Title: Interface to the Lake Multi-Scaled Geospatial and Temporal
Database
Description: Client for programmatic access to the Lake
Multi-scaled Geospatial and Temporal database <https://lagoslakes.org>, with functions
for accessing lake water quality and ecological context data for the US.
Author: Joseph Stachelek [aut, cre] (0000-0002-5924-2464),
Samantha Oliver [aut] (0000-0001-5668-1165),
Farzan Masrour [aut]
Maintainer: Joseph Stachelek <stachel2@msu.edu>
Diff between LAGOSNE versions 1.0.0 dated 2017-10-18 and 1.1.0 dated 2017-12-12
LAGOSNE-1.0.0/LAGOSNE/vignettes/lagosne_structure.Rmd |only LAGOSNE-1.0.0/LAGOSNE/vignettes/working_with_lagosne.Rmd |only LAGOSNE-1.1.0/LAGOSNE/DESCRIPTION | 6 - LAGOSNE-1.1.0/LAGOSNE/MD5 | 42 ++++++------- LAGOSNE-1.1.0/LAGOSNE/NEWS.md | 10 +++ LAGOSNE-1.1.0/LAGOSNE/R/LAGOSNE-package.R | 8 +- LAGOSNE-1.1.0/LAGOSNE/R/get.R | 29 +++++--- LAGOSNE-1.1.0/LAGOSNE/R/load.R | 16 ++++ LAGOSNE-1.1.0/LAGOSNE/R/utils.R | 6 - LAGOSNE-1.1.0/LAGOSNE/R/zzz.R | 5 - LAGOSNE-1.1.0/LAGOSNE/README.md | 17 +---- LAGOSNE-1.1.0/LAGOSNE/build/vignette.rds |binary LAGOSNE-1.1.0/LAGOSNE/inst/CITATION | 6 - LAGOSNE-1.1.0/LAGOSNE/inst/doc/lagosne_structure.html | 18 +++-- LAGOSNE-1.1.0/LAGOSNE/inst/doc/working_with_lagosne.html | 35 ++++------ LAGOSNE-1.1.0/LAGOSNE/man/chag.Rd | 1 LAGOSNE-1.1.0/LAGOSNE/man/lagos_load_oliver_2015.Rd | 16 ++++ LAGOSNE-1.1.0/LAGOSNE/man/lagoslakes.Rd | 2 LAGOSNE-1.1.0/LAGOSNE/man/lulc.Rd | 4 - LAGOSNE-1.1.0/LAGOSNE/man/source.Rd | 1 LAGOSNE-1.1.0/LAGOSNE/tests/testthat/lagos_test_subset.rds |binary LAGOSNE-1.1.0/LAGOSNE/tests/testthat/test-lagos_load.R | 2 LAGOSNE-1.1.0/LAGOSNE/tests/testthat/test-lagos_select.R | 18 ++--- 23 files changed, 139 insertions(+), 103 deletions(-)
Title: Methods to Convert R Data to YAML and Back
Description: Implements the 'libyaml' 'YAML' 1.1 parser and emitter (<http://pyyaml.org/wiki/LibYAML>) for R.
Author: Jeremy Stephens <jeremy.stephens@vanderbilt.edu>
Maintainer: Jeremy Stephens <jeremy.stephens@vanderbilt.edu>
Diff between yaml versions 2.1.15 dated 2017-12-01 and 2.1.16 dated 2017-12-12
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- inst/CHANGELOG | 3 +++ src/r_parse.c | 2 ++ 4 files changed, 12 insertions(+), 7 deletions(-)
Title: Spatially Explicit Capture-Recapture for Linear Habitats
Description: Tools for spatially explicit capture-recapture analysis of animal populations in linear habitats, extending package 'secr'.
Author: Murray Efford
Maintainer: Murray Efford <murray.efford@otago.ac.nz>
Diff between secrlinear versions 1.1.0 dated 2017-05-03 and 1.1.1 dated 2017-12-12
DESCRIPTION | 10 +- MD5 | 32 +++---- NEWS | 6 + build/vignette.rds |binary inst/doc/secrlinear-manual.pdf |binary inst/doc/secrlinear-vignette.R | 117 ++++++++++++------------- inst/doc/secrlinear-vignette.Rmd | 173 ++++++++++++++++++-------------------- inst/doc/secrlinear-vignette.pdf |binary man/Silverstream.Rd | 5 - man/edges.Rd | 5 - man/make.line.Rd | 2 man/rbind.linearmask.Rd | 2 man/read.linearmask.Rd | 2 man/secrlinear-package.Rd | 16 +-- man/showpath.Rd | 2 man/utility.Rd | 2 vignettes/secrlinear-vignette.Rmd | 173 ++++++++++++++++++-------------------- 17 files changed, 266 insertions(+), 281 deletions(-)
Title: Pretty Print R Code in the Terminal
Description: Replace the standard print method for functions with one that
performs syntax highlighting, using ANSI colors, if the terminal
supports them.
Author: Gábor Csárdi
Maintainer: Gábor Csárdi <csardi.gabor@gmail.com>
Diff between prettycode versions 1.0.0 dated 2017-01-27 and 1.0.1 dated 2017-12-12
prettycode-1.0.0/prettycode/README.md |only prettycode-1.0.1/prettycode/DESCRIPTION | 12 ++++++------ prettycode-1.0.1/prettycode/MD5 | 10 +++++----- prettycode-1.0.1/prettycode/NAMESPACE | 2 -- prettycode-1.0.1/prettycode/NEWS.md | 5 +++++ prettycode-1.0.1/prettycode/R/print.R | 17 ++++++++++++++++- prettycode-1.0.1/prettycode/inst/README.markdown |only 7 files changed, 32 insertions(+), 14 deletions(-)
Title: Normalize NanoString miRNA and mRNA Data
Description: A set of tools for normalizing, diagnostics and visualization of NanoString nCounter data.
Author: Daryl M. Waggott
Maintainer: Paul Boutros <Paul.Boutros@oicr.on.ca>
Diff between NanoStringNorm versions 1.2.0 dated 2017-11-10 and 1.2.1 dated 2017-12-12
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/read.markup.RCC.R | 4 ++++ inst/doc/NanoStringNorm_Introduction.pdf |binary 4 files changed, 11 insertions(+), 7 deletions(-)
More information about NanoStringNorm at CRAN
Permanent link
Title: A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses
Description: A set of wrappers around 'rjags' functions to run Bayesian analyses in 'JAGS' (specifically, via 'libjags'). A single function call can control adaptive, burn-in, and sampling MCMC phases, with MCMC chains run in sequence or in parallel. Posterior distributions are automatically summarized (with the ability to exclude some monitored nodes if desired) and functions are available to generate figures based on the posteriors (e.g., predictive check plots, traceplots). Function inputs, argument syntax, and output format are nearly identical to the 'R2WinBUGS'/'R2OpenBUGS' packages to allow easy switching between MCMC samplers.
Author: Ken Kellner <contact@kenkellner.com>
Maintainer: Ken Kellner <contact@kenkellner.com>
Diff between jagsUI versions 1.4.8 dated 2017-11-17 and 1.4.9 dated 2017-12-12
DESCRIPTION | 9 +++++---- MD5 | 14 +++++++------- NEWS | 10 +++++++++- R/autojags.R | 4 ++-- R/jags.R | 4 ++-- R/print.R | 4 ++-- R/summary.R | 4 ++-- R/update.R | 6 +++--- 8 files changed, 32 insertions(+), 23 deletions(-)
Title: High-Performance Stemmer, Tokenizer, and Spell Checker for R
Description: A spell checker and morphological analyzer library designed for
languages with rich morphology and complex word compounding or character
encoding. The package can check and analyze individual words as well as
search for incorrect words within a text, latex, html or xml document. Use
the 'devtools' package to spell check R documentation with 'hunspell'.
Author: Jeroen Ooms
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between hunspell versions 2.7 dated 2017-11-03 and 2.8 dated 2017-12-12
DESCRIPTION | 9 ++-- MD5 | 14 +++--- NAMESPACE | 2 NEWS | 5 ++ R/hunspell.R | 23 ++++++---- build/vignette.rds |binary inst/doc/intro.html | 112 ++++++++++++++++++++++++---------------------------- man/hunspell.Rd | 8 +-- 8 files changed, 87 insertions(+), 86 deletions(-)
Title: Provides Foreach Looping Construct for R
Description: Support for the foreach looping construct. Foreach is an
idiom that allows for iterating over elements in a collection,
without the use of an explicit loop counter. This package in
particular is intended to be used for its return value, rather
than for its side effects. In that sense, it is similar to the
standard lapply function, but doesn't require the evaluation
of a function. Using foreach without side effects also
facilitates executing the loop in parallel.
Author: Rich Calaway [cre],
Microsoft [aut, cph],
Steve Weston [aut]
Maintainer: Rich Calaway <richcala@microsoft.com>
Diff between foreach versions 1.4.3 dated 2015-10-13 and 1.4.4 dated 2017-12-12
foreach-1.4.3/foreach/R/zzz.R |only foreach-1.4.4/foreach/DESCRIPTION | 14 +++++++------- foreach-1.4.4/foreach/MD5 | 27 +++++++++++++-------------- foreach-1.4.4/foreach/NAMESPACE | 2 +- foreach-1.4.4/foreach/NEWS | 14 ++++++++++++++ foreach-1.4.4/foreach/R/acc.R | 4 ++-- foreach-1.4.4/foreach/R/do.R | 2 +- foreach-1.4.4/foreach/R/foreach.R | 2 +- foreach-1.4.4/foreach/R/getsyms.R | 2 +- foreach-1.4.4/foreach/R/times.R | 2 +- foreach-1.4.4/foreach/build/vignette.rds |binary foreach-1.4.4/foreach/inst/doc/foreach.pdf |binary foreach-1.4.4/foreach/inst/doc/nested.pdf |binary foreach-1.4.4/foreach/man/foreach.Rd | 15 +++++++++++---- foreach-1.4.4/foreach/tests/doRUnit.R | 2 +- 15 files changed, 53 insertions(+), 33 deletions(-)
Title: Enhanced Foreign Function Interface Supporting Long Vectors
Description: An alternative version of .C() and .Fortran() supporting long
vectors and 64-bit integer type arguments. The provided interface .C64()
features mechanisms the avoid unnecessary copies of read-only or write-only
arguments. This makes it a convenient and fast interface to C/C++ and Fortran
code.
Author: Kaspar Moesinger [aut],
Florian Gerber [cre, ctb],
Reinhard Furrer [ctb]
Maintainer: Florian Gerber <florian.gerber@math.uzh.ch>
Diff between dotCall64 versions 0.9-04 dated 2016-10-07 and 0.9-5 dated 2017-12-12
DESCRIPTION | 26 +++++++----- MD5 | 19 ++++---- NAMESPACE | 4 - NEWS.md | 13 +++++- R/dotCall64.R | 19 ++++---- inst/CITATION | 41 ++++++++----------- inst/include/dotCall64.h | 15 ++----- man/dotCall64.Rd | 28 ++++++------- man/vector_dc.Rd | 7 +-- src/dotCall64.c | 100 ++++++++++++++++++++++------------------------- src/init.c |only 11 files changed, 140 insertions(+), 132 deletions(-)
Title: Diverse Cluster Ensemble in R
Description: Performs cluster analysis using an ensemble clustering framework.
Results from a diverse set of algorithms are pooled together using methods
such as majority voting, K-Modes, LinkCluE, and CSPA. There are options to
compare cluster assignments across algorithms using internal and external
indices, visualizations such as heatmaps, and significance testing for the
existence of clusters.
