Sat, 21 Apr 2018

Package rsvg updated to version 1.2 with previous version 1.1 dated 2017-03-21

Title: Render SVG Images into PDF, PNG, PostScript, or Bitmap Arrays
Description: Renders vector-based svg images into high-quality custom-size bitmap arrays using 'librsvg2'. The resulting bitmap can be written to e.g. png, jpeg or webp format. In addition, the package can convert images directly to various formats such as pdf or postscript.
Author: Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>)
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>

Diff between rsvg versions 1.1 dated 2017-03-21 and 1.2 dated 2018-04-21

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 10 files changed, 118 insertions(+), 87 deletions(-)

More information about rsvg at CRAN
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Package RSiteCatalyst updated to version 1.4.15 with previous version 1.4.14 dated 2018-02-16

Title: R Client for Adobe Analytics API V1.4
Description: Functions for interacting with the Adobe Analytics API V1.4 (<https://api.omniture.com/admin/1.4/rest/>).
Author: Willem Paling, Randy Zwitch & Jowanza Joseph
Maintainer: Randy Zwitch <rzwitch+rsitecatalyst@gmail.com>

Diff between RSiteCatalyst versions 1.4.14 dated 2018-02-16 and 1.4.15 dated 2018-04-21

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Package R.oo updated to version 1.22.0 with previous version 1.21.0 dated 2016-10-31

Title: R Object-Oriented Programming with or without References
Description: Methods and classes for object-oriented programming in R with or without references. Large effort has been made on making definition of methods as simple as possible with a minimum of maintenance for package developers. The package has been developed since 2001 and is now considered very stable. This is a cross-platform package implemented in pure R that defines standard S3 classes without any tricks.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>

Diff between R.oo versions 1.21.0 dated 2016-10-31 and 1.22.0 dated 2018-04-21

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Package ManlyMix updated to version 0.1.12 with previous version 0.1.11 dated 2017-11-18

Title: Manly Mixture Modeling and Model-Based Clustering
Description: The utility of this package includes finite mixture modeling and model-based clustering through Manly mixture models by Zhu and Melnykov (2016) <DOI:10.1016/j.csda.2016.01.015>. It also provides capabilities for forward and backward model selection procedures.
Author: Xuwen Zhu [aut, cre], Volodymyr Melnykov [aut], Michael Hutt [ctb, cph] (NM optimization in c), Stephen Moshier [ctb, cph] (eigen calculations in c), Rouben Rostamian [ctb, cph] (memory allocation in c)
Maintainer: Xuwen Zhu <xuwen.zhu@louisville.edu>

Diff between ManlyMix versions 0.1.11 dated 2017-11-18 and 0.1.12 dated 2018-04-21

 DESCRIPTION     |    8 ++++----
 MD5             |    6 +++---
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Package s2 updated to version 0.4-0 with previous version 0.3-0 dated 2017-12-10

Title: Google's S2 Library for Geometry on the Sphere
Description: R bindings for Google's s2 library for geometric calculations on the sphere.
Author: Ege Rubak [aut, cre], Jeroen Ooms [aut] (configure and cleanup script), Edzer Pebesma [aut] (Interface to sf), Google, Inc. [cph] (Original s2 source code)
Maintainer: Ege Rubak <rubak@math.aau.dk>

Diff between s2 versions 0.3-0 dated 2017-12-10 and 0.4-0 dated 2018-04-21

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Package RcppCWB updated to version 0.2.1 with previous version 0.1.7 dated 2018-02-20

