Title: Odds Ratio Estimation and Power Calculation for the Trend in
Trend Model
Description: Estimation of causal odds ratio and power calculation given trends in exposure prevalence and outcome frequencies of stratified data.
Author: Xinyao Ji and Ashkan Ertefaie
Maintainer: Ashkan Ertefaie <ashkan_ertefaie@urmc.rochester.edu>
Diff between TrendInTrend versions 1.0.2 dated 2017-08-22 and 1.1.2 dated 2018-06-14
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- R/TrendInTrend.R | 28 +++++++++++++++------------- man/OR.Rd | 16 +++++++++------- man/ttdetect.Rd | 5 ++++- man/ttpower.Rd | 4 ++++ 6 files changed, 41 insertions(+), 30 deletions(-)
Title: Basics Menu for Radiant: Business Analytics using R and Shiny
Description: The Radiant Basics menu includes interfaces for probability
calculation, central limit theorem simulation, comparing means and proportions,
goodness-of-fit testing, cross-tabs, and correlation. The application extends
the functionality in radiant.data.
Author: Vincent Nijs [aut, cre]
Maintainer: Vincent Nijs <radiant@rady.ucsd.edu>
Diff between radiant.basics versions 0.8.0 dated 2017-04-27 and 0.9.5 dated 2018-06-14
radiant.basics-0.8.0/radiant.basics/inst/app/tools/analysis/clt.R |only radiant.basics-0.8.0/radiant.basics/man/plot.correlation_.Rd |only radiant.basics-0.8.0/radiant.basics/man/summary.correlation_.Rd |only radiant.basics-0.8.0/radiant.basics/tests/urls |only radiant.basics-0.9.5/radiant.basics/DESCRIPTION | 26 radiant.basics-0.9.5/radiant.basics/MD5 | 229 radiant.basics-0.9.5/radiant.basics/NAMESPACE | 29 radiant.basics-0.9.5/radiant.basics/NEWS.md | 71 radiant.basics-0.9.5/radiant.basics/R/aaa.R | 19 radiant.basics-0.9.5/radiant.basics/R/clt.R |only radiant.basics-0.9.5/radiant.basics/R/compare_means.R | 399 - radiant.basics-0.9.5/radiant.basics/R/compare_props.R | 356 - radiant.basics-0.9.5/radiant.basics/R/correlation.R | 234 radiant.basics-0.9.5/radiant.basics/R/cross_tabs.R | 526 - radiant.basics-0.9.5/radiant.basics/R/goodness.R | 325 radiant.basics-0.9.5/radiant.basics/R/prob_calc.R | 3334 +++++----- radiant.basics-0.9.5/radiant.basics/R/radiant.R | 40 radiant.basics-0.9.5/radiant.basics/R/single_mean.R | 277 radiant.basics-0.9.5/radiant.basics/R/single_prop.R | 287 radiant.basics-0.9.5/radiant.basics/README.md | 70 radiant.basics-0.9.5/radiant.basics/inst/app/global.R | 4 radiant.basics-0.9.5/radiant.basics/inst/app/help.R | 28 radiant.basics-0.9.5/radiant.basics/inst/app/init.R | 47 radiant.basics-0.9.5/radiant.basics/inst/app/server.R | 23 radiant.basics-0.9.5/radiant.basics/inst/app/tools/analysis/clt_ui.R |only radiant.basics-0.9.5/radiant.basics/inst/app/tools/analysis/compare_means_ui.R | 210 radiant.basics-0.9.5/radiant.basics/inst/app/tools/analysis/compare_props_ui.R | 205 radiant.basics-0.9.5/radiant.basics/inst/app/tools/analysis/correlation_ui.R | 190 radiant.basics-0.9.5/radiant.basics/inst/app/tools/analysis/cross_tabs_ui.R | 152 radiant.basics-0.9.5/radiant.basics/inst/app/tools/analysis/goodness_ui.R | 150 radiant.basics-0.9.5/radiant.basics/inst/app/tools/analysis/prob_calc_ui.R | 861 +- radiant.basics-0.9.5/radiant.basics/inst/app/tools/analysis/single_mean_ui.R | 180 radiant.basics-0.9.5/radiant.basics/inst/app/tools/analysis/single_prop_ui.R | 183 radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/clt.md | 4 radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/compare_means.md | 7 radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/compare_props.md | 6 radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/correlation.md | 12 radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/cross_tabs.md | 10 radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/compare_means_plot.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/compare_means_prob_calc.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/compare_means_summary.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/compare_means_summary_additional.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/compare_props_plot.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/compare_props_prob_calc.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/correlation_plot.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/correlation_summary.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/cross_tabs_chi_pvalue.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/cross_tabs_plot.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/cross_tabs_summary.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/goodness_chi_pvalue.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/prob_calc_batteries.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/prob_calc_headphones.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/prob_calc_icecream.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/single_mean_plot.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/single_mean_prob_calc.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/single_prop_prob_calc_p.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/single_prop_prob_calc_v.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/figures/single_prop_summary.png |binary radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/goodness.md | 8 radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/prob_calc.Rmd | 8 radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/prob_calc.md | 8 radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/single_mean.md | 8 radiant.basics-0.9.5/radiant.basics/inst/app/tools/help/single_prop.md | 7 radiant.basics-0.9.5/radiant.basics/inst/app/ui.R | 16 radiant.basics-0.9.5/radiant.basics/inst/app/www/js/run_return.js | 48 radiant.basics-0.9.5/radiant.basics/man/clt.Rd |only radiant.basics-0.9.5/radiant.basics/man/compare_means.Rd | 11 radiant.basics-0.9.5/radiant.basics/man/compare_props.Rd | 9 radiant.basics-0.9.5/radiant.basics/man/correlation.Rd | 16 radiant.basics-0.9.5/radiant.basics/man/cross_tabs.Rd | 12 radiant.basics-0.9.5/radiant.basics/man/goodness.Rd | 13 radiant.basics-0.9.5/radiant.basics/man/plot.clt.Rd |only radiant.basics-0.9.5/radiant.basics/man/plot.compare_means.Rd | 6 radiant.basics-0.9.5/radiant.basics/man/plot.compare_props.Rd | 6 radiant.basics-0.9.5/radiant.basics/man/plot.correlation.Rd |only radiant.basics-0.9.5/radiant.basics/man/plot.cross_tabs.Rd | 5 radiant.basics-0.9.5/radiant.basics/man/plot.goodness.Rd | 13 radiant.basics-0.9.5/radiant.basics/man/plot.prob_binom.Rd | 11 radiant.basics-0.9.5/radiant.basics/man/plot.prob_chisq.Rd | 7 radiant.basics-0.9.5/radiant.basics/man/plot.prob_disc.Rd | 8 radiant.basics-0.9.5/radiant.basics/man/plot.prob_expo.Rd | 7 radiant.basics-0.9.5/radiant.basics/man/plot.prob_fdist.Rd | 7 radiant.basics-0.9.5/radiant.basics/man/plot.prob_lnorm.Rd |only