0-4/RMariaDB/NEWS.md | 12 RMariaDB-1.0-4/RMariaDB/R/MariaDBConnection.R | 60 +++ RMariaDB-1.0-4/RMariaDB/R/MariaDBResult.R | 2 RMariaDB-1.0-4/RMariaDB/R/RcppExports.R | 48 +-- RMariaDB-1.0-4/RMariaDB/R/connect.R | 3 RMariaDB-1.0-4/RMariaDB/R/query.R | 48 ++- RMariaDB-1.0-4/RMariaDB/R/table.R | 43 ++ RMariaDB-1.0-4/RMariaDB/R/transaction.R | 3 RMariaDB-1.0-4/RMariaDB/README.md | 2 RMariaDB-1.0-4/RMariaDB/man/MariaDBConnection-class.Rd | 12 RMariaDB-1.0-4/RMariaDB/man/RMariaDB-package.Rd | 4 RMariaDB-1.0-4/RMariaDB/man/dbConnect-MariaDBDriver-method.Rd | 3 RMariaDB-1.0-4/RMariaDB/man/mariadb-tables.Rd | 9 RMariaDB-1.0-4/RMariaDB/man/query.Rd | 12 RMariaDB-1.0-4/RMariaDB/man/result-meta.Rd | 3 RMariaDB-1.0-4/RMariaDB/man/transactions.Rd | 3 RMariaDB-1.0-4/RMariaDB/src/DbConnection.cpp |only RMariaDB-1.0-4/RMariaDB/src/DbConnection.h |only RMariaDB-1.0-4/RMariaDB/src/DbResult.cpp |only RMariaDB-1.0-4/RMariaDB/src/DbResult.h |only RMariaDB-1.0-4/RMariaDB/src/Makevars.win | 2 RMariaDB-1.0-4/RMariaDB/src/MariaResultImpl.cpp |only RMariaDB-1.0-4/RMariaDB/src/MariaResultImpl.h |only RMariaDB-1.0-4/RMariaDB/src/MariaResultPrep.cpp | 33 +- RMariaDB-1.0-4/RMariaDB/src/MariaResultPrep.h | 20 - RMariaDB-1.0-4/RMariaDB/src/MariaResultSimple.cpp | 22 - RMariaDB-1.0-4/RMariaDB/src/MariaResultSimple.h | 22 - RMariaDB-1.0-4/RMariaDB/src/MariaRow.cpp | 2 RMariaDB-1.0-4/RMariaDB/src/MariaTypes.cpp | 3 RMariaDB-1.0-4/RMariaDB/src/RMariaDB_types.h | 14 RMariaDB-1.0-4/RMariaDB/src/RcppExports.cpp | 155 +++++----- RMariaDB-1.0-4/RMariaDB/src/connection.cpp | 69 +++- RMariaDB-1.0-4/RMariaDB/src/integer64.h | 8 RMariaDB-1.0-4/RMariaDB/src/result.cpp | 50 ++- RMariaDB-1.0-4/RMariaDB/src/win32/timegm.c | 4 RMariaDB-1.0-4/RMariaDB/tests/testthat/test-queries.R | 10 RMariaDB-1.0-4/RMariaDB/tools/winlibs.R | 9 43 files changed, 475 insertions(+), 297 deletions(-)
Title: Access Open Data Through the 'Junar' API
Description: The 'Junar' API is a commercial platform to organize and publish data
<http://www.junar.com>. It has been used in a number of national and local
government Open Data initiatives in Latin America and the USA. This package
is a wrapper to make it easier to access data made public through the 'Junar'
API.
Author: Frans van Dunné [aut, cre]
Maintainer: Frans van Dunné <frans@ixpantia.com>
Diff between junr versions 0.1.2 dated 2017-08-09 and 0.1.3 dated 2017-12-11
DESCRIPTION | 6 MD5 | 29 - build/vignette.rds |binary inst/doc/acceder-junar-api.R | 4 inst/doc/acceder-junar-api.Rmd | 8 inst/doc/acceder-junar-api.html | 988 ++++++++++++++++--------------------- inst/doc/access-junar-api.R | 4 inst/doc/access-junar-api.Rmd | 2 inst/doc/access-junar-api.html | 1002 ++++++++++++++++---------------------- tests/testthat/helper-data.R |only tests/testthat/test-getdata.R | 8 tests/testthat/test-inspectdata.R | 24 tests/testthat/test-utils.R | 15 vignettes/acceder-junar-api.Rmd | 8 vignettes/acceder-junar-api.md |only vignettes/access-junar-api.Rmd | 2 vignettes/access-junar-api.md |only 17 files changed, 923 insertions(+), 1177 deletions(-)
Title: Imputation for Proteomics
Description: Functions to analyse missing value mechanisms and to impute data sets in the context of bottom-up MS-based proteomics.
Author: Quentin Giai Gianetto
Maintainer: Quentin Giai Gianetto <quentin2g@yahoo.fr>
Diff between imp4p versions 0.4 dated 2017-06-01 and 0.5 dated 2017-12-11
DESCRIPTION | 6 - MD5 | 20 ++-- NAMESPACE | 2 R/RcppExports.R | 10 +- R/impute_igcda.R | 117 ++++++++++++++-------------- R/impute_pa.R | 92 ++++++++++++++++------ R/mi_mix.R | 179 ++++++++++++++++++++++++-------------------- R/translatedRandomBeta.R |only man/impute_igcda.Rd | 2 man/impute_pa.Rd | 19 +++- man/translatedRandomBeta.Rd |only src/RcppExports.cpp | 10 +- 12 files changed, 263 insertions(+), 194 deletions(-)
Title: Formal Psychological Models of Categorization and Learning
Description: Formal psychological models of categorization and learning, independently-replicated data sets against which to test them, and simulation archives.
Author: Andy Wills, Lenard Dome, Charlotte Edmunds, Garrett Honke, Angus Inkster, Rene Schegelmilch, Stuart Spicer
Maintainer: Andy Wills <andy@willslab.co.uk>
Diff between catlearn versions 0.4 dated 2017-02-23 and 0.5 dated 2017-12-11
catlearn-0.4/catlearn/R/slpRW.R |only catlearn-0.4/catlearn/src/init.c |only catlearn-0.5/catlearn/DESCRIPTION | 17 catlearn-0.5/catlearn/MD5 | 57 + catlearn-0.5/catlearn/NAMESPACE | 9 catlearn-0.5/catlearn/R/RcppExports.R | 12 catlearn-0.5/catlearn/R/act2probrat.R |only catlearn-0.5/catlearn/R/nosof88exalcove.R | 4 catlearn-0.5/catlearn/R/nosof88exalcove_opt.R |only catlearn-0.5/catlearn/R/nosof88protoalcove.R | 5 catlearn-0.5/catlearn/R/nosof88protoalcove_opt.R |only catlearn-0.5/catlearn/R/nosof94exalcove.R | 7 catlearn-0.5/catlearn/R/nosof94exalcove_opt.R |only catlearn-0.5/catlearn/R/nosof94train.R | 2 catlearn-0.5/catlearn/R/shin92exalcove.R | 4 catlearn-0.5/catlearn/R/shin92exalcove_opt.R |only catlearn-0.5/catlearn/R/shin92protoalcove.R | 5 catlearn-0.5/catlearn/R/shin92protoalcove_opt.R |only catlearn-0.5/catlearn/R/slpDIVA.R | 608 ++++++++++---------- catlearn-0.5/catlearn/R/slpMBMF.R |only catlearn-0.5/catlearn/R/stsimGCM.R |only catlearn-0.5/catlearn/man/act2probrat.Rd |only catlearn-0.5/catlearn/man/nosof88exalcove.Rd | 15 catlearn-0.5/catlearn/man/nosof88exalcove_opt.Rd |only catlearn-0.5/catlearn/man/nosof88protoalcove.Rd | 25 catlearn-0.5/catlearn/man/nosof88protoalcove_opt.Rd |only catlearn-0.5/catlearn/man/nosof94exalcove.Rd | 22 catlearn-0.5/catlearn/man/nosof94exalcove_opt.Rd |only catlearn-0.5/catlearn/man/shin92exalcove.Rd | 20 catlearn-0.5/catlearn/man/shin92exalcove_opt.Rd |only catlearn-0.5/catlearn/man/shin92protoalcove.Rd | 19 catlearn-0.5/catlearn/man/shin92protoalcove_opt.Rd |only catlearn-0.5/catlearn/man/slpBM.Rd |only catlearn-0.5/catlearn/man/slpDIVA.Rd | 318 +++++----- catlearn-0.5/catlearn/man/slpMBMF.Rd |only catlearn-0.5/catlearn/man/slpRW.Rd | 277 ++++----- catlearn-0.5/catlearn/man/stsimGCM.Rd |only catlearn-0.5/catlearn/src/RcppExports.cpp | 43 + catlearn-0.5/catlearn/src/slpBM.cpp |only catlearn-0.5/catlearn/src/slpRW.cpp |only 40 files changed, 777 insertions(+), 692 deletions(-)
Title: Penalised Maximum Likelihood for Survival Analysis Models
Description: Estimate the regression coefficients and the baseline hazard
of proportional hazard Cox models using maximum penalised likelihood.
A 'non-parametric' smooth estimate of the baseline hazard function
is provided.
Author: Dominique-Laurent Couturier, Jun Ma, Stephane Heritier, Maurizio Manuguerra.