Title: 'Rcpp' Bindings for the 'Corpus Workbench' ('CWB')
Description: 'Rcpp' Bindings for the C code of the 'Corpus Workbench' ('CWB'), an indexing and query engine to efficiently analyze large corpora (<http://cwb.sourceforge.net>). 'RcppCWB' is licensed under the GNU GPL-3, in line with the GPL-3 license of the 'CWB' (<https://www.r-project.org/ Licenses/GPL-3>). The 'CWB' relies on 'pcre' (BSD license, see <https://www.pcre.org/ licence.txt>) and 'GLib' (LGPL license, see <https://www.gnu.org/licenses/lgpl-3.0.en. html>). See the file LICENSE.note for further information. The package includes modified code of the 'rcqp' package (GPL-2, see <https://cran.r-project.org/package=rcqp>). The original work of the authors of the 'rcqp' package is acknowledged with great respect, and they are listed as authors of this package. To achieve cross-platform portability (including Windows), using 'Rcpp' for wrapper code is the approach used by 'RcppCWB'.
Author: Andreas Blaette [aut, cre], Bernard Desgraupes [aut], Sylvain Loiseau [aut], Oliver Christ [ctb], Bruno Maximilian Schulze [ctb], Stefan Evert [ctb], Arne Fitschen [ctb]
Maintainer: Andreas Blaette <andreas.blaette@uni-due.de>

Diff between RcppCWB versions 0.1.7 dated 2018-02-20 and 0.2.1 dated 2018-04-21

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More information about RcppCWB at CRAN
Permanent link

Package orloca updated to version 4.5 with previous version 4.3 dated 2017-10-24

Title: Operations Research LOCational Analysis Models
Description: Objects and methods to handle and solve the min-sum location problem, also known as Fermat-Weber problem. The min-sum location problem search for a point such that the weighted sum of the distances to the demand points are minimized. See "The Fermat-Weber location problem revisited" by Brimberg, Mathematical Programming, 1, pg. 71-76, 1995. <DOI:10.1007/BF01592245>. General global optimization algorithms are used to solve the problem, along with the adhoc Weiszfeld method, see "Sur le point pour lequel la Somme des distances de n points donnes est minimum", by Weiszfeld, Tohoku Mathematical Journal, First Series, 43, pg. 355-386, 1937.
Author: Manuel Munoz-Marquez <manuel.munoz@uca.es>
Maintainer: Manuel Munoz-Marquez <manuel.munoz@uca.es>

Diff between orloca versions 4.3 dated 2017-10-24 and 4.5 dated 2018-04-21

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More information about orloca at CRAN
Permanent link

