Title: Client for the HuffPost Pollster API
Description: Client for the HuffPost Pollster API, which provides
access to U.S. polls on elections and political opinion.
Author: Jeffrey B. Arnold [aut, cre],
Thomas J. Leeper [aut],
Drew Linzer [aut]
Maintainer: Jeffrey B. Arnold <jeffrey.arnold@gmail.com>
Diff between pollstR versions 2.0.0 dated 2017-02-20 and 2.0.1 dated 2018-04-02
DESCRIPTION | 8 MD5 | 14 NEWS.md | 4 build/vignette.rds |binary inst/doc/examples.R | 7 inst/doc/examples.Rmd | 7 inst/doc/examples.html | 759 ++++++++++++++++++++++++++++++++++++++----------- vignettes/examples.Rmd | 7 8 files changed, 624 insertions(+), 182 deletions(-)
Title: Minimization Tool for Pharmacokinetic-Pharmacodynamic Data
Analysis
Description: This is a set of minimization tools (maximum likelihood estimation and least square fitting) to solve examples in the Johan Gabrielsson and Dan Weiner's book "Pharmacokinetic and Pharmacodynamic Data Analysis - Concepts and Applications" 5th ed. (ISBN:9198299107). Examples include linear and nonlinear compartmental model, turn-over model, single or multiple dosing bolus/infusion/oral models, allometry, toxicokinetics, reversible metabolism, in-vitro/in-vivo extrapolation, enterohepatic circulation, metabolite modeling, Emax model, inhibitory model, tolerance model, oscillating response model, enantiomer interaction model, effect compartment model, drug-drug interaction model, receptor occupancy model, and rebound phenomena model.
Author: Kyun-Seop Bae [aut]
Maintainer: Kyun-Seop Bae <k@acr.kr>
Diff between wnl versions 0.3.3 dated 2018-03-02 and 0.4.0 dated 2018-04-02
DESCRIPTION | 8 ++++---- MD5 | 22 ++++++++++++---------- NAMESPACE | 2 ++ R/cmpChi.R | 6 +++++- R/dx.R |only R/nlr.R | 21 ++++++++++++++------- R/wnl5.R | 12 +++++++++--- inst/NEWS.Rd | 11 ++++++++++- inst/doc/wnl-manual.pdf |binary man/dx.Rd |only man/nlr.Rd | 21 ++++++++++++++++++--- man/wnl-package.Rd | 3 +-- man/wnl5.Rd | 17 +++++++++++++++-- 13 files changed, 90 insertions(+), 33 deletions(-)
Title: Classes for Relational Data
Description: Tools to create and modify network objects. The network class can represent a range of relational data types, and supports arbitrary vertex/edge/graph attributes.
Author: Carter T. Butts [aut, cre],
David Hunter [ctb],
Mark Handcock [ctb],
Skye Bender-deMoll [ctb],
Jeffrey Horner [ctb]
Maintainer: Carter T. Butts <buttsc@uci.edu>
Diff between network versions 1.13.0 dated 2015-09-19 and 1.13.0.1 dated 2018-04-02
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- NAMESPACE | 3 +++ data/emon.RData |binary data/flo.RData |binary 5 files changed, 10 insertions(+), 7 deletions(-)
Title: Estimating the Number of Essential Genes in a Genome
Description: Estimating the number of essential genes in a genome on the basis of data from a random transposon mutagenesis experiment, through the use of a Gibbs sampler.
Author: Karl W Broman <kbroman@biostat.wisc.edu>
Maintainer: Karl W Broman <kbroman@biostat.wisc.edu>
Diff between negenes versions 1.0-5 dated 2016-05-22 and 1.0-8 dated 2018-04-02
negenes-1.0-5/negenes/inst/README.md |only negenes-1.0-8/negenes/DESCRIPTION | 8 ++++---- negenes-1.0-8/negenes/MD5 | 23 ++++++++++++----------- negenes-1.0-8/negenes/NAMESPACE | 2 +- negenes-1.0-8/negenes/R/negenes.R | 2 +- negenes-1.0-8/negenes/README.md | 6 +++--- negenes-1.0-8/negenes/data/Mtb80.RData |binary negenes-1.0-8/negenes/inst/INSTALL_ME.txt | 18 +++++++++--------- negenes-1.0-8/negenes/inst/STATUS.txt | 9 ++++++++- negenes-1.0-8/negenes/man/negenes.Rd | 9 ++++++--- negenes-1.0-8/negenes/src/R_init.c |only negenes-1.0-8/negenes/src/R_init.h |only negenes-1.0-8/negenes/src/negenes.c | 2 +- negenes-1.0-8/negenes/src/negenes.h | 2 +- 14 files changed, 46 insertions(+), 35 deletions(-)
Title: Determines Species Probabilities Based on Functional Traits
Description: The objective of these functions is to derive a species assemblage
that satisfies a functional trait profile. Restoring resilient ecosystems
requires a flexible framework for selecting assemblages that are based on the
functional traits of species. However, current trait-based models have been
limited to algorithms that can only select species by optimising specific trait
values, and could not elegantly accommodate the common desire among restoration
ecologists to produce functionally diverse assemblages. We have solved this
problem by applying a non-linear optimisation algorithm that optimises Rao Q,
a closed-form functional trait diversity index that incorporates species
abundances, subject to other linear constraints. This framework generalises
previous models that only optimised the entropy of the community, and can
optimise both functional diversity and entropy simultaneously. This package
can also be used to generate experimental assemblages to test the effects
of community-level traits on community dynamics and ecosystem function. The
method is based on theory discussed in Laughlin (2014, Ecology Letters)
<doi.org/10.1111/ele.12288>.
Author: Daniel Laughlin [cre],
Loic Chalmandrier [aut]
Maintainer: Daniel Laughlin <danielclaughlin@gmail.com>
Diff between Select versions 1.2 dated 2017-12-16 and 1.3 dated 2018-04-02
DESCRIPTION | 51 +++++--- MD5 | 29 ++++- R/Select-package.r |only R/pineforest-data.R |only R/plotProbs.R | 74 +++++++----- R/selectSpecies.R | 275 +++++++++++++++++++++++++++++------------------- R/serpentine-data.R |only R/tropicalforest-data.R |only build |only data |only inst |only man/Select.Rd |only man/pineforest.Rd |only man/plotProbs.Rd | 51 ++++++-- man/selectSpecies.Rd | 57 +++++---- man/serpentine.Rd |only man/tropicalforest.Rd |only tests |only vignettes |only 19 files changed, 337 insertions(+), 200 deletions(-)
Title: Brazilian Economic Time Series
Description: It provides access to and information about the most important
Brazilian economic time series - from the Getulio Vargas Foundation <http://portal.fgv.br/en>,
the Central Bank of Brazil <http://www.bcb.gov.br> and the Brazilian Institute of Geography
and Statistics <http://www.ibge.gov.br>. It also presents tools for managing, analysing (e.g.
generating dynamic reports with a complete analysis of a series) and exporting
these time series.
Author: Pedro Costa Ferreira [aut],
Jonatha Costa [aut, cre],
Talitha Speranza [aut],
Fernando Teixeira [ctb],
Daiane Marcolino [ctb]
Maintainer: Jonatha Costa <jonatha.costa@fgv.br>
Diff between BETS versions 0.3.3 dated 2017-10-12 and 0.3.6 dated 2018-04-02
BETS-0.3.3/BETS/LICENSE |only BETS-0.3.3/BETS/build |only BETS-0.3.3/BETS/inst/doc |only BETS-0.3.3/BETS/vignettes |only BETS-0.3.6/BETS/DESCRIPTION | 33 +++++++++++++++---------------- BETS-0.3.6/BETS/MD5 | 33 +++++++++---------------------- BETS-0.3.6/BETS/R/BETS.search.R | 2 - BETS-0.3.6/BETS/R/BETS.sidra.search.R | 4 +-- BETS-0.3.6/BETS/R/connection.R | 12 ++++++----- BETS-0.3.6/BETS/R/get.period.R | 2 - BETS-0.3.6/BETS/R/get.series.R | 14 ++++++++++--- BETS-0.3.6/BETS/R/get.series.bacen.R | 2 - BETS-0.3.6/BETS/inst/analysis_SARIMA.Rmd | 2 - BETS-0.3.6/BETS/man/BETS.search.Rd | 2 - BETS-0.3.6/BETS/man/BETS.sidra.search.Rd | 4 +-- 15 files changed, 53 insertions(+), 57 deletions(-)
Title: R Commander
Description: A platform-independent basic-statistics GUI (graphical user interface) for R, based on the tcltk package.
Author: John Fox [aut, cre],
Milan Bouchet-Valat [aut],
Liviu Andronic [ctb],
Michael Ash [ctb],
Theophilius Boye [ctb],
Stefano Calza [ctb],
Andy Chang [ctb],
Philippe Grosjean [ctb],
Richard Heiberger [ctb],
Kosar Karimi Pour [ctb],
G. Jay Kerns [ctb],
Renaud Lancelot [ctb],
Matthieu Lesnoff [ctb],
Uwe Ligges [ctb],
Samir Messad [ctb],
Martin Maechler [ctb],
Robert Muenchen [ctb],
Duncan Murdoch [ctb],
Erich Neuwirth [ctb],
Dan Putler [ctb],
Brian Ripley [ctb],
Miroslav Ristic [ctb],
Peter Wolf [ctb],
Kevin Wright [ctb]
Maintainer: John Fox <jfox@mcmaster.ca>
Diff between Rcmdr versions 2.4-2 dated 2018-02-23 and 2.4-3 dated 2018-04-02
DESCRIPTION | 14 MD5 | 16 NEWS | 4 R/graphs-menu.R | 1581 +++++++++++++--------------- R/model-menu.R | 329 ++--- build/vignette.rds |binary inst/doc/Getting-Started-with-the-Rcmdr.pdf |binary man/Rcmdr-package.Rd | 8 man/Rcmdr.Utilities.Rd | 10 9 files changed, 983 insertions(+), 979 deletions(-)
Title: Photobiological Calculations
Description: Definitions of classes, methods, operators and functions for use in
photobiology and radiation meteorology and climatology. Calculation of
effective (weighted) and not-weighted irradiances/doses, fluence rates,
transmittance, reflectance, absorptance, absorbance and diverse
ratios and other derived quantities from spectral data. Local maxima and
minima. Conversion between energy- and photon-based units. Wavelength
interpolation. Astronomical calculations related solar angles and day
length. Colours and vision. This package is part of the
'r4photobiology' suite, Aphalo P. J. (2015) <doi:10.19232/uv4pb.2015.1.14>.
