Title: Personalizes and Randomizes Exams Written in 'LaTeX'
Description: Randomizing exams with 'LaTeX'.
If you can compile your main document with 'LaTeX', the program should be able to compile the randomized
versions without much extra effort when creating the document.
Author: Alejandro Gonzalez Recuenco
Maintainer: Alejandro Gonzalez Recuenco <alejandrogonzalezrecuenco@gmail.com>
Diff between TexExamRandomizer versions 1.2.2 dated 2017-11-27 and 1.2.3 dated 2018-02-12
DESCRIPTION | 10 MD5 | 20 NAMESPACE | 1 R/latexmkCompilation.R | 65 +- build/vignette.rds |binary inst/doc/BasicUse.Rmd | 2 inst/doc/BasicUse.html | 557 ++++++++----------- inst/doc/ExamOptions.html | 696 ++++++++++++------------ inst/doc/GradingExams.html | 1261 +++++++++++++++++++++------------------------ man/CompileLatexDir.Rd | 19 vignettes/BasicUse.Rmd | 2 11 files changed, 1255 insertions(+), 1378 deletions(-)
More information about TexExamRandomizer at CRAN
Permanent link
Title: R Interface to Global Biotic Interactions
Description: A programmatic interface to the web service methods
provided by Global Biotic Interactions (GloBI). GloBI provides
access to spatial-temporal species interaction records from
sources all over the world. rglobi provides methods to search
species interactions by location, interaction type, and
taxonomic name. In addition, it supports Cypher, a graph query
language, to allow for executing custom queries on the GloBI
aggregate species interaction data set.
Author: Jorrit Poelen [aut, cre],
Stephen Gosnell [aut],
Sergey Slyusarev [aut]
Maintainer: Jorrit Poelen <jhpoelen@xs4all.nl>
Diff between rglobi versions 0.2.11 dated 2017-10-14 and 0.2.12 dated 2018-02-12
DESCRIPTION | 8 ++++---- MD5 | 16 ++++++++-------- NEWS | 9 +++++++++ README.md | 2 +- build/vignette.rds |binary inst/doc/rglobi_vignette.Rmd | 30 +++++++++++++++++++++++++++--- inst/doc/rglobi_vignette.html | 27 ++++++++++++++++++++++++--- tests/testthat/test-globi.R | 2 +- vignettes/rglobi_vignette.Rmd | 30 +++++++++++++++++++++++++++--- 9 files changed, 101 insertions(+), 23 deletions(-)
Title: The EM Algorithm and Skew Mixture Distribution
Description: EM algorithm for Fitting Mixture of Multivariate Skew Normal and Skew t Distributions. An implementation of the algorithm described in Wang, Ng, and McLachlan (2009) <doi:10.1109/DICTA.2009.88>.
Author: Kui Wang, Angus Ng and Geoff McLachlan.
Maintainer: Sharon Lee <s.lee11@uq.edu.au>
Diff between EMMIXskew versions 1.0.2 dated 2017-05-08 and 1.0.3 dated 2018-02-12
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- src/EMMIXskew_init.c | 4 ++-- src/Makevars | 2 +- src/density2.f | 2 +- 5 files changed, 12 insertions(+), 12 deletions(-)
Title: Visualization Package for CanvasXpress in R
Description: Enables creation of visualizations using the CanvasXpress framework
in R. CanvasXpress is a standalone JavaScript library for reproducible research
with complete tracking of data and end-user modifications stored in a single
PNG image that can be played back. See <http://canvasxpress.org> for more
information.
Author: Isaac Neuhaus [aut, cre],
Connie Brett [ctb]
Maintainer: Connie Brett <connie@aggregate-genius.com>
Diff between canvasXpress versions 1.18.3 dated 2018-02-01 and 1.18.5 dated 2018-02-12
DESCRIPTION | 6 MD5 | 30 ++-- NEWS.md | 4 README.md | 5 inst/doc/additional_examples.html | 4 inst/doc/getting_started.html | 4 inst/extdata/cX-networkbasic-edges.txt | 4 inst/extdata/cX-networkbasic-nodes.txt | 12 - inst/extdata/cX-wpapoptosis-edges.txt | 134 +++++++++--------- inst/extdata/cX-wpapoptosis-nodes.txt | 32 ++-- inst/htmlwidgets/canvasXpress.js | 8 - inst/htmlwidgets/canvasXpress.yaml | 2 inst/htmlwidgets/lib/canvasXpress/canvasXpress.css | 33 ++++ inst/htmlwidgets/lib/canvasXpress/canvasXpress.min.js | 4 tests/cX-function.R | 40 +++++ tests/testthat/test-circular.R | 16 ++ 16 files changed, 215 insertions(+), 123 deletions(-)
Title: Biodiversity Data Visualizations
Description: Provides a set of functions to create basic visualizations to quickly
preview different aspects of biodiversity information such as inventory
completeness, extent of coverage (taxonomic, temporal and geographic), gaps
and biases.
Author: Vijay Barve <vijay.barve@gmail.com>, Javier Otegui
<javier.otegui@gmail.com>
Maintainer: Vijay Barve <vijay.barve@gmail.com>
Diff between bdvis versions 0.2.18 dated 2017-07-20 and 0.2.20 dated 2018-02-12
DESCRIPTION | 8 +++---- MD5 | 14 ++++++------- NEWS | 4 +++ R/gettaxo.R | 60 ++++++++++++++++++++++++++++++--------------------------- R/mapgrid.R | 3 -- README.md | 32 +++++------------------------- man/gettaxo.Rd | 6 +++-- man/mapgrid.Rd | 3 -- 8 files changed, 59 insertions(+), 71 deletions(-)
Title: Weighted Correlation Network Analysis
Description: Functions necessary to perform Weighted Correlation Network Analysis on high-dimensional data. Includes functions for rudimentary data cleaning, construction of correlation networks, module identification, summarization, and relating of variables and modules to sample traits. Also includes a number of utility functions for data manipulation and visualization.