New package mlrCPO with initial version 0.3.3
Package: mlrCPO
Title: Composable Preprocessing Operators and Pipelines for Machine Learning
Description: Toolset that enriches 'mlr' with a diverse set of preprocessing operators. Composable Preprocessing Operators ("CPO"s) are first-class R objects that can be applied to data.frames and 'mlr' "Task"s to modify data, can be attached to 'mlr' "Learner"s to add preprocessing to machine learning algorithms, and can be composed to form preprocessing pipelines.
Authors@R: c( person("Martin", "Binder", email = "ma.binder@campus.lmu.de", role = c("aut", "cre")), person("Bernd", "Bischl", email = "bernd_bischl@gmx.net", role = "ctb"), person("Michel", "Lang", email = "michellang@gmail.com", role = "ctb"), person("Lars", "Kotthoff", email = "larsko@cs.ubc.ca", role = "ctb"))
URL: https://github.com/mlr-org/mlrCPO
BugReports: https://github.com/mlr-org/mlrCPO/issues
License: BSD_2_clause + file LICENSE
Encoding: UTF-8
Depends: R (>= 3.0.2), ParamHelpers (>= 1.10), mlr (>= 2.12)
Imports: BBmisc (>= 1.11), stringi, checkmate (>= 1.8.3), methods, stats, utils, backports (>= 1.1.0)
Suggests: party, rpart, mlbench, knitr, rmarkdown, testthat, mRMRe, care, randomForestSRC, randomForest, ranger (>= 0.8.0), Rfast, FSelector, e1071, DiscriMiner, digest, lintr, Hmisc, fastICA
LazyData: yes
ByteCompile: yes
Version: 0.3.3
Collate: 'CPOHelp.R' 'fauxCPOConstructor.R' 'auxiliary.R' 'ParamSetSugar.R' 'callInterface.R' 'FormatCheck.R' 'callCPO.R' 'properties.R' 'parameters.R' 'listCPO.R' 'makeCPO.R' 'CPO_applyFun.R' 'CPO_asNumeric.R' 'operators.R' 'NULLCPO.R' 'CPO_meta.R' 'CPO_cbind.R' 'CPO_collapseFact.R' 'CPO_dropConstants.R' 'CPO_encode.R' 'CPO_filterFeatures.R' 'CPO_fixFactors.R' 'CPO_ica.R' 'CPO_impute.R' 'CPO_makeCols.R' 'CPO_missingIndicators.R' 'CPO_modelMatrix.R' 'CPO_pca.R' 'CPO_quantileBinNumerics.R' 'CPO_regrResiduals.R' 'CPO_responseFromSE.R' 'CPO_scale.R' 'CPO_scaleMaxAbs.R' 'CPO_scaleRange.R' 'CPO_select.R' 'CPO_smote.R' 'CPO_spatialSign.R' 'CPO_subsample.R' 'CPO_wrap.R' 'RetrafoState.R' 'attributes.R' 'auxhelp.R' 'composeProperties.R' 'doublecaret.R' 'inverter.R' 'learner.R' 'makeCPOHelp.R' 'print.R' 'zzz.R'
RoxygenNote: 6.0.1.9000
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2018-04-21 15:52:21 UTC; user
Author: Martin Binder [aut, cre], Bernd Bischl [ctb], Michel Lang [ctb], Lars Kotthoff [ctb]
Maintainer: Martin Binder <ma.binder@campus.lmu.de>
Repository: CRAN
Date/Publication: 2018-04-21 21:49:58 UTC

More information about mlrCPO at CRAN
Permanent link

Package leaflet.extras updated to version 1.0.0 with previous version 0.2 dated 2017-06-25

Title: Extra Functionality for 'leaflet' Package
Description: The 'leaflet' JavaScript library provides many plugins some of which are available in the core 'leaflet' package, but there are many more. It is not possible to support them all in the core 'leaflet' package. This package serves as an add-on to the 'leaflet' package by providing extra functionality via 'leaflet' plugins.
Author: Bhaskar Karambelkar [aut, cre], Barret Schloerke [aut], Bangyou Zheng [ctb] (Leaflet-search and Leaflet-GPS plugin integration), Robin Cura [ctb] (Fixes for Draw Options), Markus Voge [ctb] (Enhancements for Draw Options), Markus Dumke [ctb] (Bounce Marker addition), Mapbox [ctb, cph] (leaflet-omnivore, csv2geojson, and togeojson libraries), Henry Thasler [ctb, cph] (Leaflet.Geodesic library), Dennis Wilhelm [ctb, cph] (Leaflet.StyleEditor library), Kirollos Risk [ctb, cph] (fuse.js library), Tim Wisniewski [ctb, cph] (leaflet-choropleth library), Leaflet [ctb, cph] (leaflet-draw library), Alexander Milevski [ctb, cph] (leaflet-draw-drag library), John Firebaugh [ctb, cph] (leaflet-fullscreen library), Stefano Cudini [ctb, cph] (leaflet-gps library), Johannes Rudolph [ctb, cph] (leaflet-hash library), Per Liedman [ctb, cph] (leaflet-measure-path library), Pavel Shramov [ctb, cph] (leaflet-plugins library), Filip Zavadil [ctb, cph] (leaflet-pulse-icon library), Stefano Cudini [ctb, cph] (leaflet-search library), CliffCloud [ctb, cph] (leaflet-sleep library), Ursudio [ctb, cph] (leaflet-webgl-heatmap library), Maxime Hadjinlian [ctb, cph] (leaflet.BounceMarker library), Vladimir Agafonkin [ctb, cph] (leaflet.heat library), Iván Sánchez Ortega [ctb, cph] (leaflet.tilelayer.pouchdbcached library), Dale Harvey [ctb, cph] (pouchdb-browser library), Mike Bostock [ctb, cph] (topojson library)
Maintainer: Bhaskar Karambelkar <bhaskarvk@gmail.com>