Maintainer: Maurizio Manuguerra <maurizio.manuguerra@mq.edu.au>
Diff between survivalMPL versions 0.1.2 dated 2017-10-13 and 0.2 dated 2017-12-11
survivalMPL-0.1.2/survivalMPL/src |only survivalMPL-0.2/survivalMPL/DESCRIPTION | 8 survivalMPL-0.2/survivalMPL/MD5 | 28 survivalMPL-0.2/survivalMPL/NAMESPACE | 3 survivalMPL-0.2/survivalMPL/NEWS |only survivalMPL-0.2/survivalMPL/R/coxph.r | 1588 ++++++++--------- survivalMPL-0.2/survivalMPL/R/methods.R |only survivalMPL-0.2/survivalMPL/man/coef.coxph_mpl.Rd | 6 survivalMPL-0.2/survivalMPL/man/coxph_mpl.Rd | 17 survivalMPL-0.2/survivalMPL/man/coxph_mpl.control.Rd | 23 survivalMPL-0.2/survivalMPL/man/coxph_mpl.object.Rd | 2 survivalMPL-0.2/survivalMPL/man/plot.coxph_mpl.Rd | 6 survivalMPL-0.2/survivalMPL/man/predict.coxph_mpl.Rd | 6 survivalMPL-0.2/survivalMPL/man/residuals.coxph_mpl.Rd | 48 survivalMPL-0.2/survivalMPL/man/summary.coxph_mpl.Rd | 10 survivalMPL-0.2/survivalMPL/man/survivalMPL-package.Rd | 6 16 files changed, 857 insertions(+), 894 deletions(-)
Title: Tools to Create Gene Sets
Description: A set of functions to create SQL tables of gene and SNP information and compose them into a SNP Set, for example for use with the RSNPset package, or to export to a PLINK set.
Author: Chanhee Yi, Alexander Sibley, and Kouros Owzar
Maintainer: Alexander Sibley <alexander.sibley@dm.duke.edu>
Diff between snplist versions 0.18 dated 2017-08-14 and 0.18.1 dated 2017-12-11
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- NEWS | 4 ++++ R/makeGeneSet.R | 12 ++++++------ inst/doc/snplist.Rnw | 2 +- inst/doc/snplist.pdf |binary man/snplist-package.Rd | 4 ++-- vignettes/snplist.Rnw | 2 +- 8 files changed, 25 insertions(+), 21 deletions(-)
Title: Analysis of Incubation Data
Description: Suite of functions to study animal incubation.
At the core of incR
lays an algorithm that allows for the scoring of
incubation behaviour. Additionally, several functions
extract biologically relevant metrics of incubation such as off-bout number
and off-bout duration - for a review of avian incubation studies,
see Nests, Eggs, and Incubation: New ideas about avian reproduction (2015)
edited by D. Charles Deeming and S. James Reynolds <doi:10.1093/acprof:oso/9780198718666.001.0001>.
Author: Pablo Capilla-Lasheras [aut, cre]
Maintainer: Pablo Capilla-Lasheras <pacapilla@gmail.com>
Diff between incR versions 1.0.1 dated 2017-10-20 and 1.0.2 dated 2017-12-11
DESCRIPTION | 8 ++++---- MD5 | 18 +++++++++--------- NEWS.md | 8 +++++++- R/inRt.R | 6 +++--- R/incRbouts.R | 11 ++++++----- inst/doc/incR_pipeline.Rmd | 23 ++++++++++++----------- inst/doc/incR_pipeline.html | 15 ++++++++------- man/incRbouts.Rd | 10 +++++----- man/incRt.Rd | 6 +++--- vignettes/incR_pipeline.Rmd | 23 ++++++++++++----------- 10 files changed, 69 insertions(+), 59 deletions(-)
Title: Quantile Regression Neural Network
Description: Fit quantile regression neural network models with optional
left censoring, partial monotonicity constraints, generalized additive
model constraints, and the ability to fit multiple non-crossing quantile
functions following Cannon (2011) <doi:10.1016/j.cageo.2010.07.005>
and Cannon (2017) <doi:10.17605/OSF.IO/WG7SN>.
Author: Alex J. Cannon
Maintainer: Alex J. Cannon <alex.cannon@canada.ca>
Diff between qrnn versions 2.0 dated 2017-12-05 and 2.0.1 dated 2017-12-11
DESCRIPTION | 6 +++--- MD5 | 12 +++++++----- NAMESPACE | 3 ++- R/qrnn2.R |only man/gam.style.Rd | 4 ++-- man/qrnn-package.Rd | 30 +++++++++++++++++++++++------- man/qrnn.cost.Rd | 4 ++-- man/qrnn2.Rd |only 8 files changed, 39 insertions(+), 20 deletions(-)
Title: Isotonic Proportional Hazards Model
Description: Nonparametric estimation of an isotonic covariate effect for proportional hazards model.
Author: Yunro Chung [cre], Anastasia Ivanova, Michael G. Hudgens and Jason P. Fine
Maintainer: Yunro Chung <ychung@fredhutch.org>
Diff between isoph versions 1.1.1 dated 2017-06-11 and 1.1.2 dated 2017-12-11
DESCRIPTION | 8 MD5 | 14 - R/isoph.R | 248 ++++++++++++++-------------- R/isoph.ti.R | 445 ++++++++++++++++++++++++++------------------------- R/plot.isoph.R | 81 ++++----- R/print.isoph.R | 50 ++--- man/isoph-package.Rd | 40 ++-- man/isoph.Rd | 36 ---- 8 files changed, 456 insertions(+), 466 deletions(-)
Title: Inferential Statistics
Description: Select set of parametric and non-parametric statistical tests. 'inferr' builds upon the solid set of
statistical tests provided in 'stats' package by including additional data types as inputs, expanding and
restructuring the test results. The tests included are t tests, variance tests, proportion tests, chi square tests, Levene's test, McNemar Test, Cochran's Q test and Runs test.
Author: Aravind Hebbali [aut, cre]
Maintainer: Aravind Hebbali <hebbali.aravind@gmail.com>
Diff between inferr versions 0.1.1 dated 2017-05-02 and 0.2.0 dated 2017-12-11
inferr-0.1.1/inferr/R/anova.R |only inferr-0.1.1/inferr/R/binom-prob-test.R |only inferr-0.1.1/inferr/R/chi_sq_contingency.R |only inferr-0.1.1/inferr/R/chisquare-gof.R |only inferr-0.1.1/inferr/R/cochran-q-test.R |only inferr-0.1.1/inferr/R/exam.R |only inferr-0.1.1/inferr/R/hsb.R |only inferr-0.1.1/inferr/R/ind-ttest.R |only inferr-0.1.1/inferr/R/levene-test.R |only inferr-0.1.1/inferr/R/mcnemar-test.R |only inferr-0.1.1/inferr/R/one-samp-prop-test.R |only inferr-0.1.1/inferr/R/one-samp-var-test.R |only inferr-0.1.1/inferr/R/output.R |only inferr-0.1.1/inferr/R/paired-ttest.R |only inferr-0.1.1/inferr/R/runs.R |only inferr-0.1.1/inferr/R/t-test.R |only inferr-0.1.1/inferr/R/treatment.R |only inferr-0.1.1/inferr/R/treatment2.R |only inferr-0.1.1/inferr/R/two-samp-prop-test.R |only inferr-0.1.1/inferr/R/two-samp-var-test-shiny.R |only inferr-0.1.1/inferr/R/two-samp-var-test.R |only inferr-0.1.1/inferr/R/utils.R |only inferr-0.1.1/inferr/R/zzz.R |only inferr-0.1.1/inferr/man/binom_calc.Rd |only inferr-0.1.1/inferr/man/chisq_gof.Rd |only inferr-0.1.1/inferr/man/chisq_test.Rd |only inferr-0.1.1/inferr/man/cochran_test.Rd |only inferr-0.1.1/inferr/man/ind_ttest.Rd |only inferr-0.1.1/inferr/man/levene_test.Rd |only inferr-0.1.1/inferr/man/mcnemar_test.Rd |only inferr-0.1.1/inferr/man/os_vartest.Rd |only inferr-0.1.1/inferr/man/owanova.Rd |only inferr-0.1.1/inferr/man/paired_ttest.Rd |only inferr-0.1.1/inferr/man/prop_test.Rd |only inferr-0.1.1/inferr/man/runs_test.Rd |only inferr-0.1.1/inferr/man/ts_prop_test.Rd |only inferr-0.1.1/inferr/man/ttest.Rd |only inferr-0.1.1/inferr/man/var_test.Rd |only inferr-0.2.0/inferr/DESCRIPTION | 13 inferr-0.2.0/inferr/MD5 | 217 ++++++---- inferr-0.2.0/inferr/NAMESPACE | 89 ++-- inferr-0.2.0/inferr/NEWS.md | 6 inferr-0.2.0/inferr/R/RcppExports.R | 4 inferr-0.2.0/inferr/R/infer-anova.R |only inferr-0.2.0/inferr/R/infer-binom-test.R |only inferr-0.2.0/inferr/R/infer-chisq-assoc-test.R |only inferr-0.2.0/inferr/R/infer-chisq-gof-test.R |only inferr-0.2.0/inferr/R/infer-cochran-q-test.R |only