Author: Derek Chiu [aut, cre],
Aline Talhouk [aut],
Johnson Liu [ctb, com]
Maintainer: Derek Chiu <dchiu@bccrc.ca>
Diff between diceR versions 0.3.0 dated 2017-11-29 and 0.3.1 dated 2017-12-12
diceR-0.3.0/diceR/src/Makevars |only diceR-0.3.1/diceR/DESCRIPTION | 10 +++--- diceR-0.3.1/diceR/MD5 | 25 +++++++-------- diceR-0.3.1/diceR/NEWS.md | 8 ++++ diceR-0.3.1/diceR/R/algorithms.R | 6 ++- diceR-0.3.1/diceR/R/consensus_evaluate.R | 5 +-- diceR-0.3.1/diceR/R/dice.R | 13 ++----- diceR-0.3.1/diceR/R/graphs.R | 41 ++++++++++++++++++++----- diceR-0.3.1/diceR/R/utils.R | 12 +++++++ diceR-0.3.1/diceR/README.md | 14 ++++---- diceR-0.3.1/diceR/build/vignette.rds |binary diceR-0.3.1/diceR/inst/doc/overview.html | 2 - diceR-0.3.1/diceR/man/graphs.Rd | 2 - diceR-0.3.1/diceR/tests/testthat/test-graphs.R | 11 ++++++ 14 files changed, 102 insertions(+), 47 deletions(-)
Title: A Modern and Flexible Web Client for R
Description: The curl() and curl_download() functions provide highly
configurable drop-in replacements for base url() and download.file() with
better performance, support for encryption (https, ftps), gzip compression,
authentication, and other 'libcurl' goodies. The core of the package implements a
framework for performing fully customized requests where data can be processed
either in memory, on disk, or streaming via the callback or connection
interfaces. Some knowledge of 'libcurl' is recommended; for a more-user-friendly
web client see the 'httr' package which builds on this package with http
specific tools and logic.
Author: Jeroen Ooms [cre, aut],
Hadley Wickham [ctb],
RStudio [cph]
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between curl versions 3.0 dated 2017-10-06 and 3.1 dated 2017-12-12
DESCRIPTION | 8 MD5 | 31 - NEWS | 6 R/echo.R | 8 build/vignette.rds |binary data/curl_symbols.rda |binary inst/doc/intro.html | 1335 ++++++++++++++++++++++++++++++++++++++++++-- man/handle.Rd | 1 man/handle_cookies.Rd | 1 man/multipart.Rd | 1 src/Makevars.win | 4 src/curl.c | 2 tests/testthat/test-echo.R |only tests/testthat/test-gc.R | 1 tests/testthat/test-idn.R | 2 tests/testthat/test-multi.R | 1 tools/symbols-in-versions | 92 +-- 17 files changed, 1394 insertions(+), 99 deletions(-)
Title: Text Corpus Analysis
Description: Text corpus data analysis, with full support for international text (Unicode). Functions for reading data from newline-delimited 'JSON' files, for normalizing and tokenizing text, for searching for term occurrences, and for computing term occurrence frequencies, including n-grams.
Author: Patrick O. Perry [aut, cph, cre],
Finn Årup Nielsen [cph, dtc] (AFINN Sentiment Lexicon),
Martin Porter and Richard Boulton [ctb, cph, dtc] (Snowball Stemmer and
Stopword Lists),
The Regents of the University of California [ctb, cph] (Strtod Library
Procedure),
Carlo Strapparava and Alessandro Valitutti [cph, dtc] (WordNet-Affect
Lexicon),
Unicode, Inc. [cph, dtc] (Unicode Character Database)
Maintainer: Patrick O. Perry <pperry@stern.nyu.edu>
Diff between corpus versions 0.9.4 dated 2017-10-31 and 0.10.0 dated 2017-12-12
corpus-0.10.0/corpus/DESCRIPTION | 17 corpus-0.10.0/corpus/MD5 | 285 corpus-0.10.0/corpus/NAMESPACE | 17 corpus-0.10.0/corpus/NEWS | 21 corpus-0.10.0/corpus/R/coerce.R | 34 corpus-0.10.0/corpus/R/deprecated.R | 7 corpus-0.10.0/corpus/R/frame.R | 128 corpus-0.10.0/corpus/R/gutenberg.R | 25 corpus-0.10.0/corpus/R/json.R | 9 corpus-0.10.0/corpus/R/style.R |only corpus-0.10.0/corpus/R/text-base.R | 108 corpus-0.10.0/corpus/R/text-primitive.R | 17 corpus-0.10.0/corpus/R/text-utils.R |only corpus-0.10.0/corpus/R/text_locate.R | 9 corpus-0.10.0/corpus/build/vignette.rds |binary corpus-0.10.0/corpus/inst/doc/corpus.Rmd | 92 corpus-0.10.0/corpus/inst/doc/corpus.html | 92 corpus-0.10.0/corpus/inst/doc/stemmer.Rmd | 4 corpus-0.10.0/corpus/inst/doc/stemmer.html | 4 corpus-0.10.0/corpus/inst/doc/textdata.Rmd | 99 corpus-0.10.0/corpus/inst/doc/textdata.html | 99 corpus-0.10.0/corpus/man/corpus-deprecated.Rd | 21 corpus-0.10.0/corpus/man/print.corpus_frame.Rd | 5 corpus-0.10.0/corpus/src/Makevars | 25 corpus-0.10.0/corpus/src/corpus/corpus.xcodeproj/project.pbxproj | 148 corpus-0.10.0/corpus/src/corpus/lib/strntod.c | 2 corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/array.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/char.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/encode.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/error.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/escape.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/graph.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/graphscan.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/normalize.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/private/array.h |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/private/casefold.h | 2 corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/private/charwidth.h | 4467 ++++------ corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/private/combining.h | 4 corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/private/compose.h | 4 corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/private/decompose.h | 2 corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/private/graphbreak.h |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/render.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/text.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/textassign.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/textiter.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/textmap.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/src/utf8lite.h | 859 + corpus-0.10.0/corpus/src/corpus/lib/utf8lite/tests/check_charwidth.c | 26 corpus-0.10.0/corpus/src/corpus/lib/utf8lite/tests/check_graphscan.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/tests/check_render.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/tests/check_text.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/tests/check_textmap.c |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/tests/check_unicode.c | 90 corpus-0.10.0/corpus/src/corpus/lib/utf8lite/tests/testutil.c | 36 corpus-0.10.0/corpus/src/corpus/lib/utf8lite/tests/testutil.h | 28 corpus-0.10.0/corpus/src/corpus/lib/utf8lite/utf8lite.xcodeproj |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/util/gen-casefold.py | 2 corpus-0.10.0/corpus/src/corpus/lib/utf8lite/util/gen-charwidth.py | 92 corpus-0.10.0/corpus/src/corpus/lib/utf8lite/util/gen-combining.py | 4 corpus-0.10.0/corpus/src/corpus/lib/utf8lite/util/gen-compose.py | 4 corpus-0.10.0/corpus/src/corpus/lib/utf8lite/util/gen-decompose.py | 2 corpus-0.10.0/corpus/src/corpus/lib/utf8lite/util/gen-graphbreak.py |only corpus-0.10.0/corpus/src/corpus/lib/utf8lite/util/table-graphbreak.c |only corpus-0.10.0/corpus/src/corpus/src/data.c | 27 corpus-0.10.0/corpus/src/corpus/src/data.h | 2 corpus-0.10.0/corpus/src/corpus/src/datatype.c | 91 corpus-0.10.0/corpus/src/corpus/src/datatype.h | 6 corpus-0.10.0/corpus/src/corpus/src/filter.c | 96 corpus-0.10.0/corpus/src/corpus/src/filter.h | 20 corpus-0.10.0/corpus/src/corpus/src/intset.c | 4 corpus-0.10.0/corpus/src/corpus/src/main.c | 3 corpus-0.10.0/corpus/src/corpus/src/main_get.c | 8 corpus-0.10.0/corpus/src/corpus/src/main_ngrams.c | 38 corpus-0.10.0/corpus/src/corpus/src/main_scan.c | 3 corpus-0.10.0/corpus/src/corpus/src/main_sentences.c | 10 corpus-0.10.0/corpus/src/corpus/src/main_tokens.c | 53 corpus-0.10.0/corpus/src/corpus/src/ngram.c | 7 corpus-0.10.0/corpus/src/corpus/src/search.c | 39 corpus-0.10.0/corpus/src/corpus/src/search.h | 6 corpus-0.10.0/corpus/src/corpus/src/sentfilter.c | 98 corpus-0.10.0/corpus/src/corpus/src/sentfilter.h | 6 corpus-0.10.0/corpus/src/corpus/src/sentscan.c | 36 corpus-0.10.0/corpus/src/corpus/src/sentscan.h | 11 corpus-0.10.0/corpus/src/corpus/src/stem.c | 39 corpus-0.10.0/corpus/src/corpus/src/stem.h | 6 corpus-0.10.0/corpus/src/corpus/src/stopword.c |only corpus-0.10.0/corpus/src/corpus/src/stopword.h |only corpus-0.10.0/corpus/src/corpus/src/symtab.c | 43 corpus-0.10.0/corpus/src/corpus/src/symtab.h | 14 corpus-0.10.0/corpus/src/corpus/src/table.c | 6 corpus-0.10.0/corpus/src/corpus/src/termset.c | 6 corpus-0.10.0/corpus/src/corpus/src/textset.c | 18 corpus-0.10.0/corpus/src/corpus/src/textset.h | 8 corpus-0.10.0/corpus/src/corpus/src/tree.c | 20 corpus-0.10.0/corpus/src/corpus/src/unicode/sentbreakprop.h | 4 corpus-0.10.0/corpus/src/corpus/src/unicode/wordbreakprop.h | 4 corpus-0.10.0/corpus/src/corpus/src/wordscan.c | 30 corpus-0.10.0/corpus/src/corpus/src/wordscan.h | 11 corpus-0.10.0/corpus/src/corpus/tests/check_data.c | 3 corpus-0.10.0/corpus/src/corpus/tests/check_filter.c | 24 corpus-0.10.0/corpus/src/corpus/tests/check_intset.c | 6 corpus-0.10.0/corpus/src/corpus/tests/check_ngram.c | 8 corpus-0.10.0/corpus/src/corpus/tests/check_search.c | 14 corpus-0.10.0/corpus/src/corpus/tests/check_sentfilter.c | 32 corpus-0.10.0/corpus/src/corpus/tests/check_sentscan.c | 20 corpus-0.10.0/corpus/src/corpus/tests/check_stem.c | 10 corpus-0.10.0/corpus/src/corpus/tests/check_stopword.c |only corpus-0.10.0/corpus/src/corpus/tests/check_symtab.c | 21 corpus-0.10.0/corpus/src/corpus/tests/check_termset.c | 4 corpus-0.10.0/corpus/src/corpus/tests/check_tree.c | 10 corpus-0.10.0/corpus/src/corpus/tests/check_wordscan.c | 20 corpus-0.10.0/corpus/src/corpus/tests/testutil.c | 16 corpus-0.10.0/corpus/src/corpus/tests/testutil.h | 26 corpus-0.10.0/corpus/src/corpus/util/gen-sentbreak.py | 4 corpus-0.10.0/corpus/src/corpus/util/gen-wordbreak.py | 4 corpus-0.10.0/corpus/src/decode.c | 7 corpus-0.10.0/corpus/src/init.c | 9 corpus-0.10.0/corpus/src/json.c | 45 corpus-0.10.0/corpus/src/mkchar.c | 15 corpus-0.10.0/corpus/src/rcorpus.h | 37 corpus-0.10.0/corpus/src/search.c | 8 corpus-0.10.0/corpus/src/stemmer.c | 34 corpus-0.10.0/corpus/src/term_matrix.c | 35 corpus-0.10.0/corpus/src/term_stats.c | 38 corpus-0.10.0/corpus/src/termset.c | 54 corpus-0.10.0/corpus/src/text.c | 67 corpus-0.10.0/corpus/src/text_filter.c | 35 corpus-0.10.0/corpus/src/text_locate.c | 33 corpus-0.10.0/corpus/src/text_methods.c | 6 corpus-0.10.0/corpus/src/text_nunit.c | 6 corpus-0.10.0/corpus/src/text_split.c | 31 corpus-0.10.0/corpus/src/text_sub.c | 4 corpus-0.10.0/corpus/src/text_tokens.c | 10 corpus-0.10.0/corpus/src/text_trunc.c |only corpus-0.10.0/corpus/src/text_types.c | 4 corpus-0.10.0/corpus/src/wordlist.c | 11 corpus-0.10.0/corpus/tests/testthat/helper-capture_output.R | 3 corpus-0.10.0/corpus/tests/testthat/helper-locale.R | 7 corpus-0.10.0/corpus/tests/testthat/test-frame.R | 34 corpus-0.10.0/corpus/tests/testthat/test-text_filter.R | 3 corpus-0.10.0/corpus/tests/testthat/test-text_format.R |only corpus-0.10.0/corpus/tests/testthat/test-text_primitive.R | 37 corpus-0.10.0/corpus/tests/testthat/test-text_print.R | 32 corpus-0.10.0/corpus/vignettes/corpus.Rmd | 92 corpus-0.10.0/corpus/vignettes/stemmer.Rmd | 4 corpus-0.10.0/corpus/vignettes/textdata.Rmd | 99 corpus-0.9.4/corpus/R/utf8.R |only corpus-0.9.4/corpus/inst/doc/unicode.Rmd |only corpus-0.9.4/corpus/inst/doc/unicode.html |only corpus-0.9.4/corpus/man/utf8.Rd |only corpus-0.9.4/corpus/src/corpus/lib/utf8lite/src/utf8lite.c |only corpus-0.9.4/corpus/src/corpus/src/render.c |only corpus-0.9.4/corpus/src/corpus/src/render.h |only corpus-0.9.4/corpus/src/corpus/src/text.c |only corpus-0.9.4/corpus/src/corpus/src/text.h |only corpus-0.9.4/corpus/src/corpus/src/typemap.c |only corpus-0.9.4/corpus/src/corpus/src/typemap.h |only corpus-0.9.4/corpus/src/corpus/tests/check_text.c |only corpus-0.9.4/corpus/src/corpus/tests/check_typemap.c |only corpus-0.9.4/corpus/src/format.c |only corpus-0.9.4/corpus/src/print_table.c |only corpus-0.9.4/corpus/src/utf8.c |only corpus-0.9.4/corpus/src/utf8_normalize.c |only corpus-0.9.4/corpus/tests/testthat/test-utf8_encode.R |only corpus-0.9.4/corpus/tests/testthat/test-utf8_format.R |only corpus-0.9.4/corpus/tests/testthat/test-utf8_normalize.R |only corpus-0.9.4/corpus/tests/testthat/test-utf8_print.R |only corpus-0.9.4/corpus/tests/testthat/test-utf8_valid.R |only corpus-0.9.4/corpus/tests/testthat/test-utf8_width.R |only corpus-0.9.4/corpus/vignettes/unicode.Rmd |only 170 files changed, 4898 insertions(+), 3787 deletions(-)
Title: Automated Feature Selection from 'caret'
Description: Automated feature selection using variety of models
provided by 'caret' package.