Diff between leaflet.extras versions 0.2 dated 2017-06-25 and 1.0.0 dated 2018-04-21

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 75 files changed, 2464 insertions(+), 1133 deletions(-)

More information about leaflet.extras at CRAN
Permanent link

Package Gmisc updated to version 1.6.1 with previous version 1.5 dated 2017-10-19

Title: Descriptive Statistics, Transition Plots, and More
Description: Tools for making the descriptive "Table 1" used in medical articles, a transition plot for showing changes between categories, flow charts by extending the grid package, a method for variable selection based on the SVD, Bézier lines with arrows complementing the ones in the 'grid' package, and more.
Author: Max Gordon <max@gforge.se>
Maintainer: Max Gordon <max@gforge.se>

Diff between Gmisc versions 1.5 dated 2017-10-19 and 1.6.1 dated 2018-04-21

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More information about Gmisc at CRAN
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Package FHDI updated to version 1.2.4 with previous version 1.2.3 dated 2018-04-19

Title: Fractional Hot Deck and Fully Efficient Fractional Imputation
Description: Impute general multivariate missing data with the fractional hot deck imputation based on Jaekwang Kim (2011) <doi:10.1093/biomet/asq073>.
Author: Jongho Im [aut], Inho Cho [aut, cre], Jaekwang Kim [aut]
Maintainer: Inho Cho <icho@iastate.edu>

Diff between FHDI versions 1.2.3 dated 2018-04-19 and 1.2.4 dated 2018-04-21

 DESCRIPTION |    6 +--
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 3 files changed, 67 insertions(+), 37 deletions(-)

More information about FHDI at CRAN
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Package diffusr updated to version 0.1.3 with previous version 0.1.2 dated 2017-10-29

Title: Network Diffusion Algorithms
Description: Implementation of network diffusion algorithms such as heat diffusion or Markov random walks. Network diffusion algorithms generally spread information in the form of node weights along the edges of a graph to other nodes. These weights can for example be interpreted as temperature, an initial amount of water, the activation of neurons in the brain, or the location of a random surfer in the internet. The information (node weights) is iteratively propagated to other nodes until a equilibrium state or stop criterion occurs.
Author: Simon Dirmeier [aut, cre]
Maintainer: Simon Dirmeier <simon.dirmeier@gmx.de>

Diff between diffusr versions 0.1.2 dated 2017-10-29 and 0.1.3 dated 2018-04-21

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More information about diffusr at CRAN
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Package amt updated to version 0.0.4.0 with previous version 0.0.3.0 dated 2018-03-22

Title: Animal Movement Tools
Description: Manage and analyze animal movement data. The functionality of 'amt' includes methods to calculate track statistics (e.g. step lengths, speed, or turning angles), prepare data for fitting habitat selection analyses (resource and step-selection functions), and simulation of space-use from fitted step-selection functions.
Author: Johannes Signer [aut, cre]
Maintainer: Johannes Signer <jsigner@gwdg.de>

Diff between amt versions 0.0.3.0 dated 2018-03-22 and 0.0.4.0 dated 2018-04-21

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Package kerndwd updated to version 2.0.2 with previous version 2.0.1 dated 2017-07-18

Title: Distance Weighted Discrimination (DWD) and Kernel Methods
Description: A novel implementation that solves the linear distance weighted discrimination and the kernel distance weighted discrimination.
Author: Boxiang Wang <boxiang@umn.edu>, Hui Zou <hzou@stat.umn.edu>
Maintainer: Boxiang Wang <boxiang@umn.edu>