Author: Pedro J. Aphalo [aut, cre] (<https://orcid.org/0000-0003-3385-972X>),
Titta K. Kotilainen [ctb] (<https://orcid.org/0000-0002-2822-9734>),
Glenn Davis [ctb]
Maintainer: Pedro J. Aphalo <pedro.aphalo@helsinki.fi>
Diff between photobiology versions 0.9.19 dated 2018-03-05 and 0.9.20 dated 2018-04-02
photobiology-0.9.19/photobiology/man/spread.Rd |only photobiology-0.9.20/photobiology/DESCRIPTION | 22 photobiology-0.9.20/photobiology/MD5 | 143 - photobiology-0.9.20/photobiology/NAMESPACE | 84 photobiology-0.9.20/photobiology/NEWS | 121 - photobiology-0.9.20/photobiology/R/defunct.R | 4 photobiology-0.9.20/photobiology/R/e2quantum.multipliers.r | 10 photobiology-0.9.20/photobiology/R/head-tail.R | 2 photobiology-0.9.20/photobiology/R/integrate.xy.r | 2 photobiology-0.9.20/photobiology/R/mspct.methods.R | 2 photobiology-0.9.20/photobiology/R/photobiology.r | 4 photobiology-0.9.20/photobiology/R/rbindspct.r | 8 photobiology-0.9.20/photobiology/R/relative-am.r |only photobiology-0.9.20/photobiology/R/spct.absorbance.R | 8 photobiology-0.9.20/photobiology/R/spct.absorptance.R | 2 photobiology-0.9.20/photobiology/R/spct.classes.r | 4 photobiology-0.9.20/photobiology/R/spct.insert.spct.hinges.r | 1 photobiology-0.9.20/photobiology/R/spct.irrad.r | 2 photobiology-0.9.20/photobiology/R/spct.new.r | 275 ++ photobiology-0.9.20/photobiology/R/spct.operators.r | 8 photobiology-0.9.20/photobiology/R/spct.ratios.R | 4 photobiology-0.9.20/photobiology/R/spct.reflectance.r | 3 photobiology-0.9.20/photobiology/R/spct.response.R | 2 photobiology-0.9.20/photobiology/R/spct.transmittance.r | 10 photobiology-0.9.20/photobiology/R/sun.calc.r | 8 photobiology-0.9.20/photobiology/R/w.length.range2rgb.r | 2 photobiology-0.9.20/photobiology/R/water.vapour.R |only photobiology-0.9.20/photobiology/R/waveband.class.r | 153 + photobiology-0.9.20/photobiology/R/waveband.new.r | 5 photobiology-0.9.20/photobiology/R/zmspct.classes.R | 1073 +++++++++- photobiology-0.9.20/photobiology/README.md | 101 photobiology-0.9.20/photobiology/build/vignette.rds |binary photobiology-0.9.20/photobiology/inst/doc/userguide1-intro.html | 6 photobiology-0.9.20/photobiology/inst/doc/userguide2-radiation.R | 52 photobiology-0.9.20/photobiology/inst/doc/userguide2-radiation.Rmd | 115 - photobiology-0.9.20/photobiology/inst/doc/userguide2-radiation.html | 199 + photobiology-0.9.20/photobiology/inst/doc/userguide3-astronomy.R | 8 photobiology-0.9.20/photobiology/inst/doc/userguide3-astronomy.Rmd | 14 photobiology-0.9.20/photobiology/inst/doc/userguide3-astronomy.html | 41 photobiology-0.9.20/photobiology/man/as.calibration_mspct.Rd |only photobiology-0.9.20/photobiology/man/as.calibration_spct.Rd |only photobiology-0.9.20/photobiology/man/as.chroma_mspct.Rd |only photobiology-0.9.20/photobiology/man/as.chroma_spct.Rd |only photobiology-0.9.20/photobiology/man/as.cps_mspct.Rd |only photobiology-0.9.20/photobiology/man/as.cps_spct.Rd |only photobiology-0.9.20/photobiology/man/as.filter_mspct.Rd |only photobiology-0.9.20/photobiology/man/as.filter_spct.Rd |only photobiology-0.9.20/photobiology/man/as.generic_mspct.Rd | 105 photobiology-0.9.20/photobiology/man/as.generic_spct.Rd | 75 photobiology-0.9.20/photobiology/man/as.matrix-mspct.Rd |only photobiology-0.9.20/photobiology/man/as.object_mspct.Rd |only photobiology-0.9.20/photobiology/man/as.object_spct.Rd |only photobiology-0.9.20/photobiology/man/as.raw_mspct.Rd |only photobiology-0.9.20/photobiology/man/as.raw_spct.Rd |only photobiology-0.9.20/photobiology/man/as.reflector_mspct.Rd |only photobiology-0.9.20/photobiology/man/as.reflector_spct.Rd |only photobiology-0.9.20/photobiology/man/as.response_mspct.Rd |only photobiology-0.9.20/photobiology/man/as.response_spct.Rd |only photobiology-0.9.20/photobiology/man/as.source_mspct.Rd |only photobiology-0.9.20/photobiology/man/as.source_spct.Rd |only photobiology-0.9.20/photobiology/man/defunct.Rd | 4 photobiology-0.9.20/photobiology/man/dim.generic_mspct.Rd | 2 photobiology-0.9.20/photobiology/man/e_ratio.Rd | 2 photobiology-0.9.20/photobiology/man/expanse.Rd |only photobiology-0.9.20/photobiology/man/generic_mspct.Rd | 6 photobiology-0.9.20/photobiology/man/getWhereMeasured.Rd | 2 photobiology-0.9.20/photobiology/man/join_mspct.Rd | 4 photobiology-0.9.20/photobiology/man/max.Rd | 13 photobiology-0.9.20/photobiology/man/midpoint.Rd | 26 photobiology-0.9.20/photobiology/man/min.Rd | 17 photobiology-0.9.20/photobiology/man/minus-.generic_spct.Rd | 2 photobiology-0.9.20/photobiology/man/msmsply.Rd | 2 photobiology-0.9.20/photobiology/man/photobiology-package.Rd | 7 photobiology-0.9.20/photobiology/man/q_ratio.Rd | 2 photobiology-0.9.20/photobiology/man/range.Rd | 19 photobiology-0.9.20/photobiology/man/relative_AM.Rd |only photobiology-0.9.20/photobiology/man/shared_member_class.Rd | 2 photobiology-0.9.20/photobiology/man/solar_time.Rd | 2 photobiology-0.9.20/photobiology/man/source_spct.Rd | 9 photobiology-0.9.20/photobiology/man/split2mspct.Rd | 12 photobiology-0.9.20/photobiology/man/stepsize.Rd | 10 photobiology-0.9.20/photobiology/man/subset2mspct.Rd | 12 photobiology-0.9.20/photobiology/man/water_vp_sat.Rd |only photobiology-0.9.20/photobiology/vignettes/userguide2-radiation.Rmd | 115 - photobiology-0.9.20/photobiology/vignettes/userguide3-astronomy.Rmd | 14 85 files changed, 2368 insertions(+), 594 deletions(-)
Title: County-Level Estimates of Fertilizer Application in USA
Description: Compiled and cleaned the county-level estimates of fertilizer,
nitrogen and phosphorus, from 1945 to 2012 in United States of America (USA). The commercial fertilizer data were originally
generated by USGS based on the sales data of commercial fertilizer. The manure data were estimated
based on county-level population data of livestock, poultry, and other animals.
See the user manual for detailed data sources and cleaning methods.
'usfertilizer' utilized the tidyverse to clean the original data and provide
user-friendly dataframe. Please note that USGS does not endorse this package. Also data from 1986 is not available for now.
Author: Wenlong Liu [aut, cre]
Maintainer: Wenlong Liu <wliu14@ncsu.edu>
Diff between usfertilizer versions 0.1.4 dated 2018-04-02 and 0.1.5 dated 2018-04-02
DESCRIPTION | 10 MD5 | 20 - NEWS.md | 6 build/vignette.rds |binary inst/doc/Data_sources_and_cleaning.Rmd | 4 inst/doc/Data_sources_and_cleaning.html | 501 ++++++++++++++++++++++---------- inst/doc/Introduction.R | 4 inst/doc/Introduction.Rmd | 12 inst/doc/Introduction.html | 446 ++++++++++++++++++++-------- vignettes/Data_sources_and_cleaning.Rmd | 4 vignettes/Introduction.Rmd | 12 11 files changed, 716 insertions(+), 303 deletions(-)
Title: Compact and Flexible Summaries of Data
Description: A simple to use summary function that can be used with pipes
and displays nicely in the console. The default summary statistics may be
modified by the user as can the default formatting. Support for data frames
and vectors is included, and users can implement their own skim methods for
specific object types as described in a vignette. Default summaries include
support for inline spark graphs. Instructions for managing these on
specific operating systems are given in the "Using skimr" vignette and the
README.