This work was funded by Poland-Singapore bilateral cooperation
project no 2/3/POL-SIN/2012.
Author: Jakub Szlek [aut, cre],
Aleksander Mendyk [ctb]
Maintainer: Jakub Szlek <j.szlek@uj.edu.pl>
Diff between fscaret versions 0.9.4.1 dated 2016-10-18 and 0.9.4.2 dated 2017-12-12
DESCRIPTION | 8 ++++---- MD5 | 26 +++++++++++++------------- R/classVarImp.R | 6 +++--- R/fscaret.R | 10 +--------- R/impCalc.R | 16 ++++++++-------- R/regVarImp.R | 6 +++--- build/vignette.rds |binary inst/NEWS.Rd | 10 ++++++++++ inst/doc/fscaret.Rnw | 13 ++++++++----- inst/doc/fscaret.pdf |binary man/fscaret-package.Rd | 6 +++--- man/fscaret.Rd | 32 +++++++++++++------------------- man/impCalc.Rd | 13 ++++++------- vignettes/fscaret.Rnw | 13 ++++++++----- 14 files changed, 80 insertions(+), 79 deletions(-)
Title: A Simple XML Tree Parser and Generator
Description: Provides a simple XML tree parser/generator. It includes functions to read XML files into R objects, get information out of and into nodes, and write R objects back
to XML code. It's not as powerful as the 'XML' package and doesn't aim to be, but for simple XML handling it could be useful. It was originally developed for
the R GUI and IDE 'RKWard' <https://rkward.kde.org>, to make plugin development easier.
Author: Meik Michalke [aut, cre]
Maintainer: Meik Michalke <meik.michalke@hhu.de>
Diff between XiMpLe versions 0.10-1 dated 2017-04-10 and 0.10-2 dated 2017-12-12
XiMpLe-0.10-1/XiMpLe/inst/doc/XiMpLe_vignette.Rnw |only XiMpLe-0.10-1/XiMpLe/inst/doc/XiMpLe_vignette.pdf |only XiMpLe-0.10-1/XiMpLe/vignettes/XiMpLe_vignette.Rnw |only XiMpLe-0.10-2/XiMpLe/ChangeLog | 8 + XiMpLe-0.10-2/XiMpLe/DESCRIPTION | 22 +-- XiMpLe-0.10-2/XiMpLe/MD5 | 41 +++-- XiMpLe-0.10-2/XiMpLe/R/00_class_01_XiMpLe.node.R | 8 - XiMpLe-0.10-2/XiMpLe/R/00_class_02_XiMpLe.doc.R | 15 +- XiMpLe-0.10-2/XiMpLe/R/01_method_01_pasteXML.R | 36 +++-- XiMpLe-0.10-2/XiMpLe/R/01_method_02_node.R | 34 +++- XiMpLe-0.10-2/XiMpLe/R/01_method_04_validXML.R | 11 + XiMpLe-0.10-2/XiMpLe/R/01_method_05_XMLgenerators.R | 9 - XiMpLe-0.10-2/XiMpLe/R/XiMpLe-internal.R | 139 ++++++++++++-------- XiMpLe-0.10-2/XiMpLe/R/XiMpLe-package.R | 6 XiMpLe-0.10-2/XiMpLe/R/zzz_is_get_utils.R | 7 - XiMpLe-0.10-2/XiMpLe/build |only XiMpLe-0.10-2/XiMpLe/inst/CITATION | 4 XiMpLe-0.10-2/XiMpLe/inst/NEWS.Rd | 14 ++ XiMpLe-0.10-2/XiMpLe/inst/doc/XiMpLe_vignette.R | 64 ++++++++- XiMpLe-0.10-2/XiMpLe/inst/doc/XiMpLe_vignette.Rmd |only XiMpLe-0.10-2/XiMpLe/inst/doc/XiMpLe_vignette.html |only XiMpLe-0.10-2/XiMpLe/man/XMLGetters-methods.Rd | 3 XiMpLe-0.10-2/XiMpLe/man/XMLTree.Rd | 3 XiMpLe-0.10-2/XiMpLe/man/node.Rd | 3 XiMpLe-0.10-2/XiMpLe/vignettes/XiMpLe_vignette.Rmd |only 25 files changed, 300 insertions(+), 127 deletions(-)
Title: Interactive Visualizations for Profiling R Code
Description: Interactive visualizations for profiling R code.
Author: Winston Chang [aut, cre],
Javier Luraschi [aut],
RStudio [cph],
jQuery Foundation [cph] (jQuery library),
jQuery contributors [ctb, cph] (jQuery library; authors listed in
inst/www/shared/jquery-AUTHORS.txt),
Mike Bostock [ctb, cph] (D3 library),
D3 contributors [ctb] (D3 library),
Ivan Sagalaev [ctb, cph] (highlight.js library)
Maintainer: Winston Chang <winston@rstudio.com>
Diff between profvis versions 0.3.3 dated 2017-01-13 and 0.3.4 dated 2017-12-12
DESCRIPTION | 10 - MD5 | 32 +++-- NAMESPACE | 1 NEWS.md | 18 +++ R/file_contents.R | 6 + R/pause.R | 9 - README.md | 6 - inst/htmlwidgets/lib/jquery/jquery.min.js | 10 - inst/htmlwidgets/lib/profvis/profvis.js | 163 ++++++++++++++++-------------- inst/htmlwidgets/profvis.yaml | 4 man/parse_rprof.Rd | 1 man/pause.Rd | 1 man/print.profvis.Rd | 1 man/profvis.Rd | 1 man/profvisOutput.Rd | 1 man/renderProfvis.Rd | 1 src |only 17 files changed, 146 insertions(+), 119 deletions(-)
Title: Interval and Enum-Type Representation of Vectors
Description: Enum-type representation of vectors and representation
of intervals, including a method of coercing variables in data frames.
Author: Torsten Hothorn [aut, cre]
Maintainer: Torsten Hothorn <Torsten.Hothorn@R-project.org>
Diff between inum versions 0.9-2 dated 2017-02-27 and 1.0-0 dated 2017-12-12
DESCRIPTION | 10 +++++----- MD5 | 16 ++++++++-------- NAMESPACE | 1 + R/enum.R | 1 - R/inum.R | 37 ++++++++++++++++++++++++++----------- inst/NEWS.Rd | 10 ++++++++++ man/inum.Rd | 7 ++++++- tests/regtest.R | 2 ++ tests/regtest.Rout.save | 6 ++++-- 9 files changed, 62 insertions(+), 28 deletions(-)
Title: A Method to Download Department of Education College Scorecard
Data
Description: A method to download Department of Education College
Scorecard data using the public API
<https://collegescorecard.ed.gov/data/documentation/>. It is based on
the 'dplyr' model of piped commands to select and filter data in a
single chained function call. An API key from the U.S. Department of
Education is required.
Author: Benjamin Skinner [aut, cre]
Maintainer: Benjamin Skinner <btskinner@virginia.edu>
Diff between rscorecard versions 0.5.0 dated 2017-10-20 and 0.6.0 dated 2017-12-12
DESCRIPTION | 6 ++-- MD5 | 10 ++++---- NEWS.md | 7 +++++ R/distance.R | 34 +++++++++++++++++++++++++-- man/sc_zip.Rd | 15 +++++++++++- tests/testthat/test-distance.R | 51 +++++++++++++++++++++++++++++++++-------- 6 files changed, 103 insertions(+), 20 deletions(-)
Title: Utilities for Working with Air Quality Monitoring Data
Description: Utilities for working with air quality monitoring data
with a focus on small particulates (PM2.5) generated by wildfire
smoke. Functions are provided for downloading available data from
the United States Environmental Protection Agency (US EPA) and
it's AirNow air quality site. Additional sources of PM2.5 data
made accessible by the package include: AIRSIS (password protected),
the Western Regional Climate Center (WRCC) and the open source site OpenAQ.