Author: Peter Langfelder <Peter.Langfelder@gmail.com> and Steve Horvath <SHorvath@mednet.ucla.edu> with contributions by Chaochao Cai, Jun Dong, Jeremy Miller, Lin Song, Andy Yip, and Bin Zhang
Maintainer: Peter Langfelder <Peter.Langfelder@gmail.com>
Diff between WGCNA versions 1.61 dated 2017-08-05 and 1.62 dated 2018-02-12
WGCNA-1.61/WGCNA/src/corFunctions-common.c |only WGCNA-1.61/WGCNA/src/corFunctions-common.h |only WGCNA-1.61/WGCNA/src/corFunctions-unified.c |only WGCNA-1.62/WGCNA/Changelog | 52 WGCNA-1.62/WGCNA/DESCRIPTION | 8 WGCNA-1.62/WGCNA/MD5 | 101 - WGCNA-1.62/WGCNA/R/Functions.R | 555 +++++-- WGCNA-1.62/WGCNA/R/blockwiseData.R |only WGCNA-1.62/WGCNA/R/blockwiseModulesC.R | 260 +-- WGCNA-1.62/WGCNA/R/consensusCalculations.R |only WGCNA-1.62/WGCNA/R/consensusTOM.R | 915 ------------ WGCNA-1.62/WGCNA/R/corFunctions.R | 74 WGCNA-1.62/WGCNA/R/heatmapWithLegend.R | 25 WGCNA-1.62/WGCNA/R/hierarchicalConsensusModules.R | 592 ++++--- WGCNA-1.62/WGCNA/R/internalConstants.R | 3 WGCNA-1.62/WGCNA/R/modulePreservation.R | 4 WGCNA-1.62/WGCNA/R/sampledModules.R | 18 WGCNA-1.62/WGCNA/man/TOMsimilarity.Rd | 26 WGCNA-1.62/WGCNA/man/TOMsimilarityFromExpr.Rd | 12 WGCNA-1.62/WGCNA/man/adjacency.Rd | 15 WGCNA-1.62/WGCNA/man/blockwiseIndividualTOMs.Rd | 11 WGCNA-1.62/WGCNA/man/blockwiseModules.Rd | 12 WGCNA-1.62/WGCNA/man/cor.Rd | 16 WGCNA-1.62/WGCNA/man/goodGenes.Rd | 35 WGCNA-1.62/WGCNA/man/goodGenesMS.Rd | 33 WGCNA-1.62/WGCNA/man/goodSamples.Rd | 26 WGCNA-1.62/WGCNA/man/goodSamplesGenes.Rd | 19 WGCNA-1.62/WGCNA/man/goodSamplesGenesMS.Rd | 20 WGCNA-1.62/WGCNA/man/goodSamplesMS.Rd | 12 WGCNA-1.62/WGCNA/man/hierarchicalConsensusKME.Rd | 12 WGCNA-1.62/WGCNA/man/hierarchicalConsensusModules.Rd | 17 WGCNA-1.62/WGCNA/man/hierarchicalConsensusTOM.Rd | 5 WGCNA-1.62/WGCNA/man/hierarchicalMergeCloseModules.Rd | 16 WGCNA-1.62/WGCNA/man/imputeByModule.Rd |only WGCNA-1.62/WGCNA/man/individualTOMs.Rd | 4 WGCNA-1.62/WGCNA/man/intramodularConnectivity.Rd | 6 WGCNA-1.62/WGCNA/man/labeledHeatmap.Rd | 11 WGCNA-1.62/WGCNA/man/newNetworkOptions.Rd | 14 WGCNA-1.62/WGCNA/man/pickSoftThreshold.Rd | 5 WGCNA-1.62/WGCNA/man/plotNetworkHeatmap.Rd | 5 WGCNA-1.62/WGCNA/man/pruneAndMergeConsensusModules.Rd |only WGCNA-1.62/WGCNA/man/pruneConsensusModules.Rd |only WGCNA-1.62/WGCNA/man/sampledHierarchicalConsensusModules.Rd | 8 WGCNA-1.62/WGCNA/man/softConnectivity.Rd | 5 WGCNA-1.62/WGCNA/man/subsetTOM.Rd | 6 WGCNA-1.62/WGCNA/src/array.h | 2 WGCNA-1.62/WGCNA/src/conditionalThreading.h |only WGCNA-1.62/WGCNA/src/corFunctions-typeDefs.h |only WGCNA-1.62/WGCNA/src/corFunctions-utils.c |only WGCNA-1.62/WGCNA/src/corFunctions-utils.h |only WGCNA-1.62/WGCNA/src/corFunctions.c |only WGCNA-1.62/WGCNA/src/corFunctions.h | 6 WGCNA-1.62/WGCNA/src/myMatrixMultiplication.c |only WGCNA-1.62/WGCNA/src/myMatrixMultiplication.h |only WGCNA-1.62/WGCNA/src/networkFunctions.c | 168 +- WGCNA-1.62/WGCNA/src/parallelQuantile.cc | 2 WGCNA-1.62/WGCNA/src/parallelQuantile.h | 2 WGCNA-1.62/WGCNA/src/pivot.c | 114 + WGCNA-1.62/WGCNA/src/pivot.h | 1 59 files changed, 1679 insertions(+), 1574 deletions(-)
Title: Continuous-Lag Spatial Markov Chains
Description: A set of functions is provided for 1) the stratum lengths analysis along a chosen direction, 2) fast estimation of continuous lag spatial Markov chains model parameters and probability computing (also for large data sets), 3) transition probability maps and transiograms drawing, 4) simulation methods for categorical random fields.
Author: Luca Sartore
Maintainer: Luca Sartore <drwolf85@gmail.com>
Diff between spMC versions 0.3.8 dated 2016-10-22 and 0.3.9 dated 2018-02-12
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- NAMESPACE | 2 +- NEWS | 9 +++++++++ inst/CITATION | 4 ++-- man/spMC-package.Rd | 4 ++-- src/Makevars | 2 +- src/spMC.h | 8 ++++++++ 8 files changed, 34 insertions(+), 17 deletions(-)
Title: Ratio-of-Uniforms Sampling for Bayesian Extreme Value Analysis
Description: Provides functions for the Bayesian analysis of extreme value
models. The 'rust' package <https://cran.r-project.org/package=rust> is
used to simulate a random sample from the required posterior distribution.
The functionality of 'revdbayes' is similar to the 'evdbayes' package
<https://cran.r-project.org/package=evdbayes>, which uses Markov Chain
Monte Carlo ('MCMC') methods for posterior simulation. Also provided
are functions for making inferences about the extremal index, using
the K-gaps model of Suveges and Davison (2010) <doi:10.1214/09-AOAS292>.
Author: Paul J. Northrop [aut, cre, cph]
Maintainer: Paul J. Northrop <p.northrop@ucl.ac.uk>
Diff between revdbayes versions 1.3.1 dated 2017-11-01 and 1.3.2 dated 2018-02-12
DESCRIPTION | 14 +--- MD5 | 35 +++++------ NEWS.md | 10 +++ R/bayesplot.R | 16 ++++- R/distributions.R | 89 ++++++++++++++++++---------- R/kgaps.R | 38 ++++++++++- R/ts_post.R |only inst/doc/revdbayes-kgaps-vignette.html | 6 - inst/doc/revdbayes-predictive-vignette.html | 13 ++-- inst/doc/revdbayes-using-rcpp-vignette.html | 38 +++++------ inst/doc/revdbayes-vignette.R | 16 ----- inst/doc/revdbayes-vignette.Rmd | 21 +----- inst/doc/revdbayes-vignette.html | 60 +++++++----------- man/gev.Rd | 15 ++-- man/gp.Rd | 15 ++-- man/kgaps_post.Rd | 4 - man/pp_check.evpost.Rd | 18 ++++- vignettes/revdbayes-vignette.Rmd | 21 +----- vignettes/revdbayes.bib | 21 +++++- 19 files changed, 252 insertions(+), 198 deletions(-)
Title: Integer Calibration
Description: Specific functions are provided for rounding real weights to integers and performing an integer programming algorithm for calibration problems. They are useful for census-weights adjustments, or for performing linear regression with integer parameters.