Diff between kerndwd versions 2.0.1 dated 2017-07-18 and 2.0.2 dated 2018-04-21

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More information about kerndwd at CRAN
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Package Greg updated to version 1.2.2 with previous version 1.2.1 dated 2018-03-20

Title: Regression Helper Functions
Description: Methods for manipulating regression models and for describing these in a style adapted for medical journals. Contains functions for generating an HTML table with crude and adjusted estimates, plotting hazard ratio, plotting model estimates and confidence intervals using forest plots, extending this to comparing multiple models in a single forest plots. In addition to the descriptive methods, there are add-ons for the robust covariance matrix provided by the 'sandwich' package, a function for adding non-linearities to a model, and a wrapper around the 'Epi' package's Lexis() functions for time-splitting a dataset when modeling non-proportional hazards in Cox regressions.
Author: Max Gordon [aut, cre], Reinhard Seifert [aut] (Author of original plotHR)
Maintainer: Max Gordon <max@gforge.se>

Diff between Greg versions 1.2.1 dated 2018-03-20 and 1.2.2 dated 2018-04-21

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Package smovie updated to version 1.0.1 with previous version 1.0.0 dated 2018-03-05

Title: Some Movies to Illustrate Concepts in Statistics
Description: Provides movies to help students to understand statistical concepts. The 'rpanel' package <https://cran.r-project.org/package=rpanel> is used to create interactive plots that move to illustrate key statistical ideas and methods. There are movies to: visualise probability distributions (including user-supplied ones); illustrate sampling distributions of the sample mean (central limit theorem), the sample maximum (extremal types theorem) and (the Fisher transformation of the) Pearson product moment correlation coefficient; examine the influence of an individual observation in simple linear regression; illustrate key concepts in statistical hypothesis testing. Also provided are dpqr functions for the distribution of the Fisher transformation of the correlation coefficient under sampling from a bivariate normal distribution.
Author: Paul J. Northrop [aut, cre, cph]
Maintainer: Paul J. Northrop <p.northrop@ucl.ac.uk>

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Package TSEtools updated to version 0.1.1 with previous version 0.1.0 dated 2018-01-08

Title: Download and Manage Data from Tehran Stock Exchange
Description: Tools for downloading and organizing data from Tehran Stock Exchange (TSE) <http://new.tse.ir/en/>. It also performs some descriptive data analysis for assets.
Author: Ali Saeb
Maintainer: Ali Saeb <ali.saeb@gmail.com>

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Package clickR updated to version 0.3.64 with previous version 0.3.38 dated 2017-10-29

Title: Fix Data and Create Report Tables from Different Objects
Description: Tools for assessing data quality, performing exploratory analysis, fixing data errors in numerical, factor and date variables and creating report tables from models and summaries.
Author: Victoria Fornes Ferrer, David Hervas Marin
Maintainer: David Hervas Marin <ddhervas@yahoo.es>

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Package autoplotly updated to version 0.1.2 with previous version 0.1.1 dated 2018-02-11

Title: Automatic Generation of Interactive Visualizations for Statistical Results
Description: Functionalities to automatically generate interactive visualizations for statistical results supported by 'ggfortify', such as time series, PCA, clustering and survival analysis, with 'plotly.js' <https://plot.ly/> and 'ggplot2' style. The generated visualizations can also be easily extended using 'ggplot2' and 'plotly' syntax while staying interactive.
Author: Yuan Tang [aut, cre] (<https://orcid.org/0000-0001-5243-233X>)
Maintainer: Yuan Tang <terrytangyuan@gmail.com>

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Package fgui updated to version 1.0-8 with previous version 1.0-5 dated 2012-12-27

Title: Function GUI
Description: Rapidly create a GUI interface for a function you created by automatically creating widgets for arguments of the function. Automatically parses help routines for context-sensitive help to these arguments. The interface essentially a wrapper to some Tcl/Tk routines to both simplify and facilitate GUI creation. More advanced Tcl/Tk routines/GUI objects can be incorporated into the interface for greater customization for the more experienced.
Author: Thomas Hoffmann <tjhoffm@gmail.com>
Maintainer: Thomas Hoffmann <tjhoffm@gmail.com>