Author: Jonathan Callahan [aut, cre],
Rohan Aras [aut],
Zach Dingels [aut],
Jon Hagg [aut],
Jimin Kim [aut],
Helen Miller [aut],
Rex Thompson [aut],
Alice Yang [aut]
Maintainer: Jonathan Callahan <jonathan.s.callahan@gmail.com>
Diff between PWFSLSmoke versions 0.99.9 dated 2017-03-12 and 0.99.33 dated 2017-12-12
DESCRIPTION | 20 - MD5 | 422 ++++++++++++++------------ NAMESPACE | 9 R/PWFSLSmoke.R | 38 ++ R/addBullseye.R | 20 - R/addClustering.R | 53 ++- R/addGoogleMetadata.R | 107 ++++-- R/addIcon.R | 26 - R/addMarker.R |only R/addMazamaMetadata.R | 5 R/addShadedBackground.R | 2 R/addShadedNight.R | 2 R/airnow_createMetaDataframes.R | 2 R/airnow_load.R | 2 R/airnow_loadLatest.R | 2 R/airsisDump_createMonitorObject.R | 96 +++--- R/airsisDump_identifyMonitorType.R | 30 + R/airsisDump_parseData.R | 118 +++---- R/airsis_BAM1020QualityControl.R |only R/airsis_EBAMQualityControl.R | 145 +++++++-- R/airsis_ESAMQualityControl.R | 125 ++++++- R/airsis_availableUnits.R |only R/airsis_createDataDataframe.R | 15 R/airsis_createMetaDataframe.R | 15 R/airsis_createMonitorObject.R | 14 R/airsis_createRawDataframe.R | 38 ++ R/airsis_currentData.R |only R/airsis_currentStatus.R |only R/airsis_identifyMonitorType.R | 4 R/airsis_loadLatest.R | 2 R/airsis_parseData.R | 56 ++- R/airsis_qualityControl.R | 10 R/distance.R | 18 - R/epa_createDataDataframe.R | 2 R/esriMap_getMap.R |only R/esriMap_plotOnStaticMap.R |only R/monitorDygraph.R | 7 R/monitorEsriMap.R |only R/monitorGoogleMap.R | 6 R/monitorMap.R | 53 ++- R/monitorMap_performance.R | 72 ++-- R/monitorPlot_dailyBarplot.R | 7 R/monitorPlot_hourlyBarplot.R | 4 R/monitorPlot_noData.R | 2 R/monitorPlot_rollingMean.R | 2 R/monitorPlot_timeOfDaySpaghetti.R | 7 R/monitorPlot_timeseries.R | 13 R/monitor_aqi.R |only R/monitor_collapse.R | 14 R/monitor_combine.R | 14 R/monitor_dailyStatistic.R | 6 R/monitor_dailyThreshold.R | 4 R/monitor_distance.R | 10 R/monitor_isolate.R | 2 R/monitor_nowcast.R | 166 ++++++---- R/monitor_reorder.R | 11 R/monitor_replaceData.R | 2 R/monitor_rollingMean.R | 4 R/monitor_scaleData.R |only R/monitor_subset.R | 5 R/monitor_subsetBy.R | 8 R/monitor_subsetByDistance.R | 14 R/monitor_subsetData.R | 28 - R/monitor_subsetMeta.R | 23 - R/monitor_timeAverage.R | 8 R/monitor_trim.R | 12 R/openaq_assignStateCode.R | 2 R/openaq_createDataDataframes.R | 4 R/openaq_createMetaDataframes.R | 2 R/parseDatetime.R | 42 +- R/rawPlot_pollutionRose.R | 2 R/rawPlot_timeOfDaySpaghetti.R | 4 R/rawPlot_windRose.R | 4 R/raw_enhance.R | 117 ++++--- R/timeInfo.R | 44 +- R/wrccDump_createMonitorObject.R | 30 + R/wrccDump_parseData.R | 14 R/wrcc_EBAMQualityControl.R | 146 ++++++++- R/wrcc_ESAMQualityControl.R | 146 ++++++++- R/wrcc_createDataDataframe.R | 18 - R/wrcc_createMetaDataframe.R | 13 R/wrcc_createMonitorObject.R | 34 +- R/wrcc_createRawDataframe.R | 62 +++ R/wrcc_downloadData.R | 18 - R/wrcc_loadLatest.R | 2 R/wrcc_parseData.R | 2 README.md | 18 - build/vignette.rds |binary data/CarmelValley.RData |binary data/Northwest_Megafires.RData |binary data/WRCC.RData |binary inst/doc/Data_Model.R | 13 inst/doc/Data_Model.Rmd | 15 inst/doc/Data_Model.html | 469 +++++++++++++++++++++-------- inst/doc/Maps_and_Timeseries_Plots.html | 507 +++++++++++++++++++++----------- inst/doc/NowCast.R |only inst/doc/NowCast.Rmd |only inst/doc/NowCast.html |only inst/icons/marker_AQI1.png |only inst/icons/marker_AQI2.png |only inst/icons/marker_AQI3.png |only inst/icons/marker_AQI4.png |only inst/icons/marker_AQI5.png |only inst/icons/marker_AQI6.png |only inst/icons/marker_blue.png |only inst/icons/marker_green.png |only inst/icons/marker_orange.png |only inst/icons/marker_red.png |only inst/icons/marker_yellow.png |only man/AIRSIS.Rd |only man/AQI.Rd | 3 man/CONUS.Rd | 1 man/CarmelValley.Rd | 1 man/Northwest_Megafires.Rd | 1 man/WRCC.Rd | 1 man/addAQILegend.Rd | 1 man/addAQILines.Rd | 1 man/addBullseye.Rd | 9 man/addClustering.Rd | 5 man/addGoogleMetadata.Rd | 6 man/addIcon.Rd | 11 man/addMarker.Rd |only man/addMazamaMetadata.Rd | 5 man/addShadedBackground.Rd | 3 man/addShadedNight.Rd | 3 man/airnow_createDataDataframes.Rd | 1 man/airnow_createMetaDataframes.Rd | 3 man/airnow_downloadData.Rd | 1 man/airnow_downloadHourlyData.Rd | 1 man/airnow_downloadSites.Rd | 1 man/airnow_load.Rd | 3 man/airnow_loadLatest.Rd | 3 man/airnow_qualityControl.Rd | 1 man/airsisDump_createMonitorObject.Rd | 8 man/airsisDump_identifyMonitorType.Rd | 1 man/airsisDump_parseData.Rd | 29 - man/airsis_BAM1020QualityControl.Rd |only man/airsis_EBAMQualityControl.Rd | 5 man/airsis_ESAMQualityControl.Rd | 8 man/airsis_availableUnits.Rd |only man/airsis_createDataDataframe.Rd | 3 man/airsis_createMetaDataframe.Rd | 7 man/airsis_createMonitorObject.Rd | 1 man/airsis_createRawDataframe.Rd | 5 man/airsis_currentData.Rd |only man/airsis_currentStatus.Rd |only man/airsis_downloadData.Rd | 1 man/airsis_identifyMonitorType.Rd | 1 man/airsis_loadLatest.Rd | 3 man/airsis_parseData.Rd | 1 man/airsis_qualityControl.Rd | 1 man/distance.Rd | 7 man/epa_createDataDataframe.Rd | 1 man/epa_createMetaDataframe.Rd | 1 man/epa_createMonitorObject.Rd | 1 man/epa_downloadData.Rd | 1 man/esriMap_getMap.Rd |only man/esriMap_plotOnStaticMap.Rd |only man/logLevels.Rd | 9 man/logger.debug.Rd | 1 man/logger.error.Rd | 1 man/logger.fatal.Rd | 1 man/logger.info.Rd | 1 man/logger.setLevel.Rd | 1 man/logger.setup.Rd | 1 man/logger.trace.Rd | 1 man/logger.warn.Rd | 1 man/monitorDygraph.Rd | 8 man/monitorEsriMap.Rd |only man/monitorGoogleMap.Rd | 7 man/monitorLeaflet.Rd | 1 man/monitorMap.Rd | 3 man/monitorMap_performance.Rd | 8 man/monitorPlot_dailyBarplot.Rd | 5 man/monitorPlot_hourlyBarplot.Rd | 5 man/monitorPlot_noData.Rd | 3 man/monitorPlot_rollingMean.Rd | 3 man/monitorPlot_timeOfDaySpaghetti.Rd | 3 man/monitorPlot_timeseries.Rd | 7 man/monitor_aqi.Rd |only man/monitor_collapse.Rd | 9 man/monitor_combine.Rd | 9 man/monitor_dailyStatistic.Rd | 5 man/monitor_dailyThreshold.Rd | 5 man/monitor_distance.Rd | 9 man/monitor_isolate.Rd | 3 man/monitor_nowcast.Rd | 50 ++- man/monitor_performance.Rd | 1 man/monitor_reorder.Rd | 9 man/monitor_replaceData.Rd | 3 man/monitor_rollingMean.Rd | 1 man/monitor_scaleData.Rd |only man/monitor_subset.Rd | 1 man/monitor_subsetBy.Rd | 5 man/monitor_subsetByDistance.Rd | 11 man/monitor_subsetData.Rd | 7 man/monitor_subsetMeta.Rd | 1 man/monitor_timeAverage.Rd | 5 man/monitor_trim.Rd | 7 man/openaq_assignStateCode.Rd | 1 man/openaq_createDataDataframes.Rd | 3 man/openaq_createMetaDataframes.Rd | 1 man/openaq_downloadData.Rd | 1 man/parseDatetime.Rd | 8 man/rawPlot_pollutionRose.Rd | 3 man/rawPlot_timeOfDaySpaghetti.Rd | 3 man/rawPlot_timeseries.Rd | 1 man/rawPlot_windRose.Rd | 3 man/raw_enhance.Rd | 13 man/raw_getHighlightDates.Rd | 1 man/skill_ROC.Rd | 1 man/skill_ROCPlot.Rd | 1 man/skill_confusionMatrix.Rd | 1 man/timeInfo.Rd | 35 +- man/wrccDump_createMonitorObject.Rd | 8 man/wrccDump_identifyMonitorType.Rd | 1 man/wrccDump_parseData.Rd | 1 man/wrcc_EBAMQualityControl.Rd | 5 man/wrcc_ESAMQualityControl.Rd | 6 man/wrcc_createDataDataframe.Rd | 3 man/wrcc_createMetaDataframe.Rd | 5 man/wrcc_createMonitorObject.Rd | 13 man/wrcc_createRawDataframe.Rd | 21 + man/wrcc_downloadData.Rd | 11 man/wrcc_identifyMonitorType.Rd | 1 man/wrcc_loadLatest.Rd | 3 man/wrcc_parseData.Rd | 1 man/wrcc_qualityControl.Rd | 1 vignettes/Data_Model.Rmd | 15 vignettes/NowCast.Rmd |only 230 files changed, 2682 insertions(+), 1480 deletions(-)
Title: Fit Projected 2D Profiles to Galaxy Images
Description: Get data / Define model / ??? / ProFit! ProFit is a Bayesian galaxy fitting tool that uses a fast C++ image generation library and a flexible interface to a large number of likelihood samplers.