Author: Luca Sartore <luca.sartore@nass.usda.gov> and Kelly Toppin <kelly.toppin@nass.usda.gov>
Maintainer: Luca Sartore <drwolf85@gmail.com>
Diff between inca versions 0.0.2 dated 2016-11-03 and 0.0.3 dated 2018-02-12
ChangeLog | 14 ++++++++++++++ DESCRIPTION | 18 +++++++----------- MD5 | 22 +++++++++++----------- NAMESPACE | 2 +- R/inca.R | 6 +++--- README.md | 2 -- inst/INSTALL.md | 4 ++-- man/adjWeights.Rd | 1 - man/inca-package.Rd | 17 ++++++++--------- man/intcalibrate.Rd | 1 - man/roundWeights.Rd | 1 - src/inca.cpp | 5 +++++ 12 files changed, 51 insertions(+), 42 deletions(-)
Title: TIFF I/O for 'ImageJ' Users
Description: Correctly import TIFF files that were saved from 'ImageJ' and write
TIFF files than can be correctly read by 'ImageJ'
<https://imagej.nih.gov/ij/>. Full support for TIFF files with floating
point (real-numbered) pixels. Also supports text image I/O.
Author: Rory Nolan [aut, cre],
Simon Urbanek [ctb],
Sergi Padilla-Parra [ths]
Maintainer: Rory Nolan <rorynoolan@gmail.com>
Diff between ijtiff versions 0.2.0 dated 2017-12-19 and 0.3.0 dated 2018-02-12
ijtiff-0.2.0/ijtiff/README.md |only ijtiff-0.3.0/ijtiff/DESCRIPTION | 14 ijtiff-0.3.0/ijtiff/MD5 | 57 - ijtiff-0.3.0/ijtiff/NAMESPACE | 2 ijtiff-0.3.0/ijtiff/NEWS.md | 14 ijtiff-0.3.0/ijtiff/R/class_constructors.R | 7 ijtiff-0.3.0/ijtiff/R/graphics.R | 7 ijtiff-0.3.0/ijtiff/R/ijtiff.R | 22 ijtiff-0.3.0/ijtiff/R/read.R | 88 + ijtiff-0.3.0/ijtiff/R/utils.R | 25 ijtiff-0.3.0/ijtiff/R/write.R | 5 ijtiff-0.3.0/ijtiff/data |only ijtiff-0.3.0/ijtiff/inst/doc/ijtiff.Rmd | 93 +- ijtiff-0.3.0/ijtiff/inst/doc/ijtiff.html | 503 ++++++++--- ijtiff-0.3.0/ijtiff/inst/extdata |only ijtiff-0.3.0/ijtiff/inst/img/2ch_ij.tif |binary ijtiff-0.3.0/ijtiff/inst/img/Rlogo-banana-1-2.tif |only ijtiff-0.3.0/ijtiff/inst/img/Rlogo-banana-red.tif |only ijtiff-0.3.0/ijtiff/inst/img/Rlogo-banana-red_green.tif |only ijtiff-0.3.0/ijtiff/inst/img/Rlogo-banana-red_green_blue.tif |only ijtiff-0.3.0/ijtiff/inst/img/Rlogo-banana.gif |only ijtiff-0.3.0/ijtiff/inst/img/bad_ij1.tif |only ijtiff-0.3.0/ijtiff/inst/img/bad_ij2.tif |only ijtiff-0.3.0/ijtiff/inst/img/bad_ij3.tif |only ijtiff-0.3.0/ijtiff/man/display.Rd | 4 ijtiff-0.3.0/ijtiff/man/read_tif.Rd | 1 ijtiff-0.3.0/ijtiff/man/tiff_tag_data.Rd |only ijtiff-0.3.0/ijtiff/src/Makevars.win | 19 ijtiff-0.3.0/ijtiff/src/common.c | 7 ijtiff-0.3.0/ijtiff/src/common.h | 8 ijtiff-0.3.0/ijtiff/src/read.c | 187 ++-- ijtiff-0.3.0/ijtiff/tests/testthat/test_graphics.R | 8 ijtiff-0.3.0/ijtiff/tests/testthat/test_io.R | 168 +-- ijtiff-0.3.0/ijtiff/tests/testthat/test_utils.R | 12 ijtiff-0.3.0/ijtiff/tools |only ijtiff-0.3.0/ijtiff/vignettes/ijtiff.Rmd | 93 +- 36 files changed, 937 insertions(+), 407 deletions(-)
Title: Generalized UniFrac Distances
Description: Generalized UniFrac distances for comparing microbial communities. Permutational multivariate analysis of variance using multiple distance matrices.
Author: Jun Chen
Maintainer: Jun Chen <chen.jun2@mayo.edu>
Diff between GUniFrac versions 1.0 dated 2012-04-28 and 1.1 dated 2018-02-12
DESCRIPTION | 23 +++++------ MD5 | 14 +++---- NAMESPACE | 15 ++----- R/GUniFrac.R | 94 ++++++++++++++++++++++++++++++------------------ man/GUniFrac-package.Rd | 27 +++++++------ man/GUniFrac.Rd | 24 +++++------- man/PermanovaG.Rd | 21 ++++++---- man/Rarefy.Rd | 10 +++-- 8 files changed, 127 insertions(+), 101 deletions(-)
Title: Analysis of Codon Data under Stationarity using a Bayesian
Framework
Description: Is a collection of models to analyze genome scale codon
data using a Bayesian framework. Provides visualization
routines and checkpointing for model fittings. Currently
published models to analyze gene data for selection on codon
usage based on Ribosome Overhead Cost (ROC) are: ROC (Gilchrist
et al. (2015) <doi:10.1093/gbe/evv087>), and ROC with phi
(Wallace & Drummond (2013) <doi:10.1093/molbev/mst051>). In
addition 'AnaCoDa' contains three currently unpublished models.
The FONSE (First order approximation On NonSense Error) model
analyzes gene data for selection on codon usage against of
nonsense error rates. The PA (PAusing time) and PANSE (PAusing
time + NonSense Error) models use ribosome footprinting data to
analyze estimate ribosome pausing times with and without
nonsense error rate from ribosome footprinting data.