radiant.basics-0.9.5/radiant.basics/man/plot.prob_norm.Rd | 12 radiant.basics-0.9.5/radiant.basics/man/plot.prob_pois.Rd | 11 radiant.basics-0.9.5/radiant.basics/man/plot.prob_tdist.Rd | 7 radiant.basics-0.9.5/radiant.basics/man/plot.prob_unif.Rd | 7 radiant.basics-0.9.5/radiant.basics/man/plot.single_mean.Rd | 4 radiant.basics-0.9.5/radiant.basics/man/plot.single_prop.Rd | 10 radiant.basics-0.9.5/radiant.basics/man/print.rcorr.Rd |only radiant.basics-0.9.5/radiant.basics/man/prob_binom.Rd | 8 radiant.basics-0.9.5/radiant.basics/man/prob_chisq.Rd | 4 radiant.basics-0.9.5/radiant.basics/man/prob_disc.Rd | 8 radiant.basics-0.9.5/radiant.basics/man/prob_expo.Rd | 4 radiant.basics-0.9.5/radiant.basics/man/prob_fdist.Rd | 4 radiant.basics-0.9.5/radiant.basics/man/prob_lnorm.Rd |only radiant.basics-0.9.5/radiant.basics/man/prob_norm.Rd | 9 radiant.basics-0.9.5/radiant.basics/man/prob_pois.Rd | 4 radiant.basics-0.9.5/radiant.basics/man/prob_tdist.Rd | 15 radiant.basics-0.9.5/radiant.basics/man/prob_unif.Rd | 6 radiant.basics-0.9.5/radiant.basics/man/radiant.basics.Rd | 7 radiant.basics-0.9.5/radiant.basics/man/radiant.basics_viewer.Rd |only radiant.basics-0.9.5/radiant.basics/man/radiant.basics_window.Rd |only radiant.basics-0.9.5/radiant.basics/man/single_mean.Rd | 4 radiant.basics-0.9.5/radiant.basics/man/single_prop.Rd | 6 radiant.basics-0.9.5/radiant.basics/man/summary.compare_means.Rd | 6 radiant.basics-0.9.5/radiant.basics/man/summary.compare_props.Rd | 3 radiant.basics-0.9.5/radiant.basics/man/summary.correlation.Rd |only radiant.basics-0.9.5/radiant.basics/man/summary.cross_tabs.Rd | 5 radiant.basics-0.9.5/radiant.basics/man/summary.goodness.Rd | 6 radiant.basics-0.9.5/radiant.basics/man/summary.prob_binom.Rd | 11 radiant.basics-0.9.5/radiant.basics/man/summary.prob_chisq.Rd | 11 radiant.basics-0.9.5/radiant.basics/man/summary.prob_disc.Rd | 8 radiant.basics-0.9.5/radiant.basics/man/summary.prob_expo.Rd | 11 radiant.basics-0.9.5/radiant.basics/man/summary.prob_fdist.Rd | 11 radiant.basics-0.9.5/radiant.basics/man/summary.prob_lnorm.Rd |only radiant.basics-0.9.5/radiant.basics/man/summary.prob_norm.Rd | 16 radiant.basics-0.9.5/radiant.basics/man/summary.prob_pois.Rd | 11 radiant.basics-0.9.5/radiant.basics/man/summary.prob_tdist.Rd | 11 radiant.basics-0.9.5/radiant.basics/man/summary.prob_unif.Rd | 11 radiant.basics-0.9.5/radiant.basics/man/summary.single_mean.Rd | 4 radiant.basics-0.9.5/radiant.basics/man/summary.single_prop.Rd | 4 radiant.basics-0.9.5/radiant.basics/tests/testthat/test_stats.R | 80 123 files changed, 5193 insertions(+), 3874 deletions(-)
More information about radiant.basics at CRAN
Permanent link
Title: Dirichlet Process Bayesian Clustering, Profile Regression
Description: Bayesian clustering using a Dirichlet process mixture model. This model is an alternative to regression models, non-parametrically linking a response vector to covariate data through cluster membership. The package allows Bernoulli, Binomial, Poisson, Normal, survival and categorical response, as well as Normal and discrete covariates. It also allows for fixed effects in the response model, where a spatial CAR (conditional autoregressive) term can be also included. Additionally, predictions may be made for the response, and missing values for the covariates are handled. Several samplers and label switching moves are implemented along with diagnostic tools to assess convergence. A number of R functions for post-processing of the output are also provided. In addition to fitting mixtures, it may additionally be of interest to determine which covariates actively drive the mixture components. This is implemented in the package as variable selection. The main reference for the package is Liverani, Hastie, Azizi, Papathomas and Richardson (2015) <doi:10.18637/jss.v064.i07>.
Author: David I. Hastie, Silvia Liverani <liveranis@gmail.com> and Sylvia Richardson with contributions from Aurore J. Lavigne, Lucy Leigh, Lamiae Azizi, Xi Liu, Ruizhu Huang, Austin Gratton, Wei Jing
Maintainer: Silvia Liverani <liveranis@gmail.com>
Diff between PReMiuM versions 3.1.7 dated 2018-04-01 and 3.1.8 dated 2018-06-14
ChangeLog | 9 DESCRIPTION | 12 MD5 | 44 NAMESPACE | 1 R/postProcess.R | 6192 ++++++++++++++++++------------------ man/PReMiuM-package.Rd | 4 man/margModelPosterior.Rd | 2 man/profRegr.Rd | 4 man/setHyperparams.Rd | 7 man/simBenchmark.Rd |only src/PReMiuM.cpp | 9 src/include/PReMiuMData.h | 2 src/include/PReMiuMIO.h | 117 src/include/PReMiuMModel.h | 91 src/include/PReMiuMOptions.h | 15 src/include/PReMiuMProposals.h | 100 tests/testthat/output_alpha.txt |only tests/testthat/output_alphaProp.txt |only tests/testthat/output_beta.txt |only tests/testthat/output_betaProp.txt |only tests/testthat/output_entropy.txt |only tests/testthat/output_input.txt |only tests/testthat/output_log.txt |only tests/testthat/output_logPost.txt |only tests/testthat/output_nClusters.txt |only tests/testthat/output_nMembers.txt |only tests/testthat/output_phi.txt |only tests/testthat/output_psi.txt |only tests/testthat/output_theta.txt |only tests/testthat/output_thetaProp.txt |only tests/testthat/output_z.txt |only 31 files changed, 3481 insertions(+), 3128 deletions(-)
Title: Polynomial Spline Routines
Description: Routines for the polynomial spline fitting routines
hazard regression, hazard estimation with flexible tails, logspline,
lspec, polyclass, and polymars, by C. Kooperberg and co-authors.
Author: Charles Kooperberg <clk@fredhutch.org>
Maintainer: Charles Kooperberg <clk@fredhutch.org>
Diff between polspline versions 1.1.12 dated 2015-07-14 and 1.1.13 dated 2018-06-14
DESCRIPTION | 8 +-- MD5 | 23 ++++---- NAMESPACE | 2 R/polspline.R | 4 + src/allpack.f | 19 ++++--- src/hareall.c | 8 +-- src/heftall.c | 9 +-- src/lsdall.c | 113 ++++++++++++++++++++++++++------------------ src/lspecall.c | 19 ++++--- src/nlsd.c | 49 +++++++++++-------- src/polyall.c | 4 + src/polymars.c | 61 +++-------------------- src/registerDynamicSymbol.c |only 13 files changed, 158 insertions(+), 161 deletions(-)
Title: Logic Regression
Description: Routines for fitting Logic Regression models.
Author: Charles Kooperberg <clk@fredhutch.org> and Ingo Ruczinski <ingo@jhu.edu>
Maintainer: Charles Kooperberg <clk@fredhutch.org>
Diff between LogicReg versions 1.5.9 dated 2016-08-30 and 1.5.10 dated 2018-06-14
DESCRIPTION | 8 ++++---- MD5 | 10 ++++++---- NAMESPACE | 2 +- man/LogicReg-internal.Rd |only man/logreg.Rd | 10 +++++----- src/registerDynamicSymbol.c |only src/slogic.f | 18 ++++++++++++++++++ 7 files changed, 34 insertions(+), 14 deletions(-)
Title: Tools for R Markdown to Docx Documents
Description: A set of helper functions for using R Markdown to create documents
in docx format, especially documents for use in a classroom or workshop
setting.