Author: Amelia McNamara [aut],
Eduardo Arino de la Rubia [aut],
Hao Zhu [aut],
Julia Lowndes [ctb],
Shannon Ellis [aut],
Elin Waring [cre],
Michael Quinn [aut],
Hope McLeod [ctb],
Hadley Wickham [ctb],
Kirill Müller [ctb],
RStudio, Inc. [cph] (Spark functions),
Connor Kirkpatrick [ctb],
Scott Brenstuhl [ctb],
Patrick Schratz [ctb],
lbusett [ctb],
Mikko Korpela [ctb],
Jennifer Thompson [ctb],
Harris McGehee [ctb]
Maintainer: Elin Waring <elin.waring@gmail.com>
Diff between skimr versions 1.0.1 dated 2018-01-10 and 1.0.2 dated 2018-04-02
skimr-1.0.1/skimr/inst/docs |only skimr-1.0.1/skimr/inst/markdown |only skimr-1.0.1/skimr/man/inline_hist.Rd |only skimr-1.0.1/skimr/man/inline_linegraph.Rd |only skimr-1.0.1/skimr/man/kable.skim_df.Rd |only skimr-1.0.1/skimr/man/kable.summary_skim_df.Rd |only skimr-1.0.1/skimr/man/list_lengths_max.Rd |only skimr-1.0.1/skimr/man/list_lengths_median.Rd |only skimr-1.0.1/skimr/man/list_lengths_min.Rd |only skimr-1.0.1/skimr/man/list_max_length.Rd |only skimr-1.0.1/skimr/man/list_min_length.Rd |only skimr-1.0.1/skimr/man/max_char.Rd |only skimr-1.0.1/skimr/man/min_char.Rd |only skimr-1.0.1/skimr/man/n_complete.Rd |only skimr-1.0.1/skimr/man/n_empty.Rd |only skimr-1.0.1/skimr/man/n_missing.Rd |only skimr-1.0.1/skimr/man/n_unique.Rd |only skimr-1.0.1/skimr/man/pander.skim_df.Rd |only skimr-1.0.1/skimr/man/pander.summary_skim_df.Rd |only skimr-1.0.1/skimr/man/print.skim_df.Rd |only skimr-1.0.1/skimr/man/print.skim_vector.Rd |only skimr-1.0.1/skimr/man/print.summary_skim_df.Rd |only skimr-1.0.1/skimr/man/show_formats.Rd |only skimr-1.0.1/skimr/man/show_skimmers.Rd |only skimr-1.0.1/skimr/man/skim_tee.Rd |only skimr-1.0.1/skimr/man/skim_to_list.Rd |only skimr-1.0.1/skimr/man/skim_to_wide.Rd |only skimr-1.0.1/skimr/man/sorted_count.Rd |only skimr-1.0.1/skimr/man/ts_end.Rd |only skimr-1.0.1/skimr/man/ts_start.Rd |only skimr-1.0.2/skimr/DESCRIPTION | 33 skimr-1.0.2/skimr/MD5 | 125 - skimr-1.0.2/skimr/NAMESPACE | 2 skimr-1.0.2/skimr/NEWS.md | 54 skimr-1.0.2/skimr/R/formats.R | 49 skimr-1.0.2/skimr/R/functions.R | 71 skimr-1.0.2/skimr/R/kable.R |only skimr-1.0.2/skimr/R/options.R | 19 skimr-1.0.2/skimr/R/pander.R |only skimr-1.0.2/skimr/R/skim.R | 149 - skimr-1.0.2/skimr/R/skim_print.R | 204 -- skimr-1.0.2/skimr/R/skim_v.R | 4 skimr-1.0.2/skimr/R/skimr-package.R | 8 skimr-1.0.2/skimr/R/stats.R | 181 - skimr-1.0.2/skimr/R/summary.R | 73 skimr-1.0.2/skimr/R/wide.R |only skimr-1.0.2/skimr/README.md | 917 ++++++---- skimr-1.0.2/skimr/build/vignette.rds |binary skimr-1.0.2/skimr/inst/doc/Skimr_defaults.R |only skimr-1.0.2/skimr/inst/doc/Skimr_defaults.Rmd |only skimr-1.0.2/skimr/inst/doc/Skimr_defaults.html |only skimr-1.0.2/skimr/inst/doc/Supporting_additional_objects.html | 4 skimr-1.0.2/skimr/inst/doc/Using_fonts.R | 4 skimr-1.0.2/skimr/inst/doc/Using_fonts.Rmd | 28 skimr-1.0.2/skimr/inst/doc/Using_fonts.html | 54 skimr-1.0.2/skimr/inst/doc/Using_skimr.R | 49 skimr-1.0.2/skimr/inst/doc/Using_skimr.Rmd | 294 +-- skimr-1.0.2/skimr/inst/doc/Using_skimr.html | 440 ++-- skimr-1.0.2/skimr/inst/other_docs |only skimr-1.0.2/skimr/inst/rmarkdown |only skimr-1.0.2/skimr/man/kable.Rd | 78 skimr-1.0.2/skimr/man/pander.Rd |only skimr-1.0.2/skimr/man/print.Rd |only skimr-1.0.2/skimr/man/reexports.Rd | 6 skimr-1.0.2/skimr/man/skim.Rd | 82 skimr-1.0.2/skimr/man/skim_format.Rd | 44 skimr-1.0.2/skimr/man/skim_with.Rd | 54 skimr-1.0.2/skimr/man/skimr-package.Rd | 2 skimr-1.0.2/skimr/man/stats.Rd |only skimr-1.0.2/skimr/man/summary.skim_df.Rd | 6 skimr-1.0.2/skimr/man/wide.Rd |only skimr-1.0.2/skimr/tests/testthat/test-formats.R | 6 skimr-1.0.2/skimr/tests/testthat/test-functions.R | 34 skimr-1.0.2/skimr/tests/testthat/test-skim.R | 59 skimr-1.0.2/skimr/tests/testthat/test-skim_print.R | 40 skimr-1.0.2/skimr/tests/testthat/test-skim_v.R | 111 - skimr-1.0.2/skimr/tests/testthat/test-stats.R | 57 skimr-1.0.2/skimr/tests/testthat/test-summary.R | 14 skimr-1.0.2/skimr/vignettes/Skimr_defaults.Rmd |only skimr-1.0.2/skimr/vignettes/Using_fonts.Rmd | 28 skimr-1.0.2/skimr/vignettes/Using_skimr.Rmd | 294 +-- 81 files changed, 2124 insertions(+), 1553 deletions(-)
Title: EBGM Scores for Mining Large Contingency Tables
Description: An implementation of DuMouchel's (1999)
<doi:10.1080/00031305.1999.10474456> Bayesian data mining method for the
market basket problem. Calculates Empirical Bayes Geometric Mean (EBGM) and
quantile scores from the posterior distribution using the Gamma-Poisson
Shrinker (GPS) model to find unusually large cell counts in large, sparse
contingency tables. Can be used to find unusually high reporting rates of
adverse events associated with products. In general, can be used to mine any
database where the co-occurrence of two variables or items is of interest.
Also calculates relative and proportional reporting ratios. Builds on the work
of the 'PhViD' package, from which much of the code is derived. Some of the
added features include stratification to adjust for confounding variables and
data squashing to improve computational efficiency. Now includes an
implementation of the EM algorithm for hyperparameter estimation loosely
derived from the 'mederrRank' package.
Author: John Ihrie [cre, aut],
Travis Canida [aut],
Ismaïl Ahmed [ctb] (author of 'PhViD' package (derived code)),
Antoine Poncet [ctb] (author of 'PhViD'),
Sergio Venturini [ctb] (author of 'mederrRank' package (derived code)),
Jessica Myers [ctb] (author of 'mederrRank')
Maintainer: John Ihrie <John.Ihrie@fda.hhs.gov>
Diff between openEBGM versions 0.4.0 dated 2018-03-09 and 0.5.0 dated 2018-04-02
DESCRIPTION | 17 +++-- MD5 | 36 +++++------ NEWS | 8 ++ R/f_EM_hyperEstimation.R | 4 - R/f_checkInputs.R | 6 - R/f_dataSquashing.R | 58 +++++++++-------- R/f_transformInput.R | 84 ++++++++++++-------------- build/vignette.rds |binary inst/doc/x1_introAndDataPrepVignette.Rmd | 2 inst/doc/x1_introAndDataPrepVignette.html | 6 - inst/doc/x2_rawDataProcessingVignette.html | 4 - inst/doc/x3_hyperParameterVignette.Rmd | 5 - inst/doc/x3_hyperParameterVignette.html | 12 +-- inst/doc/x4_posteriorCalculationVignette.html | 4 - inst/doc/x5_openEBGMObjectVignette.html | 4 - man/hyperEM.Rd | 4 - man/processRaw.Rd | 8 +- vignettes/x1_introAndDataPrepVignette.Rmd | 2 vignettes/x3_hyperParameterVignette.Rmd | 5 - 19 files changed, 141 insertions(+), 128 deletions(-)
Title: R Commander Miscellaneous Functions
Description: Various statistical, graphics, and data-management functions used by the Rcmdr package in the R Commander GUI for R.