inferr-0.2.0/inferr/R/infer-data-exam.R |only inferr-0.2.0/inferr/R/infer-data-hsb.R |only inferr-0.2.0/inferr/R/infer-data-treatment.R |only inferr-0.2.0/inferr/R/infer-data-treatment2.R |only inferr-0.2.0/inferr/R/infer-launch-shiny-app.R |only inferr-0.2.0/inferr/R/infer-levene-test.R |only inferr-0.2.0/inferr/R/infer-mcnemar-test.R |only inferr-0.2.0/inferr/R/infer-os-prop-test.R |only inferr-0.2.0/inferr/R/infer-os-t-test.R |only inferr-0.2.0/inferr/R/infer-os-var-test.R |only inferr-0.2.0/inferr/R/infer-output.R |only inferr-0.2.0/inferr/R/infer-runs-test.R |only inferr-0.2.0/inferr/R/infer-ts-ind-ttest.R |only inferr-0.2.0/inferr/R/infer-ts-paired-ttest.R |only inferr-0.2.0/inferr/R/infer-ts-prop-test.R |only inferr-0.2.0/inferr/R/infer-ts-var-test.R |only inferr-0.2.0/inferr/R/infer-two-samp-var-test-shiny.R |only inferr-0.2.0/inferr/R/infer-utils.R |only inferr-0.2.0/inferr/R/infer-zzz.R |only inferr-0.2.0/inferr/README.md | 161 +++++++ inferr-0.2.0/inferr/build/vignette.rds |binary inferr-0.2.0/inferr/inst/application |only inferr-0.2.0/inferr/inst/doc/intro.R | 64 +- inferr-0.2.0/inferr/inst/doc/intro.Rmd | 64 +- inferr-0.2.0/inferr/inst/doc/intro.html | 88 ++-- inferr-0.2.0/inferr/man/exam.Rd | 3 inferr-0.2.0/inferr/man/hsb.Rd | 3 inferr-0.2.0/inferr/man/infer_binom_calc.Rd |only inferr-0.2.0/inferr/man/infer_chisq_assoc_test.Rd |only inferr-0.2.0/inferr/man/infer_chisq_gof_test.Rd |only inferr-0.2.0/inferr/man/infer_cochran_qtest.Rd |only inferr-0.2.0/inferr/man/infer_launch_shiny_app.Rd |only inferr-0.2.0/inferr/man/infer_levene_test.Rd |only inferr-0.2.0/inferr/man/infer_mcnemar_test.Rd |only inferr-0.2.0/inferr/man/infer_oneway_anova.Rd |only inferr-0.2.0/inferr/man/infer_os_prop_test.Rd |only inferr-0.2.0/inferr/man/infer_os_t_test.Rd |only inferr-0.2.0/inferr/man/infer_os_var_test.Rd |only inferr-0.2.0/inferr/man/infer_runs_test.Rd |only inferr-0.2.0/inferr/man/infer_ts_ind_ttest.Rd |only inferr-0.2.0/inferr/man/infer_ts_paired_ttest.Rd |only inferr-0.2.0/inferr/man/infer_ts_prop_test.Rd |only inferr-0.2.0/inferr/man/infer_ts_var_test.Rd |only inferr-0.2.0/inferr/man/treatment.Rd | 3 inferr-0.2.0/inferr/man/treatment2.Rd | 3 inferr-0.2.0/inferr/man/var_test_shiny.Rd | 3 inferr-0.2.0/inferr/src/RcppExports.cpp | 4 inferr-0.2.0/inferr/src/init.c | 8 inferr-0.2.0/inferr/tests/testthat/test-anova.R | 41 + inferr-0.2.0/inferr/tests/testthat/test-binom.R | 81 ++- inferr-0.2.0/inferr/tests/testthat/test-chisq.R | 50 +- inferr-0.2.0/inferr/tests/testthat/test-chisqgof.R | 44 +- inferr-0.2.0/inferr/tests/testthat/test-cochran.R | 33 + inferr-0.2.0/inferr/tests/testthat/test-indttest.R | 171 +++++++ inferr-0.2.0/inferr/tests/testthat/test-levene.R | 84 +++ inferr-0.2.0/inferr/tests/testthat/test-mcnemar.R | 59 ++ inferr-0.2.0/inferr/tests/testthat/test-os-vartest.R | 107 ++++ inferr-0.2.0/inferr/tests/testthat/test-output.R | 2 inferr-0.2.0/inferr/tests/testthat/test-paired-test.R | 140 ++++++ inferr-0.2.0/inferr/tests/testthat/test-prop-test.R | 167 ++++++- inferr-0.2.0/inferr/tests/testthat/test-runs.R | 35 + inferr-0.2.0/inferr/tests/testthat/test-ttest.R | 109 ++++- inferr-0.2.0/inferr/tests/testthat/test-two-prop-test.R | 98 +++- inferr-0.2.0/inferr/tests/testthat/test-two-samp-var-test-shiny.R |only inferr-0.2.0/inferr/tests/testthat/test-two-var-test.R | 98 ++++ inferr-0.2.0/inferr/tests/testthat/test-utils.R | 10 inferr-0.2.0/inferr/vignettes/intro.Rmd | 64 +- 115 files changed, 1700 insertions(+), 426 deletions(-)
Title: Flexibly Reshape Data: A Reboot of the Reshape Package
Description: Flexibly restructure and aggregate data using just two
functions: melt and 'dcast' (or 'acast').
Author: Hadley Wickham <h.wickham@gmail.com>
Maintainer: Hadley Wickham <h.wickham@gmail.com>
Diff between reshape2 versions 1.4.2 dated 2016-10-22 and 1.4.3 dated 2017-12-11
DESCRIPTION | 16 +++++++++------- MD5 | 45 +++++++++++++++++++++++---------------------- NEWS.md |only R/RcppExports.R | 2 +- README.md | 12 ++++++++++-- man/add_margins.Rd | 1 - man/cast.Rd | 1 - man/colsplit.Rd | 1 - man/french_fries.Rd | 1 - man/guess_value.Rd | 1 - man/margins.Rd | 1 - man/melt.Rd | 1 - man/melt.array.Rd | 2 +- man/melt.data.frame.Rd | 2 +- man/melt.default.Rd | 2 +- man/melt.list.Rd | 2 +- man/melt_check.Rd | 1 - man/parse_formula.Rd | 1 - man/recast.Rd | 1 - man/smiths.Rd | 1 - man/tips.Rd | 1 - src/RcppExports.cpp | 12 +++++++++++- src/melt.cpp | 44 +++++++++++++++++++++++++++++++------------- tests/testthat/test-melt.r | 12 ++++++++++++ 24 files changed, 101 insertions(+), 62 deletions(-)
Title: Distributions for Generalized Additive Models for Location Scale
and Shape
Description: A set of distributions which can be used for modelling the response variables in Generalized Additive Models for Location Scale and Shape, Rigby and Stasinopoulos (2005), <doi:10.1111/j.1467-9876.2005.00510.x>. The distributions can be continuous, discrete or mixed distributions. Extra distributions can be created, by transforming, any continuous distribution defined on the real line, to a distribution defined on ranges 0 to infinity or 0 to 1, by using a "log" or a "logit" transformation respectively.
Author: c(person("Mikis", "Stasinopoulos", role = c("aut", "cre", "cph"),
email = "mikis.stasinopoulos@gamlss.org"),
person("Bob", "Rigby", role = c("aut")),
person("Calliope", "Akantziliotou", role = "ctb"),
person("Vlasios", "Voudouris", role = "ctb",
email= "vlasios.voudouris@abm-analytics.com"),
person("Gillian", "Heller", role = "ctb"),
person("Raydonal", "Ospina", role = "ctb",
email= "rospina@ime.usp.br"),
person("Nicoletta", "Motpan", role = "ctb"),
person("Fiona", "McElduff", role = "ctb"),
person("Majid", "Djennad", role = "ctb"),
person("Marco", "Enea", role = "ctb"),
person("Alexios", "Ghalanos", role = "ctb"),
person("Christos", "Argyropoulos", role = "ctb")
)
Maintainer: Mikis Stasinopoulos <mikis.stasinopoulos@gamlss.org>
Diff between gamlss.dist versions 5.0-3 dated 2017-10-24 and 5.0-4 dated 2017-12-11
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- R/NBF.R | 2 +- man/NBF.Rd | 2 +- src/getBI_C2.c | 6 +++--- 5 files changed, 13 insertions(+), 13 deletions(-)
Title: R Interface to the Europe PubMed Central RESTful Web Service
Description: An R Client for the Europe PubMed Central RESTful Web Service
(see <https://europepmc.org/RestfulWebService> for more information). It
gives access to both metadata on life science literature and open access
full texts. Europe PMC indexes all PubMed content and other literature
sources including Agricola, a bibliographic database of citations to the
agricultural literature, or Biological Patents. In addition to bibliographic
metadata, the client allows users to fetch citations and reference lists.
Links between life-science literature and other EBI databases, including
ENA, PDB or ChEMBL are also accessible. No registration or API key is
required. See the vignettes for usage examples.