Author: Aaron Robotham, Dan Taranu, Rodrigo Tobar
Maintainer: Aaron Robotham <aaron.robotham@uwa.edu.au>
Diff between ProFit versions 1.0.2 dated 2016-11-21 and 1.1.0 dated 2017-12-12
ProFit-1.0.2/ProFit/R/profitAddMats.R |only ProFit-1.0.2/ProFit/R/profitBruteConv.R |only ProFit-1.0.2/ProFit/R/profitInterp2d.R |only ProFit-1.0.2/ProFit/R/profitMag2Mu.R |only ProFit-1.0.2/ProFit/R/profitMisc.R |only ProFit-1.0.2/ProFit/R/profitRemakeModellist.R |only ProFit-1.0.2/ProFit/man/profitCheckFinesample.Rd |only ProFit-1.0.2/ProFit/man/profitRemakeModellist.Rd |only ProFit-1.0.2/ProFit/src/Makevars |only ProFit-1.0.2/ProFit/src/libprofit/src/profit.cpp |only ProFit-1.1.0/ProFit/DESCRIPTION | 21 ProFit-1.1.0/ProFit/MD5 | 388 - ProFit-1.1.0/ProFit/NAMESPACE | 19 ProFit-1.1.0/ProFit/NEWS | 18 ProFit-1.1.0/ProFit/R/RcppExports.R | 4 ProFit-1.1.0/ProFit/R/profitBenchmark.R |only ProFit-1.1.0/ProFit/R/profitBenchmarkConv.R | 39 ProFit-1.1.0/ProFit/R/profitConvolvePSF.R | 24 ProFit-1.1.0/ProFit/R/profitConvolver.R |only ProFit-1.1.0/ProFit/R/profitCubaBrokenExp.R | 21 ProFit-1.1.0/ProFit/R/profitCubaCoreSersic.R | 10 ProFit-1.1.0/ProFit/R/profitCubaFerrer.R | 10 ProFit-1.1.0/ProFit/R/profitCubaKing.R | 10 ProFit-1.1.0/ProFit/R/profitCubaMoffat.R | 10 ProFit-1.1.0/ProFit/R/profitCubaSersic.R | 10 ProFit-1.1.0/ProFit/R/profitEllipsePlot.R | 13 ProFit-1.1.0/ProFit/R/profitHPC.R |only ProFit-1.1.0/ProFit/R/profitLikeModel.R | 300 - ProFit-1.1.0/ProFit/R/profitMakeGaussianPSF.R | 15 ProFit-1.1.0/ProFit/R/profitMakeModel.R | 87 ProFit-1.1.0/ProFit/R/profitMakePlots.R | 89 ProFit-1.1.0/ProFit/R/profitMakePointSource.R | 11 ProFit-1.1.0/ProFit/R/profitRemakeModelList.R |only ProFit-1.1.0/ProFit/R/profitSetupData.R | 250 - ProFit-1.1.0/ProFit/R/profitUtility.R |only ProFit-1.1.0/ProFit/build/partial.rdb |binary ProFit-1.1.0/ProFit/build/vignette.rds |binary ProFit-1.1.0/ProFit/cleanup |only ProFit-1.1.0/ProFit/configure |only ProFit-1.1.0/ProFit/inst/CITATION |only ProFit-1.1.0/ProFit/inst/doc/ProFit-Galaxy-Fit-Example.R | 84 ProFit-1.1.0/ProFit/inst/doc/ProFit-Galaxy-Fit-Example.Rmd | 98 ProFit-1.1.0/ProFit/inst/doc/ProFit-Galaxy-Fit-Example.html | 132 ProFit-1.1.0/ProFit/inst/doc/ProFit-Isophotal-Ellipses.R |only ProFit-1.1.0/ProFit/inst/doc/ProFit-Isophotal-Ellipses.Rmd |only ProFit-1.1.0/ProFit/inst/doc/ProFit-Isophotal-Ellipses.html |only ProFit-1.1.0/ProFit/inst/doc/ProFit-Make-Model-Image.R | 209 ProFit-1.1.0/ProFit/inst/doc/ProFit-Make-Model-Image.Rmd | 179 ProFit-1.1.0/ProFit/inst/doc/ProFit-Make-Model-Image.html | 191 ProFit-1.1.0/ProFit/inst/doc/ProFit-OpenCL-OpenMP.R |only ProFit-1.1.0/ProFit/inst/doc/ProFit-OpenCL-OpenMP.Rmd |only ProFit-1.1.0/ProFit/inst/doc/ProFit-OpenCL-OpenMP.html |only ProFit-1.1.0/ProFit/inst/doc/ProFit-PSF-Convolution-Can-Be-Convoluted.R |only ProFit-1.1.0/ProFit/inst/doc/ProFit-PSF-Convolution-Can-Be-Convoluted.Rmd |only ProFit-1.1.0/ProFit/inst/doc/ProFit-PSF-Convolution-Can-Be-Convoluted.html |only ProFit-1.1.0/ProFit/inst/doc/ProFit-PSF-Fit-Example.R | 59 ProFit-1.1.0/ProFit/inst/doc/ProFit-PSF-Fit-Example.Rmd | 63 ProFit-1.1.0/ProFit/inst/doc/ProFit-PSF-Fit-Example.html | 49 ProFit-1.1.0/ProFit/inst/doc/ProFit-Sigma-Maps.R |only ProFit-1.1.0/ProFit/inst/doc/ProFit-Sigma-Maps.Rmd |only ProFit-1.1.0/ProFit/inst/doc/ProFit-Sigma-Maps.html |only ProFit-1.1.0/ProFit/inst/doc/ProFit-The-Full-Monty.R |only ProFit-1.1.0/ProFit/inst/doc/ProFit-The-Full-Monty.Rmd |only ProFit-1.1.0/ProFit/inst/doc/ProFit-The-Full-Monty.html |only ProFit-1.1.0/ProFit/inst/extdata/KiDS/G265911fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G265911psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G265911segim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G265911sigma.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G265940fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G265940psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G265940segim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G265940sigma.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G266033fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G266033psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G266033segim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G266033sigma.fits | 223 ProFit-1.1.0/ProFit/inst/extdata/KiDS/G266035fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G266035psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G266035segim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G266035sigma.fits | 224 ProFit-1.1.0/ProFit/inst/extdata/KiDS/G266662fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G266662psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G266662segim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G266662sigma.fits | 547 -- ProFit-1.1.0/ProFit/inst/extdata/KiDS/G267199fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G267199psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G267199segim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G267199sigma.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G267489fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G267489psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G267489segim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G267489sigma.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G267525fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G267525psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G267525segim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G267525sigma.fits | 101 ProFit-1.1.0/ProFit/inst/extdata/KiDS/G278109fitim.fits | 801 --- ProFit-1.1.0/ProFit/inst/extdata/KiDS/G278109psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G278109segim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G278109sigma.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G279148fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G279148psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G279148segim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/KiDS/G279148sigma.fits | 2494 ---------- ProFit-1.1.0/ProFit/inst/extdata/SDSS/G265911fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G265911psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G265911sigma.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G265940fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G265940psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G265940sigma.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G266033fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G266033psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G266033sigma.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G266035fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G266035psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G266035sigma.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G266662fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G266662psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G266662sigma.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G267199fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G267199psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G267199sigma.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G267489fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G267489psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G267489sigma.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G267525fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G267525psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G267525sigma.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G278109fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G278109psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G278109sigma.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G279148fitim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G279148psfim.fits |binary ProFit-1.1.0/ProFit/inst/extdata/SDSS/G279148sigma.fits |binary ProFit-1.1.0/ProFit/man/ExampleInit.Rd | 4 ProFit-1.1.0/ProFit/man/ProFit-package.Rd | 19 ProFit-1.1.0/ProFit/man/profitAddMats.Rd | 12 ProFit-1.1.0/ProFit/man/profitAvailableConvolvers.Rd |only ProFit-1.1.0/ProFit/man/profitAvailableIntegrators.Rd |only ProFit-1.1.0/ProFit/man/profitBenchmark.Rd |only ProFit-1.1.0/ProFit/man/profitBenchmarkConv.Rd | 80 ProFit-1.1.0/ProFit/man/profitBenchmarkResultBest.Rd |only ProFit-1.1.0/ProFit/man/profitBenchmarkResultStripPointers.Rd |only ProFit-1.1.0/ProFit/man/profitBruteConv.Rd | 13 ProFit-1.1.0/ProFit/man/profitCheckIsPositiveInteger.Rd |only ProFit-1.1.0/ProFit/man/profitConvolve.Rd |only ProFit-1.1.0/ProFit/man/profitConvolvePSF.Rd | 37 ProFit-1.1.0/ProFit/man/profitCubaBrokenExp.Rd | 13 ProFit-1.1.0/ProFit/man/profitCubaCoreSersic.Rd | 12 ProFit-1.1.0/ProFit/man/profitCubaFerrer.Rd | 13 ProFit-1.1.0/ProFit/man/profitCubaKing.Rd | 13 ProFit-1.1.0/ProFit/man/profitCubaMoffat.Rd | 12 ProFit-1.1.0/ProFit/man/profitCubaSersic.Rd | 12 ProFit-1.1.0/ProFit/man/profitDeprojectImageEllipse.Rd |only ProFit-1.1.0/ProFit/man/profitEllipse.Rd | 2 ProFit-1.1.0/ProFit/man/profitEllipsePlot.Rd | 17 ProFit-1.1.0/ProFit/man/profitFlux2Mag.Rd |only ProFit-1.1.0/ProFit/man/profitGetOpenCLEnvs.Rd |only ProFit-1.1.0/ProFit/man/profitHasOpenCL.Rd |only ProFit-1.1.0/ProFit/man/profitInterp2d.Rd | 8 ProFit-1.1.0/ProFit/man/profitLikeModel.Rd | 42 ProFit-1.1.0/ProFit/man/profitMakeConvolver.Rd |only ProFit-1.1.0/ProFit/man/profitMakeGaussianPSF.Rd | 17 ProFit-1.1.0/ProFit/man/profitMakeModel.Rd | 65 ProFit-1.1.0/ProFit/man/profitMakePlots.Rd | 30 ProFit-1.1.0/ProFit/man/profitMakePointSource.Rd | 26 ProFit-1.1.0/ProFit/man/profitMakePriors.Rd |only ProFit-1.1.0/ProFit/man/profitOpenCLEnv.Rd |only ProFit-1.1.0/ProFit/man/profitOpenCLEnvInfo.Rd |only ProFit-1.1.0/ProFit/man/profitPoissonMonteCarlo.Rd |only ProFit-1.1.0/ProFit/man/profitRemakeModelList.Rd |only ProFit-1.1.0/ProFit/man/profitSetupData.Rd | 138 ProFit-1.1.0/ProFit/src/Makevars.in |only ProFit-1.1.0/ProFit/src/Makevars.win |only ProFit-1.1.0/ProFit/src/RcppExports.cpp | 4 ProFit-1.1.0/ProFit/src/libprofit/VERSION | 2 ProFit-1.1.0/ProFit/src/libprofit/profit/brokenexponential.h | 73 ProFit-1.1.0/ProFit/src/libprofit/profit/cl |only ProFit-1.1.0/ProFit/src/libprofit/profit/common.h |only ProFit-1.1.0/ProFit/src/libprofit/profit/config.h.in |only ProFit-1.1.0/ProFit/src/libprofit/profit/convolve.h | 251 - ProFit-1.1.0/ProFit/src/libprofit/profit/coresersic.h | 80 ProFit-1.1.0/ProFit/src/libprofit/profit/exceptions.h |only ProFit-1.1.0/ProFit/src/libprofit/profit/ferrer.h | 70 ProFit-1.1.0/ProFit/src/libprofit/profit/fft.h |only ProFit-1.1.0/ProFit/src/libprofit/profit/image.h |only ProFit-1.1.0/ProFit/src/libprofit/profit/king.h | 78 ProFit-1.1.0/ProFit/src/libprofit/profit/model.h |only ProFit-1.1.0/ProFit/src/libprofit/profit/moffat.h | 75 ProFit-1.1.0/ProFit/src/libprofit/profit/opencl.h |only ProFit-1.1.0/ProFit/src/libprofit/profit/profile.h |only ProFit-1.1.0/ProFit/src/libprofit/profit/profit.h | 239 ProFit-1.1.0/ProFit/src/libprofit/profit/psf.h | 23 ProFit-1.1.0/ProFit/src/libprofit/profit/radial.h | 162 ProFit-1.1.0/ProFit/src/libprofit/profit/sersic.h | 105 ProFit-1.1.0/ProFit/src/libprofit/profit/sky.h | 24 ProFit-1.1.0/ProFit/src/libprofit/profit/utils.h | 41 ProFit-1.1.0/ProFit/src/libprofit/src/brokenexponential.cpp | 126 ProFit-1.1.0/ProFit/src/libprofit/src/cl |only ProFit-1.1.0/ProFit/src/libprofit/src/convolve.cpp | 522 +- ProFit-1.1.0/ProFit/src/libprofit/src/coresersic.cpp | 104 ProFit-1.1.0/ProFit/src/libprofit/src/exceptions.cpp |only ProFit-1.1.0/ProFit/src/libprofit/src/ferrer.cpp | 79 ProFit-1.1.0/ProFit/src/libprofit/src/fft.cpp |only ProFit-1.1.0/ProFit/src/libprofit/src/image.cpp |only ProFit-1.1.0/ProFit/src/libprofit/src/king.cpp | 88 ProFit-1.1.0/ProFit/src/libprofit/src/model.cpp |only ProFit-1.1.0/ProFit/src/libprofit/src/moffat.cpp | 80 ProFit-1.1.0/ProFit/src/libprofit/src/opencl.cpp |only ProFit-1.1.0/ProFit/src/libprofit/src/profile.cpp |only ProFit-1.1.0/ProFit/src/libprofit/src/psf.cpp | 37 ProFit-1.1.0/ProFit/src/libprofit/src/radial.cpp | 618 ++ ProFit-1.1.0/ProFit/src/libprofit/src/sersic.cpp | 233 ProFit-1.1.0/ProFit/src/libprofit/src/sky.cpp | 23 ProFit-1.1.0/ProFit/src/libprofit/src/utils.cpp | 64 ProFit-1.1.0/ProFit/src/r_profit.cpp | 612 ++ ProFit-1.1.0/ProFit/vignettes/ProFit-Galaxy-Fit-Example.Rmd | 98 ProFit-1.1.0/ProFit/vignettes/ProFit-Isophotal-Ellipses.Rmd |only ProFit-1.1.0/ProFit/vignettes/ProFit-Make-Model-Image.Rmd | 179 ProFit-1.1.0/ProFit/vignettes/ProFit-OpenCL-OpenMP.Rmd |only ProFit-1.1.0/ProFit/vignettes/ProFit-PSF-Convolution-Can-Be-Convoluted.Rmd |only ProFit-1.1.0/ProFit/vignettes/ProFit-PSF-Fit-Example.Rmd | 63 ProFit-1.1.0/ProFit/vignettes/ProFit-Sigma-Maps.Rmd |only ProFit-1.1.0/ProFit/vignettes/ProFit-The-Full-Monty.Rmd |only 224 files changed, 5502 insertions(+), 6039 deletions(-)
Title: Tools to Format Numbers for Publication
Description: Format numbers and plots for publication; includes the removal of leading zeros,
standardization of number of digits, addition of affixes, and a p-value formatter. These
tools combine the functionality of several 'base' functions such as 'paste()', 'format()',
and 'sprintf()' into specific use case functions that are named in a way that is
consistent with usage, making their names easy to remember and easy to deploy.