Author: Cedric Landerer [aut, cre],
Gabriel Hanas [ctb],
Jeremy Rogers [ctb],
Alex Cope [ctb]
Maintainer: Cedric Landerer <cedric.landerer@gmail.com>
Diff between AnaCoDa versions 0.1.0 dated 2018-01-11 and 0.1.1 dated 2018-02-12
DESCRIPTION | 35 ++-- MD5 | 68 +++++---- NAMESPACE | 6 NEWS.md | 14 + R/genomeObject.R | 206 ++++++++++++++++++++++++++++ R/parameterObject.R | 264 +++++++++++++++++++++++++++++++++---- R/plotModelObject.R | 4 R/plotParameterObject.R | 19 +- inst/doc/anacoda.Rmd | 88 ++++++++++-- inst/doc/anacoda.bib | 20 ++ inst/doc/anacoda.html | 83 +++++++++-- inst/doc/sel_cai_comp.png |only man/acfCSP.Rd | 2 man/addObservedSynthesisRateSet.Rd | 5 man/getCAI.Rd |only man/getCAIweights.Rd |only man/getCSPEstimates.Rd | 2 man/getCodonCountsForAA.Rd | 3 man/getNc.Rd |only man/getNcAA.Rd |only man/getObservedSynthesisRateSet.Rd | 2 man/getSelectionCoefficients.Rd |only man/initializeParameterObject.Rd | 8 - src/Gene.cpp | 10 - src/Genome.cpp | 28 +++ src/PAModel.cpp | 7 src/PAParameter.cpp | 4 src/Parameter.cpp | 112 +++++++-------- src/RCPP_Parameter.cpp | 2 src/Testing.cpp | 16 -- src/Trace.cpp | 67 ++------- src/include/Gene.h | 2 src/include/Genome.h | 1 src/include/PA/PAParameter.h | 2 src/include/Testing.h | 2 src/include/base/Parameter.h | 24 +-- src/include/base/Trace.h | 2 tests/testthat/testParameter.R | 4 38 files changed, 846 insertions(+), 266 deletions(-)
Title: A Modular Platform for Reproducible Modeling of Species Niches
and Distributions
Description: The 'shiny' application 'wallace' is a modular platform for reproducible modeling of species niches and distributions. 'wallace' guides users through a complete analysis, from the acquisition of species occurrence and environmental data to visualizing model predictions on an interactive map, thus bundling complex workflows into a single, streamlined interface.
Author: Jamie M. Kass [aut, cre],
Bruno Vilela [aut],
Matthew E. Aiello-Lammens [aut],
Robert Muscarella [aut],
Cory Merow [aut],
Robert P. Anderson [aut]
Maintainer: Jamie M. Kass <jkass@gradcenter.cuny.edu>
Diff between wallace versions 1.0.3 dated 2018-01-31 and 1.0.4 dated 2018-02-12
wallace-1.0.3/wallace/inst/Rmd |only wallace-1.0.3/wallace/inst/css |only wallace-1.0.3/wallace/inst/js |only wallace-1.0.4/wallace/DESCRIPTION | 8 - wallace-1.0.4/wallace/MD5 | 92 +++++++------- wallace-1.0.4/wallace/NEWS.md | 7 + wallace-1.0.4/wallace/R/wallace-package.R | 6 wallace-1.0.4/wallace/README.md | 4 wallace-1.0.4/wallace/inst/shiny/Rmd |only wallace-1.0.4/wallace/inst/shiny/css |only wallace-1.0.4/wallace/inst/shiny/funcs/functions.R | 3 wallace-1.0.4/wallace/inst/shiny/js |only wallace-1.0.4/wallace/inst/shiny/modules/mod_c1_queryDB.R | 5 wallace-1.0.4/wallace/inst/shiny/server.R | 25 +-- wallace-1.0.4/wallace/inst/shiny/ui.R | 12 - wallace-1.0.4/wallace/man/run_wallace.Rd | 2 wallace-1.0.4/wallace/man/wallace-package.Rd | 9 - wallace-1.0.4/wallace/tests/testthat/run_wallace.R | 1 18 files changed, 91 insertions(+), 83 deletions(-)
Title: Large-Scale Social Network Analysis
Description: We present an implementation of the algorithms required to simulate large-scale social networks and retrieve their most relevant metrics.
Author: Nazrul Shaikh [aut, cre],
Xu Dong [aut],
Luis Castro [aut],
Christian Llano [ctb]
Maintainer: Nazrul Shaikh <networkgroupr@gmail.com>
Diff between fastnet versions 0.1.3 dated 2017-06-05 and 0.1.4 dated 2018-02-12
DESCRIPTION | 12 - MD5 | 192 ++++++++++---------- NAMESPACE | 116 ++++++------ NEWS.md | 41 ++-- R/dist.deg.R | 37 +-- R/draw.degdist.R | 38 ++-- R/draw.degdist.cum.R | 34 +-- R/draw.degdist.cum.log.R | 38 ++-- R/draw.degdist.log.R | 38 ++-- R/draw.net.R | 40 ++-- R/from.adjacency.R | 46 ++-- R/from.csc.R |only R/from.csr.R |only R/from.edgelist.R | 45 ++-- R/from.igraph.R | 44 ++-- R/from.statnet.R |only R/histo.dist.R | 34 +-- R/metric.cluster.global.R | 54 ++--- R/metric.cluster.mean.R | 64 +++--- R/metric.cluster.median.R | 62 +++--- R/metric.degree.effective.R | 36 +-- R/metric.degree.entropy.R | 56 ++--- R/metric.degree.max.R | 34 +-- R/metric.degree.max.efficient.R | 32 +-- R/metric.degree.mean.R | 34 +-- R/metric.degree.median.R | 40 ++-- R/metric.degree.sd.R | 34 +-- R/metric.distance.apl.R | 348 ++++++++++++++++++------------------ R/metric.distance.diameter.R | 350 ++++++++++++++++++------------------- R/metric.distance.effdia.R | 348 ++++++++++++++++++------------------ R/metric.distance.meanecc.R | 92 ++++----- R/metric.distance.medianecc.R | 96 +++++----- R/metric.distance.mpl.R | 350 ++++++++++++++++++------------------- R/metric.eigen.mean.R | 56 ++--- R/metric.eigen.median.R | 56 ++--- R/metric.eigen.value.R | 56 ++--- R/metric.graph.density.R | 38 ++-- R/neighbors.R | 38 ++-- R/net.barabasi.albert.R | 276 ++++++++++++++--------------- R/net.caveman.R | 164 ++++++++--------- R/net.complete.R | 112 +++++------ R/net.erdos.renyi.gnm.R | 268 ++++++++++++++-------------- R/net.erdos.renyi.gnp.R | 182 +++++++++---------- R/net.holme.kim.R | 160 ++++++++-------- R/net.random.plc.R | 306 ++++++++++++++++---------------- R/net.rewired.caveman.R | 236 ++++++++++++------------ R/net.ring.lattice.R | 100 +++++----- R/net.watts.strogatz.R | 200 ++++++++++----------- R/preview.deg.R | 36 +-- R/preview.net.R | 32 +-- R/to.edgelist.R |only R/to.igraph.R |only R/to.tidygraph.R |only man/dist.deg.Rd | 56 ++--- man/draw.degdist.Rd | 56 ++--- man/draw.degdist.cum.Rd | 56 ++--- man/draw.degdist.cum.log.Rd | 56 ++--- man/draw.degdist.log.Rd | 56 ++--- man/draw.net.Rd | 56 ++--- man/from.adjacency.Rd | 50 ++--- man/from.csc.Rd |only man/from.csr.Rd |only man/from.edgelist.Rd | 54 ++--- man/from.igraph.Rd | 55 ++--- man/from.statnet.Rd |only man/histo.dist.Rd | 56 ++--- man/metric.cluster.global.Rd | 62 +++--- man/metric.cluster.mean.Rd | 62 +++--- man/metric.cluster.median.Rd | 62 +++--- man/metric.degree.effective.Rd | 58 +++--- man/metric.degree.entropy.Rd | 62 +++--- man/metric.degree.max.Rd | 54 ++--- man/metric.degree.max.efficient.Rd | 54 ++--- man/metric.degree.mean.Rd | 58 +++--- man/metric.degree.median.Rd | 56 ++--- man/metric.degree.min.Rd | 54 ++--- man/metric.degree.sd.Rd | 54 ++--- man/metric.distance.apl.Rd | 114 ++++++------ man/metric.distance.diameter.Rd | 110 +++++------ man/metric.distance.effdia.Rd | 112 +++++------ man/metric.distance.meanecc.Rd | 66 +++--- man/metric.distance.medianecc.Rd | 68 +++---- man/metric.distance.mpl.Rd | 100 +++++----- man/metric.eigen.mean.Rd | 66 +++--- man/metric.eigen.median.Rd | 66 +++--- man/metric.eigen.value.Rd | 66 +++--- man/metric.graph.density.Rd | 56 ++--- man/neighbors.Rd | 60 +++--- man/net.barabasi.albert.Rd | 72 +++---- man/net.caveman.Rd | 72 +++---- man/net.complete.Rd | 62 +++--- man/net.erdos.renyi.gnm.Rd | 74 +++---- man/net.erdos.renyi.gnp.Rd | 74 +++---- man/net.holme.kim.Rd | 68 +++---- man/net.random.plc.Rd | 68 +++---- man/net.rewired.caveman.Rd | 68 +++---- man/net.ring.lattice.Rd | 64 +++--- man/net.watts.strogatz.Rd | 68 +++---- man/preview.deg.Rd | 56 ++--- man/preview.net.Rd | 56 ++--- man/to.edgelist.Rd |only man/to.igraph.Rd |only man/to.tidygraph.Rd |only 103 files changed, 3997 insertions(+), 3977 deletions(-)
Title: Methods for Estimating Optimal Dynamic Treatment Regimes
Description: Methods to estimate dynamic treatment regimes using Interactive Q-Learning, Q-Learning, weighted learning, and value-search methods based on Augmented Inverse Probability Weighted Estimators and Inverse Probability Weighted Estimators.
Author: S. T. Holloway, E. B. Laber, K. A. Linn, B. Zhang, M. Davidian, and A. A. Tsiatis
Maintainer: Shannon T. Holloway <sthollow@ncsu.edu>
Diff between DynTxRegime versions 3.01 dated 2017-05-21 and 3.2 dated 2018-02-12
DESCRIPTION | 8 ++++---- MD5 | 18 +++++++++--------- R/AG00_OptimBasic.R | 19 +++++++++++++++++-- R/AG02_OWLOptim.R | 7 ++++++- R/AH04_newOptimalClass.R | 3 ++- R/AJ05_newEARL.R | 4 ++++ R/AK01_RWLOptim.R | 5 ++++- R/AK02_RWL.R | 2 ++ R/RWL.R | 4 ++++ R/kernelFunc.R | 3 +++ 10 files changed, 55 insertions(+), 18 deletions(-)
Title: Boost Mutex Functionality in R
Description: Boost mutex functionality in R.
Author: Michael J. Kane <kaneplusplus@gmail.com>
Maintainer: Michael J. Kane <bigmemoryauthors@gmail.com>
Diff between synchronicity versions 1.1.9.1 dated 2016-02-17 and 1.3.2 dated 2018-02-12
synchronicity-1.1.9.1/synchronicity/inst/synchronicity/SharedCounter.h |only synchronicity-1.1.9.1/synchronicity/man/lock.Rd |only synchronicity-1.1.9.1/synchronicity/man/read-methods.Rd |only synchronicity-1.1.9.1/synchronicity/src/SharedCounter.cpp |only synchronicity-1.3.2/synchronicity/DESCRIPTION | 14 synchronicity-1.3.2/synchronicity/MD5 | 34 - synchronicity-1.3.2/synchronicity/NAMESPACE | 7 synchronicity-1.3.2/synchronicity/NEWS |only synchronicity-1.3.2/synchronicity/R/RcppExports.R | 26 - synchronicity-1.3.2/synchronicity/R/mutexes.R | 104 +++- synchronicity-1.3.2/synchronicity/README.md | 3 synchronicity-1.3.2/synchronicity/man/attach.mutex-methods.Rd | 3 synchronicity-1.3.2/synchronicity/man/boost.mutex-class.Rd | 1 synchronicity-1.3.2/synchronicity/man/boost.mutex.Rd | 5 synchronicity-1.3.2/synchronicity/man/describe-methods.Rd |only synchronicity-1.3.2/synchronicity/man/describe.Rd | 3 synchronicity-1.3.2/synchronicity/man/description-methods.Rd | 1 synchronicity-1.3.2/synchronicity/man/lock-and-unlock-methods.Rd |only synchronicity-1.3.2/synchronicity/man/shared-methods.Rd |only synchronicity-1.3.2/synchronicity/man/synchronicity-package.Rd | 4 synchronicity-1.3.2/synchronicity/src/RcppExports.cpp | 148 +++--- synchronicity-1.3.2/synchronicity/src/synchronicity.cpp | 238 +++------- 22 files changed, 304 insertions(+), 287 deletions(-)
Title: Stepped Wedge Cluster Randomized Trial (SW CRT) Design
Description: A set of tools for examining the design and analysis aspects of stepped wedge cluster randomized trials (SW CRT) based on a repeated cross-sectional sampling scheme (Hussey MA and Hughes JP (2007) Contemporary Clinical Trials 28:182-191. <doi:10.1016/j.cct.2006.05.007>).
Author: Jim Hughes and Navneet R. Hakhu
Maintainer: Jim Hughes <jphughes@uw.edu>
Diff between swCRTdesign versions 2.1 dated 2016-12-22 and 2.2 dated 2018-02-12
DESCRIPTION | 8 +-- MD5 | 6 +- R/swSummary.R | 6 +- man/swCRTdesign-package.Rd | 94 ++++++++++++++++++++++----------------------- 4 files changed, 57 insertions(+), 57 deletions(-)
Title: Internet Memes for Data Analysts
Description: Generates internet memes that optionally include a superimposed inset plot and other atypical features,
combining the visual impact of an attention-grabbing meme with graphic results of data analysis.
The package differs from related packages that focus on imitating and reproducing standard memes.
Some packages do this by interfacing with online meme generators whereas others achieve this natively.
This package takes the latter approach. It does not interface with online meme generators or require any authentication with external websites.
It reads images directly from local files or via URL and meme generation is done by the package.
While this is similar to the 'meme' package available on CRAN, it differs in that the focus is on
allowing for non-standard meme layouts and hybrids of memes mixed with graphs.
While this package can be used to make basic memes like an online meme generator would produce,
it caters primarily to hybrid graph-meme plots where the meme presentation can be seen as a backdrop highlighting
foreground graphs of data analysis results.