Author: Najko Jahn [aut, cre, cph],
Maëlle Salmon [ctb]
Maintainer: Najko Jahn <najko.jahn@gmail.com>
Diff between europepmc versions 0.1.4 dated 2017-03-20 and 0.2 dated 2017-12-11
europepmc-0.1.4/europepmc/R/tmp.r |only europepmc-0.2/europepmc/DESCRIPTION | 23 europepmc-0.2/europepmc/MD5 | 106 europepmc-0.2/europepmc/NAMESPACE | 4 europepmc-0.2/europepmc/NEWS.md | 12 europepmc-0.2/europepmc/R/epmc_citations.r | 61 europepmc-0.2/europepmc/R/epmc_db.r | 67 europepmc-0.2/europepmc/R/epmc_db_count.r | 27 europepmc-0.2/europepmc/R/epmc_details.r | 33 europepmc-0.2/europepmc/R/epmc_hits_trend.R |only europepmc-0.2/europepmc/R/epmc_lablinks.r | 90 europepmc-0.2/europepmc/R/epmc_lablinks_count.r | 13 europepmc-0.2/europepmc/R/epmc_profile.r | 4 europepmc-0.2/europepmc/R/epmc_refs.r | 62 europepmc-0.2/europepmc/R/epmc_search.r | 156 - europepmc-0.2/europepmc/R/epmc_tm.r | 72 europepmc-0.2/europepmc/R/epmc_tm_count.r | 21 europepmc-0.2/europepmc/R/europepmc.r | 3 europepmc-0.2/europepmc/R/utils.r | 58 europepmc-0.2/europepmc/README.md | 828 ----- europepmc-0.2/europepmc/build/vignette.rds |binary europepmc-0.2/europepmc/inst/doc/evergreenreviewgraphs.R |only europepmc-0.2/europepmc/inst/doc/evergreenreviewgraphs.Rmd |only europepmc-0.2/europepmc/inst/doc/evergreenreviewgraphs.html |only europepmc-0.2/europepmc/inst/doc/introducing-europepmc.R | 72 europepmc-0.2/europepmc/inst/doc/introducing-europepmc.Rmd | 294 -- europepmc-0.2/europepmc/inst/doc/introducing-europepmc.html | 1396 ++++------ europepmc-0.2/europepmc/inst/image |only europepmc-0.2/europepmc/inst/imageunnamed-chunk-4-1.png |only europepmc-0.2/europepmc/man/epmc_citations.Rd | 1 europepmc-0.2/europepmc/man/epmc_db.Rd | 1 europepmc-0.2/europepmc/man/epmc_db_count.Rd | 1 europepmc-0.2/europepmc/man/epmc_details.Rd | 1 europepmc-0.2/europepmc/man/epmc_ftxt.Rd | 1 europepmc-0.2/europepmc/man/epmc_ftxt_book.Rd | 1 europepmc-0.2/europepmc/man/epmc_hits.Rd | 1 europepmc-0.2/europepmc/man/epmc_hits_trend.Rd |only europepmc-0.2/europepmc/man/epmc_lablinks.Rd | 1 europepmc-0.2/europepmc/man/epmc_lablinks_count.Rd | 1 europepmc-0.2/europepmc/man/epmc_profile.Rd | 5 europepmc-0.2/europepmc/man/epmc_refs.Rd | 1 europepmc-0.2/europepmc/man/epmc_search.Rd | 41 europepmc-0.2/europepmc/man/epmc_search_.Rd | 8 europepmc-0.2/europepmc/man/epmc_tm.Rd | 6 europepmc-0.2/europepmc/man/epmc_tm_count.Rd | 1 europepmc-0.2/europepmc/tests/testthat/test_epmc_citations.r | 4 europepmc-0.2/europepmc/tests/testthat/test_epmc_db.r | 3 europepmc-0.2/europepmc/tests/testthat/test_epmc_db_count.r | 3 europepmc-0.2/europepmc/tests/testthat/test_epmc_details.r | 4 europepmc-0.2/europepmc/tests/testthat/test_epmc_hits_trend.R |only europepmc-0.2/europepmc/tests/testthat/test_epmc_lablinks.r | 5 europepmc-0.2/europepmc/tests/testthat/test_epmc_lablinks_count.r | 3 europepmc-0.2/europepmc/tests/testthat/test_epmc_profile.r | 11 europepmc-0.2/europepmc/tests/testthat/test_epmc_refs.r | 3 europepmc-0.2/europepmc/tests/testthat/test_epmc_search.r | 30 europepmc-0.2/europepmc/tests/testthat/test_epmc_tm.r | 3 europepmc-0.2/europepmc/tests/testthat/test_epmc_tm_count.r | 3 europepmc-0.2/europepmc/vignettes/evergreenreviewgraphs.Rmd |only europepmc-0.2/europepmc/vignettes/introducing-europepmc.Rmd | 294 -- 59 files changed, 1360 insertions(+), 2479 deletions(-)
Title: Generate Descriptive Statistics & Explore Statistical
Distributions
Description: Generate descriptive statistics such as measures of location,
dispersion, frequency tables, cross tables, group summaries and multiple
one/two way tables. Visualize and compute percentiles/probabilities of
normal, t, f, chi square and binomial distributions.
Author: Aravind Hebbali [aut, cre]
Maintainer: Aravind Hebbali <hebbali.aravind@gmail.com>
Diff between descriptr versions 0.2.0 dated 2017-08-31 and 0.3.0 dated 2017-12-11
descriptr-0.2.0/descriptr/R/binom-dist.R |only descriptr-0.2.0/descriptr/R/chi-dist.R |only descriptr-0.2.0/descriptr/R/cross-mult.R |only descriptr-0.2.0/descriptr/R/cross-table.R |only descriptr-0.2.0/descriptr/R/describe.R |only descriptr-0.2.0/descriptr/R/f-dist.R |only descriptr-0.2.0/descriptr/R/freq-cat.R |only descriptr-0.2.0/descriptr/R/freq-cont.R |only descriptr-0.2.0/descriptr/R/freq-mult.R |only descriptr-0.2.0/descriptr/R/group-summary.R |only descriptr-0.2.0/descriptr/R/hsb.R |only descriptr-0.2.0/descriptr/R/mult-table.R |only descriptr-0.2.0/descriptr/R/normal-dist.R |only descriptr-0.2.0/descriptr/R/output.R |only descriptr-0.2.0/descriptr/R/screener.R |only descriptr-0.2.0/descriptr/R/summary-stats.R |only descriptr-0.2.0/descriptr/R/t-dist.R |only descriptr-0.2.0/descriptr/R/utils.R |only descriptr-0.2.0/descriptr/man/binom_plot.Rd |only descriptr-0.2.0/descriptr/man/chi_plot.Rd |only descriptr-0.2.0/descriptr/man/cross_table.Rd |only descriptr-0.2.0/descriptr/man/f_plot.Rd |only descriptr-0.2.0/descriptr/man/freq_cont.Rd |only descriptr-0.2.0/descriptr/man/freq_table.Rd |only descriptr-0.2.0/descriptr/man/gmean.Rd |only descriptr-0.2.0/descriptr/man/group_summary.Rd |only descriptr-0.2.0/descriptr/man/hmean.Rd |only descriptr-0.2.0/descriptr/man/kurtosis.Rd |only descriptr-0.2.0/descriptr/man/norm_plot.Rd |only descriptr-0.2.0/descriptr/man/oway_tables.Rd |only descriptr-0.2.0/descriptr/man/rindex.Rd |only descriptr-0.2.0/descriptr/man/screener.Rd |only descriptr-0.2.0/descriptr/man/skewness.Rd |only descriptr-0.2.0/descriptr/man/stat_css.Rd |only descriptr-0.2.0/descriptr/man/stat_cvar.Rd |only descriptr-0.2.0/descriptr/man/stat_mdev.Rd |only descriptr-0.2.0/descriptr/man/stat_mode.Rd |only descriptr-0.2.0/descriptr/man/stat_range.Rd |only descriptr-0.2.0/descriptr/man/summary_stats.Rd |only descriptr-0.2.0/descriptr/man/t_plot.Rd |only descriptr-0.2.0/descriptr/man/tailobs.Rd |only descriptr-0.2.0/descriptr/tests/testthat/test-freq-cat.R |only descriptr-0.3.0/descriptr/DESCRIPTION | 13 descriptr-0.3.0/descriptr/MD5 | 211 ++++++---- descriptr-0.3.0/descriptr/NAMESPACE | 82 +++ descriptr-0.3.0/descriptr/NEWS.md | 8 descriptr-0.3.0/descriptr/R/dist-binomial.R |only descriptr-0.3.0/descriptr/R/dist-chisquare.R |only descriptr-0.3.0/descriptr/R/dist-f.R |only descriptr-0.3.0/descriptr/R/dist-normal.R |only descriptr-0.3.0/descriptr/R/dist-t.R |only descriptr-0.3.0/descriptr/R/ds-cross-mult.R |only descriptr-0.3.0/descriptr/R/ds-cross-table.R |only descriptr-0.3.0/descriptr/R/ds-data-hsb.R |only descriptr-0.3.0/descriptr/R/ds-describe.R |only descriptr-0.3.0/descriptr/R/ds-descriptr.R |only descriptr-0.3.0/descriptr/R/ds-freq-cont.R |only descriptr-0.3.0/descriptr/R/ds-freq-mult.R |only descriptr-0.3.0/descriptr/R/ds-freq-table.R |only descriptr-0.3.0/descriptr/R/ds-group-summary.R |only descriptr-0.3.0/descriptr/R/ds-launch-shiny-app.R |only descriptr-0.3.0/descriptr/R/ds-mult-table.R |only descriptr-0.3.0/descriptr/R/ds-multistats.R |only descriptr-0.3.0/descriptr/R/ds-output.R |only descriptr-0.3.0/descriptr/R/ds-screener.R |only descriptr-0.3.0/descriptr/R/ds-summary-stats.R |only descriptr-0.3.0/descriptr/R/ds-utils.R |only descriptr-0.3.0/descriptr/README.md | 204 +++++++++ descriptr-0.3.0/descriptr/build/vignette.rds |binary descriptr-0.3.0/descriptr/inst/application |only descriptr-0.3.0/descriptr/inst/doc/descriptive-stats.R | 33 - descriptr-0.3.0/descriptr/inst/doc/descriptive-stats.Rmd | 58 +- descriptr-0.3.0/descriptr/inst/doc/descriptive-stats.html | 108 ++--- descriptr-0.3.0/descriptr/inst/doc/distributions.R | 68 +-- descriptr-0.3.0/descriptr/inst/doc/distributions.Rmd | 68 +-- descriptr-0.3.0/descriptr/inst/doc/distributions.html | 72 +-- descriptr-0.3.0/descriptr/man/descriptr.Rd |only descriptr-0.3.0/descriptr/man/dist_binom_plot.Rd |only descriptr-0.3.0/descriptr/man/dist_chi_plot.Rd |only descriptr-0.3.0/descriptr/man/dist_f_plot.Rd |only descriptr-0.3.0/descriptr/man/dist_norm_plot.Rd |only descriptr-0.3.0/descriptr/man/dist_t.Rd |only descriptr-0.3.0/descriptr/man/ds_cross_table.Rd |only descriptr-0.3.0/descriptr/man/ds_css.Rd |only descriptr-0.3.0/descriptr/man/ds_cvar.Rd |only descriptr-0.3.0/descriptr/man/ds_freq_cont.Rd |only descriptr-0.3.0/descriptr/man/ds_freq_table.Rd |only descriptr-0.3.0/descriptr/man/ds_gmean.Rd |only descriptr-0.3.0/descriptr/man/ds_group_summary.Rd |only descriptr-0.3.0/descriptr/man/ds_hmean.Rd |only descriptr-0.3.0/descriptr/man/ds_kurtosis.Rd |only descriptr-0.3.0/descriptr/man/ds_launch_shiny_app.Rd |only descriptr-0.3.0/descriptr/man/ds_mdev.Rd |only descriptr-0.3.0/descriptr/man/ds_mode.Rd |only descriptr-0.3.0/descriptr/man/ds_multi_stats.Rd |only descriptr-0.3.0/descriptr/man/ds_oway_tables.Rd |only descriptr-0.3.0/descriptr/man/ds_range.Rd |only descriptr-0.3.0/descriptr/man/ds_rindex.Rd |only descriptr-0.3.0/descriptr/man/ds_screener.Rd |only descriptr-0.3.0/descriptr/man/ds_skewness.Rd |only descriptr-0.3.0/descriptr/man/ds_summary_stats.Rd |only descriptr-0.3.0/descriptr/man/ds_tailobs.Rd |only descriptr-0.3.0/descriptr/man/hsb.Rd | 2 descriptr-0.3.0/descriptr/tests/testthat/Rplots.pdf |only descriptr-0.3.0/descriptr/tests/testthat/test-binom-dist.R | 138 +++--- descriptr-0.3.0/descriptr/tests/testthat/test-chi-dist.R | 102 ++-- descriptr-0.3.0/descriptr/tests/testthat/test-cross-table.R | 16 descriptr-0.3.0/descriptr/tests/testthat/test-describe.R | 202 ++++----- descriptr-0.3.0/descriptr/tests/testthat/test-f-dist.R | 44 +- descriptr-0.3.0/descriptr/tests/testthat/test-freq-cont.R | 14 descriptr-0.3.0/descriptr/tests/testthat/test-freq-table.R |only descriptr-0.3.0/descriptr/tests/testthat/test-group-summary.R | 14 descriptr-0.3.0/descriptr/tests/testthat/test-multistats.R |only descriptr-0.3.0/descriptr/tests/testthat/test-normal-dist.R | 102 ++-- descriptr-0.3.0/descriptr/tests/testthat/test-output.R | 43 -- descriptr-0.3.0/descriptr/tests/testthat/test-screen.R | 10 descriptr-0.3.0/descriptr/tests/testthat/test-summary-stats.R | 6 descriptr-0.3.0/descriptr/tests/testthat/test-t-dist.R | 112 ++--- descriptr-0.3.0/descriptr/vignettes/descriptive-stats.Rmd | 58 +- descriptr-0.3.0/descriptr/vignettes/distributions.Rmd | 68 +-- 120 files changed, 1100 insertions(+), 756 deletions(-)
Title: Searching for Optimal MDS Procedure for Metric and
Interval-Valued Symbolic Data
Description: Selecting the optimal multidimensional scaling (MDS) procedure for metric data via metric MDS (ratio, interval, mspline) and nonmetric MDS (ordinal). Selecting the optimal multidimensional scaling (MDS) procedure for interval-valued symbolic data via metric MDS (ratio, interval, mspline). Selecting the optimal MDS procedure for statistical data referring to the evaluation of tourist attractiveness of Lower Silesian counties (BORG I., GROENEN P.J.F., MAIR P., (2013) <doi:10.1007/978-3-642-31848-1>, DE LEEUW J., MAIR P., (2015) <doi:10.1002/9781118445112.stat06268.pub2>, WALESIAK M., (2016) <doi:10.15611/ekt.2016.2.01>).
Author: Marek Walesiak <marek.walesiak@ue.wroc.pl>, Andrzej Dudek <andrzej.dudek@ue.wroc.pl>
Maintainer: Andrzej Dudek <andrzej.dudek@ue.wroc.pl>
Diff between mdsOpt versions 0.2-1 dated 2017-12-03 and 0.2-2 dated 2017-12-11
DESCRIPTION | 8 ++++---- MD5 | 2 +- 2 files changed, 5 insertions(+), 5 deletions(-)
Title: Generalized Linear Mixed Models using Template Model Builder
Description: Fit linear and generalized linear mixed models with various
extensions, including zero-inflation. The models are fitted using maximum
likelihood estimation via 'TMB' (Template Model Builder). Random effects are
assumed to be Gaussian on the scale of the linear predictor and are integrated
out using the Laplace approximation. Gradients are calculated using automatic
differentiation.
Author: Arni Magnusson [aut],
Hans Skaug [aut],
Anders Nielsen [aut],
Casper Berg [aut],
Kasper Kristensen [aut],
Martin Maechler [aut],
Koen van Bentham [aut],
Ben Bolker [aut],
Mollie Brooks [aut, cre]
Maintainer: Mollie Brooks <mollieebrooks@gmail.com>
Diff between glmmTMB versions 0.1.4 dated 2017-10-26 and 0.2.0 dated 2017-12-11
DESCRIPTION | 8 +- MD5 | 54 +++++++++--------- NAMESPACE | 2 R/VarCorr.R | 14 +++- R/glmmTMB.R | 118 ++++++++++++++++++++++++++++++++--------- R/methods.R | 8 +- R/utils.R | 19 ++++-- inst/doc/covstruct.R | 46 +++++++++++++++ inst/doc/covstruct.html | 84 ++++++++++++++++++++++++----- inst/doc/covstruct.rmd | 101 ++++++++++++++++++++++++++++++++++- inst/doc/glmmTMB.pdf |binary inst/doc/mcmc.html | 4 - inst/doc/miscEx.html | 4 - inst/doc/sim.html | 4 - inst/doc/troubleshooting.html | 6 +- man/confint.glmmTMB.Rd |only man/glmmTMB.Rd | 4 - man/glmmTMBControl.Rd | 5 + man/mkTMBStruc.Rd | 7 +- man/ranef.glmmTMB.Rd | 6 +- man/splitForm.Rd | 5 + src/glmmTMB.cpp | 15 ++--- tests/testthat/test-basics.R | 16 ++--- tests/testthat/test-families.R | 7 +- tests/testthat/test-formulas.R | 4 + tests/testthat/test-methods.R | 21 +++++++ tests/testthat/test-varstruc.R | 12 ++-- tests/testthat/test-weight.R |only vignettes/covstruct.rmd | 101 ++++++++++++++++++++++++++++++++++- 29 files changed, 548 insertions(+), 127 deletions(-)
Title: Embedding Interactive Charts Generated with ECharts Library into
Shiny Applications
Description: Embed interactive charts to their Shiny applications. These charts will be generated by ECharts library developed by Baidu (<http://echarts.baidu.com/>). Current version supports line chart, bar chart, pie chart, scatter plot, gauge, word cloud, radar chart, tree map, and heat map.
Author: Xiaodong Deng [aut, cre],
Hao Zhu [ctr],
Yiheng Li [ctr],
Janet Wagner [ctr],
ChinYong Lim [ctr]
Maintainer: Xiaodong Deng <xd_deng@hotmail.com>
Diff between ECharts2Shiny versions 0.2.12 dated 2017-08-19 and 0.2.13 dated 2017-12-11
DESCRIPTION | 14 ++++++++------ MD5 | 10 +++++----- NEWS | 5 +++++ R/word_cloud.R | 3 +++ README.md | 12 ++++++++++-- inst/doc/intro.html | 4 ++-- 6 files changed, 33 insertions(+), 15 deletions(-)
Title: Analysis of Symbolic Data
Description: Symbolic data analysis methods: importing/ exporting data from ASSO XML Files, distance calculation for symbolic data (Ichino-Yaguchi, de Carvalho measure), zoom star plot, 3d interval plot, multidimensional scaling for symbolic interval data, dynamic clustering based on distance matrix, HINoV method for symbolic data, Ichino's feature selection method, principal component analysis for symbolic interval data, decision trees for symbolic data based on optimal split with bagging, boosting and random forest approach (+visualization), kernel discriminant analysis for symbolic data, Kohonen's self-organizing maps for symbolic, replication and profiling, artificial symbolic data generation.