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Package expoRkit updated to version 0.9.1 with previous version 0.9 dated 2012-10-08

Title: Expokit in R
Description: An R-interface to the Fortran package Expokit.
Author: Roger B. Sidje [aut, cph], Niels Richard Hansen [aut, cre, cph]
Maintainer: Niels Richard Hansen <Niels.R.Hansen@math.ku.dk>

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Package bigleaf updated to version 0.6.1 with previous version 0.5.2 dated 2018-04-10

Title: Physical and Physiological Ecosystem Properties from Eddy Covariance Data
Description: Calculation of physical (e.g. aerodynamic conductance, surface temperature), and physiological (e.g. canopy conductance, water-use efficiency) ecosystem properties from eddy covariance data and accompanying meteorological measurements. Calculations assume the land surface to behave like a 'big-leaf' and return bulk ecosystem/canopy variables.
Author: Juergen Knauer [aut, cre], Soenke Zaehle [ctb], Tarek El-Madany [ctb], Mirco Migliavacca [ctb]
Maintainer: Juergen Knauer <jknauer@bgc-jena.mpg.de>

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Package ASIP (with last version 0.3.2) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2017-09-15 0.3.2
2017-07-20 0.3
2017-07-20 0.3.1

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Package openCR updated to version 1.1.2 with previous version 1.1.1 dated 2018-04-12

Title: Open Population Capture-Recapture
Description: Functions for the analysis of capture-recapture data from animal populations subject to turnover. The models extend Schwarz and Arnason (1996) <DOI:10.2307/2533048> and Borchers and Efford (2008) <DOI:10.1111/j.1541-0420.2007.00927.x>, and may be non-spatial or spatial. The parameterisation of recruitment is flexible (options include population growth rate and per capita recruitment). Spatially explicit analyses may assume home-range centres are fixed or allow dispersal between sampling sessions.
Author: Murray Efford [aut, cre] (<https://orcid.org/0000-0001-5231-5184>)
Maintainer: Murray Efford <murray.efford@otago.ac.nz>

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Package httpuv updated to version 1.4.1 with previous version 1.4.0 dated 2018-04-19

Title: HTTP and WebSocket Server Library
Description: Provides low-level socket and protocol support for handling HTTP and WebSocket requests directly from within R. It is primarily intended as a building block for other packages, rather than making it particularly easy to create complete web applications using httpuv alone. httpuv is built on top of the libuv and http-parser C libraries, both of which were developed by Joyent, Inc. (See LICENSE file for libuv and http-parser license information.)
Author: Joe Cheng, Hector Corrada Bravo [ctb], Jeroen Ooms [ctb], Winston Chang [ctb]
Maintainer: Joe Cheng <joe@rstudio.com>

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Package aftgee updated to version 1.1-0 with previous version 1.0-0 dated 2014-11-13

Title: Accelerated Failure Time Model with Generalized Estimating Equations
Description: A collection of methods for both the rank-based estimates and least square estimates to the Accelerated Failure Time (AFT) model. For rank-based estimation, it provides approaches that include the computationally efficient Gehan's weight and the general's weight such as the logrank weight. Details of the rank-based estimation can be found in Chiou et al. (2014) <doi:10.1007/s11222-013-9388-2> and Chiou et al. (2015) <doi:10.1002/sim.6415>. For the least-square estimation, the estimating equation is solved with Generalized Estimating Equations (GEE). Moreover, in multivariate cases, the dependence working correlation structure can be specified in GEE's setting. Details on the least-squares estimation can be found in Chiou et al. (2014) <doi:10.1007/s10985-014-9292-x>.
Author: Sy Han (Steven) Chiou, Sangwook Kang, Jun Yan
Maintainer: Sy Han (Steven) Chiou <schiou@utdallas.edu>

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