The package also provides support for an arbitrary number of meme text labels with arbitrary size, position and other attributes
rather than restricting to the standard top and/or bottom text placement.
This is useful for proper aesthetic interleaving of plots of data between meme image backgrounds and overlain text labels.
The package offers a selection of templates for graph placement and appearance with respect to the underlying meme.
Graph templates also permit additional template-specific customization.
Animated gif support is provided but this is optional and functional only if the 'magick' package is installed.
'magick' is not required unless gif functionality is desired.
Author: Matthew Leonawicz [aut, cre]
Maintainer: Matthew Leonawicz <mfleonawicz@alaska.edu>
Diff between memery versions 0.4.0 dated 2018-02-01 and 0.4.1 dated 2018-02-12
DESCRIPTION | 8 ++++---- MD5 | 16 ++++++++-------- NEWS.md | 5 +++++ inst/doc/memery.R | 1 + inst/doc/memery.Rmd | 1 + inst/doc/memery.html | 5 +++-- inst/shiny/memeApp/app.R | 10 ++++++---- tests/testthat/test-meme.R | 6 +++--- vignettes/memery.Rmd | 1 + 9 files changed, 32 insertions(+), 21 deletions(-)
Title: Boosted Multivariate Trees for Longitudinal Data
Description: Implements Friedman's gradient descent boosting algorithm for longitudinal data using multivariate tree base learners. A time-covariate interaction effect is modeled using penalized B-splines (P-splines) with estimated adaptive smoothing parameter.
Author: Hemant Ishwaran <hemant.ishwaran@gmail.com>, Amol Pande <amoljpande@gmail.com>
Maintainer: Udaya B. Kogalur <ubk@kogalur.com>
Diff between boostmtree versions 1.2.0 dated 2017-09-05 and 1.2.1 dated 2018-02-12
DESCRIPTION | 8 ++++---- MD5 | 26 +++++++++++++------------- R/boostmtree.R | 16 +++++++++++----- R/boostmtree.news.R | 2 +- R/generic.predict.boostmtree.R | 20 +++++++++++++------- R/partialPlot.R | 2 +- R/plot.boostmtree.R | 2 +- R/predict.boostmtree.R | 2 +- R/print.boostmtree.R | 2 +- R/simLong.R | 2 +- R/utilities.R | 2 +- R/zzz.R | 2 +- data/spirometry.RData |binary inst/NEWS | 10 +++++++--- 14 files changed, 56 insertions(+), 40 deletions(-)
Title: Generate 'CodeMeta' Metadata for R Packages
Description: The 'Codemeta' Project defines a 'JSON-LD' format for describing
software metadata, as detailed at <https://codemeta.github.io>. This package
provides utilities to generate, parse, and modify 'codemeta.json' files
automatically for R packages, as well as tools and examples for working with
'codemeta.json' 'JSON-LD' more generally.
Author: Carl Boettiger [aut, cre, cph]
(<https://orcid.org/0000-0002-1642-628X>)
Maintainer: Carl Boettiger <cboettig@gmail.com>
Diff between codemetar versions 0.1.3 dated 2018-02-08 and 0.1.4 dated 2018-02-12
codemetar-0.1.3/codemetar/inst/notebook |only codemetar-0.1.4/codemetar/DESCRIPTION | 6 codemetar-0.1.4/codemetar/MD5 | 61 +++------- codemetar-0.1.4/codemetar/NEWS.md | 8 + codemetar-0.1.4/codemetar/R/codemeta_validate.R | 2 codemetar-0.1.4/codemetar/R/codemetar.R | 4 codemetar-0.1.4/codemetar/README.md | 4 codemetar-0.1.4/codemetar/inst/doc/A-codemeta-intro.R | 2 codemetar-0.1.4/codemetar/inst/doc/A-codemeta-intro.Rmd | 2 codemetar-0.1.4/codemetar/inst/doc/A-codemeta-intro.html | 4 codemetar-0.1.4/codemetar/inst/doc/B-translating.R | 2 codemetar-0.1.4/codemetar/inst/doc/B-translating.Rmd | 2 codemetar-0.1.4/codemetar/inst/doc/B-translating.html | 4 codemetar-0.1.4/codemetar/inst/doc/C-validation-in-json-ld.R | 2 codemetar-0.1.4/codemetar/inst/doc/C-validation-in-json-ld.Rmd | 2 codemetar-0.1.4/codemetar/inst/doc/C-validation-in-json-ld.html | 4 codemetar-0.1.4/codemetar/inst/doc/D-codemeta-parsing.R | 2 codemetar-0.1.4/codemetar/inst/doc/D-codemeta-parsing.Rmd | 2 codemetar-0.1.4/codemetar/inst/doc/D-codemeta-parsing.html | 8 - codemetar-0.1.4/codemetar/man/codemeta_validate.Rd | 2 codemetar-0.1.4/codemetar/man/codemetar-package.Rd | 4 codemetar-0.1.4/codemetar/tests/testthat/test-crosswalk.R | 2 codemetar-0.1.4/codemetar/vignettes/A-codemeta-intro.Rmd | 2 codemetar-0.1.4/codemetar/vignettes/B-translating.Rmd | 2 codemetar-0.1.4/codemetar/vignettes/C-validation-in-json-ld.Rmd | 2 codemetar-0.1.4/codemetar/vignettes/D-codemeta-parsing.Rmd | 2 26 files changed, 77 insertions(+), 60 deletions(-)
Title: Pattern Oriented Modelling Information Criterion
Description: Calculations of an information criterion are proposed to check the quality of simulations results of Agent-based models (ABM/IBM) or other non-linear rule-based models. The POMDEV measure (Pattern Oriented Modelling DEViance) is based on the Kullback-Leibler divergence and likelihood theory. It basically indicates the deviance of simulation results from field observations. Once POMDEV scores and metropolis-hasting sampling on different model versions are effectuated, POMIC scores (Pattern Oriented Modelling Information Criterion) can be calculated. This method could be further developed to incorporate multiple patterns assessment. Piou C, U Berger and V Grimm (2009) <doi:10.1016/j.ecolmodel.2009.05.003>.