Author: Andrzej Dudek, Marcin Pelka <marcin.pelka@ue.wroc.pl>, Justyna Wilk<justyna.wilk@ue.wroc.pl>
Maintainer: Andrzej Dudek <andrzej.dudek@ue.wroc.pl>
Diff between symbolicDA versions 0.4-2 dated 2015-03-14 and 0.4-3 dated 2017-12-11
symbolicDA-0.4-2/symbolicDA/src |only symbolicDA-0.4-2/symbolicDA/tests/DClust.Rout |only symbolicDA-0.4-2/symbolicDA/tests/HINoV.SDA.Rout |only symbolicDA-0.4-2/symbolicDA/tests/SClust.Rout |only symbolicDA-0.4-2/symbolicDA/tests/cars.Rout |only symbolicDA-0.4-2/symbolicDA/tests/cluster.Description.SDA.Rout |only symbolicDA-0.4-2/symbolicDA/tests/dist.SDA.Rout |only symbolicDA-0.4-2/symbolicDA/tests/index.G1d.Rout |only symbolicDA-0.4-2/symbolicDA/tests/plot3dInterval.Rout |only symbolicDA-0.4-2/symbolicDA/tests/replication.SDA.Rout |only symbolicDA-0.4-2/symbolicDA/tests/save.SO.Rout |only symbolicDA-0.4-2/symbolicDA/tests/zoomStar.Rout |only symbolicDA-0.4-3/symbolicDA/DESCRIPTION | 12 symbolicDA-0.4-3/symbolicDA/MD5 | 69 symbolicDA-0.4-3/symbolicDA/NAMESPACE | 7 symbolicDA-0.4-3/symbolicDA/R/DClust.r | 4 symbolicDA-0.4-3/symbolicDA/R/decisionTree.SDA.r | 1265 +++++----- symbolicDA-0.4-3/symbolicDA/R/dist.SDA.r | 315 +- symbolicDA-0.4-3/symbolicDA/R/replication.SDA.r | 2 symbolicDA-0.4-3/symbolicDA/R/save.SO.r | 2 symbolicDA-0.4-3/symbolicDA/inst/doc/DClust_details.doc |only symbolicDA-0.4-3/symbolicDA/inst/doc/HINoVSDA_details.doc |only symbolicDA-0.4-3/symbolicDA/inst/doc/IchinoFSSDA_details.doc |only symbolicDA-0.4-3/symbolicDA/inst/doc/Pytania.doc |only symbolicDA-0.4-3/symbolicDA/inst/doc/SClust_details.doc |only symbolicDA-0.4-3/symbolicDA/inst/doc/indexG1d_details.doc |only symbolicDA-0.4-3/symbolicDA/inst/doc/jw_help.rar |only symbolicDA-0.4-3/symbolicDA/inst/doc/kohonenSDA_details.doc |only symbolicDA-0.4-3/symbolicDA/inst/doc/replicationSDA_details.doc |only symbolicDA-0.4-3/symbolicDA/tests/DClust.R | 2 symbolicDA-0.4-3/symbolicDA/tests/DClust.Rout.save |only symbolicDA-0.4-3/symbolicDA/tests/HINoV.SDA.R | 2 symbolicDA-0.4-3/symbolicDA/tests/HINoV.SDA.Rout.save |only symbolicDA-0.4-3/symbolicDA/tests/SClust.R | 2 symbolicDA-0.4-3/symbolicDA/tests/SClust.Rout.save |only symbolicDA-0.4-3/symbolicDA/tests/cars.R | 2 symbolicDA-0.4-3/symbolicDA/tests/cars.Rout.save |only symbolicDA-0.4-3/symbolicDA/tests/cluster.Description.SDA.R | 2 symbolicDA-0.4-3/symbolicDA/tests/cluster.Description.SDA.Rout.save |only symbolicDA-0.4-3/symbolicDA/tests/dist.SDA.R | 2 symbolicDA-0.4-3/symbolicDA/tests/dist.SDA.Rout.save |only symbolicDA-0.4-3/symbolicDA/tests/index.G1d.R | 2 symbolicDA-0.4-3/symbolicDA/tests/index.G1d.Rout.save |only symbolicDA-0.4-3/symbolicDA/tests/plot3dInterval.R | 5 symbolicDA-0.4-3/symbolicDA/tests/plot3dInterval.Rout.save |only symbolicDA-0.4-3/symbolicDA/tests/replication.SDA.R | 2 symbolicDA-0.4-3/symbolicDA/tests/replication.SDA.Rout.save |only symbolicDA-0.4-3/symbolicDA/tests/save.SO.R | 2 symbolicDA-0.4-3/symbolicDA/tests/save.SO.Rout.save |only symbolicDA-0.4-3/symbolicDA/tests/zoomStar.R | 4 symbolicDA-0.4-3/symbolicDA/tests/zoomStar.Rout.save |only 51 files changed, 862 insertions(+), 841 deletions(-)
More information about matrixsampling at CRAN
Permanent link
Title: Lexicons for Text Analysis
Description: A collection of lexical hash tables, dictionaries, and word lists.
Author: Tyler Rinker [aut, cre]
Maintainer: Tyler Rinker <tyler.rinker@gmail.com>
Diff between lexicon versions 0.4.1 dated 2017-10-29 and 0.6.3 dated 2017-12-11
DESCRIPTION | 27 ++--- MD5 | 161 +++++++++++++++++++----------- NEWS | 47 ++++++++ R/constraining_loughran_mcdonald.R |only R/hash_grady_pos.R | 2 R/hash_sentiment_emojis.R |only R/hash_sentiment_huliu.R | 2 R/hash_sentiment_inquirer.R |only R/hash_sentiment_jockers.R | 6 - R/hash_sentiment_jockers_rinker.R |only R/hash_sentiment_loughran_mcdonald.R |only R/hash_sentiment_senticnet.R |only R/hash_sentiment_sentiword.R | 2 R/hash_sentiment_vadar.R |only R/hash_valence_shifters.R | 15 ++ R/lexicon-package.R | 3 R/modal_loughran_mcdonald.R |only R/sw_jockers.R |only R/sw_loughran_mcdonald.R |only R/sw_lucene.R |only R/sw_mallet.R |only R/sw_python.R |only README.md | 150 +++++++++++++++++++++++---- data/common_names.rda |binary data/constraining_loughran_mcdonald.rda |only data/datalist | 17 +++ data/discourse_markers_alemany.rda |binary data/dodds_sentiment.rda |binary data/emojis_sentiment.rda |only data/freq_first_names.rda |binary data/freq_last_names.rda |binary data/function_words.rda |binary data/grady_augmented.rda |binary data/hash_emojis.rda |only data/hash_emojis_identifier.rda |only data/hash_emoticons.rda |binary data/hash_grady_pos.rda |binary data/hash_lemmas.rda |binary data/hash_power.rda |binary data/hash_sentiment_emojis.rda |only data/hash_sentiment_huliu.rda |binary data/hash_sentiment_inquirer.rda |only data/hash_sentiment_jockers_rinker.rda |only data/hash_sentiment_loughran_mcdonald.rda |only data/hash_sentiment_nrc.rda |binary data/hash_sentiment_senticnet.rda |only data/hash_sentiment_sentiword.rda |binary data/hash_sentiment_vadar.rda |only data/hash_strength.rda |binary data/hash_syllable.rda |binary data/hash_valence_shifters.rda |binary data/key_abbreviation.rda |binary data/key_contractions.rda |binary data/key_grade.rda |binary data/key_rating.rda |binary data/modal_loughran_mcdonald.rda |only data/nrc_emotions.rda |binary data/pos_action_verb.rda |binary data/pos_adverb.rda |binary data/pos_df_irregular_nouns.rda |binary data/pos_df_pronouns.rda |binary data/pos_interjections.rda |binary data/pos_preposition.rda |binary data/pos_unchanging_nouns.rda |binary data/profanity_alvarez.rda |binary data/profanity_arr_bad.rda |binary data/profanity_banned.rda |binary data/profanity_google.rda |binary data/profanity_von_ahn.rda |binary data/sw_buckley_salton.rda |binary data/sw_dolch.rda |binary data/sw_fry_100.rda |binary data/sw_fry_1000.rda |binary data/sw_fry_200.rda |binary data/sw_fry_25.rda |binary data/sw_jockers.rda |only data/sw_loughran_mcdonald_long.rda |only data/sw_loughran_mcdonald_short.rda |only data/sw_lucene.rda |only data/sw_mallet.rda |only data/sw_onix.rda |binary data/sw_python.rda |only inst/CITATION | 5 man/constraining_loughran_mcdonald.Rd |only man/emojis_sentiment.Rd |only man/hash_emojis.Rd |only man/hash_emojis_identifier.Rd |only man/hash_grady_pos.Rd | 2 man/hash_sentiment_emojis.Rd |only man/hash_sentiment_huliu.Rd | 2 man/hash_sentiment_inquirer.Rd |only man/hash_sentiment_jockers.Rd | 4 man/hash_sentiment_jockers_rinker.Rd |only man/hash_sentiment_loughran_mcdonald.Rd |only man/hash_sentiment_senticnet.Rd |only man/hash_sentiment_sentiword.Rd | 2 man/hash_sentiment_vadar.Rd |only man/hash_valence_shifters.Rd | 2 man/modal_loughran_mcdonald.Rd |only man/sw_jockers.Rd |only man/sw_loughran_mcdonald_long.Rd |only man/sw_loughran_mcdonald_short.Rd |only man/sw_lucene.Rd |only man/sw_mallet.Rd |only man/sw_python.Rd |only 105 files changed, 342 insertions(+), 107 deletions(-)
Title: Template Model Builder: A General Random Effect Tool Inspired by
'ADMB'
Description: With this tool, a user should be able to quickly implement complex
random effect models through simple C++ templates. The package combines
'CppAD' (C++ automatic differentiation), 'Eigen' (templated matrix-vector
library) and 'CHOLMOD' (sparse matrix routines available from R) to obtain an
efficient implementation of the applied Laplace approximation with exact
derivatives. Key features are: Automatic sparseness detection, parallelism
through 'BLAS' and parallel user templates.
Author: Kasper Kristensen [aut, cre, cph],
Brad Bell [cph],
Hans Skaug [ctb],
Arni Magnusson [ctb],
Casper Berg [ctb],
Anders Nielsen [ctb],
Martin Maechler [ctb],
Theo Michelot [ctb],
Mollie Brooks [ctb],
Alex Forrence [ctb],
Christoffer Moesgaard Albertsen [ctb],
Cole Monnahan [ctb]
Maintainer: Kasper Kristensen <kaskr@dtu.dk>
Diff between TMB versions 1.7.11 dated 2017-08-09 and 1.7.12 dated 2017-12-11
DESCRIPTION | 8 MD5 | 61 ++-- NAMESPACE | 2 NEWS | 22 + R/TMB.R | 13 R/setupRStudio.R |only R/tmbprofile.R | 2 R/validation.R | 158 ++++++++++ R/zzz.R | 2 inst/include/TMB.hpp | 3 inst/include/atomic_macro.hpp | 8 inst/include/atomic_math.hpp | 16 - inst/include/checkpoint_macro.hpp | 4 inst/include/config.hpp | 6 inst/include/convenience.hpp | 2 inst/include/convert.hpp | 61 +--- inst/include/cppad/local/forward0sweep.hpp | 32 +- inst/include/expm.hpp | 2 inst/include/tiny_ad/bessel/bessel.hpp | 1 inst/include/tiny_ad/beta/pbeta.hpp | 1 inst/include/tiny_ad/beta/toms708.cpp | 9 inst/include/tiny_ad/compois/compois.hpp | 8 inst/include/tiny_ad/gamma/gamma.hpp | 1 inst/include/tiny_ad/mask.hpp | 2 inst/include/tiny_ad/tiny_ad/tiny_ad.hpp | 18 + inst/include/tmb_core.hpp | 424 +++++++++++++++++------------ inst/include/tmbutils/array.hpp | 4 inst/include/tmbutils/spmat.hpp | 10 inst/include/tmbutils/tmbutils.hpp | 4 inst/template.cpp | 13 man/compile.Rd | 4 man/oneStepPredict.Rd | 4 32 files changed, 597 insertions(+), 308 deletions(-)
Title: Computes Revisitation Metrics for Trajectory Data
Description: Computes revisitation metrics for trajectory data, such as the number of revisitations for each location as well as the time spent for that visit and the time since the previous visit. Also includes functions to plot data.