Author: Richard Layton [aut, cre]
Maintainer: Richard Layton <graphdoctor@gmail.com>
Diff between docxtools versions 0.1.1 dated 2017-03-12 and 0.1.2 dated 2018-06-14
docxtools-0.1.1/docxtools/vignettes/example-docx.png |only docxtools-0.1.2/docxtools/DESCRIPTION | 24 docxtools-0.1.2/docxtools/MD5 | 105 docxtools-0.1.2/docxtools/NAMESPACE | 39 docxtools-0.1.2/docxtools/NEWS.md |only docxtools-0.1.2/docxtools/R/align_pander.R | 74 docxtools-0.1.2/docxtools/R/data.R |only docxtools-0.1.2/docxtools/R/docxtools.R | 23 docxtools-0.1.2/docxtools/R/format_engr.R | 421 ++- docxtools-0.1.2/docxtools/R/put_axes.R | 106 docxtools-0.1.2/docxtools/R/put_gap.R | 24 docxtools-0.1.2/docxtools/README.md |only docxtools-0.1.2/docxtools/build/vignette.rds |binary docxtools-0.1.2/docxtools/data |only docxtools-0.1.2/docxtools/inst/WORDLIST |only docxtools-0.1.2/docxtools/inst/doc/introduction-to-docxtools.Rmd | 7 docxtools-0.1.2/docxtools/inst/doc/introduction-to-docxtools.html | 194 + docxtools-0.1.2/docxtools/inst/doc/numbers-in-engineering-format.R | 112 docxtools-0.1.2/docxtools/inst/doc/numbers-in-engineering-format.Rmd | 261 +- docxtools-0.1.2/docxtools/inst/doc/numbers-in-engineering-format.html | 1122 ++++++---- docxtools-0.1.2/docxtools/inst/doc/put-workspace-in-docx.R | 102 docxtools-0.1.2/docxtools/inst/doc/put-workspace-in-docx.Rmd | 145 - docxtools-0.1.2/docxtools/inst/doc/put-workspace-in-docx.html | 431 ++- docxtools-0.1.2/docxtools/man/align_pander.Rd | 22 docxtools-0.1.2/docxtools/man/density.Rd |only docxtools-0.1.2/docxtools/man/docxtools.Rd | 4 docxtools-0.1.2/docxtools/man/figures |only docxtools-0.1.2/docxtools/man/format_engr.Rd | 106 docxtools-0.1.2/docxtools/man/put_gap.Rd | 8 docxtools-0.1.2/docxtools/tests |only docxtools-0.1.2/docxtools/vignettes/introduction-to-docxtools.Rmd | 7 docxtools-0.1.2/docxtools/vignettes/numbers-in-engineering-format.Rmd | 261 +- docxtools-0.1.2/docxtools/vignettes/put-workspace-in-docx.Rmd | 145 - 33 files changed, 2355 insertions(+), 1388 deletions(-)
Title: Bayesian Multi-Plate High-Throughput Screening of Compounds
Description: Can be used for joint identification of candidate compound hits from multiple assays, in drug discovery. This package implements the framework of I. D. Shterev, D. B. Dunson, C. Chan and G. D. Sempowski. "Bayesian Multi-Plate High-Throughput Screening of Compounds", Scientific Reports (to appear). This project was funded by the Division of Allergy, Immunology, and Transplantation, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services, under contract No. HHSN272201400054C entitled "Adjuvant Discovery For Vaccines Against West Nile Virus and Influenza", awarded to Duke University and lead by Drs. Herman Staats and Soman Abraham.
Author: Ivo D. Shterev [aut, cre],
David B. Dunson [aut],
Cliburn Chan [aut],
Gregory D. Sempowski [aut]
Maintainer: Ivo D. Shterev <i.shterev@duke.edu>
Diff between BHTSpack versions 0.2 dated 2018-06-12 and 0.3 dated 2018-06-14
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- build/partial.rdb |binary inst/doc/BHTSpackManual.pdf |binary man/h.pr.u.Rd | 2 +- src/BHTSpack.cpp | 2 +- 6 files changed, 10 insertions(+), 10 deletions(-)
Title: Routines for Logspline Density Estimation
Description: Contains routines for logspline density estimation.
The function oldlogspline() uses the same algorithm as the logspline package
version 1.0.x; i.e. the Kooperberg and Stone (1992) <DOI:10.2307/1390786>
algorithm (with an improved interface). The recommended routine logspline()
uses an algorithm from Stone et al (1997) <DOI:10.1214/aos/1031594728>.
Author: Charles Kooperberg <clk@fredhutch.org>
Maintainer: Charles Kooperberg <clk@fredhutch.org>
Diff between logspline versions 2.1.10 dated 2018-06-02 and 2.1.11 dated 2018-06-14
DESCRIPTION | 8 +++--- MD5 | 10 +++---- R/logspline.R | 2 - man/logspline-internal.Rd | 4 +-- src/lsdall.c | 60 +++++++++++++++++++++++++++++++--------------- src/nlsd.c | 5 ++- 6 files changed, 56 insertions(+), 33 deletions(-)
Title: Regression Spline Functions and Classes
Description: Constructs B-splines and its integral, monotone splines
(M-splines) and its integral (I-splines), convex splines (C-splines),
and their derivatives of given order. Piecewise constant basis is
allowed for B-splines and M-splines. See
De Boor (1978) <doi:10.1002/zamm.19800600129>,
Ramsay (1988) <doi:10.1214/ss/1177012761>, and
Meyer (2008) <doi:10.1214/08-AOAS167> for more information.
Author: Wenjie Wang [aut, cre],
Jun Yan [aut]
Maintainer: Wenjie Wang <wenjie.2.wang@uconn.edu>
Diff between splines2 versions 0.2.7 dated 2017-12-01 and 0.2.8 dated 2018-06-14
DESCRIPTION | 8 - MD5 | 34 +++---- NEWS.md | 10 +- R/bSpline.R | 61 +++++++++---- R/cSpline.R | 2 R/dbs.R | 2 R/deriv.R | 2 R/iSpline.R | 2 R/ibs.R | 2 R/mSpline.R | 2 R/misc.R | 6 - R/predict.R | 2 R/print.R | 2 R/splines2-package.R | 2 build/vignette.rds |binary inst/CITATION | 8 - inst/doc/splines2-intro.html | 190 ++++++++++++++++++++++-------------------- tests/testthat/test-bSpline.R | 4 18 files changed, 193 insertions(+), 146 deletions(-)
Title: Multidimensional Scaling
Description: Implements the following approaches for multidimensional scaling (MDS) based on stress minimization using majorization (smacof): ratio/interval/ordinal/spline MDS on symmetric dissimilarity matrices, MDS with external constraints on the configuration, individual differences scaling (idioscal, indscal), MDS with spherical restrictions, and ratio/interval/ordinal/spline unfolding (circular restrictions, row-conditional). Various tools and extensions like jackknife MDS, bootstrap MDS, permutation tests, MDS biplots, gravity models, inverse MDS, unidimensional scaling, drift vectors (asymmetric MDS), classical scaling, and Procrustes are implemented as well.