Author: John Fox [aut, cre],
Robert Muenchen [ctb],
Dan Putler [ctb]
Maintainer: John Fox <jfox@mcmaster.ca>
Diff between RcmdrMisc versions 1.0-9 dated 2018-03-20 and 1.0-10 dated 2018-04-02
DESCRIPTION | 10 +++++----- MD5 | 6 +++--- NEWS | 4 ++++ R/plots.R | 4 ++-- 4 files changed, 14 insertions(+), 10 deletions(-)
Title: Classification, Regression and Feature Evaluation
Description: A suite of machine learning algorithms written in C++ with the R
interface contains several learning techniques for classification and regression.
Predictive models include e.g., classification and regression trees with
optional constructive induction and models in the leaves, random forests, kNN,
naive Bayes, and locally weighted regression. All predictions obtained with these
models can be explained and visualized with the 'ExplainPrediction' package.
This package is especially strong in feature evaluation where it contains several variants of
Relief algorithm and many impurity based attribute evaluation functions, e.g., Gini,
information gain, MDL, and DKM. These methods can be used for feature selection
or discretization of numeric attributes.
The OrdEval algorithm and its visualization is used for evaluation
of data sets with ordinal features and class, enabling analysis according to the
Kano model of customer satisfaction.
Several algorithms support parallel multithreaded execution via OpenMP.
The top-level documentation is reachable through ?CORElearn.
Author: Marko Robnik-Sikonja and Petr Savicky
Maintainer: "Marko Robnik-Sikonja" <marko.robnik@fri.uni-lj.si>
Diff between CORElearn versions 1.52.0 dated 2018-01-04 and 1.52.1 dated 2018-04-02
ChangeLog | 1 + DESCRIPTION | 8 ++++---- MD5 | 7 ++++--- R/Rinterface.R | 2 +- src/platform.h |only 5 files changed, 10 insertions(+), 8 deletions(-)
Title: Lasso and Elastic-Net Regularized Generalized Linear Models
Description: Extremely efficient procedures for fitting the entire lasso or elastic-net regularization path for linear regression, logistic and multinomial regression models, Poisson regression and the Cox model. Two recent additions are the multiple-response Gaussian, and the grouped multinomial regression. The algorithm uses cyclical coordinate descent in a path-wise fashion, as described in the paper linked to via the URL below.
Author: Jerome Friedman [aut, cre],
Trevor Hastie [aut, cre],
Rob Tibshirani [aut, cre],
Noah Simon [aut, ctb],
Balasubramanian Narasimhan [ctb],
Junyang Qian [ctb]
Maintainer: Trevor Hastie <hastie@stanford.edu>
Diff between glmnet versions 2.0-13 dated 2017-09-22 and 2.0-16 dated 2018-04-02
glmnet-2.0-13/glmnet/cleanup |only glmnet-2.0-13/glmnet/configure |only glmnet-2.0-13/glmnet/configure.in |only glmnet-2.0-13/glmnet/configure.win |only glmnet-2.0-13/glmnet/inst/mortran/glmnet5.m |only glmnet-2.0-13/glmnet/src/Makevars.in |only glmnet-2.0-13/glmnet/src/Makevars.win |only glmnet-2.0-13/glmnet/src/glmnet5.f90 |only glmnet-2.0-16/glmnet/ChangeLog | 9 +++++ glmnet-2.0-16/glmnet/DESCRIPTION | 13 ++++---- glmnet-2.0-16/glmnet/MD5 | 41 +++++++++++--------------- glmnet-2.0-16/glmnet/NAMESPACE | 2 - glmnet-2.0-16/glmnet/R/cv.coxnet.R | 31 +++++++------------ glmnet-2.0-16/glmnet/R/cv.elnet.R | 31 ++++++++----------- glmnet-2.0-16/glmnet/R/cv.fishnet.R | 17 +++------- glmnet-2.0-16/glmnet/R/cv.glmnet.R | 7 +++- glmnet-2.0-16/glmnet/R/cv.lognet.R | 39 ++++++++++-------------- glmnet-2.0-16/glmnet/R/cv.mrelnet.R | 11 +----- glmnet-2.0-16/glmnet/R/cv.multnet.R | 11 ------ glmnet-2.0-16/glmnet/R/cvtype.R |only glmnet-2.0-16/glmnet/inst/doc/Coxnet.pdf |binary glmnet-2.0-16/glmnet/inst/doc/glmnet_beta.pdf |binary glmnet-2.0-16/glmnet/inst/mortran/glmnet5dp.m |only glmnet-2.0-16/glmnet/man/cv.glmnet.Rd | 2 - glmnet-2.0-16/glmnet/man/glmnet-internal.Rd | 1 glmnet-2.0-16/glmnet/man/glmnet.Rd | 7 +++- glmnet-2.0-16/glmnet/src/glmnet5dp.f |only 27 files changed, 99 insertions(+), 123 deletions(-)
Title: Companion to Applied Regression
Description: Functions to Accompany J. Fox and S. Weisberg,
An R Companion to Applied Regression, Third Edition, Sage, in press.
Author: John Fox [aut, cre],
Sanford Weisberg [aut],
Brad Price [aut],
Daniel Adler [ctb],
Douglas Bates [ctb],
Gabriel Baud-Bovy [ctb],
Ben Bolker [ctb],
Steve Ellison [ctb],
David Firth [ctb],
Michael Friendly [ctb],
Gregor Gorjanc [ctb],
Spencer Graves [ctb],
Richard Heiberger [ctb],
Rafael Laboissiere [ctb],
Martin Maechler [ctb],
Georges Monette [ctb],
Duncan Murdoch [ctb],
Henric Nilsson [ctb],
Derek Ogle [ctb],
Brian Ripley [ctb],
William Venables [ctb],
Steve Walker [ctb],
David Winsemius [ctb],
Achim Zeileis [ctb],
R-Core [ctb]
Maintainer: John Fox <jfox@mcmaster.ca>
Diff between car versions 2.1-6 dated 2017-11-19 and 3.0-0 dated 2018-04-02
car-2.1-6/car/R/RcppExports.R |only car-2.1-6/car/R/bootCase.R |only car-2.1-6/car/data |only car-2.1-6/car/man/AMSsurvey.Rd |only car-2.1-6/car/man/Adler.Rd |only car-2.1-6/car/man/Angell.Rd |only car-2.1-6/car/man/Anscombe.Rd |only car-2.1-6/car/man/Baumann.Rd |only car-2.1-6/car/man/Bfox.Rd |only car-2.1-6/car/man/Blackmore.Rd |only car-2.1-6/car/man/Burt.Rd |only car-2.1-6/car/man/CanPop.Rd |only car-2.1-6/car/man/Chile.Rd |only car-2.1-6/car/man/Chirot.Rd |only car-2.1-6/car/man/Cowles.Rd |only car-2.1-6/car/man/Davis.Rd |only car-2.1-6/car/man/DavisThin.Rd |only car-2.1-6/car/man/Depredations.Rd |only car-2.1-6/car/man/Duncan.Rd |only car-2.1-6/car/man/Ericksen.Rd |only car-2.1-6/car/man/Florida.Rd |only car-2.1-6/car/man/Freedman.Rd |only car-2.1-6/car/man/Friendly.Rd |only car-2.1-6/car/man/Ginzberg.Rd |only car-2.1-6/car/man/Greene.Rd |only car-2.1-6/car/man/Guyer.Rd |only car-2.1-6/car/man/Hartnagel.Rd |only car-2.1-6/car/man/Highway1.Rd |only car-2.1-6/car/man/KosteckiDillon.Rd |only car-2.1-6/car/man/Leinhardt.Rd |only car-2.1-6/car/man/LoBD.Rd |only car-2.1-6/car/man/Mandel.Rd |only car-2.1-6/car/man/Migration.Rd |only car-2.1-6/car/man/Moore.Rd |only car-2.1-6/car/man/Mroz.Rd |only car-2.1-6/car/man/OBrienKaiser.Rd |only car-2.1-6/car/man/Ornstein.Rd |only car-2.1-6/car/man/Pottery.Rd |only car-2.1-6/car/man/Prestige.Rd |only car-2.1-6/car/man/Quartet.Rd |only car-2.1-6/car/man/Robey.Rd |only car-2.1-6/car/man/SLID.Rd |only car-2.1-6/car/man/Sahlins.Rd |only car-2.1-6/car/man/Salaries.Rd |only car-2.1-6/car/man/Soils.Rd |only car-2.1-6/car/man/States.Rd |only car-2.1-6/car/man/Transact.Rd |only car-2.1-6/car/man/UN.Rd |only car-2.1-6/car/man/USPop.Rd |only car-2.1-6/car/man/Vocab.Rd |only car-2.1-6/car/man/WeightLoss.Rd |only car-2.1-6/car/man/Womenlf.Rd |only car-2.1-6/car/man/Wong.Rd |only car-2.1-6/car/man/Wool.Rd |only car-2.1-6/car/man/bootCase.Rd |only car-2.1-6/car/man/car-package.Rd |only car-2.1-6/car/man/plot.powerTransform.Rd |only car-3.0-0/car/DESCRIPTION | 36 car-3.0-0/car/MD5 | 362 +-- car-3.0-0/car/NAMESPACE | 684 +++--- car-3.0-0/car/NEWS | 34 car-3.0-0/car/R/Anova.R | 2981 ++++++++++++++-------------- car-3.0-0/car/R/Boot.R | 113 - car-3.0-0/car/R/Boxplot.R | 382 ++- car-3.0-0/car/R/Contrasts.R | 186 - car-3.0-0/car/R/Ellipse.R | 631 +++-- car-3.0-0/car/R/Export.R |only car-3.0-0/car/R/Import.R |only car-3.0-0/car/R/Predict.R |only car-3.0-0/car/R/S.R |only car-3.0-0/car/R/Tapply.R |only car-3.0-0/car/R/TransformationAxes.R | 234 +- car-3.0-0/car/R/adaptiveKernel.R | 48 car-3.0-0/car/R/avPlots.R | 346 +-- car-3.0-0/car/R/bcnPower.R | 218 +- car-3.0-0/car/R/boxCoxVariable.R | 22 car-3.0-0/car/R/boxTidwell.R | 144 - car-3.0-0/car/R/brief.R |only car-3.0-0/car/R/car-defunct.R |only car-3.0-0/car/R/car-deprecated.R | 192 - car-3.0-0/car/R/carWeb.R | 64 car-3.0-0/car/R/ceresPlots.R | 357 +-- car-3.0-0/car/R/compareCoefs.R | 165 + car-3.0-0/car/R/crPlots.R | 281 +- car-3.0-0/car/R/deltaMethod.R | 314 +- car-3.0-0/car/R/densityPlot.R | 266 +- car-3.0-0/car/R/dfbetaPlots.R | 225 +- car-3.0-0/car/R/durbinWatsonTest.R | 182 - car-3.0-0/car/R/hccm.R | 138 - car-3.0-0/car/R/infIndexPlot.R | 141 - car-3.0-0/car/R/influence-mixed-models.R |only car-3.0-0/car/R/influencePlot.R | 120 - car-3.0-0/car/R/invResPlot.R | 85 car-3.0-0/car/R/invTranPlot.R | 242 +- car-3.0-0/car/R/leveneTest.R | 94 car-3.0-0/car/R/leveragePlots.R | 205 + car-3.0-0/car/R/linearHypothesis.R | 1464 ++++++------- car-3.0-0/car/R/logit.R | 42 car-3.0-0/car/R/marginalModelPlot.R | 605 +++-- car-3.0-0/car/R/mcPlots.R | 334 +-- car-3.0-0/car/R/ncvTest.R | 126 - car-3.0-0/car/R/outlierTest.R | 106 car-3.0-0/car/R/panel.car.R | 24 car-3.0-0/car/R/poTest.R |only car-3.0-0/car/R/powerTransform.R | 66 car-3.0-0/car/R/powerTransformlmer.R | 18 car-3.0-0/car/R/qqPlot.R | 168 + car-3.0-0/car/R/recode.R | 146 - car-3.0-0/car/R/regLine.R | 33 car-3.0-0/car/R/residualPlots.R | 602 ++--- car-3.0-0/car/R/scatter3d.R | 1034 ++++----- car-3.0-0/car/R/scatterplot.R | 590 +++-- car-3.0-0/car/R/scatterplotMatrix.R | 568 +++-- car-3.0-0/car/R/scatterplotSmoothers.R | 119 - car-3.0-0/car/R/showLabels.R | 276 +- car-3.0-0/car/R/sigmaHat.R | 16 car-3.0-0/car/R/some.R | 49 car-3.0-0/car/R/spreadLevelPlot.R | 302 +- car-3.0-0/car/R/subsets.R | 126 - car-3.0-0/car/R/symbox.R | 66 car-3.0-0/car/R/utility-functions.R | 857 ++++---- car-3.0-0/car/R/vif.R | 29 car-3.0-0/car/R/wcrossprod.R | 50 car-3.0-0/car/R/which.names.R | 30 car-3.0-0/car/build/vignette.rds |binary car-3.0-0/car/inst/CITATION | 34 car-3.0-0/car/inst/doc/embedding.R | 376 +-- car-3.0-0/car/inst/doc/embedding.Rnw | 425 +-- car-3.0-0/car/inst/doc/embedding.pdf |binary car-3.0-0/car/man/Anova.Rd | 741 +++--- car-3.0-0/car/man/Boot.Rd | 94 car-3.0-0/car/man/Boxplot.Rd | 151 - car-3.0-0/car/man/Contrasts.Rd | 212 - car-3.0-0/car/man/Ellipses.Rd | 342 +-- car-3.0-0/car/man/Export.Rd |only car-3.0-0/car/man/Import.Rd |only car-3.0-0/car/man/Predict.Rd |only car-3.0-0/car/man/S.Rd |only car-3.0-0/car/man/ScatterplotSmoothers.Rd | 270 +- car-3.0-0/car/man/Tapply.Rd |only car-3.0-0/car/man/TransformationAxes.Rd | 273 +- car-3.0-0/car/man/avPlots.Rd | 282 +- car-3.0-0/car/man/bcPower.Rd | 49 car-3.0-0/car/man/boxCox.Rd | 27 car-3.0-0/car/man/boxCoxVariable.Rd | 122 - car-3.0-0/car/man/boxTidwell.Rd | 160 - car-3.0-0/car/man/brief.Rd |only car-3.0-0/car/man/car-defunct.Rd |only car-3.0-0/car/man/car-deprecated.Rd | 110 - car-3.0-0/car/man/carPalette.Rd |only car-3.0-0/car/man/carWeb.Rd | 94 car-3.0-0/car/man/ceresPlots.Rd | 249 +- car-3.0-0/car/man/compareCoefs.Rd | 128 - car-3.0-0/car/man/crPlots.Rd | 242 +- car-3.0-0/car/man/deltaMethod.Rd | 438 ++-- car-3.0-0/car/man/densityPlot.Rd | 239 +- car-3.0-0/car/man/dfbetaPlots.Rd | 196 - car-3.0-0/car/man/durbinWatsonTest.Rd | 128 - car-3.0-0/car/man/hccm.Rd | 190 - car-3.0-0/car/man/hist.boot.Rd | 51 car-3.0-0/car/man/infIndexPlot.Rd | 147 - car-3.0-0/car/man/influence-mixed-models.Rd |only car-3.0-0/car/man/influencePlot.Rd | 135 - car-3.0-0/car/man/invResPlot.Rd | 148 - car-3.0-0/car/man/invTranPlot.Rd | 206 - car-3.0-0/car/man/leveneTest.Rd | 120 - car-3.0-0/car/man/leveragePlots.Rd | 227 +- car-3.0-0/car/man/linearHypothesis.Rd | 808 +++---- car-3.0-0/car/man/logit.Rd | 108 - car-3.0-0/car/man/marginalModelPlot.Rd | 366 +-- car-3.0-0/car/man/mcPlots.Rd | 218 +- car-3.0-0/car/man/ncvTest.Rd | 136 - car-3.0-0/car/man/outlierTest.Rd | 155 - car-3.0-0/car/man/panel.car.Rd | 86 car-3.0-0/car/man/poTest.Rd |only car-3.0-0/car/man/powerTransform.Rd | 22 car-3.0-0/car/man/qqPlot.Rd | 269 +- car-3.0-0/car/man/recode.Rd | 156 - car-3.0-0/car/man/regLine.Rd | 96 car-3.0-0/car/man/residualPlots.Rd | 475 ++-- car-3.0-0/car/man/scatter3d.Rd | 383 +-- car-3.0-0/car/man/scatterplot.Rd | 355 +-- car-3.0-0/car/man/scatterplotMatrix.Rd | 300 +- car-3.0-0/car/man/showLabels.Rd | 228 +- car-3.0-0/car/man/sigmaHat.Rd | 64 car-3.0-0/car/man/some.Rd | 106 car-3.0-0/car/man/spreadLevelPlot.Rd | 244 +- car-3.0-0/car/man/subsets.Rd | 149 - car-3.0-0/car/man/symbox.Rd | 104 car-3.0-0/car/man/testTransform.Rd | 4 car-3.0-0/car/man/vif.Rd | 18 car-3.0-0/car/man/wcrossprod.Rd | 136 - car-3.0-0/car/man/which.names.Rd | 78 car-3.0-0/car/vignettes/embedding.Rnw | 425 +-- car-3.0-0/car/vignettes/embedding.bib | 40 195 files changed, 15229 insertions(+), 14244 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-09-27 0.1.2
Title: Spatial and Spatio-Temporal Geostatistical Modelling, Prediction
and Simulation
Description: Variogram modelling; simple, ordinary and universal point or block (co)kriging; spatio-temporal kriging; sequential Gaussian or indicator (co)simulation; variogram and variogram map plotting utility functions.
Author: Edzer Pebesma [aut, cre],
Benedikt Graeler [aut]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between gstat versions 1.1-5 dated 2017-03-12 and 1.1-6 dated 2018-04-02
DESCRIPTION | 6 +-- MD5 | 68 +++++++++++++++++------------------ NAMESPACE | 2 + R/predict.gstat.R | 19 +++++++-- build/vignette.rds |binary data/DE_RB_2005.rda |binary data/coalash.rda |binary data/fulmar.rda |binary data/jura.rda |binary data/meuse.all.rda |binary data/meuse.alt.rda |binary data/ncp.grid.rda |binary data/oxford.rda |binary data/pcb.rda |binary data/sic2004.rda |binary data/sic97.rda |binary data/tull.rda |binary data/vv.rda |binary data/walker.rda |binary data/wind.rda |binary inst/CITATION | 2 - inst/NEWS.Rd | 5 ++ inst/doc/gstat.R | 48 ++++++++++++------------ inst/doc/gstat.Rnw | 17 +++----- inst/doc/gstat.pdf |binary inst/doc/prs.pdf |binary inst/doc/spatio-temporal-kriging.pdf |binary inst/doc/st.pdf |binary src/s.c | 6 +-- src/userio.c | 2 - src/vario.c | 4 +- tests/merge.Rout.save | 16 ++++---- tests/unproj.Rout.save | 20 +++++----- tests/windst.Rout.save | 17 ++++---- vignettes/gstat.Rnw | 17 +++----- 35 files changed, 133 insertions(+), 116 deletions(-)
Title: Sparse and Dense Matrix Classes and Methods
Description: A rich hierarchy of matrix classes, including triangular,
symmetric, and diagonal matrices, both dense and sparse and with
pattern, logical and numeric entries. Numerous methods for and
operations on these matrices, using 'LAPACK' and 'SuiteSparse' libraries.