Author: Chloe Bracis <cbracis@uw.edu>
Maintainer: Chloe Bracis <cbracis@uw.edu>
Diff between recurse versions 1.0.0 dated 2017-12-07 and 1.0.1 dated 2017-12-11
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- R/calculateIntervalResidenceTime.R | 17 ++++++++++------- inst/doc/recurse.html | 14 +++++++------- src/RecurseCalculator.cpp | 4 ++-- tests/testthat/test_recurse.R | 14 ++++++++++++++ 6 files changed, 42 insertions(+), 25 deletions(-)
Title: Generalised Additive Models for Location Scale and Shape
Description: Functions for fitting the Generalized Additive Models for Location Scale and Shape introduced by Rigby and Stasinopoulos (2005), <doi:10.1111/j.1467-9876.2005.00510.x>. The models use a distributional regression approach where all the parameters of the conditional distribution of the response variable are modelled using explanatory variables.
Author: Mikis Stasinopoulos [aut, cre, cph],
Bob Rigby [aut],
Vlasios Voudouris [ctb],
Calliope Akantziliotou [ctb],
Marco Enea [ctb],
Daniil Kiose [ctb]
Maintainer: Mikis Stasinopoulos <mikis.stasinopoulos@gamlss.org>
Diff between gamlss versions 5.0-5 dated 2017-11-12 and 5.0-6 dated 2017-12-11
DESCRIPTION | 8 +++--- MD5 | 12 ++++----- R/edf.R | 65 +++++++++++++++++++++++++++++------------------------- R/getPEF.R | 3 +- R/pb.R | 4 +-- R/pbo_original.R | 1 inst/doc/NEWS.txt | 7 +++++ 7 files changed, 56 insertions(+), 44 deletions(-)
Title: Tools for the Analysis of Epidemiological Data
Description: Tools for the analysis of epidemiological data. Contains functions for directly and indirectly adjusting measures of disease frequency, quantifying measures of association on the basis of single or multiple strata of count data presented in a contingency table, and computing confidence intervals around incidence risk and incidence rate estimates. Miscellaneous functions for use in meta-analysis, diagnostic test interpretation, and sample size calculations.
Author: Mark Stevenson <mark.stevenson1@unimelb.edu.au> with contributions from Telmo Nunes, Cord Heuer, Jonathon Marshall, Javier Sanchez, Ron Thornton, Jeno Reiczigel, Jim Robison-Cox, Paola Sebastiani, Peter Solymos, Kazuki Yoshida, Geoff Jones, Sarah Pirikahu, Simon Firestone, Ryan Kyle, Johann Popp and Mathew Jay.
Maintainer: Mark Stevenson <mark.stevenson1@unimelb.edu.au>
Diff between epiR versions 0.9-91 dated 2017-10-27 and 0.9-93 dated 2017-12-11
DESCRIPTION | 10 ++-- MD5 | 12 ++--- NAMESPACE | 2 R/epi.cp.R | 15 ++++++- R/epi.directadj.R | 44 ++++++++++---------- man/epi.cp.Rd | 6 +- man/epi.directadj.Rd | 108 +++++++++++++++++++++++++++++++++++++++++++++++---- 7 files changed, 152 insertions(+), 45 deletions(-)
Title: Tools for Descriptive Statistics
Description: A collection of miscellaneous basic statistic functions and convenience wrappers for efficiently describing data. The author's intention was to create a toolbox, which facilitates the (notoriously time consuming) first descriptive tasks in data analysis, consisting of calculating descriptive statistics, drawing graphical summaries and reporting the results. The package contains furthermore functions to produce documents using MS Word (or PowerPoint) and functions to import data from Excel. Many of the included functions can be found scattered in other packages and other sources written partly by Titans of R. The reason for collecting them here, was primarily to have them consolidated in ONE instead of dozens of packages (which themselves might depend on other packages which are not needed at all), and to provide a common and consistent interface as far as function and arguments naming, NA handling, recycling rules etc. are concerned. Google style guides were used as naming rules (in absence of convincing alternatives). The 'camel style' was consequently applied to functions borrowed from contributed R packages as well.
Author: Andri Signorell. Includes R source code and/or documentation previously published by (in alphabetical order): Ken Aho, Andreas Alfons, Nanina Anderegg, Tomas Aragon, Antti Arppe, Adrian Baddeley, Kamil Barton, Ben Bolker, Frederico Caeiro, Stephane Champely, Daniel Chessel, Leanne Chhay, Clint Cummins, Michael Dewey, Harold C. Doran, Stephane Dray, Charles Dupont, Dirk Eddelbuettel, Jeff Enos, Claus Ekstrom, Martin Elff, Kamil Erguler, Richard W. Farebrother, John Fox, Romain Francois, Michael Friendly, Tal Galili, Matthias Gamer, Joseph L. Gastwirth, Yulia R. Gel, Juergen Gross, Gabor Grothendieck, Frank E. Harrell Jr, Richard Heiberger, Michael Hoehle, Christian W. Hoffmann, Torsten Hothorn, Markus Huerzeler, Wallace W. Hui, Pete Hurd, Rob J. Hyndman, Pablo J. Villacorta Iglesias, Matthias Kohl, Mikko Korpela, Max Kuhn, Detlew Labes, Friederich Leisch, Jim Lemon, Dong Li, Martin Maechler, Arni Magnusson, Daniel Malter, George Marsaglia, John Marsaglia, Alina Matei, David Meyer, Weiwen Miao, Giovanni Millo, Yongyi Min, David Mitchell, Markus Naepflin, Daniel Navarro, Henric Nilsson, Klaus Nordhausen, Derek Ogle, Hong Ooi, Nick Parsons, Sandrine Pavoine, Tony Plate, Roland Rapold, William Revelle, Tyler Rinker, Brian D. Ripley, Caroline Rodriguez, Nathan Russell, Nick Sabbe, Venkatraman E. Seshan, Greg Snow, Michael Smithson, Werner A. Stahel, Mark Stevenson, Matthias Templ, Terry Therneau, Yves Tille, Adrian Trapletti, Kevin Ushey, Jeremy VanDerWal, Bill Venables, John Verzani, Gregory R. Warnes, Stefan Wellek, Hadley Wickham, Rand R. Wilcox, Peter Wolf, Daniel Wollschlaeger, Thomas Yee, Achim Zeileis
Maintainer: Andri Signorell <andri@signorell.net>
Diff between DescTools versions 0.99.22 dated 2017-09-13 and 0.99.23 dated 2017-12-11
DescTools-0.99.22/DescTools/man/ChooseColorDlg.Rd |only DescTools-0.99.22/DescTools/man/FixToTab.Rd |only DescTools-0.99.22/DescTools/man/HWZdata.Rd |only DescTools-0.99.23/DescTools/DESCRIPTION | 8 DescTools-0.99.23/DescTools/MD5 | 93 +-- DescTools-0.99.23/DescTools/NAMESPACE | 15 DescTools-0.99.23/DescTools/NEWS | 42 + DescTools-0.99.23/DescTools/R/Desc.R | 3 DescTools-0.99.23/DescTools/R/DescTools.r | 456 ++++++++++----- DescTools-0.99.23/DescTools/R/LinMod.R | 9 DescTools-0.99.23/DescTools/R/StatsAndCIs.r | 128 ++-- DescTools-0.99.23/DescTools/R/Tests.r | 345 +++-------- DescTools-0.99.23/DescTools/data/hblue.rda |binary DescTools-0.99.23/DescTools/data/hecru.rda |binary DescTools-0.99.23/DescTools/data/hgreen.rda |binary DescTools-0.99.23/DescTools/data/horange.rda |binary DescTools-0.99.23/DescTools/data/hred.rda |binary DescTools-0.99.23/DescTools/data/hyellow.rda |binary DescTools-0.99.23/DescTools/man/BinomCI.Rd | 24 DescTools-0.99.23/DescTools/man/ColPicker.Rd | 5 DescTools-0.99.23/DescTools/man/ColorDlg.Rd |only DescTools-0.99.23/DescTools/man/ColorLegend.Rd | 46 - DescTools-0.99.23/DescTools/man/Conf.Rd | 8 DescTools-0.99.23/DescTools/man/Cor.Rd | 18 DescTools-0.99.23/DescTools/man/CourseData.Rd |only DescTools-0.99.23/DescTools/man/DatasetsforSimulation.Rd | 4 DescTools-0.99.23/DescTools/man/DenseRank.Rd | 5 DescTools-0.99.23/DescTools/man/Desc.Rd | 10 DescTools-0.99.23/DescTools/man/DescTools-package.Rd | 15 DescTools-0.99.23/DescTools/man/DescToolsOptions.Rd | 2 DescTools-0.99.23/DescTools/man/DigitSum.Rd | 5 DescTools-0.99.23/DescTools/man/FixToTable.Rd |only DescTools-0.99.23/DescTools/man/Mode.Rd | 2 DescTools-0.99.23/DescTools/man/PlotBag.Rd | 7 DescTools-0.99.23/DescTools/man/PlotBubble.Rd | 6 DescTools-0.99.23/DescTools/man/PlotMultiDens.Rd | 12 DescTools-0.99.23/DescTools/man/PlotPyramid.Rd | 3 DescTools-0.99.23/DescTools/man/Range.Rd | 2 DescTools-0.99.23/DescTools/man/Rev.Rd | 20 DescTools-0.99.23/DescTools/man/SD.Rd | 7 DescTools-0.99.23/DescTools/man/Shade.Rd | 9 DescTools-0.99.23/DescTools/man/SortMixed.Rd | 97 ++- DescTools-0.99.23/DescTools/man/Str.Rd | 8 DescTools-0.99.23/DescTools/man/StrChop.Rd | 8 DescTools-0.99.23/DescTools/man/TTestA.Rd |only DescTools-0.99.23/DescTools/man/Trim.Rd | 5 DescTools-0.99.23/DescTools/man/ZTest.Rd | 7 DescTools-0.99.23/DescTools/man/ZeroIfNA.Rd | 4 DescTools-0.99.23/DescTools/man/d.pizza.Rd | 6 DescTools-0.99.23/DescTools/man/day.name.Rd | 2 DescTools-0.99.23/DescTools/src/init.c | 73 +- 51 files changed, 861 insertions(+), 658 deletions(-)
Title: Functions from "Reinsurance: Actuarial and Statistical Aspects"
Description: Functions from the book "Reinsurance: Actuarial and Statistical Aspects" (2017) by Hansjoerg Albrecher, Jan Beirlant and Jef Teugels <http://www.wiley.com/WileyCDA/WileyTitle/productCd-0470772689.html>.