Author: Patrick Mair [aut, cre],
Jan De Leeuw [aut],
Ingwer Borg [ctb],
Patrick J. F. Groenen [ctb]
Maintainer: Patrick Mair <mair@fas.harvard.edu>
Diff between smacof versions 1.10-5 dated 2018-03-20 and 1.10-8 dated 2018-06-14
smacof-1.10-5/smacof/build |only smacof-1.10-5/smacof/inst/doc |only smacof-1.10-5/smacof/vignettes |only smacof-1.10-8/smacof/DESCRIPTION | 18 +-- smacof-1.10-8/smacof/MD5 | 137 +++++++++++++-------------- smacof-1.10-8/smacof/NAMESPACE | 3 smacof-1.10-8/smacof/R/biplotmds.smacof.R | 3 smacof-1.10-8/smacof/R/bootmds.smacofB.R | 8 + smacof-1.10-8/smacof/R/driftVectors.R | 2 smacof-1.10-8/smacof/R/gravity.R | 19 ++- smacof-1.10-8/smacof/R/inverseMDS.R | 7 - smacof-1.10-8/smacof/R/plot.driftvec.R | 21 +++- smacof-1.10-8/smacof/R/plot.mdsbi.R | 1 smacof-1.10-8/smacof/R/plot.procr.R | 16 ++- smacof-1.10-8/smacof/R/plot.smacofR.R | 29 ----- smacof-1.10-8/smacof/R/print.imds.R |only smacof-1.10-8/smacof/R/print.smacofJK.R | 8 - smacof-1.10-8/smacof/R/print.smacofPerm.R | 2 smacof-1.10-8/smacof/R/print.smacofboot.R | 1 smacof-1.10-8/smacof/R/sim2diss.R | 66 +++++++++++-- smacof-1.10-8/smacof/R/smacofConstraint.R | 3 smacof-1.10-8/smacof/data/CanadaNews.rda |binary smacof-1.10-8/smacof/data/Duration.rda |binary smacof-1.10-8/smacof/data/DurationRaw.rda |binary smacof-1.10-8/smacof/data/EW_eng.rda |binary smacof-1.10-8/smacof/data/EW_ger.rda |binary smacof-1.10-8/smacof/data/FaceExp.rda |only smacof-1.10-8/smacof/data/FaceScale.rda |only smacof-1.10-8/smacof/data/GOPdtm.rda |binary smacof-1.10-8/smacof/data/Guerry.rda |binary smacof-1.10-8/smacof/data/KIPT.rda |binary smacof-1.10-8/smacof/data/Lawler.rda |binary smacof-1.10-8/smacof/data/OCP.rda |binary smacof-1.10-8/smacof/data/PVQ40.rda |binary smacof-1.10-8/smacof/data/PVQ40agg.rda |binary smacof-1.10-8/smacof/data/Plato7.rda |binary smacof-1.10-8/smacof/data/RockHard.rda |binary smacof-1.10-8/smacof/data/VaziriXu.rda |only smacof-1.10-8/smacof/data/bread.rda |binary smacof-1.10-8/smacof/data/breakfast.rda |binary smacof-1.10-8/smacof/data/crimes.rda |binary smacof-1.10-8/smacof/data/csrranking.rda |binary smacof-1.10-8/smacof/data/ekman.rda |binary smacof-1.10-8/smacof/data/helm.rda |binary smacof-1.10-8/smacof/data/indvalues.rda |binary smacof-1.10-8/smacof/data/intelligence.rda |binary smacof-1.10-8/smacof/data/kinshipdelta.rda |binary smacof-1.10-8/smacof/data/kinshipscales.rda |binary smacof-1.10-8/smacof/data/morse.rda |binary smacof-1.10-8/smacof/data/morse2.rda |binary smacof-1.10-8/smacof/data/morsescales.rda |binary smacof-1.10-8/smacof/data/partypref.rda |binary smacof-1.10-8/smacof/data/perception.rda |binary smacof-1.10-8/smacof/data/rect_constr.rda |binary smacof-1.10-8/smacof/data/rectangles.rda |binary smacof-1.10-8/smacof/data/stardist.rda |binary smacof-1.10-8/smacof/data/trading.rda |binary smacof-1.10-8/smacof/data/winedat.rda |binary smacof-1.10-8/smacof/data/wish.rda |binary smacof-1.10-8/smacof/inst/NEWS.Rd | 34 ++++++ smacof-1.10-8/smacof/man/FaceExp.Rd |only smacof-1.10-8/smacof/man/Procrustes.Rd | 21 ++-- smacof-1.10-8/smacof/man/VaziriXu.Rd |only smacof-1.10-8/smacof/man/bootmds.smacofB.Rd | 1 smacof-1.10-8/smacof/man/driftVectors.Rd | 17 ++- smacof-1.10-8/smacof/man/gravity.Rd | 4 smacof-1.10-8/smacof/man/inverseMDS.Rd | 31 +----- smacof-1.10-8/smacof/man/morse.Rd | 2 smacof-1.10-8/smacof/man/permtest.smacof.Rd | 14 +- smacof-1.10-8/smacof/man/sim2diss.Rd | 25 +++- smacof-1.10-8/smacof/man/smacofConstraint.rd | 72 +++++--------- smacof-1.10-8/smacof/man/symdecomp.Rd | 2 72 files changed, 335 insertions(+), 232 deletions(-)
Title: Structural Equation Multidimensional Scaling
Description: Fits a structural equation multidimensional scaling (SEMDS) model for asymmetric and three-way input dissimilarities. It assumes that the dissimilarities are measured with errors. The latent dissimilarities are estimated as factor scores within an SEM framework while the objects are represented in a low-dimensional space as in MDS.
Author: Patrick Mair [aut, cre],
Jose Fernando Vera [aut]
Maintainer: Patrick Mair <mair@fas.harvard.edu>
Diff between semds versions 0.9-3 dated 2018-05-26 and 0.9-4 dated 2018-06-14
DESCRIPTION | 11 ++- MD5 | 17 +++-- R/normDissN.R |only R/semds.R | 146 ++++++++++++++++++++++++++------------------------- data/AvaRegions.rda |binary data/BrahmsNorm.rda |binary data/Miller.rda |binary data/SBanks2008D.rda |binary data/SBanks2012D.rda |binary man/semds.Rd | 2 10 files changed, 92 insertions(+), 84 deletions(-)
Title: Model Agnostic Explainers for Individual Predictions
Description: Model agnostic tool for decomposition of predictions from black boxes.
Break Down Table shows contributions of every variable to a final prediction.
Break Down Plot presents variable contributions in a concise graphical way.
This package work for binary classifiers and general regression models.
Author: Przemyslaw Biecek [aut, cre],
Aleksandra Grudziaz [ctb]
Maintainer: Przemyslaw Biecek <przemyslaw.biecek@gmail.com>
Diff between breakDown versions 0.1.5 dated 2018-04-06 and 0.1.6 dated 2018-06-14
breakDown-0.1.5/breakDown/man/create.broken.Rd |only breakDown-0.1.6/breakDown/DESCRIPTION | 29 - breakDown-0.1.6/breakDown/MD5 | 47 +-- breakDown-0.1.6/breakDown/NEWS.md | 5 breakDown-0.1.6/breakDown/R/HR_data.R | 4 breakDown-0.1.6/breakDown/R/break.R | 190 ++---------- breakDown-0.1.6/breakDown/R/break_agnostic.R |only breakDown-0.1.6/breakDown/R/create.R | 14 breakDown-0.1.6/breakDown/R/plot.R | 197 ++++++++++--- breakDown-0.1.6/breakDown/build/vignette.rds |binary breakDown-0.1.6/breakDown/inst/doc/break_caret.html | 38 +- breakDown-0.1.6/breakDown/inst/doc/break_glm.html | 8 breakDown-0.1.6/breakDown/inst/doc/break_lm.html | 10 breakDown-0.1.6/breakDown/inst/doc/break_randomForest.html | 10 breakDown-0.1.6/breakDown/inst/doc/break_ranger.html | 8 breakDown-0.1.6/breakDown/inst/doc/break_svm.html | 8 breakDown-0.1.6/breakDown/inst/doc/break_xgboost.html | 27 - breakDown-0.1.6/breakDown/man/HR_data.Rd | 4 breakDown-0.1.6/breakDown/man/broken.Rd | 36 ++ breakDown-0.1.6/breakDown/man/broken.default.Rd | 30 + breakDown-0.1.6/breakDown/man/broken.glm.Rd | 4 breakDown-0.1.6/breakDown/man/broken.lm.Rd | 4 breakDown-0.1.6/breakDown/man/plot.broken.Rd | 50 ++- breakDown-0.1.6/breakDown/tests |only 24 files changed, 416 insertions(+), 307 deletions(-)
Title: Geometric Morphometrics Analyses
Description: Tools for geometric morphometric analysis. The package includes tools of virtual anthropology to align two not articulated parts belonging to the same specimen, to build virtual cavities as endocast (Profico et al, 2018 <doi:10.1002/ajpa.23493>), and functions to import and export the coordinates of landmarks and 3D paths into 'landmarkAscii' and 'am' format files.
Author: Antonio Profico, Alessio Veneziano, Marina Melchionna, Pasquale Raia
Maintainer: Antonio Profico <antonio.profico@uniroma1.it>
Diff between Arothron versions 1.0.0 dated 2018-04-03 and 1.0.1 dated 2018-06-14
DESCRIPTION | 16 +++---- MD5 | 18 ++++---- R/compare_check.set.R | 74 +++++++++++++++++----------------- R/dec.curve.R | 1 R/dta.R | 107 ++++++++++++++++++++++++-------------------------- R/out.inn.mesh.R | 6 -- data/SCP1.mesh.rda |binary data/krd1_tooth.rda |binary man/dec.curve.Rd | 1 man/out.inn.mesh.Rd | 4 - 10 files changed, 112 insertions(+), 115 deletions(-)
Title: Three-Mode Principal Components Analysis
Description: Performs Three-Mode Principal Components Analysis,
which carries out Tucker Models.