Author: Douglas Bates [aut],
Martin Maechler [aut, cre],
Timothy A. Davis [ctb] (SuiteSparse and 'cs' C libraries, notably
CHOLMOD, AMD; collaborators listed in dir(pattern =
'^[A-Z]+[.]txt$', full.names=TRUE, system.file('doc',
'SuiteSparse', package='Matrix'))),
Jens Oehlschlägel [ctb] (initial nearPD()),
Jason Riedy [ctb] (condest() and onenormest() for octave, Copyright:
Regents of the University of California),
R Core Team [ctb] (base R matrix implementation)
Maintainer: Martin Maechler <mmaechler+Matrix@gmail.com>
Diff between Matrix versions 1.2-12 dated 2017-11-15 and 1.2-13 dated 2018-04-02
DESCRIPTION | 11 +- MD5 | 149 +++++++++++++++-------------- NAMESPACE | 20 ++-- R/Auxiliaries.R | 31 +++++- R/Csparse.R | 24 ++++ R/Matrix.R | 9 - R/bind2.R | 31 +++--- R/ddenseMatrix.R | 14 -- R/diagMatrix.R | 11 +- R/dsCMatrix.R | 3 R/lgCMatrix.R | 4 R/ltCMatrix.R | 5 - R/ngCMatrix.R | 4 R/ntCMatrix.R | 6 + R/spModels.R | 14 +- R/sparseMatrix.R | 2 R/sparseVector.R | 37 ++++--- R/zzz.R | 18 +-- TODO | 15 ++- build/vignette.rds |binary inst/NEWS.Rd | 54 ++++++++++ inst/doc/Comparisons.R | 2 inst/doc/Comparisons.pdf |binary inst/doc/Design-issues.R | 4 inst/doc/Design-issues.Rnw | 29 +++-- inst/doc/Design-issues.pdf |binary inst/doc/Intro2Matrix.R | 2 inst/doc/Intro2Matrix.pdf |binary inst/doc/Introduction.R | 2 inst/doc/Introduction.pdf |binary inst/doc/sparseModels.R | 2 inst/doc/sparseModels.pdf |binary man/Diagonal.Rd | 8 - man/chol.Rd | 2 man/dpoMatrix-class.Rd | 20 ++-- man/dsyMatrix-class.Rd | 20 ++-- man/qr-methods.Rd | 27 +++-- man/rsparsematrix.Rd | 7 - src/CHMfactor.c | 5 - src/Csparse.c | 161 +++++++++++++++++++++++++++----- src/Csparse.h | 3 src/Makevars | 2 src/Mutils.c | 77 ++++++++++++--- src/Mutils.h | 26 +++-- src/TMatrix_as.c | 18 +-- src/Tsparse.c | 7 - src/chm_common.c | 33 ++++-- src/cs_utils.c | 6 - src/dense.c | 50 +++++++--- src/dgCMatrix.c | 18 +-- src/dgTMatrix.c | 2 src/dgeMatrix.c | 12 +- src/dpoMatrix.c | 6 - src/dppMatrix.c | 4 src/dspMatrix.c | 12 +- src/dsyMatrix.c | 6 - src/dtCMatrix.c | 4 src/dtpMatrix.c | 8 - src/dtrMatrix.c | 6 - src/factorizations.c | 6 - src/init.c | 1 src/ldense.c | 32 ++---- src/scripts/DEPS.mkf | 215 +++++++++++++++++++++++-------------------- src/scripts/DEPS.mkf_make.sh | 36 ++++++- src/sparseQR.c | 27 ++--- src/t_Csparse_subassign.c | 2 src/t_gCMatrix_colSums.c | 2 src/t_matrix_to_Csp.c |only tests/Simple.R | 108 ++++++++++++++++++++- tests/bind.Rout.save | 8 - tests/dtpMatrix.R | 2 tests/factorizing.R | 16 ++- tests/group-methods.R | 8 - tests/indexing.R | 29 +++-- tests/indexing.Rout.save | 68 ++++++++----- vignettes/Design-issues.Rnw | 29 +++-- 76 files changed, 1072 insertions(+), 570 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-01-23 1.0.1
2017-10-06 1.0.0
Title: Regularized Spatial Maximum Covariance Analysis
Description: Provide regularized maximum covariance analysis incorporating smoothness,
sparseness and orthogonality of couple patterns by using the alternating direction method
of multipliers algorithm. The method can be applied to either regularly or irregularly
spaced data, including 1D, 2D, and 3D (Wang and Huang, 2017 <doi:10.1002/env.2481>).
Author: Wen-Ting Wang [aut, cre], Hsin-Cheng Huang [aut]
Maintainer: Wen-Ting Wang <egpivo@gmail.com>
Diff between SpatMCA versions 1.0.0.2 dated 2017-03-17 and 1.0.1.0 dated 2018-04-02
SpatMCA-1.0.0.2/SpatMCA/README.md |only SpatMCA-1.0.1.0/SpatMCA/DESCRIPTION | 10 +- SpatMCA-1.0.1.0/SpatMCA/MD5 | 17 +-- SpatMCA-1.0.1.0/SpatMCA/R/RcppExports.R | 6 - SpatMCA-1.0.1.0/SpatMCA/R/SpatMCA.R | 28 +++--- SpatMCA-1.0.1.0/SpatMCA/man/SpatMCA-package.Rd | 4 SpatMCA-1.0.1.0/SpatMCA/man/spatmca.Rd | 41 ++++++++ SpatMCA-1.0.1.0/SpatMCA/src/Makevars.win | 5 - SpatMCA-1.0.1.0/SpatMCA/src/RcppExports.cpp | 18 +++ SpatMCA-1.0.1.0/SpatMCA/src/spatmca.cpp | 116 ++++++++++++++----------- 10 files changed, 153 insertions(+), 92 deletions(-)
Title: Omnibus Test for Genetic Association Analysis using the Rank
Normal Transformation
Description: Implementation of genetic association tests that utilize the rank based inverse normal transformation (INT). The primary contribution is an omnibus test, which synthesizes two complementary INT-based approaches. In simulations against phenotypes with skewed and heavy tailed residual distributions, the omnibus test provided valid inference in the absence of a genotypic effect, and provided power comparable to the more powerful of the component methods in the presence of a genotypic effect. Under these settings, standard linear regression often failed to control the type I error.
Author: Zachary McCaw [aut, cre]
Maintainer: Zachary McCaw <zmccaw@g.harvard.edu>
Diff between RNOmni versions 0.2.0 dated 2018-04-01 and 0.2.1 dated 2018-04-02
DESCRIPTION | 6 +++--- MD5 | 6 +++--- R/RankNormal.R | 15 +++++++++------ inst/doc/RNOmni.html | 2 +- 4 files changed, 16 insertions(+), 13 deletions(-)
Title: Generalized Farlie-Gumbel-Morgenstern Copula
Description: Compute bivariate dependence measures and perform bivariate competing risks analysis under the generalized Farlie-Gumbel-Morgenstern (FGM) copula. See Shih and Emura (2016) <doi:10.1007/s00362-016-0865-5> and Shih and Emura (2018) <doi:10.1007/s00180-018-0804-0> for details.
Author: Jia-Han Shih
Maintainer: Jia-Han Shih <tommy355097@gmail.com>
Diff between GFGM.copula versions 1.0.2 dated 2018-02-28 and 1.0.3 dated 2018-04-02
DESCRIPTION | 12 ++++++------ MD5 | 36 ++++++++++++++++++------------------ NAMESPACE | 1 + R/CvM.GFGM.BurrIII.R | 8 +++----- R/Depmeasure.GFGM.R | 2 +- R/GFGM.BurrIII.R | 6 +++--- R/MLE.GFGM.BurrIII.R | 10 ++++------ R/MLE.GFGM.spline.R | 26 +++++++++++++++++++------- R/Sdist.GFGM.BurrIII.R | 10 ++++------ R/Sdist.GFGM.spline.R | 10 ++++------ build/partial.rdb |binary man/CvM.GFGM.BurrIII.Rd | 6 ++---- man/Dependence.GFGM.Rd | 2 +- man/GFGM.BurrIII.Rd | 6 +++--- man/GFGM.copula-package.Rd | 14 ++++++++------ man/MLE.GFGM.BurrIII.Rd | 8 +++----- man/MLE.GFGM.spline.Rd | 22 +++++++++++++++++----- man/Sdist.GFGM.BurrIII.Rd | 8 +++----- man/Sdist.GFGM.spline.Rd | 8 +++----- 19 files changed, 103 insertions(+), 92 deletions(-)
Title: Derivative-Free Optimization
Description: Derivative-Free optimization algorithms. These algorithms do not require gradient information. More importantly, they can be used to solve non-smooth optimization problems.
Author: Ravi Varadhan, Johns Hopkins University, and Hans W. Borchers,
ABB Corporate Research.
Maintainer: Ravi Varadhan <ravi.varadhan@jhu.edu>
Diff between dfoptim versions 2017.12-1 dated 2017-12-20 and 2018.2-1 dated 2018-04-02
DESCRIPTION | 8 - MD5 | 12 +- NEWS | 3 R/hjk.R | 306 ++++++++++++++++++++++++++-------------------------- R/hjkb.R | 348 ++++++++++++++++++++++++++++++------------------------------ R/nmk.R | 4 R/nmkb.R | 4 7 files changed, 344 insertions(+), 341 deletions(-)
Title: Color Calculations with Emphasis on Spectral Data
Description: Calculate with spectral properties of light sources, materials, cameras, eyes, and scanners.