Author: Tyler Rinker [aut, cre]
Maintainer: Tyler Rinker <tyler.rinker@gmail.com>
Diff between numform versions 0.3.0 dated 2017-09-07 and 0.4.0 dated 2017-12-12
numform-0.3.0/numform/tools/figure/unnamed-chunk-35-1.png |only numform-0.4.0/numform/DESCRIPTION | 33 numform-0.4.0/numform/MD5 | 97 +- numform-0.4.0/numform/NAMESPACE | 32 numform-0.4.0/numform/NEWS | 36 numform-0.4.0/numform/R/alignment.R | 6 numform-0.4.0/numform/R/as_factor.R | 9 numform-0.4.0/numform/R/constants.R | 9 numform-0.4.0/numform/R/f_12_hour.R | 54 + numform-0.4.0/numform/R/f_comma.R | 2 numform-0.4.0/numform/R/f_date.R | 2 numform-0.4.0/numform/R/f_degree.R |only numform-0.4.0/numform/R/f_month.R | 18 numform-0.4.0/numform/R/f_num.R | 4 numform-0.4.0/numform/R/f_parenthesis.R | 4 numform-0.4.0/numform/R/f_quarter.R |only numform-0.4.0/numform/R/f_title.R | 22 numform-0.4.0/numform/R/f_weekday.R | 26 numform-0.4.0/numform/R/f_wrap.R | 40 - numform-0.4.0/numform/R/f_year.R | 42 + numform-0.4.0/numform/R/fv_num_percent.R | 2 numform-0.4.0/numform/R/utils.R | 21 numform-0.4.0/numform/README.md | 505 ++++++++------ numform-0.4.0/numform/inst/CITATION | 12 numform-0.4.0/numform/man/alignment.Rd | 5 numform-0.4.0/numform/man/as_factor.Rd | 4 numform-0.4.0/numform/man/constants.Rd | 5 numform-0.4.0/numform/man/f_12_hour.Rd | 24 numform-0.4.0/numform/man/f_comma.Rd | 2 numform-0.4.0/numform/man/f_date.Rd | 2 numform-0.4.0/numform/man/f_degree.Rd |only numform-0.4.0/numform/man/f_month.Rd | 12 numform-0.4.0/numform/man/f_num.Rd | 4 numform-0.4.0/numform/man/f_parenthesis.Rd | 4 numform-0.4.0/numform/man/f_quarter.Rd |only numform-0.4.0/numform/man/f_title.Rd | 16 numform-0.4.0/numform/man/f_weekday.Rd | 16 numform-0.4.0/numform/man/f_wrap.Rd | 15 numform-0.4.0/numform/man/f_year.Rd | 33 numform-0.4.0/numform/man/fv_num_percent.Rd | 2 numform-0.4.0/numform/tools/figure/unnamed-chunk-13-1.png |binary numform-0.4.0/numform/tools/figure/unnamed-chunk-14-1.png |binary numform-0.4.0/numform/tools/figure/unnamed-chunk-15-1.png |binary numform-0.4.0/numform/tools/figure/unnamed-chunk-16-1.png |only numform-0.4.0/numform/tools/figure/unnamed-chunk-17-1.png |only numform-0.4.0/numform/tools/figure/unnamed-chunk-18-1.png |only numform-0.4.0/numform/tools/figure/unnamed-chunk-19-1.png |only numform-0.4.0/numform/tools/figure/unnamed-chunk-21-1.png |only numform-0.4.0/numform/tools/figure/unnamed-chunk-22-1.png |only numform-0.4.0/numform/tools/figure/unnamed-chunk-23-1.png |binary numform-0.4.0/numform/tools/figure/unnamed-chunk-24-1.png |binary numform-0.4.0/numform/tools/figure/unnamed-chunk-25-1.png |only numform-0.4.0/numform/tools/figure/unnamed-chunk-26-1.png |only numform-0.4.0/numform/tools/figure/unnamed-chunk-37-1.png |only numform-0.4.0/numform/tools/figure/unnamed-chunk-38-1.png |only numform-0.4.0/numform/tools/figure/unnamed-chunk-39-1.png |only numform-0.4.0/numform/tools/figure/unnamed-chunk-40-1.png |only numform-0.4.0/numform/tools/figure/unnamed-chunk-41-1.png |only numform-0.4.0/numform/tools/figure/unnamed-chunk-42-1.png |only 59 files changed, 789 insertions(+), 331 deletions(-)
Title: Most Likely Transformations
Description: Likelihood-based estimation of conditional transformation
models via the most likely transformation approach described in
Hothorn et al. (2017) <DOI:10.1111/sjos.12291>.
Author: Torsten Hothorn [aut, cre]
Maintainer: Torsten Hothorn <Torsten.Hothorn@R-project.org>
Diff between mlt versions 0.2-0 dated 2017-06-20 and 0.2-1 dated 2017-12-12
DESCRIPTION | 10 +++++----- MD5 | 36 ++++++++++++++++++------------------ R/R.R | 7 +++++++ R/dpq_etc.R | 22 +++++++++++----------- R/methods.R | 4 ++-- R/plot.R | 6 +++--- R/predict.R | 8 ++++---- inst/NEWS.Rd | 8 ++++++++ man/ctm.Rd | 4 ++-- man/mlt-package.Rd | 4 ++-- man/mlt.Rd | 4 ++-- man/predict.Rd | 6 +++--- tests/Cox-Ex.Rout.save | 7 ++----- tests/bugfixes.Rout.save | 29 ++--------------------------- tests/dpq-Ex.R | 4 ++-- tests/dpq-Ex.Rout.save | 12 ++++++------ tests/lm-Ex.Rout.save | 16 ++-------------- tests/predict-Ex.R | 2 +- tests/predict-Ex.Rout.save | 30 +++--------------------------- 19 files changed, 85 insertions(+), 134 deletions(-)
Title: Exploratory Chemometrics for Spectroscopy
Description: A collection of functions for top-down exploratory data analysis
of spectral data obtained via nuclear magnetic resonance (NMR), infrared (IR) or
Raman spectroscopy. Includes functions for plotting and inspecting spectra, peak
alignment, hierarchical cluster analysis (HCA), principal components analysis
(PCA) and model-based clustering. Robust methods appropriate for this type of
high-dimensional data are available. ChemoSpec is designed with metabolomics
data sets in mind, where the samples fall into groups such as treatment and
control. Graphical output is formatted consistently for publication quality
plots. ChemoSpec is intended to be very user friendly and help you get usable
results quickly. A vignette covering typical operations is available.
Author: Bryan A. Hanson [aut, cre],
Mike Bostock [cph, ctb] (author of the d3.js library used in
plotSpectraJS, http://d3js.org)
Maintainer: Bryan A. Hanson <hanson@depauw.edu>
Diff between ChemoSpec versions 4.4.85 dated 2017-07-27 and 4.4.97 dated 2017-12-12
DESCRIPTION | 8 ++++---- MD5 | 28 ++++++++++++++-------------- NEWS | 8 ++++++++ R/c_pcaSpectra.R | 2 +- R/chkSpectra.R | 14 +++++++++++++- R/cv_pcaSpectra.R | 2 +- R/files2SpectraObject.R | 17 ++++++++--------- R/removeGroup.R | 8 +++----- R/rowDist.R | 14 +++++++------- inst/doc/ChemoSpec.pdf |binary man/c_pcaSpectra.Rd | 2 +- man/cv_pcaSpectra.Rd | 2 +- man/files2SpectraObject.Rd | 15 ++++++++------- man/removeGroup.Rd | 5 +---- man/rowDist.Rd | 14 +++++++------- 15 files changed, 77 insertions(+), 62 deletions(-)
Title: Most Likely Transformations: Documentation and Regression Tests
Description: Additional documentation, a package vignette and
regression tests for package mlt.
Author: Torsten Hothorn [aut, cre]
Maintainer: Torsten Hothorn <Torsten.Hothorn@R-project.org>
Diff between mlt.docreg versions 0.2-0 dated 2017-06-20 and 0.2-1 dated 2017-12-12
DESCRIPTION | 8 - MD5 | 20 +- build/vignette.rds |binary inst/NEWS.Rd | 6 inst/doc/mlt.R | 73 ++++----- inst/doc/mlt.Rnw | 334 +++++++++++++++++++++++------------------- inst/doc/mlt.pdf |binary tests/timedep_covar.Rout.save | 7 tests/udist-Ex.Rout.save | 8 - vignettes/mlt.Rnw | 334 +++++++++++++++++++++++------------------- vignettes/mlt.bib | 15 + 11 files changed, 445 insertions(+), 360 deletions(-)
Title: Linear Test Statistics for Permutation Inference
Description: Basic infrastructure for linear test statistics and permutation
inference in the framework of Strasser and Weber (1999) <http://epub.wu.ac.at/102/>.
This package must not be used by end-users. CRAN package 'coin' implements all
user interfaces and is ready to be used by anyone.