Author: Marta Marticorena [aut],
Gustavo Gimenez [cre],
Cecilia Gonzalez [ctb],
Sergio Bramardi [aut]
Maintainer: Gustavo Gimenez <gustavo.gimenez@faea.uncoma.edu.ar>
Diff between tuckerR.mmgg versions 1.5.0 dated 2017-02-23 and 1.5.1 dated 2018-06-14
DESCRIPTION | 8 ++++---- MD5 | 24 +++++++++++++----------- NAMESPACE | 2 +- NEWS.md |only R/plot.R | 4 ++-- R/tucker2R.R | 10 +++++----- README.md | 23 +++++++++++++++++++---- man/diffit.Rd | 7 +++---- man/maize_pop.Rd | 1 - man/matrition.Rd | 1 - man/plot.Rd | 8 ++++---- man/tucker2R.Rd | 17 ++++++++--------- man/tuckerR.mmgg.Rd | 1 - tools |only 14 files changed, 59 insertions(+), 47 deletions(-)
Title: Design Menu for Radiant: Business Analytics using R and Shiny
Description: The Radiant Design menu includes interfaces for design of
experiments, sampling, and sample size calculation. The application extends
the functionality in radiant.data.
Author: Vincent Nijs [aut, cre]
Maintainer: Vincent Nijs <radiant@rady.ucsd.edu>
Diff between radiant.design versions 0.8.0 dated 2017-04-27 and 0.9.5 dated 2018-06-14
DESCRIPTION | 18 - MD5 | 82 +++-- NAMESPACE | 6 NEWS.md | 41 ++ R/aaa.R | 4 R/doe.R | 177 +++++++----- R/radiant.R | 40 ++ R/sample_size.R | 117 ++++---- R/sample_size_comp.R | 144 +++++----- R/sampling.R | 59 ++-- README.md | 70 +++-- inst/app/global.R | 7 inst/app/help.R | 22 + inst/app/init.R | 33 +- inst/app/server.R | 32 +- inst/app/tools/analysis/doe_ui.R | 294 ++++++++++++++------- inst/app/tools/analysis/sample_size_comp_ui.R | 108 ++++--- inst/app/tools/analysis/sample_size_ui.R | 122 +++++--- inst/app/tools/analysis/sampling_ui.R | 94 +++--- inst/app/tools/help/doe.md | 18 - inst/app/tools/help/figures/doe_factors.png |binary inst/app/tools/help/figures/doe_output.png |binary inst/app/tools/help/figures/doe_output_partial.png |binary inst/app/tools/help/figures/sampling.png |binary inst/app/tools/help/sample_size.Rmd | 24 + inst/app/tools/help/sample_size.md | 24 + inst/app/tools/help/sample_size_comp.Rmd | 8 inst/app/tools/help/sample_size_comp.md | 8 inst/app/tools/help/sampling.md | 14 - inst/app/ui.R | 14 - inst/app/www/js/run_return.js | 27 - man/doe.Rd | 8 man/radiant.design.Rd | 7 man/radiant.design_viewer.Rd |only man/radiant.design_window.Rd |only man/sample_size.Rd | 4 man/sample_size_comp.Rd | 7 man/sampling.Rd | 6 man/summary.doe.Rd | 9 man/summary.sample_size.Rd | 4 man/summary.sample_size_comp.Rd | 7 man/summary.sampling.Rd | 9 tests/testthat/test_stats.R | 6 43 files changed, 1021 insertions(+), 653 deletions(-)
More information about radiant.design at CRAN
Permanent link
Title: R Interface to 'TensorFlow'
Description: Interface to 'TensorFlow' <https://www.tensorflow.org/>,
an open source software library for numerical computation using data
flow graphs. Nodes in the graph represent mathematical operations,
while the graph edges represent the multidimensional data arrays
(tensors) communicated between them. The flexible architecture allows
you to deploy computation to one or more 'CPUs' or 'GPUs' in a desktop,
server, or mobile device with a single 'API'. 'TensorFlow' was originally
developed by researchers and engineers working on the Google Brain Team
within Google's Machine Intelligence research organization for the
purposes of conducting machine learning and deep neural networks research,
but the system is general enough to be applicable in a wide variety
of other domains as well.
Author: JJ Allaire [aut, cre],
RStudio [cph, fnd],
Yuan Tang [aut, cph] (<https://orcid.org/0000-0001-5243-233X>),
Dirk Eddelbuettel [ctb, cph],
Nick Golding [ctb, cph],
Tomasz Kalinowski [ctb, cph],
Google Inc. [ctb, cph] (Examples and Tutorials)
Maintainer: JJ Allaire <jj@rstudio.com>
Diff between tensorflow versions 1.5 dated 2018-01-17 and 1.8 dated 2018-06-14
tensorflow-1.5/tensorflow/R/extraction.R |only tensorflow-1.8/tensorflow/DESCRIPTION | 16 tensorflow-1.8/tensorflow/MD5 | 21 tensorflow-1.8/tensorflow/NAMESPACE | 2 tensorflow-1.8/tensorflow/R/eager.R | 24 tensorflow-1.8/tensorflow/R/extract.R |only tensorflow-1.8/tensorflow/R/generics.R | 16 tensorflow-1.8/tensorflow/R/install.R | 24 tensorflow-1.8/tensorflow/R/save.R | 3 tensorflow-1.8/tensorflow/man/all_dims.Rd |only tensorflow-1.8/tensorflow/man/install_tensorflow.Rd | 8 tensorflow-1.8/tensorflow/man/sub-.tensorflow.tensor.Rd |only tensorflow-1.8/tensorflow/man/tf_extract_opts.Rd |only tensorflow-1.8/tensorflow/tests/testthat/test-extract-syntax.R | 306 ++++++++-- 14 files changed, 306 insertions(+), 114 deletions(-)
Title: Tools for Combinatorics and Computational Mathematics
Description: Provides optimized functions implemented in C++ with 'Rcpp'
for solving problems in combinatorics and computational mathematics.
There are combination/permutations function that are both flexible as
well as efficient with respect to speed and memory. There are optional
constraint parameters that when utilized, generate all combinations/
permutations of a vector meeting specific criteria (e.g. finding all
combinations such that the sum is less than a bound). These functions
are capable of generating specific combinations/permutations (e.g.
retrieve only the 50th lexicographical permutation of 5 elements
choose 3) by utilizing the bounds arguments. This sets up nicely for
parallelization and allows for fast generation of combinations/
permutations beyond 2^31 - 1 results as chunks are generated
independently. All combinatorial functions are capable of handling
multisets as well. Additionally, there are several highly efficient
number theoretic functions that are useful for problems common in
computational mathematics. These include various sieving functions
that can quickly generate the following: prime numbers, number of
coprime elements, number of divisors, prime factorizations, and
complete factorizations. Some of these functions make use of the fast
integer division library 'libdivide' by <http://ridiculousfish.com>.
The primeSieve function is based on the segmented sieve of Eratosthenes
implementation by Kim Walisch. It is capable of generating all primes
less than a billion in just over 1 second. It can also quickly generate
prime numbers over a range (e.g. primeSieve(10^13, 10^13+10^9)). There
are stand-alone vectorized functions for general factoring (e.g. all
divisors of number), primality testing, as well as prime factoring via
Pollard's rho algorithm. Finally, there is a prime counting function
that implements a simple variation of Legendre's formula based on the
algorithm by Kim Walisch. It is capable of returning the number of
primes below a trillion in under 0.5 seconds.
Author: Joseph Wood
Maintainer: Joseph Wood <jwood000@gmail.com>
Diff between RcppAlgos versions 2.0.1 dated 2018-06-10 and 2.0.2 dated 2018-06-14
RcppAlgos-2.0.1/RcppAlgos/inst/include/PollardRho.h |only RcppAlgos-2.0.2/RcppAlgos/DESCRIPTION | 6 - RcppAlgos-2.0.2/RcppAlgos/MD5 | 26 ++-- RcppAlgos-2.0.2/RcppAlgos/NEWS | 6 - RcppAlgos-2.0.2/RcppAlgos/README.md | 63 +++++------- RcppAlgos-2.0.2/RcppAlgos/inst/include/ConstraintsUtils.h | 3 RcppAlgos-2.0.2/RcppAlgos/inst/include/GetFacsUtils.h |only RcppAlgos-2.0.2/RcppAlgos/inst/include/PhiTinyLookup.h | 7 - RcppAlgos-2.0.2/RcppAlgos/inst/include/PrimesPolRho.h | 15 +- RcppAlgos-2.0.2/RcppAlgos/inst/include/PrimesSegSieve.h | 13 +- RcppAlgos-2.0.2/RcppAlgos/src/Combinatorics.cpp | 3 RcppAlgos-2.0.2/RcppAlgos/src/DivisorsContainer.cpp | 2 RcppAlgos-2.0.2/RcppAlgos/src/PollardRho.cpp | 4 RcppAlgos-2.0.2/RcppAlgos/src/PrimesContainer.cpp | 9 - RcppAlgos-2.0.2/RcppAlgos/tests/testthat/testDivisorsRcpp.R | 12 +- 15 files changed, 92 insertions(+), 77 deletions(-)
Title: Create Japanese Administration Area and Office Maps
Description: Utilizing the data that Japanese administration area provided
by the National Land Numerical Information download service (<http://nlftp.mlit.go.jp/ksj/index.html>).