Build complex systems from simpler parts using a spectral product algebra. For light sources,
compute CCT and CRI. For object colors, compute optimal colors and Logvinenko coordinates.
Work with the standard CIE illuminants and color matching functions, and read spectra from
text files, including CGATS files. A user guide and 7 vignettes are included.
Author: Glenn Davis [aut, cre]
Maintainer: Glenn Davis <gdavis@gluonics.com>
Diff between colorSpec versions 0.6-2 dated 2017-12-04 and 0.7-3 dated 2018-04-02
colorSpec-0.6-2/colorSpec/R/Krinov.R |only colorSpec-0.6-2/colorSpec/inst/doc/blueflame.R |only colorSpec-0.6-2/colorSpec/inst/doc/colorSpec-guide.R |only colorSpec-0.6-2/colorSpec/inst/doc/gallery.R |only colorSpec-0.6-2/colorSpec/inst/doc/lens-aging.R |only colorSpec-0.6-2/colorSpec/inst/doc/optimals.R |only colorSpec-0.6-2/colorSpec/inst/doc/phenolred.R |only colorSpec-0.6-2/colorSpec/inst/extdata/eyes/scoptic1951.1nm.csv |only colorSpec-0.7-3/colorSpec/DESCRIPTION | 13 colorSpec-0.7-3/colorSpec/MD5 | 293 ++++---- colorSpec-0.7-3/colorSpec/NAMESPACE | 49 - colorSpec-0.7-3/colorSpec/NEWS.md | 42 + colorSpec-0.7-3/colorSpec/R/atmosphere.R |only colorSpec-0.7-3/colorSpec/R/colorSpec.CCT.R | 104 ++ colorSpec-0.7-3/colorSpec/R/colorSpec.CRI.R | 4 colorSpec-0.7-3/colorSpec/R/colorSpec.R | 324 ++++++--- colorSpec-0.7-3/colorSpec/R/colorSpec.actinometric.R |only colorSpec-0.7-3/colorSpec/R/colorSpec.calibrate.R | 32 colorSpec-0.7-3/colorSpec/R/colorSpec.comp.R | 78 +- colorSpec-0.7-3/colorSpec/R/colorSpec.daylight.R | 12 colorSpec-0.7-3/colorSpec/R/colorSpec.emulate.R |only colorSpec-0.7-3/colorSpec/R/colorSpec.ops.R | 349 +++++++--- colorSpec-0.7-3/colorSpec/R/colorSpec.photometric.R | 25 colorSpec-0.7-3/colorSpec/R/colorSpec.plot.R | 79 +- colorSpec-0.7-3/colorSpec/R/colorSpec.product.R | 152 +++- colorSpec-0.7-3/colorSpec/R/colorSpec.ptransform.R |only colorSpec-0.7-3/colorSpec/R/colorSpec.radiometric.R | 92 +- colorSpec-0.7-3/colorSpec/R/colorSpec.read.R | 40 - colorSpec-0.7-3/colorSpec/R/colorSpec.summary.R | 71 +- colorSpec-0.7-3/colorSpec/R/datasets.R | 61 - colorSpec-0.7-3/colorSpec/R/logging-levels.R | 20 colorSpec-0.7-3/colorSpec/R/logging.R | 133 ++- colorSpec-0.7-3/colorSpec/R/options.R | 268 +++---- colorSpec-0.7-3/colorSpec/R/rbind.super.R |only colorSpec-0.7-3/colorSpec/R/reparam.R | 6 colorSpec-0.7-3/colorSpec/R/sysdata.rda |binary colorSpec-0.7-3/colorSpec/R/utils.R | 130 ++- colorSpec-0.7-3/colorSpec/build/vignette.rds |binary colorSpec-0.7-3/colorSpec/data/colorSpec.rda |binary colorSpec-0.7-3/colorSpec/inst/doc/blueflame.pdf |binary colorSpec-0.7-3/colorSpec/inst/doc/blueflame.rnw | 5 colorSpec-0.7-3/colorSpec/inst/doc/colorSpec-guide.Rmd | 204 ++++- colorSpec-0.7-3/colorSpec/inst/doc/colorSpec-guide.html | 117 ++- colorSpec-0.7-3/colorSpec/inst/doc/emulation.pdf |only colorSpec-0.7-3/colorSpec/inst/doc/emulation.rnw |only colorSpec-0.7-3/colorSpec/inst/doc/gallery.pdf |binary colorSpec-0.7-3/colorSpec/inst/doc/gallery.rnw | 6 colorSpec-0.7-3/colorSpec/inst/doc/lens-aging.pdf |binary colorSpec-0.7-3/colorSpec/inst/doc/lens-aging.rnw | 8 colorSpec-0.7-3/colorSpec/inst/doc/optimals.pdf |binary colorSpec-0.7-3/colorSpec/inst/doc/phenolred.Rmd | 42 - colorSpec-0.7-3/colorSpec/inst/doc/phenolred.html | 66 + colorSpec-0.7-3/colorSpec/inst/doc/photoncounting.Rmd |only colorSpec-0.7-3/colorSpec/inst/doc/photoncounting.html |only colorSpec-0.7-3/colorSpec/inst/extdata/action/moths.txt |only colorSpec-0.7-3/colorSpec/inst/extdata/cameras/Flea2-spectral.txt | 2 colorSpec-0.7-3/colorSpec/inst/extdata/cameras/Red-Epic-Dragon.txt | 6 colorSpec-0.7-3/colorSpec/inst/extdata/cameras/Toshiba-TCD2712DG-spectral.txt | 2 colorSpec-0.7-3/colorSpec/inst/extdata/eyes/Osmia-rufa.txt | 2 colorSpec-0.7-3/colorSpec/inst/extdata/eyes/photopic1924.1nm.csv |only colorSpec-0.7-3/colorSpec/inst/extdata/eyes/photopic1978.1nm.csv |only colorSpec-0.7-3/colorSpec/inst/extdata/eyes/photopic2008.1nm.csv |only colorSpec-0.7-3/colorSpec/inst/extdata/eyes/scotopic1951.1nm.csv |only colorSpec-0.7-3/colorSpec/inst/extdata/illuminants/A.1nm.txt | 2 colorSpec-0.7-3/colorSpec/inst/extdata/illuminants/ASTMG173.txt | 4 colorSpec-0.7-3/colorSpec/inst/extdata/illuminants/B.txt | 2 colorSpec-0.7-3/colorSpec/inst/extdata/illuminants/C.txt | 2 colorSpec-0.7-3/colorSpec/inst/extdata/illuminants/D65.1nm.txt | 2 colorSpec-0.7-3/colorSpec/inst/extdata/illuminants/D65.5nm.txt | 2 colorSpec-0.7-3/colorSpec/inst/extdata/illuminants/Fs.5nm.txt | 2 colorSpec-0.7-3/colorSpec/inst/extdata/illuminants/daylight2013.txt | 2 colorSpec-0.7-3/colorSpec/inst/extdata/illuminants/solar.exposure.txt |only colorSpec-0.7-3/colorSpec/inst/extdata/illuminants/sunlight.txt | 4 colorSpec-0.7-3/colorSpec/inst/extdata/objects/NCSU.txt | 2 colorSpec-0.7-3/colorSpec/inst/extdata/objects/sunglasses.txt |only colorSpec-0.7-3/colorSpec/inst/extdata/sources/Cree-LED.txt |only colorSpec-0.7-3/colorSpec/inst/extdata/sources/Lumencor-SpectraX.txt | 2 colorSpec-0.7-3/colorSpec/inst/extdata/sources/P4-phosphor-JEDEC.txt |only colorSpec-0.7-3/colorSpec/inst/extdata/sources/Philips-HPS.txt |only colorSpec-0.7-3/colorSpec/inst/extdata/sources/firefly1922.txt | 2 colorSpec-0.7-3/colorSpec/inst/extdata/sources/firefly1964.txt | 2 colorSpec-0.7-3/colorSpec/inst/extdata/sources/moonlight.txt | 4 colorSpec-0.7-3/colorSpec/man/ABC.Rd | 4 colorSpec-0.7-3/colorSpec/man/D50.Rd | 2 colorSpec-0.7-3/colorSpec/man/D65.Rd | 2 colorSpec-0.7-3/colorSpec/man/F96T12.Rd | 2 colorSpec-0.7-3/colorSpec/man/Flea2.Rd | 6 colorSpec-0.7-3/colorSpec/man/Fluorescents.Rd | 6 colorSpec-0.7-3/colorSpec/man/HigherPasserines.Rd | 4 colorSpec-0.7-3/colorSpec/man/Hoya.Rd | 2 colorSpec-0.7-3/colorSpec/man/actinometric.Rd |only colorSpec-0.7-3/colorSpec/man/applyspec.Rd | 16 colorSpec-0.7-3/colorSpec/man/as.data.frame.Rd |only colorSpec-0.7-3/colorSpec/man/atmosphere.Rd |only colorSpec-0.7-3/colorSpec/man/bind.Rd | 66 + colorSpec-0.7-3/colorSpec/man/calibrate.Rd | 32 colorSpec-0.7-3/colorSpec/man/colorSpec-package.Rd | 13 colorSpec-0.7-3/colorSpec/man/colorSpec.Rd | 102 +- colorSpec-0.7-3/colorSpec/man/computeADL.Rd | 22 colorSpec-0.7-3/colorSpec/man/computeCCT.Rd | 100 ++ colorSpec-0.7-3/colorSpec/man/computeCRI.Rd | 32 colorSpec-0.7-3/colorSpec/man/convolvewith.Rd | 6 colorSpec-0.7-3/colorSpec/man/daylight.Rd | 4 colorSpec-0.7-3/colorSpec/man/displayRGB.Rd | 5 colorSpec-0.7-3/colorSpec/man/emulate.Rd |only