Author: Torsten Hothorn [aut, cre]
Maintainer: Torsten Hothorn <Torsten.Hothorn@R-project.org>
Diff between libcoin versions 0.9-3 dated 2017-07-03 and 1.0-0 dated 2017-12-12
libcoin-0.9-3/libcoin/src/Distributions.c |only libcoin-0.9-3/libcoin/src/Distributions.h |only libcoin-0.9-3/libcoin/src/LinearStatistic.c |only libcoin-0.9-3/libcoin/src/LinearStatistic.h |only libcoin-0.9-3/libcoin/src/MaxSelect.c |only libcoin-0.9-3/libcoin/src/MaxSelect.h |only libcoin-0.9-3/libcoin/src/MemoryAccess.c |only libcoin-0.9-3/libcoin/src/MemoryAccess.h |only libcoin-0.9-3/libcoin/src/R_LinearStatistic.c |only libcoin-0.9-3/libcoin/src/R_Tables.c |only libcoin-0.9-3/libcoin/src/R_Tests.c |only libcoin-0.9-3/libcoin/src/R_Utils.c |only libcoin-0.9-3/libcoin/src/Sums.c |only libcoin-0.9-3/libcoin/src/Sums.h |only libcoin-0.9-3/libcoin/src/Tables.c |only libcoin-0.9-3/libcoin/src/Tables.h |only libcoin-0.9-3/libcoin/src/TestStatistics.c |only libcoin-0.9-3/libcoin/src/TestStatistics.h |only libcoin-0.9-3/libcoin/src/Utils.c |only libcoin-0.9-3/libcoin/src/Utils.h |only libcoin-0.9-3/libcoin/src/libcoin-win.def |only libcoin-1.0-0/libcoin/DESCRIPTION | 9 libcoin-1.0-0/libcoin/MD5 | 72 - libcoin-1.0-0/libcoin/NAMESPACE | 5 libcoin-1.0-0/libcoin/R/AAA.R | 24 libcoin-1.0-0/libcoin/R/ctabs.R | 110 ++ libcoin-1.0-0/libcoin/R/libcoin.R | 355 ++++++--- libcoin-1.0-0/libcoin/build |only libcoin-1.0-0/libcoin/cleanup | 2 libcoin-1.0-0/libcoin/inst/NEWS.Rd | 8 libcoin-1.0-0/libcoin/inst/doc |only libcoin-1.0-0/libcoin/inst/include/libcoin.h | 525 +++++++++++--- libcoin-1.0-0/libcoin/inst/include/libcoinAPI.h | 88 +- libcoin-1.0-0/libcoin/inst/include/libcoin_internal.h | 90 +- libcoin-1.0-0/libcoin/inst/libcoin.bib |only libcoin-1.0-0/libcoin/man/LinStatExpCov.Rd | 48 - libcoin-1.0-0/libcoin/man/ctabs.Rd | 23 libcoin-1.0-0/libcoin/man/doTest.Rd | 40 - libcoin-1.0-0/libcoin/src/Makevars | 1 libcoin-1.0-0/libcoin/src/libcoin-init.c | 88 ++ libcoin-1.0-0/libcoin/src/libcoin.c |only libcoin-1.0-0/libcoin/src/libcoin.h | 525 +++++++++++--- libcoin-1.0-0/libcoin/src/libcoinAPI.h | 88 +- libcoin-1.0-0/libcoin/src/libcoin_internal.h | 90 +- libcoin-1.0-0/libcoin/tests/bugfixes.R | 3 libcoin-1.0-0/libcoin/tests/bugfixes.Rout.save | 151 +--- libcoin-1.0-0/libcoin/tests/libcoin.R |only libcoin-1.0-0/libcoin/tests/regtest_ctabs.Rout.save | 668 +++++++----------- libcoin-1.0-0/libcoin/tests/regtest_libcoin.R |only libcoin-1.0-0/libcoin/vignettes |only 50 files changed, 2021 insertions(+), 992 deletions(-)
Title: Text Cleaning Tools
Description: Tools to clean and process text. Tools are geared at checking for substrings
that are not optimal for analysis and replacing or removing them with more
analysis friendly substrings. For example, emoticons are often used in text but
not always easily handled by analysis algorithms. The 'replace_emoticon' function
replaces emoticons with word equivalents.
Author: Tyler Rinker [aut, cre]
Maintainer: Tyler Rinker <tyler.rinker@gmail.com>
Diff between textclean versions 0.3.1 dated 2017-02-22 and 0.5.1 dated 2017-12-12
textclean-0.3.1/textclean/inst/textclean_logo |only textclean-0.5.1/textclean/DESCRIPTION | 32 textclean-0.5.1/textclean/MD5 | 103 +- textclean-0.5.1/textclean/NAMESPACE | 14 textclean-0.5.1/textclean/NEWS | 42 + textclean-0.5.1/textclean/R/check_text.R | 19 textclean-0.5.1/textclean/R/drop_element.R |only textclean-0.5.1/textclean/R/drop_row.R |only textclean-0.5.1/textclean/R/filter_element.R | 8 textclean-0.5.1/textclean/R/filter_row.R | 7 textclean-0.5.1/textclean/R/make_plural.R |only textclean-0.5.1/textclean/R/mgsub.R | 35 textclean-0.5.1/textclean/R/replace_emoji.R |only textclean-0.5.1/textclean/R/replace_emoticon.R | 2 textclean-0.5.1/textclean/R/replace_grade.R | 3 textclean-0.5.1/textclean/R/replace_html.R | 9 textclean-0.5.1/textclean/R/replace_names.R |only textclean-0.5.1/textclean/R/replace_non_ascii.R | 35 textclean-0.5.1/textclean/R/replace_number.R | 2 textclean-0.5.1/textclean/R/replace_tokens.R | 2 textclean-0.5.1/textclean/R/utils.R | 7 textclean-0.5.1/textclean/README.md | 401 ++++++---- textclean-0.5.1/textclean/data/DATA.rda |binary textclean-0.5.1/textclean/inst/CITATION | 9 textclean-0.5.1/textclean/inst/docs |only textclean-0.5.1/textclean/man/DATA.Rd | 1 textclean-0.5.1/textclean/man/add_comma_space.Rd | 1 textclean-0.5.1/textclean/man/add_missing_endmark.Rd | 1 textclean-0.5.1/textclean/man/check_text.Rd | 8 textclean-0.5.1/textclean/man/drop_element.Rd |only textclean-0.5.1/textclean/man/drop_row.Rd |only textclean-0.5.1/textclean/man/filter_element.Rd | 1 textclean-0.5.1/textclean/man/filter_row.Rd | 5 textclean-0.5.1/textclean/man/has_endmark.Rd | 1 textclean-0.5.1/textclean/man/make_plural.Rd |only textclean-0.5.1/textclean/man/mgsub.Rd | 15 textclean-0.5.1/textclean/man/print.check_text.Rd | 1 textclean-0.5.1/textclean/man/print.sub_holder.Rd | 1 textclean-0.5.1/textclean/man/replace_contraction.Rd | 1 textclean-0.5.1/textclean/man/replace_emoji.Rd |only textclean-0.5.1/textclean/man/replace_emoticon.Rd | 3 textclean-0.5.1/textclean/man/replace_grade.Rd | 1 textclean-0.5.1/textclean/man/replace_html.Rd | 10 textclean-0.5.1/textclean/man/replace_incomplete.Rd | 1 textclean-0.5.1/textclean/man/replace_names.Rd |only textclean-0.5.1/textclean/man/replace_non_ascii.Rd | 19 textclean-0.5.1/textclean/man/replace_number.Rd | 3 textclean-0.5.1/textclean/man/replace_ordinal.Rd | 1 textclean-0.5.1/textclean/man/replace_rating.Rd | 1 textclean-0.5.1/textclean/man/replace_symbol.Rd | 1 textclean-0.5.1/textclean/man/replace_tokens.Rd | 3 textclean-0.5.1/textclean/man/replace_white.Rd | 1 textclean-0.5.1/textclean/man/strip.Rd | 3 textclean-0.5.1/textclean/man/sub_holder.Rd | 1 textclean-0.5.1/textclean/man/swap.Rd | 1 textclean-0.5.1/textclean/man/textclean.Rd | 3 textclean-0.5.1/textclean/tests/testthat/test-replace_grade.R | 6 textclean-0.5.1/textclean/tools |only 58 files changed, 537 insertions(+), 287 deletions(-)
Title: Distance and Similarity Measures
Description: Provides an extensible framework for the efficient calculation of auto- and cross-proximities, along with implementations of the most popular ones.
Author: David Meyer [aut, cre],
Christian Buchta [aut]
Maintainer: David Meyer <David.Meyer@R-project.org>
Diff between proxy versions 0.4-19 dated 2017-10-29 and 0.4-20 dated 2017-12-12
DESCRIPTION | 6 +++--- MD5 | 14 +++++++------- NAMESPACE | 1 + R/dist.R | 39 +++++++++++++++++++++++++++++++-------- build/vignette.rds |binary inst/NEWS.Rd | 6 ++++++ inst/doc/overview.pdf |binary man/dist.Rd | 7 +++++-- 8 files changed, 53 insertions(+), 20 deletions(-)
Title: Provides Iterator Construct for R
Description: Support for iterators, which allow a programmer to traverse
through all the elements of a vector, list, or other collection
of data.
Author: Rich Calaway [cre],
Revolution Analytics [aut, cph],
Steve Weston [aut]
Maintainer: Rich Calaway <richcala@microsoft.com>
Diff between iterators versions 1.0.8 dated 2015-10-13 and 1.0.9 dated 2017-12-12
DESCRIPTION | 10 +++++----- MD5 | 10 +++++----- build/vignette.rds |binary inst/doc/iterators.pdf |binary inst/doc/writing.pdf |binary tests/doRUnit.R | 2 +- 6 files changed, 11 insertions(+), 11 deletions(-)
Title: Handy File and String Manipulation
Description: Convenient functions for moving files, deleting directories,
and a variety of string operations that facilitate manipulating files
and extracting information from strings.
Author: Rory Nolan [aut, cre, cph],
Sergi Padilla-Parra [ths]
Maintainer: Rory Nolan <rorynoolan@gmail.com>
Diff between filesstrings versions 2.0.0 dated 2017-12-01 and 2.0.1 dated 2017-12-12
DESCRIPTION | 6 +++--- MD5 | 28 ++++++++++++++-------------- NEWS.md | 6 ++++++ R/files.R | 28 ++++++++++++++-------------- README.md | 2 +- build/partial.rdb |binary inst/doc/files.html | 4 ++-- inst/doc/strings.html | 4 ++-- man/create_dir.Rd | 4 ++-- man/move_files.Rd | 4 ++-- man/nice_file_nums.Rd | 4 ++-- man/remove_dir.Rd | 4 ++-- man/remove_filename_spaces.Rd | 4 ++-- man/rename_with_nums.Rd | 4 ++-- man/unitize_dirs.Rd | 4 ++-- 15 files changed, 56 insertions(+), 50 deletions(-)
Title: Space-Time Point Pattern Simulation, Visualisation and Analysis
Description: Many of the models encountered in applications of point process methods to the study of spatio-temporal phenomena are covered in 'stpp'. This package provides statistical tools for analyzing the global and local second-order properties of spatio-temporal point processes, including estimators of the space-time inhomogeneous K-function and pair correlation function. It also includes tools to get static and dynamic display of spatio-temporal point patterns. See Gabriel et al (2013) <doi:10.18637/jss.v053.i02>.