This package provide map data is based on the Digital Map 25000 (Map Image) published
by Geospatial Information Authority of Japan (Approval No.603FY2017 information usage <http://www.gsi.go.jp>).
Author: Shinya Uryu [aut, cre] (<https://orcid.org/0000-0002-0493-6186>),
Geospatial Information Authority of Japan [dtc] (This package data
sets, National Land numerical information by the Geographical
Survey Institute with the approval of Geographical Survey Institute
Head (Approval No.603FY2017 information usage))
Maintainer: Shinya Uryu <suika1127@gmail.com>
Diff between jpndistrict versions 0.3.1 dated 2018-05-01 and 0.3.2 dated 2018-06-14
jpndistrict-0.3.1/jpndistrict/man/pref_code.Rd |only jpndistrict-0.3.2/jpndistrict/DESCRIPTION | 10 jpndistrict-0.3.2/jpndistrict/MD5 | 138 +++++----- jpndistrict-0.3.2/jpndistrict/NAMESPACE | 1 jpndistrict-0.3.2/jpndistrict/NEWS.md | 12 jpndistrict-0.3.2/jpndistrict/R/district_viewer.R | 11 jpndistrict-0.3.2/jpndistrict/R/export_mesh.R | 58 +++- jpndistrict-0.3.2/jpndistrict/R/find_city.R | 73 +++-- jpndistrict-0.3.2/jpndistrict/R/spdf_jpn.R | 22 + jpndistrict-0.3.2/jpndistrict/R/sysdata.rda |binary jpndistrict-0.3.2/jpndistrict/R/util.R | 42 ++- jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_01.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_02.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_03.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_04.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_05.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_06.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_07.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_08.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_09.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_10.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_11.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_12.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_13.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_14.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_15.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_16.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_17.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_18.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_19.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_20.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_21.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_22.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_23.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_24.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_25.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_26.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_27.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_28.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_29.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_30.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_31.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_32.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_33.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_34.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_35.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_36.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_37.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_38.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_39.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_40.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_41.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_42.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_43.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_44.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_45.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_46.rds |binary jpndistrict-0.3.2/jpndistrict/inst/extdata/ksj_n03/pref_47.rds |binary jpndistrict-0.3.2/jpndistrict/man/admins_code_validate.Rd |only jpndistrict-0.3.2/jpndistrict/man/district_viewer.Rd | 4 jpndistrict-0.3.2/jpndistrict/man/find_city.Rd | 8 jpndistrict-0.3.2/jpndistrict/man/find_pref.Rd | 8 jpndistrict-0.3.2/jpndistrict/man/find_prefs.Rd | 8 jpndistrict-0.3.2/jpndistrict/man/jpn_admins.Rd | 3 jpndistrict-0.3.2/jpndistrict/man/jpn_cities.Rd | 7 jpndistrict-0.3.2/jpndistrict/man/jpn_pref.Rd | 14 - jpndistrict-0.3.2/jpndistrict/man/mesh_district.Rd | 4 jpndistrict-0.3.2/jpndistrict/tests/testthat/test-export.R | 9 jpndistrict-0.3.2/jpndistrict/tests/testthat/test-find_city.R | 13 jpndistrict-0.3.2/jpndistrict/tests/testthat/test-spdf_jpn.R | 14 + jpndistrict-0.3.2/jpndistrict/tests/testthat/test-util.R | 44 ++- 71 files changed, 352 insertions(+), 151 deletions(-)
Title: Powell Miscellaneous Functions for Teaching and Learning
Statistics
Description: Miscellaneous functions useful for teaching statistics as well as actually practicing the art. They typically are not “new” methods but rather wrappers around either base R or other packages. Currently contains: 'Plot2WayANOVA' which as the name implies conducts a 2 way ANOVA and plots the results using 'ggplot2'. 'neweta' which is a helper function that appends the results of a Type II eta squared calculation onto a classic ANOVA table. Mode which finds the modal value in a vector of data. 'SeeDist' which wraps around 'ggplot2' to provide visualizations of univariate data.
Author: Chuck Powell [aut, cre]
Maintainer: Chuck Powell <ibecav@gmail.com>
Diff between CGPfunctions versions 0.3 dated 2018-04-19 and 0.4 dated 2018-06-14
DESCRIPTION | 10 +++--- MD5 | 32 ++++++++++++++-------- NAMESPACE | 3 ++ NEWS.md | 17 ++++++++--- R/PlotXTabs.R | 11 +++++-- R/data.R |only R/newggslopegraph.R |only build/vignette.rds |binary data |only inst/doc/Using-Plot2WayANOVA.Rmd | 2 - inst/doc/Using-Plot2WayANOVA.html | 24 ++++++++-------- inst/doc/Using-PlotXTabs.Rmd | 2 - inst/doc/Using-PlotXTabs.html | 52 ++++++++++++++++++------------------ inst/doc/Using-newggslopegraph.R |only inst/doc/Using-newggslopegraph.Rmd |only inst/doc/Using-newggslopegraph.html |only man/newcancer.Rd |only man/newggslopegraph.Rd |only vignettes/Using-Plot2WayANOVA.Rmd | 2 - vignettes/Using-PlotXTabs.Rmd | 2 - vignettes/Using-newggslopegraph.Rmd |only 21 files changed, 91 insertions(+), 66 deletions(-)
Title: Terminal Progress Bars
Description: Configurable Progress bars, they may include percentage,
elapsed time, and/or the estimated completion time. They work in
terminals, in 'Emacs' 'ESS', 'RStudio', 'Windows' 'Rgui' and the
'macOS' 'R.app'. The package also provides a 'C++' 'API', that works
with or without 'Rcpp'.
Author: Gábor Csárdi [aut, cre], Rich FitzJohn [aut]
Maintainer: Gábor Csárdi <csardi.gabor@gmail.com>
Diff between progress versions 1.1.2 dated 2016-12-14 and 1.2.0 dated 2018-06-14
progress-1.1.2/progress/inst/README.metacran |only progress-1.1.2/progress/inst/progresstest |only progress-1.2.0/progress/DESCRIPTION | 16 progress-1.2.0/progress/LICENSE | 4 progress-1.2.0/progress/MD5 | 41 + progress-1.2.0/progress/NAMESPACE | 3 progress-1.2.0/progress/R/progress.R | 208 +++++++--- progress-1.2.0/progress/R/utils.R | 42 +- progress-1.2.0/progress/inst/NEWS.md | 37 + progress-1.2.0/progress/inst/README.markdown |only progress-1.2.0/progress/inst/include/RProgress.h | 47 +- progress-1.2.0/progress/man/progress_bar.Rd | 56 +- progress-1.2.0/progress/tests/testthat/helper.R | 44 -- progress-1.2.0/progress/tests/testthat/progresstest |only progress-1.2.0/progress/tests/testthat/progresstest_1.0.0.tar.gz |only progress-1.2.0/progress/tests/testthat/test-cpp.R | 49 -- progress-1.2.0/progress/tests/testthat/test-progress.R | 170 ++++---- 17 files changed, 451 insertions(+), 266 deletions(-)
Title: Light Use Efficiency Model to Estimate Biomass and YIELD with
and Without Vapour Pressure Deficit
Description: Contains LUE_BIOMASS(),LUE_BIOMASS_VPD(), LUE_YIELD() and LUE_YIELD_VPD() to estimate aboveground biomass and crop yield firstly by calculating the Absorbed Photosynthetically Active Radiation (APAR) and secondly the actual values of light use efficiency with and without vapour presure deficit Shi et al.(2007) <doi:10.2134/agronj2006.0260>.