colorSpec-0.7-3/colorSpec/man/extradata.Rd | 34 colorSpec-0.7-3/colorSpec/man/lightResponsivitySpectra.Rd | 18 colorSpec-0.7-3/colorSpec/man/lightSpectra.Rd | 79 +- colorSpec-0.7-3/colorSpec/man/linearize.Rd | 6 colorSpec-0.7-3/colorSpec/man/lms1971.Rd | 7 colorSpec-0.7-3/colorSpec/man/lms2000.Rd | 10 colorSpec-0.7-3/colorSpec/man/logging.Rd | 47 - colorSpec-0.7-3/colorSpec/man/luminsivity.Rd |only colorSpec-0.7-3/colorSpec/man/materialSpectra.Rd | 17 colorSpec-0.7-3/colorSpec/man/metadata.Rd | 30 colorSpec-0.7-3/colorSpec/man/multiply.Rd | 6 colorSpec-0.7-3/colorSpec/man/officialXYZ.Rd | 3 colorSpec-0.7-3/colorSpec/man/options.Rd | 55 - colorSpec-0.7-3/colorSpec/man/organization.Rd | 30 colorSpec-0.7-3/colorSpec/man/photometric.Rd | 77 +- colorSpec-0.7-3/colorSpec/man/plot.Rd | 31 colorSpec-0.7-3/colorSpec/man/plotOptimals.Rd | 15 colorSpec-0.7-3/colorSpec/man/plotPatchesRGB.Rd | 71 +- colorSpec-0.7-3/colorSpec/man/print.Rd | 14 colorSpec-0.7-3/colorSpec/man/probeOptimalColors.Rd | 31 colorSpec-0.7-3/colorSpec/man/product.Rd | 199 +++-- colorSpec-0.7-3/colorSpec/man/ptransform.Rd |only colorSpec-0.7-3/colorSpec/man/quantity.Rd | 39 - colorSpec-0.7-3/colorSpec/man/radiometric.Rd | 104 +- colorSpec-0.7-3/colorSpec/man/readCGATS.Rd | 33 colorSpec-0.7-3/colorSpec/man/readSpectra.Rd | 123 +-- colorSpec-0.7-3/colorSpec/man/resample.Rd | 77 +- colorSpec-0.7-3/colorSpec/man/scanner.Rd | 6 colorSpec-0.7-3/colorSpec/man/solar.irradiance.Rd | 39 - colorSpec-0.7-3/colorSpec/man/specnames.Rd | 13 colorSpec-0.7-3/colorSpec/man/standardRGB.Rd | 30 colorSpec-0.7-3/colorSpec/man/subset.Rd | 2 colorSpec-0.7-3/colorSpec/man/theoreticalRGB.Rd | 24 colorSpec-0.7-3/colorSpec/man/wavelength.Rd | 25 colorSpec-0.7-3/colorSpec/man/xyz1931.Rd | 2 colorSpec-0.7-3/colorSpec/man/xyz1964.Rd | 2 colorSpec-0.7-3/colorSpec/tests/test-CGATS.R | 2 colorSpec-0.7-3/colorSpec/tests/test-atmos.R |only colorSpec-0.7-3/colorSpec/tests/test-combo1.txt | 2 colorSpec-0.7-3/colorSpec/tests/test-combo2.txt | 2 colorSpec-0.7-3/colorSpec/tests/test-emulate.R |only colorSpec-0.7-3/colorSpec/tests/test-inventory.R | 2 colorSpec-0.7-3/colorSpec/tests/test-product.R | 2 colorSpec-0.7-3/colorSpec/tests/test-read.R | 31 colorSpec-0.7-3/colorSpec/tests/test-sink.R |only colorSpec-0.7-3/colorSpec/vignettes/bibliography.bib | 123 +++ colorSpec-0.7-3/colorSpec/vignettes/blueflame.rnw | 5 colorSpec-0.7-3/colorSpec/vignettes/colorSpec-guide.Rmd | 204 ++++- colorSpec-0.7-3/colorSpec/vignettes/emulation.rnw |only colorSpec-0.7-3/colorSpec/vignettes/gallery.rnw | 6 colorSpec-0.7-3/colorSpec/vignettes/lens-aging.rnw | 8 colorSpec-0.7-3/colorSpec/vignettes/phenolred.Rmd | 42 - colorSpec-0.7-3/colorSpec/vignettes/photoncounting.Rmd |only colorSpec-0.7-3/colorSpec/vignettes/tables/table-1.1.html | 17 colorSpec-0.7-3/colorSpec/vignettes/tables/table-2.1.html | 102 +- colorSpec-0.7-3/colorSpec/vignettes/tables/table-2.2.html |only colorSpec-0.7-3/colorSpec/vignettes/tables/table-5.1.html | 78 +- colorSpec-0.7-3/colorSpec/vignettes/tables/table-A.1.html | 19 colorSpec-0.7-3/colorSpec/vignettes/tables/table-A.2.html | 62 + colorSpec-0.7-3/colorSpec/vignettes/tables/table-B.1.html | 120 ++- colorSpec-0.7-3/colorSpec/vignettes/tables/table-B.2.html | 49 - colorSpec-0.7-3/colorSpec/vignettes/tables/table-B.3.html | 30 167 files changed, 3631 insertions(+), 1871 deletions(-)
Title: Bivariate Pareto Models
Description: Perform competing risks analysis under bivariate Pareto models. See Shih et al. (2018) <doi:10.1080/03610926.2018.1425450> for details.
Author: Jia-Han Shih, Wei Lee
Maintainer: Jia-Han Shih <tommy355097@gmail.com>
Diff between Bivariate.Pareto versions 1.0.1 dated 2018-03-16 and 1.0.2 dated 2018-04-02
DESCRIPTION | 9 +++++---- MD5 | 32 ++++++++++++++++---------------- NAMESPACE | 1 + R/Frank.Pareto.R | 2 +- R/Kendall.SNBP.R | 4 ++-- R/MLE.Frank.Pareto.R | 2 +- R/MLE.Frank.Pareto.com.R | 2 +- R/MLE.SN.Pareto.R | 18 ++++++++++++++++-- R/SN.Pareto.R | 4 ++-- build/partial.rdb |binary man/Bivariate.Pareto-package.Rd | 10 ++++++---- man/Frank.Pareto.Rd | 2 +- man/Kendall.SNBP.Rd | 4 ++-- man/MLE.Frank.Pareto.Rd | 2 +- man/MLE.Frank.Pareto.com.Rd | 2 +- man/MLE.SN.Pareto.Rd | 18 ++++++++++++++++-- man/SN.Pareto.Rd | 4 ++-- 17 files changed, 74 insertions(+), 42 deletions(-)
More information about Bivariate.Pareto at CRAN
Permanent link
Title: County-Level Estimates of Fertilizer Application in US
Description: Compiled and cleaned the county-level estimates of fertilizer,
nitrogen and phosphorus, from 1945 to 2012. The commercial fertilizer data were originally
generated by USGS based on the sales data of commercial fertilizer. The manure data were estimated
based on county-level population data of livestock, poultry, and other animals.
See the user manual for detailed data sources and cleaning methods.
'usfertilizer' utilized the tidyverse to clean the original data and provide
user-friendly dataframe. Please note that USGS does not endorse this package. Also data from 1986 is not available for now.
Author: Wenlong Liu [aut, cre]
Maintainer: Wenlong Liu <wliu14@ncsu.edu>
Diff between usfertilizer versions 0.1.2 dated 2018-03-23 and 0.1.4 dated 2018-04-02
usfertilizer-0.1.2/usfertilizer/R/usfertilizer.R |only usfertilizer-0.1.2/usfertilizer/man/usfertilizer-package.Rd |only usfertilizer-0.1.4/usfertilizer/DESCRIPTION | 16 - usfertilizer-0.1.4/usfertilizer/MD5 | 27 +- usfertilizer-0.1.4/usfertilizer/NEWS.md |only usfertilizer-0.1.4/usfertilizer/R/data.R | 5 usfertilizer-0.1.4/usfertilizer/R/usfertilizer-package.r |only usfertilizer-0.1.4/usfertilizer/build/vignette.rds |binary usfertilizer-0.1.4/usfertilizer/data/us_fertilizer_county.rda |binary usfertilizer-0.1.4/usfertilizer/inst/doc/Data_sources_and_cleaning.R |only usfertilizer-0.1.4/usfertilizer/inst/doc/Data_sources_and_cleaning.Rmd |only usfertilizer-0.1.4/usfertilizer/inst/doc/Data_sources_and_cleaning.html |only usfertilizer-0.1.4/usfertilizer/inst/doc/Introduction.R | 35 +- usfertilizer-0.1.4/usfertilizer/inst/doc/Introduction.Rmd | 66 +++-- usfertilizer-0.1.4/usfertilizer/inst/doc/Introduction.html | 119 +++++----- usfertilizer-0.1.4/usfertilizer/man/us_fertilizer_county.Rd | 5 usfertilizer-0.1.4/usfertilizer/man/usfertilizer.Rd |only usfertilizer-0.1.4/usfertilizer/vignettes/Data_sources_and_cleaning.Rmd |only usfertilizer-0.1.4/usfertilizer/vignettes/Introduction.Rmd | 66 +++-- 19 files changed, 191 insertions(+), 148 deletions(-)