Author: Edith Gabriel [aut, cre],
Peter J Diggle [aut],
Barry Rowlingson [aut],
Francisco J Rodriguez-Cortes [aut]
Maintainer: Edith Gabriel <edith.gabriel@univ-avignon.fr>
Diff between stpp versions 2.0-1 dated 2017-11-28 and 2.0-2 dated 2017-12-12
DESCRIPTION | 10 +- MD5 | 32 +++--- NAMESPACE | 2 R/plot.stpp.R | 12 +- R/rlgcp.R | 3 build/vignette.rds |binary inst/doc/docs.html | 259 +++++++++++++++++++++++++++++++++++++--------------- man/STIKhat.Rd | 2 man/fmd.Rd | 46 ++++----- man/plotPCF.Rd | 2 man/stpp-package.Rd | 4 src/astk.f | 4 src/circ.f | 13 +- src/covst.f | 2 src/listafunction.f | 2 src/pcffunction.f | 49 +++++---- src/stikfunction.f | 59 +++++------ 17 files changed, 314 insertions(+), 187 deletions(-)
Title: Help for Writing Unit Tests Based on Function Examples
Description: Take the examples written in your documentation of functions and
use them to create shells (skeletons which must be manually completed by
the user) of test files to be tested with the 'testthat' package.
Author: Rory Nolan [aut, cre],
Sergi Padilla-Parra [ths]
Maintainer: Rory Nolan <rorynoolan@gmail.com>
Diff between exampletestr versions 1.1.0 dated 2017-12-03 and 1.1.1 dated 2017-12-12
DESCRIPTION | 6 +++--- MD5 | 20 ++++++++++---------- NEWS.md | 6 ++++++ R/exemplar.R | 11 +++++------ R/utils.R | 15 +++++---------- README.md | 2 +- inst/doc/exampletestr.html | 8 ++++---- man/extract_examples.Rd | 3 +-- man/extract_expressions.Rd | 6 +++--- man/make_test_shell.Rd | 4 ++-- man/make_tests_shells_file.Rd | 4 ++-- 11 files changed, 42 insertions(+), 43 deletions(-)
Title: Chart Generation for 'Microsoft Word' and 'Microsoft PowerPoint'
Documents
Description: Create native charts for 'Microsoft PowerPoint' and 'Microsoft Word' documents.
These can then be edited and annotated. Functions are provided to let users create charts, modify
and format their content. The chart's underlying data is automatically saved within the
'Word' document or 'PowerPoint' presentation. It extends package 'officer' that does
not contain any feature for 'Microsoft' native charts production.
Author: David Gohel [aut, cre],
YouGov [fnd]
Maintainer: David Gohel <david.gohel@ardata.fr>
Diff between mschart versions 0.2.1 dated 2017-09-15 and 0.2.2 dated 2017-12-12
mschart-0.2.1/mschart/man/chart_ax_y.Rd |only mschart-0.2.2/mschart/DESCRIPTION | 14 mschart-0.2.2/mschart/MD5 | 81 +++-- mschart-0.2.2/mschart/NAMESPACE | 4 mschart-0.2.2/mschart/NEWS.md | 16 mschart-0.2.2/mschart/R/axis_codes.R | 4 mschart-0.2.2/mschart/R/axis_setting.R | 55 ++- mschart-0.2.2/mschart/R/body_add_chart.R | 2 mschart-0.2.2/mschart/R/chart_data_color.R | 47 ++ mschart-0.2.2/mschart/R/chart_data_labels.R | 5 mschart-0.2.2/mschart/R/chart_settings.R | 13 mschart-0.2.2/mschart/R/ms_chart.R | 45 +- mschart-0.2.2/mschart/R/ooml_code.R | 120 +++++-- mschart-0.2.2/mschart/R/ph_with_chart.R | 2 mschart-0.2.2/mschart/R/series.R | 15 mschart-0.2.2/mschart/R/simple_types.R | 2 mschart-0.2.2/mschart/R/theme.R | 18 - mschart-0.2.2/mschart/R/utils.R | 15 mschart-0.2.2/mschart/README.md | 51 ++- mschart-0.2.2/mschart/build/vignette.rds |binary mschart-0.2.2/mschart/inst/doc/details.R |only mschart-0.2.2/mschart/inst/doc/details.Rmd |only mschart-0.2.2/mschart/inst/doc/details.html |only mschart-0.2.2/mschart/inst/doc/introduction.R | 98 ------ mschart-0.2.2/mschart/inst/doc/introduction.Rmd | 156 --------- mschart-0.2.2/mschart/inst/doc/introduction.html | 194 ------------ mschart-0.2.2/mschart/inst/ressources/model_labels_pos.pptx |only mschart-0.2.2/mschart/inst/ressources/read_xsd.R | 2 mschart-0.2.2/mschart/man/chart_ax_x.Rd | 63 +++ mschart-0.2.2/mschart/man/chart_data_labels.Rd | 7 mschart-0.2.2/mschart/man/chart_data_line_width.Rd |only mschart-0.2.2/mschart/man/chart_data_stroke.Rd | 4 mschart-0.2.2/mschart/man/chart_settings.Rd | 2 mschart-0.2.2/mschart/man/set_theme.Rd | 16 mschart-0.2.2/mschart/vignettes/assets |only mschart-0.2.2/mschart/vignettes/details.Rmd |only mschart-0.2.2/mschart/vignettes/introduction.Rmd | 156 --------- 37 files changed, 473 insertions(+), 734 deletions(-)
Title: Data from the GLM Book by Dobson and Barnett
Description: Example datasets from the book "An Introduction to Generalised Linear Models" (Year: 2008, ISBN:9781584889502) by Dobson and Barnett. The data were read into R from the 'Excel' files available here: <https://www.crcpress.com/downloads/C9500/GLM_data.zip>.
Author: Adrian Barnett [aut, cre]
Maintainer: Adrian Barnett <a.barnett@qut.edu.au>
Diff between dobson versions 0.1 dated 2017-10-09 and 0.2 dated 2017-12-12
DESCRIPTION | 6 +++--- MD5 | 2 +- 2 files changed, 4 insertions(+), 4 deletions(-)
Title: Sets, Generalized Sets, Customizable Sets and Intervals
Description: Data structures and basic operations for ordinary sets,
generalizations such as fuzzy sets, multisets, and
fuzzy multisets, customizable sets, and intervals.
Author: David Meyer [aut, cre],
Kurt Hornik [aut],
Christian Buchta [ctb]
Maintainer: David Meyer <David.Meyer@R-project.org>
Diff between sets versions 1.0-17 dated 2017-03-07 and 1.0-18 dated 2017-12-12
DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ NAMESPACE | 2 +- build/vignette.rds |binary data/fuzzy_docs.rda |binary inst/NEWS.Rd | 6 ++++++ inst/doc/sets.pdf |binary 7 files changed, 16 insertions(+), 10 deletions(-)
Title: Generate Recursive Mazes
Description: Supports the generation of parallelogram, equilateral
triangle, regular hexagon, isosceles trapezoid, Koch snowflake,
'hexaflake', Sierpinski triangle, Sierpinski carpet and Sierpinski
trapezoid mazes via 'TurtleGraphics'. Mazes are generated by the recursive method:
the domain is divided into sub-domains in which mazes are generated,
then dividing lines with holes are drawn between them, see
J. Buck, Recursive Division, <http://weblog.jamisbuck.org/2011/1/12/maze-generation-recursive-division-algorithm>.
Author: Steven E. Pav [aut, cre] (0000-0002-4197-6195)
Maintainer: Steven E. Pav <shabbychef@gmail.com>
Diff between mazealls versions 0.1.0 dated 2017-11-14 and 0.2.0 dated 2017-12-12
ChangeLog | 13 DESCRIPTION | 20 - MD5 | 113 ++++-- NAMESPACE | 7 R/decagon_maze.r |only R/dodecagon_maze.r |only R/eq_triangle_maze.r | 41 +- R/hexaflake_maze.r |only R/hexagon_maze.r | 33 + R/holey_line.r | 20 + R/holey_path.r | 30 + R/iso_trapezoid_maze.r | 145 +++----- R/koch_maze.r | 82 +++- R/mazealls.r | 13 R/octagon_maze.r |only R/parallelogram_maze.r | 82 +++- R/sierpinski_carpet_maze.r |only R/sierpinski_maze.r |only R/sierpinski_trapezoid_maze.r |only R/utils.r | 102 +++++ README.md | 564 +++++++++++++++++++++++++++++++- man/NEWS.Rd | 12 man/decagon_maze.Rd |only man/dodecagon_maze.Rd |only man/eq_triangle_maze.Rd | 35 + man/figures/boundary-stuff-1.png |binary man/figures/eq-tri-four-tri-1.png |binary man/figures/eq-tri-hex-and-three-1.png |binary man/figures/eq-tri-shave-1.png |binary man/figures/eq-tri-shave-all-1.png |binary man/figures/eq-tri-stack-1.png |binary man/figures/eq-tri-two-ears-1.png |binary man/figures/eq-tri-uniform-1.png |binary man/figures/hex-parallelo-1.png |binary man/figures/hex-spiral-1.png |only man/figures/hex-trapezoids-1.png |binary man/figures/hex-triangles-1.png |binary man/figures/hexaflake-1.png |only man/figures/koch-flake-1.png |binary man/figures/koch-meta-flake-1.png |only man/figures/menger-sponge-1.png |only man/figures/para-imbalance-fade-1.png |binary man/figures/para-maze-1.png |binary man/figures/rect-boustrophedon-1.png |only man/figures/rect-double-spiral-1.png |only man/figures/rect-spiral-1.png |only man/figures/sierpinski-1.png |only man/figures/sierpinski-carpet-1.png |only man/figures/sierpinski-trapezoids-1.png |only man/figures/simple-decagon-1.png |only man/figures/simple-dodecagon-1.png |only man/figures/simple-octagon-1.png |only man/figures/tileit-1.png |binary man/figures/trap-ear-1.png |binary man/figures/trap-four-1.png |binary man/figures/tree-thing-1.png |only man/figures/tri-of-hex-1.png |binary man/figures/unit-len-stack-trap-1.png |binary man/hexaflake_maze.Rd |only man/hexagon_maze.Rd | 38 +- man/holey_line.Rd | 12 man/holey_path.Rd | 17 man/iso_trapezoid_maze.Rd | 41 ++ man/koch_maze.Rd | 25 + man/mazealls.Rd | 3 man/octagon_maze.Rd |only man/parallelogram_maze.Rd | 51 ++ man/sierpinski_carpet_maze.Rd |only man/sierpinski_maze.Rd |only man/sierpinski_trapezoid_maze.Rd |only tests/testthat |only tests/testthat.R | 2 72 files changed, 1252 insertions(+), 249 deletions(-)
Title: Read Text Documents into R
Description: A small collection of convenience tools for reading text documents into R.
Author: Tyler Rinker [aut, cre],
Bryan Goodrich [ctb]
Maintainer: Tyler Rinker <tyler.rinker@gmail.com>
Diff between textreadr versions 0.5.1 dated 2017-04-30 and 0.7.0 dated 2017-12-12
DESCRIPTION | 19 ++--- MD5 | 60 +++++++++--------- NAMESPACE | 3 NEWS | 32 +++++++++ R/as_transcript.R |only R/read_dir.R | 35 +++++++--- R/read_dir_transcript.R | 23 +++++- R/read_doc.R | 2 R/read_document.R | 36 ++++++++-- R/read_docx.R | 2 R/read_html.R | 2 R/read_pdf.R | 4 - R/read_rtf.R |only R/read_transcript.R | 80 ++++++++++++++++++------ R/utils.R | 66 ++++++++++++------- README.md | 123 ++++++++++++++++++++++++++----------- data/presidential_debates_2012.rda |binary inst/CITATION | 5 - man/as_transcript.Rd |only man/download.Rd | 1 man/peek.Rd | 1 man/presidential_debates_2012.Rd | 1 man/print.textreadr.Rd | 1 man/read_dir.Rd | 6 + man/read_dir_transcript.Rd | 8 +- man/read_doc.Rd | 3 man/read_document.Rd | 24 ++++++- man/read_docx.Rd | 3 man/read_html.Rd | 3 man/read_pdf.Rd | 5 - man/read_rtf.Rd |only man/read_transcript.Rd | 20 ++++-- man/textreadr.Rd | 3 33 files changed, 395 insertions(+), 176 deletions(-)