Author: Maninder Singh Dhillon [aut,cre], Thorsten Dahms [ctb], Leon Nill [ctb]
Maintainer: Maninder Singh Dhillon <manidhillon1989@gmail.com>
Diff between lue versions 0.2.0 dated 2018-05-14 and 0.2.1 dated 2018-06-14
DESCRIPTION | 7 +++---- MD5 | 10 +++++----- R/LUE_BIOMASS.r | 4 ++-- R/LUE_BIOMASS_VPD.r | 10 ++++++---- R/LUE_YIELD.r | 4 ++-- R/LUE_YIELD_VPD.r | 11 ++++++----- 6 files changed, 24 insertions(+), 22 deletions(-)
Title: Compositional Data Analysis
Description: Provides functions for the consistent analysis of compositional
data (e.g. portions of substances) and positive numbers (e.g. concentrations)
in the way proposed by J. Aitchison and V. Pawlowsky-Glahn.
Author: K. Gerald van den Boogaart <boogaart@hzdr.de>,
Raimon Tolosana-Delgado, Matevz Bren
Maintainer: K. Gerald van den Boogaart <support@boogaart.de>
Diff between compositions versions 1.40-1 dated 2014-06-07 and 1.40-2 dated 2018-06-14
compositions-1.40-1/compositions/vignettes/UsingCompositions.tex |only compositions-1.40-2/compositions/DESCRIPTION | 18 - compositions-1.40-2/compositions/MD5 | 71 +++--- compositions-1.40-2/compositions/NAMESPACE | 67 ++++- compositions-1.40-2/compositions/R/3d.R | 103 ++++---- compositions-1.40-2/compositions/R/FunctionOutliers.R | 24 +- compositions-1.40-2/compositions/R/Geostat.R | 39 ++- compositions-1.40-2/compositions/R/binary.R | 4 compositions-1.40-2/compositions/R/compositions.R | 117 +++++----- compositions-1.40-2/compositions/R/ctests.R | 28 +- compositions-1.40-2/compositions/R/mix2comp.R | 2 compositions-1.40-2/compositions/R/tricks.R |only compositions-1.40-2/compositions/R/zerotreatment.R | 20 - compositions-1.40-2/compositions/build |only compositions-1.40-2/compositions/inst/doc/UsingCompositions.pdf |binary compositions-1.40-2/compositions/inst/doc/UsingCompositions.rnw |only compositions-1.40-2/compositions/inst/doc/index.html | 39 ++- compositions-1.40-2/compositions/man/CompLinModCo.Rd | 2 compositions-1.40-2/compositions/man/arrows3d.Rd | 3 compositions-1.40-2/compositions/man/biplot3d.Rd | 3 compositions-1.40-2/compositions/man/cdt.Rd | 2 compositions-1.40-2/compositions/man/coloredbiplot.Rd | 39 +-- compositions-1.40-2/compositions/man/compmiss.Rd | 2 compositions-1.40-2/compositions/man/compositions.Rd | 14 - compositions-1.40-2/compositions/man/endmemberCoordinates.Rd | 2 compositions-1.40-2/compositions/man/gsiPrinBal.Rd | 2 compositions-1.40-2/compositions/man/kingtetrahedron.Rd | 6 compositions-1.40-2/compositions/man/missingProjector.Rd | 2 compositions-1.40-2/compositions/man/plot3d.Rd | 2 compositions-1.40-2/compositions/man/plot3dacomp.Rd | 4 compositions-1.40-2/compositions/man/plot3daplus.Rd | 3 compositions-1.40-2/compositions/man/plot3drmult.Rd | 2 compositions-1.40-2/compositions/man/plot3drplus.Rd | 2 compositions-1.40-2/compositions/man/sumprojector.Rd | 2 compositions-1.40-2/compositions/man/variograms.Rd | 3 compositions-1.40-2/compositions/src/compositions.c | 91 +++++++ compositions-1.40-2/compositions/tests/CheckGeometry.Rout |only compositions-1.40-2/compositions/tests/RobustTest.Rout |only compositions-1.40-2/compositions/tests/TestMissing.Rout |only compositions-1.40-2/compositions/vignettes/UsingCompositions.rnw |only 40 files changed, 457 insertions(+), 261 deletions(-)
Title: Minimization Tool for Pharmacokinetic-Pharmacodynamic Data
Analysis
Description: This is a set of minimization tools (maximum likelihood estimation and least square fitting) to solve examples in the Johan Gabrielsson and Dan Weiner's book "Pharmacokinetic and Pharmacodynamic Data Analysis - Concepts and Applications" 5th ed. (ISBN:9198299107). Examples include linear and nonlinear compartmental model, turn-over model, single or multiple dosing bolus/infusion/oral models, allometry, toxicokinetics, reversible metabolism, in-vitro/in-vivo extrapolation, enterohepatic circulation, metabolite modeling, Emax model, inhibitory model, tolerance model, oscillating response model, enantiomer interaction model, effect compartment model, drug-drug interaction model, receptor occupancy model, and rebound phenomena model.
Author: Kyun-Seop Bae [aut]
Maintainer: Kyun-Seop Bae <k@acr.kr>
Diff between wnl versions 0.4.0 dated 2018-04-02 and 0.4.1 dated 2018-06-14
DESCRIPTION | 6 +++--- MD5 | 16 ++++++++-------- inst/NEWS.Rd | 6 ++++++ inst/doc/wnl-manual.pdf |binary man/Secondary.Rd | 4 ++-- man/dx.Rd | 4 ++-- man/nlr.Rd | 14 +++++++------- man/wnl-package.Rd | 2 +- man/wnl5.Rd | 12 ++++++------ 9 files changed, 35 insertions(+), 29 deletions(-)
Title: Linguistic Typology and Mapping
Description: Provides R with the Glottolog database <http://glottolog.org> and some more abilities for purposes of linguistic mapping. The Glottolog database contains the catalogue of languages of the world. This package helps researchers to make a linguistic maps, using philosophy of the Cross-Linguistic Linked Data project <http://clld.org/>, which allows for while at the same time facilitating uniform access to the data across publications. A tutorial for this package is available on GitHub pages <https://ropensci.github.io/lingtypology/> and package vignette. Maps created by this package can be used both for the investigation and linguistic teaching. In addition, package provides an ability to download data from typological databases such as WALS, AUTOTYP and some others and to create your own database website.