Author: Cyril Piou [aut, cre]
Maintainer: Cyril Piou <cyril.piou@cirad.fr>
Diff between Pomic versions 1.0.3 dated 2016-05-20 and 1.0.4 dated 2018-02-12
DESCRIPTION | 14 +++++++------- MD5 | 14 +++++++------- NEWS | 4 ++++ man/Pomic-package.Rd | 8 ++++---- man/pomdev.corrected.rd | 2 +- man/pomdev.extra.Rd | 2 +- man/pomdev.rd | 2 +- man/pomdev.ts.rd | 2 +- 8 files changed, 26 insertions(+), 22 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-02-17 0.3.0
2015-07-08 0.2.0
2014-12-11 0.1.1
2014-10-16 0.1.0
Title: Easy Handling of and Access to Files Organized in Structured
Directories
Description: A file set refers to a set of files located in one or more directories on the file system. This package provides classes and methods to locate, setup, subset, navigate and iterate such sets. The API is designed such that these classes can be extended via inheritance to provide a richer API for special file formats. Moreover, a specific name format is defined such that filenames and directories can be considered to have full names which consists of a name followed by comma-separated tags. This adds additional flexibility to identify file sets and individual files. NOTE: This package's API should be considered to be in an beta stage. Its main purpose is currently to support the aroma.* packages, where it is one of the main core components; if you decide to build on top of this package, please contact the author first.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Diff between R.filesets versions 2.11.0 dated 2017-02-27 and 2.12.0 dated 2018-02-12
R.filesets-2.11.0/R.filesets/tests/GenericDataFileSet,dsApply.R |only R.filesets-2.12.0/R.filesets/DESCRIPTION | 17 R.filesets-2.12.0/R.filesets/MD5 | 72 +- R.filesets-2.12.0/R.filesets/NAMESPACE | 2 R.filesets-2.12.0/R.filesets/NEWS | 21 R.filesets-2.12.0/R.filesets/R/006.fixVarArgs.R | 23 R.filesets-2.12.0/R.filesets/R/999.DEPRECATED.R | 14 R.filesets-2.12.0/R.filesets/R/999.NonDocumentedObjects.R | 6 R.filesets-2.12.0/R.filesets/R/999.package.R | 1 R.filesets-2.12.0/R.filesets/R/Arguments.EXTRAS.R | 12 R.filesets-2.12.0/R.filesets/R/ChecksumFile.R | 11 R.filesets-2.12.0/R.filesets/R/ChecksumFileSet.R | 10 R.filesets-2.12.0/R.filesets/R/ColumnNamesInterface.R | 15 R.filesets-2.12.0/R.filesets/R/FullNameInterface.R | 35 R.filesets-2.12.0/R.filesets/R/FullNameInterface.appendFullNameTranslatorByNnn.R | 18 R.filesets-2.12.0/R.filesets/R/GenericDataFile.ATTRS.R | 38 - R.filesets-2.12.0/R.filesets/R/GenericDataFile.R | 154 ---- R.filesets-2.12.0/R.filesets/R/GenericDataFileList.R | 8 R.filesets-2.12.0/R.filesets/R/GenericDataFileSet.PARALLEL.R | 356 ---------- R.filesets-2.12.0/R.filesets/R/GenericDataFileSet.R | 308 -------- R.filesets-2.12.0/R.filesets/R/GenericDataFileSet.getChecksum.R | 2 R.filesets-2.12.0/R.filesets/R/GenericDataFileSetList.R | 39 - R.filesets-2.12.0/R.filesets/R/GenericTabularFile.R | 60 - R.filesets-2.12.0/R.filesets/R/GenericTabularFile.writeColumnsToFiles.R | 21 R.filesets-2.12.0/R.filesets/R/GenericTabularFileSet.R | 7 R.filesets-2.12.0/R.filesets/R/RDataFile.R | 7 R.filesets-2.12.0/R.filesets/R/RDataFileSet.R | 7 R.filesets-2.12.0/R.filesets/R/RdsFile.R | 10 R.filesets-2.12.0/R.filesets/R/RdsFileSet.R | 8 R.filesets-2.12.0/R.filesets/R/TabularTextFile.R | 158 ---- R.filesets-2.12.0/R.filesets/R/TabularTextFileSet.R | 11 R.filesets-2.12.0/R.filesets/R/dropRootPathTags.R | 6 R.filesets-2.12.0/R.filesets/R/fullname.R | 16 R.filesets-2.12.0/R.filesets/R/readDataFrame.R | 10 R.filesets-2.12.0/R.filesets/R/readTableHeader.R | 8 R.filesets-2.12.0/R.filesets/R/zzz.R | 7 R.filesets-2.12.0/R.filesets/man/dsApply.GenericDataFileSet.Rd | 15 R.filesets-2.12.0/R.filesets/tests/DEPRECATED.GenericDataFileSet,dsApply.R |only 38 files changed, 84 insertions(+), 1429 deletions(-)
Title: A Port of 'NetLogo' Functions and Language to R
Description: Easily create agent-based models in R following the 'NetLogo'
framework (Wilensky, 1999; <http://ccl.northwestern.edu/netlogo/>).
'NetLogoR' provides classes to represent 'patches' (raster cells) and
'turtles' (individuals), the necessary 'NetLogo' primitives
(<https://ccl.northwestern.edu/netlogo/docs/dictionary.html>), and
complementary functions to easily build agent-based models or translate
'NetLogo' models in R. A programming guide derived from the 'NetLogo'
Programming Guide
(<https://ccl.northwestern.edu/netlogo/docs/programming.html>) and a
dictionary of 'NetLogo' primitives
(<https://ccl.northwestern.edu/netlogo/docs/dictionary.html>) equivalences
are available. As examples, three 'NetLogo' models (Ants,
<http://ccl.northwestern.edu/netlogo/models/Ants>; Butterfly, Railsback and
Grimm, 2012; Wolf-Sheep-Predation,
<http://ccl.northwestern.edu/netlogo/models/WolfSheepPredation>) were
translated in R language using 'NetLogoR'. NOTE: To increment 'time', these
functions can use a for loop or can be integrated with a discrete event
simulator, such as 'SpaDES' (<https://cran.r-project.org/package=SpaDES>).
The suggested package 'fastshp' can be installed with
'install.packages("fastshp", repos = "https://rforge.net", type = "source")'.
Author: Sarah Bauduin [aut, cre],
Eliot J B McIntire [aut],
Alex M Chubaty [aut],
Her Majesty the Queen in Right of Canada, as represented by the
Minister of Natural Resources Canada [cph]
Maintainer: Sarah Bauduin <sarahbauduin@hotmail.fr>
Diff between NetLogoR versions 0.3.1 dated 2018-02-05 and 0.3.2 dated 2018-02-12
DESCRIPTION | 10 ++++----- MD5 | 14 ++++++------ NEWS.md | 27 ++++++++++++++++-------- R/turtle-functions.R | 36 +++++++++++++++++++-------------- README.md | 2 + build/vignette.rds |binary tests/testthat/test-agentMatrix.R | 6 ++--- tests/testthat/test-turtle-functions.R | 17 ++++++++++++++- 8 files changed, 72 insertions(+), 40 deletions(-)
Title: Basic Biological Sequence Handling
Description: Basic functions for microbial sequence data analysis. The idea is to use the basic R data structures as much as possible, without building complex data types.
Author: Lars Snipen, Kristian Hovde Liland
Maintainer: Lars Snipen <lars.snipen@nmbu.no>
Diff between microseq versions 1.2.1 dated 2018-02-07 and 1.2.2 dated 2018-02-12
DESCRIPTION | 14 +++++++------- MD5 | 2 +- 2 files changed, 8 insertions(+), 8 deletions(-)
Title: Combine and Export Data Frames
Description: Functions to combine data.frames in ways that require additional effort in
base R, and to add metadata (id, title, ...) that can be used for printing and
xlsx export. The 'Tatoo_report' class is provided as a
convenient helper to write several such tables to a workbook, one table per
worksheet. Tatoo is built on top of 'openxlsx', but intimate knowledge of
that package is not required to use tatoo.