Author: Tom Reynkens [aut, cre],
Roel Verbelen [aut] (R code for Mixed Erlang distribution),
Anastasios Bardoutsos [ctb] (Original R code for cEPD estimator),
Dries Cornilly [ctb] (Original R code for EVT estimators for truncated
data),
Yuri Goegebeur [ctb] (Original S-Plus code for basic EVT estimators),
Klaus Herrmann [ctb] (Original R code for GPD estimator)
Maintainer: Tom Reynkens <tomreynkens@hotmail.com>
Diff between ReIns versions 1.0.5 dated 2017-09-07 and 1.0.6 dated 2017-12-11
DESCRIPTION | 10 +++---- MD5 | 44 +++++++++++++++++----------------- build/vignette.rds |binary inst/NEWS.Rd | 15 +++++++++++ inst/doc/ReIns.html | 60 +++++++++++++++++++++++------------------------ man/CTE.Rd | 2 - man/EVTfit.Rd | 2 - man/ExcessSplice.Rd | 2 - man/MEfit.Rd | 2 - man/Splice.Rd | 2 - man/SpliceECDF.Rd | 2 - man/SpliceFit.Rd | 2 - man/SpliceFitGPD.Rd | 2 - man/SpliceFitPareto.Rd | 2 - man/SpliceFiticPareto.Rd | 2 - man/SpliceLL.Rd | 2 - man/SpliceLL_TB.Rd | 2 - man/SplicePP.Rd | 2 - man/SplicePP_TB.Rd | 2 - man/SpliceQQ.Rd | 2 - man/SpliceQQ_TB.Rd | 2 - man/SpliceTB.Rd | 2 - man/VaR.Rd | 2 - 23 files changed, 90 insertions(+), 75 deletions(-)
Title: Graph Based Multiple Comparison Procedures
Description: Functions and a graphical user interface for graphical described
multiple test procedures.
Author: Kornelius Rohmeyer [aut, cre],
Florian Klinglmueller [aut]
Maintainer: Kornelius Rohmeyer <rohmeyer@small-projects.de>
Diff between gMCP versions 0.8-12 dated 2017-12-04 and 0.8-13 dated 2017-12-11
DESCRIPTION | 8 +-- INSTALL | 2 MD5 | 88 +++++++++++++++++------------------ NEWS | 22 ++++++++ R/doRUnitTests.R | 8 +-- R/misc.R | 2 inst/doc/AQuickStart.pdf |binary inst/doc/gMCP.pdf |binary inst/doc/parametric.pdf |binary man/bdiagNA.Rd | 7 +- man/bonferroni.test.Rd | 1 man/bonferroni.trimmed.simes.test.Rd | 1 man/calcPower.Rd | 1 man/corMatWizard.Rd | 1 man/doInterim.Rd | 7 +- man/extractPower.Rd | 1 man/gMCP.Rd | 7 +- man/gMCP.extended.Rd | 7 +- man/gMCPReport.Rd | 7 +- man/generateBounds.Rd | 7 +- man/generatePvals.Rd | 7 +- man/generateTest.Rd | 7 +- man/generateWeights.Rd | 7 +- man/getJavaInfo.Rd | 3 - man/graph2latex.Rd | 7 +- man/graphAnalysis.Rd | 7 +- man/graphGUI.Rd | 1 man/graphTest.Rd | 1 man/joinGraphs.Rd | 7 +- man/parametric.test.Rd | 1 man/placeNodes.Rd | 7 +- man/plotSimCI.Rd | 1 man/rejectNode.Rd | 7 +- man/replaceVariables.Rd | 7 +- man/rqmvnorm.Rd | 11 +--- man/sampSize.Rd | 1 man/sampSizeCore.Rd | 1 man/secondStageTest.Rd | 7 +- man/simes.on.subsets.test.Rd | 1 man/simes.test.Rd | 1 man/subgraph.Rd | 7 +- man/substituteEps.Rd | 7 +- man/unitTestsGMCP.Rd | 4 - man/weighted.test.functions.Rd | 1 tests/doRUnit.R | 10 +-- 45 files changed, 142 insertions(+), 156 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-12-10 1.2.2
Title: Minimax and Minimax Projection Designs
Description: Provides two main functions: mMcPSO() and
miniMaxPro(), which generates minimax designs and minimax projection designs using
a hybrid clustering - particle swarm optimization (PSO) algorithm. These designs can be used
in a variety of settings, e.g., as space-filling designs for computer experiments or
sensor allocation designs. A detailed description of the two designs and the employed
algorithms can be found in Mak and Joseph (2017) <DOI:10.1080/10618600.2017.1302881>.
Author: Simon Mak
Maintainer: Simon Mak <smak6@gatech.edu>
Diff between minimaxdesign versions 0.1.2 dated 2017-05-03 and 0.1.3 dated 2017-12-11
DESCRIPTION | 8 +-- MD5 | 22 +++++---- NAMESPACE | 5 -- R/RcppExports.R | 24 +++++----- R/minimax.R | 103 +++++++++++++++++++++++++++++++++++-------- inst |only man/mMcPSO.Rd | 31 +++++------- man/mMcPSO_map.Rd |only man/miniMaxPro.Rd | 5 -- man/minimaxdesign-package.Rd | 4 - src/RcppExports.cpp | 32 +++++++++---- src/init.c | 36 ++++++++++++++- src/subfunc.cpp | 30 ++++++++++++ 13 files changed, 221 insertions(+), 79 deletions(-)
Title: Time Series Forecasting with Neural Networks
Description: Contains functions to facilitate automatic time series modelling with neural networks.
Allows fully automatic, semi-manual or fully manual specification of networks. For details of the
specification methodology see: (i) Crone and Kourentzes (2010) <doi:10.1016/j.neucom.2010.01.017>;
and (ii) Kourentzes et al. (2014) <doi:10.1016/j.eswa.2013.12.011>.
Author: Nikolaos Kourentzes [aut, cre]
Maintainer: Nikolaos Kourentzes <nikolaos@kourentzes.com>
Diff between nnfor versions 0.9 dated 2017-10-24 and 0.9.2 dated 2017-12-11
DESCRIPTION | 7 + MD5 | 16 ++-- NEWS.md |only R/elm.R | 195 ++++++++++++++++++++++++++++++++++++--------------- R/mlp.R | 83 +++++++++++++++++---- R/mseastest.R | 38 ++++----- README.md |only man/elm.Rd | 6 + man/mlp.Rd | 9 +- man/nnfor-package.Rd | 1 10 files changed, 249 insertions(+), 106 deletions(-)
Title: Interface to the Knoema API
Description: Using this package, users can access to the largest collection of public data and statistics on the Internet featuring about 2.5 billion time series from thousands of sources collected in 'Knoema' repository and use rich R calculations in order to analyze the data. Because data in 'Knoema' is time series data, 'Knoema' function offers data in a number of formats usable in R such as 'ts', 'xts' or 'zoo'. For more information about 'Knoema' API go to <https://knoema.com/dev/docs>.
Author: Pavel Pimenov [aut, cre],
Ekaterina Chirkova [aut],
Knoema [cph]
Maintainer: Pavel Pimenov <pimenov@knoema.com>
Diff between Knoema versions 0.1.9 dated 2017-10-03 and 0.1.12 dated 2017-12-11
DESCRIPTION | 8 LICENSE | 4 MD5 | 28 NAMESPACE | 1 R/ApiClient.R | 51 - R/ApiDefinitions.R | 92 +- R/DataReader.R | 1294 +++++++++++++++++++++++------- R/knoema.R | 65 + README.md | 31 man/Knoema.Rd | 17 tests/testthat/test_dataframe.R | 98 +- tests/testthat/test_errors.R | 47 - tests/testthat/test_flat_dataset.R |only tests/testthat/test_search_by_mnemonics.R |only tests/testthat/test_ts.R | 171 ++- tests/testthat/test_xts_zoo.R | 186 ++-- 16 files changed, 1508 insertions(+), 585 deletions(-)
Title: Testing 'DBI' Back Ends
Description: A helper that tests 'DBI' back ends for conformity
to the interface.
Author: Kirill Müller [aut, cre],
RStudio [cph]
Maintainer: Kirill Müller <krlmlr+r@mailbox.org>
Diff between DBItest versions 1.5 dated 2017-06-19 and 1.5-1 dated 2017-12-11
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ NEWS.md | 5 +++++ R/spec-connection-disconnect.R | 10 +++------- build/vignette.rds |binary inst/doc/test.html | 26 +++++++++++++------------- man/spec_connection_disconnect.Rd | 3 ++- 7 files changed, 33 insertions(+), 31 deletions(-)