Author: Stefan Fleck [aut, cre]
Maintainer: Stefan Fleck <stefan.b.fleck@gmail.com>
Diff between tatoo versions 1.0.10 dated 2018-01-24 and 1.1.0 dated 2018-02-12
DESCRIPTION | 9 MD5 | 149 - NAMESPACE | 197 - NEWS.md | 8 R/Mashed_table.R | 2 R/Tagged_table.R | 887 +++---- R/as_latex.R | 801 +++--- R/as_lines.R | 796 +++--- R/as_workbook.R | 1186 +++++----- R/regions.R |only R/tatoo-package.R | 9 R/utils-hammr.R | 18 R/utils.R | 258 +- R/walk_regions.R |only README.md | 85 build/vignette.rds |binary inst/doc/named_regions.R |only inst/doc/named_regions.Rmd |only inst/doc/named_regions.html |only inst/doc/tatoo.R | 308 +- inst/doc/tatoo.Rmd | 6 inst/doc/tatoo.html | 958 ++++---- man/Composite_table.Rd | 148 - man/Mashed_table.Rd | 246 +- man/Stacked_table.Rd | 134 - man/Tagged_table.Rd | 142 - man/Tatoo_report.Rd | 60 man/as.data.table.Composite_table.Rd | 84 man/as.data.table.Mashed_table.Rd | 102 man/as_Composite_table.Rd | 142 - man/as_Mashed_table.Rd | 54 man/as_latex.Composite_table.Rd | 76 man/as_latex.Mashed_table.Rd | 102 man/as_latex.Rd | 181 - man/as_latex.Tagged_table.Rd | 68 man/as_latex.Tatoo_report.Rd | 60 man/as_latex.data.frame.Rd | 68 man/as_lines.Rd | 112 man/as_multinames.Rd | 72 man/as_workbook.Rd | 160 - man/assign_tt_meta.Rd | 34 man/cmash.Rd | 162 - man/default_kable_options.Rd | 48 man/df_typecast_all.Rd | 44 man/flip_names.Rd | 72 man/is_Stacked_table.Rd | 36 man/is_Tagged_table.Rd | 28 man/is_Tatoo_report.Rd | 36 man/is_Tatoo_table.Rd | 36 man/is_any_class.Rd | 38 man/is_class.Rd | 64 man/is_col_classes.Rd | 42 man/mashed_set.Rd | 58 man/multinames.Rd | 84 man/multinames_to_colspans.Rd | 34 man/open_file.Rd | 36 man/print.Composite_table.Rd | 44 man/print.Mashed_table.Rd | 64 man/print.Stacked_table.Rd | 38 man/print.TT_meta.Rd | 38 man/print.Tagged_table.Rd | 38 man/print.Tatoo_report.Rd | 38 man/regions.Rd |only man/sanitize_excel_sheet_names.Rd | 72 man/spacing-set.Rd | 38 man/str_nobreak.Rd | 34 man/tagged_set.Rd | 79 man/tatoo.Rd | 84 man/tatoo_table.Rd | 74 man/tt_meta.Rd | 70 man/vec_prioritise.Rd | 44 man/walk_regions.Rd |only man/write_worksheet.Rd | 159 - tests/testthat/manual_tests/test_benchmark_creating_worksheets.R |only tests/testthat/manual_tests/test_named_region_names.R |only tests/testthat/test_as_workbook.R | 137 - tests/testthat/test_utils-regions.R |only tests/testthat/test_walk_regions.R |only vignettes/named_regions.Rmd |only vignettes/plain_table.png |only vignettes/plain_table_2.png |only vignettes/plain_table_3.png |only vignettes/tatoo.Rmd | 6 83 files changed, 4928 insertions(+), 4669 deletions(-)
Title: Cryptocurrency Market Data
Description: Retrieves crypto currency current and historical information as well as information on the exchanges they are listed on. For current and historical it will retrieve the daily open, high, low and close values for all crypto currencies. This retrieves the historical market data by web scraping tables provided by 'Cryptocurrency Market Capitalizations' <https://coinmarketcap.com>.
Author: Jesse Vent [aut, cre]
Maintainer: Jesse Vent <jesse@solutiondesign.io>
Diff between crypto versions 0.1.2 dated 2018-02-11 and 0.1.3 dated 2018-02-12
DESCRIPTION | 6 +++--- MD5 | 22 +++++++++++----------- R/getCoins.R | 6 +++--- R/getExchanges.R | 6 +++--- R/getPrices.R | 3 ++- R/listCoins.R | 4 ++-- R/scraper.R | 2 +- man/getCoins.Rd | 4 ++-- man/getExchanges.Rd | 4 ++-- man/getPrices.Rd | 2 +- man/listCoins.Rd | 4 ++-- man/scraper.Rd | 2 +- 12 files changed, 33 insertions(+), 32 deletions(-)
Title: An Interactive Application for ODE Parameter Inference Using
Gradient Matching
Description: An interactive Shiny application to perform fast parameter inference on
dynamical systems (described by ordinary differential equations) using gradient matching.
Please see the project page for more details.
Author: Joe Wandy
Maintainer: Joe Wandy <joe.wandy@glasgow.ac.uk>
Diff between shinyKGode versions 1.0.4 dated 2018-02-09 and 1.0.5 dated 2018-02-12
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- README.md | 2 +- inst/application/server.R | 15 ++++++++------- inst/application/ui.R | 2 +- 5 files changed, 17 insertions(+), 16 deletions(-)
Title: Fixed Effects Nonlinear Maximum Likelihood Models
Description: Efficient estimation of multiple fixed-effects maximum likelihood models
with, possibly, non-linear in parameters right hand sides. Standard-errors
can easily be clustered. It also includes tools to seamlessly export (to Latex)
the results of various estimations.
Author: Laurent Berge
Maintainer: Laurent Berge <laurent.berge@uni.lu>
Diff between FENmlm versions 2.0.1 dated 2018-01-30 and 2.1.0 dated 2018-02-12
DESCRIPTION | 10 MD5 | 25 NAMESPACE | 2 R/ML_Families.R | 89 ++- R/MiscFuns.R | 117 ++++ R/RcppExports.R | 56 ++ R/femlm.R | 888 ++++++++++++++++++++++------------ inst/NEWS.Rd | 22 man/FENmlm-package.Rd | 4 man/femlm.Rd | 25 src/Makevars |only src/Makevars.win |only src/RcppExports.cpp | 193 +++++++ src/Rcpp_Parallel_femlm_Functions.cpp |only src/Rcpp_get_derivative.cpp | 74 ++ 15 files changed, 1139 insertions(+), 366 deletions(-)
More information about Bivariate.Pareto at CRAN
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2014-03-05 0.39
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2011-12-02 0.29
2011-09-08 0.26
2011-05-09 0.25
2011-03-22 0.21
2011-02-28 0.20
2010-09-08 0.16
2010-03-16 0.1