Author: George Moroz
Maintainer: George Moroz <agricolamz@gmail.com>
Diff between lingtypology versions 1.0.12 dated 2018-03-10 and 1.0.13 dated 2018-06-14
lingtypology-1.0.12/lingtypology/R/polygon.points.R |only lingtypology-1.0.12/lingtypology/man/polygon.points.Rd |only lingtypology-1.0.13/lingtypology/DESCRIPTION | 10 lingtypology-1.0.13/lingtypology/MD5 | 92 ++- lingtypology-1.0.13/lingtypology/NAMESPACE | 6 lingtypology-1.0.13/lingtypology/NEWS | 23 lingtypology-1.0.13/lingtypology/R/abvd.feature.R | 2 lingtypology-1.0.13/lingtypology/R/afbo.feature.R | 2 lingtypology-1.0.13/lingtypology/R/autotyp.feature.R | 2 lingtypology-1.0.13/lingtypology/R/circassian.R | 4 lingtypology-1.0.13/lingtypology/R/map.feature.R | 242 ++++++++-- lingtypology-1.0.13/lingtypology/R/oto_mangueanIC.R |only lingtypology-1.0.13/lingtypology/R/oto_mangueanIC.feature.R |only lingtypology-1.0.13/lingtypology/R/phoible.feature.R | 2 lingtypology-1.0.13/lingtypology/R/polygon.points_fd.R |only lingtypology-1.0.13/lingtypology/R/polygon.points_kde.R |only lingtypology-1.0.13/lingtypology/R/providers.R |only lingtypology-1.0.13/lingtypology/R/sails.feature.R | 2 lingtypology-1.0.13/lingtypology/R/url.lang.R | 1 lingtypology-1.0.13/lingtypology/R/valpal.feature.R |only lingtypology-1.0.13/lingtypology/R/wals.feature.R | 2 lingtypology-1.0.13/lingtypology/build/vignette.rds |binary lingtypology-1.0.13/lingtypology/data/circassian.RData |binary lingtypology-1.0.13/lingtypology/data/datalist | 2 lingtypology-1.0.13/lingtypology/data/ejective_and_n_consonants.RData |binary lingtypology-1.0.13/lingtypology/data/oto_mangueanIC.RData |only lingtypology-1.0.13/lingtypology/data/providers.rda |only lingtypology-1.0.13/lingtypology/inst/CITATION | 2 lingtypology-1.0.13/lingtypology/inst/doc/lingtypology_creating_maps.R | 25 - lingtypology-1.0.13/lingtypology/inst/doc/lingtypology_creating_maps.Rmd | 35 - lingtypology-1.0.13/lingtypology/inst/doc/lingtypology_creating_maps.html | 37 - lingtypology-1.0.13/lingtypology/inst/doc/lingtypology_db_API.html | 4 lingtypology-1.0.13/lingtypology/inst/doc/lingtypology_dplyr.R | 43 + lingtypology-1.0.13/lingtypology/inst/doc/lingtypology_dplyr.Rmd | 84 +++ lingtypology-1.0.13/lingtypology/inst/doc/lingtypology_dplyr.html | 62 ++ lingtypology-1.0.13/lingtypology/inst/doc/lingtypology_glottolog_functions.html | 4 lingtypology-1.0.13/lingtypology/inst/doc/lingtypology_intro.html | 8 lingtypology-1.0.13/lingtypology/inst/doc/manual/lingtypology.pdf |binary lingtypology-1.0.13/lingtypology/man/abvd.feature.Rd | 2 lingtypology-1.0.13/lingtypology/man/afbo.feature.Rd | 2 lingtypology-1.0.13/lingtypology/man/autotyp.feature.Rd | 2 lingtypology-1.0.13/lingtypology/man/circassian.Rd | 4 lingtypology-1.0.13/lingtypology/man/map.feature.Rd | 71 +- lingtypology-1.0.13/lingtypology/man/oto_mangueanIC.Rd |only lingtypology-1.0.13/lingtypology/man/oto_mangueanIC.feature.Rd |only lingtypology-1.0.13/lingtypology/man/phoible.feature.Rd | 2 lingtypology-1.0.13/lingtypology/man/polygon.points_fd.Rd |only lingtypology-1.0.13/lingtypology/man/polygon.points_kde.Rd |only lingtypology-1.0.13/lingtypology/man/providers.Rd |only lingtypology-1.0.13/lingtypology/man/sails.feature.Rd | 2 lingtypology-1.0.13/lingtypology/man/valpal.feature.Rd |only lingtypology-1.0.13/lingtypology/man/wals.feature.Rd | 2 lingtypology-1.0.13/lingtypology/tests/testthat/test-mapfeature.R | 20 lingtypology-1.0.13/lingtypology/vignettes/lingtypology_creating_maps.Rmd | 35 - lingtypology-1.0.13/lingtypology/vignettes/lingtypology_dplyr.Rmd | 84 +++ 55 files changed, 703 insertions(+), 219 deletions(-)
Title: Modelling and Analysis of Real-Time PCR Data
Description: Model fitting, optimal model selection and calculation of various features that are essential in the analysis of quantitative real-time polymerase chain reaction (qPCR).
Author: Andrej-Nikolai Spiess <a.spiess@uke.uni-hamburg.de>
Maintainer: Andrej-Nikolai Spiess <a.spiess@uke.uni-hamburg.de>
Diff between qpcR versions 1.4-0 dated 2014-09-15 and 1.4-1 dated 2018-06-14
DESCRIPTION | 11 ++++--- MD5 | 51 ++++++++++++++++++----------------- NAMESPACE | 19 ++++++++++++- NEWS | 5 +++ R/PRESS.R | 2 - R/calib.r | 4 +- R/efficiency.R | 7 +--- R/getPar.r | 2 - R/maxRatio.r | 2 - R/pcrGOF.R | 2 - R/pcrboot.r | 2 - R/pcrsim.r | 2 - R/plot.pcrfit.r | 61 ++++++++++++++--------------------------- R/propagate.R | 2 - R/utils.R | 6 ++-- man/LRE.Rd | 11 ++----- man/calib.rd | 8 ++--- man/eff.Rd | 2 - man/getPar.rd | 6 ---- man/pcrsim.rd | 4 +- man/plot.pcrfit.Rd | 64 ++++++++++++++------------------------------ man/propagate.Rd | 2 - man/qpcR_datasets.rd | 2 - man/refmean.Rd | 2 - src/Makevars |only src/Makevars.win |only src/registerDynamicSymbol.c |only src/smth.c | 16 +++++------ 28 files changed, 133 insertions(+), 162 deletions(-)
Title: Network Visualization using 'vis.js' Library
Description: Provides an R interface to the 'vis.js' JavaScript charting
library. It allows an interactive visualization of networks.
Author: Almende B.V. [aut, cph] (vis.js library in htmlwidgets/lib,
http://visjs.org, http://www.almende.com/home),
Benoit Thieurmel [aut, cre] (R interface),
Titouan Robert [aut, ctb]
Maintainer: Benoit Thieurmel <benoit.thieurmel@datastorm.fr>
Diff between visNetwork versions 2.0.3 dated 2018-01-09 and 2.0.4 dated 2018-06-14
visNetwork-2.0.3/visNetwork/inst/htmlwidgets/lib/font-awesome/HELP-US-OUT.txt |only visNetwork-2.0.4/visNetwork/DESCRIPTION | 8 visNetwork-2.0.4/visNetwork/MD5 | 110 visNetwork-2.0.4/visNetwork/NAMESPACE | 1 visNetwork-2.0.4/visNetwork/NEWS | 7 visNetwork-2.0.4/visNetwork/R/dependencies.R | 7 visNetwork-2.0.4/visNetwork/R/visHclust.R | 207 visNetwork-2.0.4/visNetwork/R/visNearestNodes.R | 2 visNetwork-2.0.4/visNetwork/R/visOptions.R | 24 visNetwork-2.0.4/visNetwork/R/visTree.R | 319 visNetwork-2.0.4/visNetwork/R/visTreeModule.R | 489 - visNetwork-2.0.4/visNetwork/README.md | 10 visNetwork-2.0.4/visNetwork/inst/doc/Introduction-to-visNetwork.html | 194 visNetwork-2.0.4/visNetwork/inst/fontAwesome |only visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/css/font-awesome.css |only visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/css/font-awesome.css.map |only visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/css/font-awesome.min.css | 8 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/fonts/FontAwesome.otf |binary visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/fonts/fontawesome-webfont.eot |binary visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/fonts/fontawesome-webfont.svg | 3326 ++++++++-- visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/fonts/fontawesome-webfont.ttf |binary visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/fonts/fontawesome-webfont.woff |binary visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/fonts/fontawesome-webfont.woff2 |binary visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/less/animated.less | 68 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/less/bordered-pulled.less | 50 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/less/core.less | 24 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/less/fixed-width.less | 12 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/less/font-awesome.less | 35 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/less/icons.less | 1486 ++-- visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/less/larger.less | 26 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/less/list.less | 38 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/less/mixins.less | 86 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/less/path.less | 30 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/less/rotated-flipped.less | 40 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/less/screen-reader.less |only visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/less/stacked.less | 40 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/less/variables.less | 1508 ++-- visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/scss/_animated.scss | 68 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/scss/_bordered-pulled.scss | 50 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/scss/_core.scss | 24 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/scss/_fixed-width.scss | 12 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/scss/_icons.scss | 1486 ++-- visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/scss/_larger.scss | 26 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/scss/_list.scss | 38 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/scss/_mixins.scss | 86 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/scss/_path.scss | 30 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/scss/_rotated-flipped.scss | 40 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/scss/_screen-reader.scss |only visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/scss/_stacked.scss | 40 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/scss/_variables.scss | 1508 ++-- visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/font-awesome/scss/font-awesome.scss | 35 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/lib/vis/vis.css | 16 visNetwork-2.0.4/visNetwork/inst/htmlwidgets/visNetwork.js | 51 visNetwork-2.0.4/visNetwork/man/addFontAwesome.Rd | 5 visNetwork-2.0.4/visNetwork/man/visHclust.Rd | 91 visNetwork-2.0.4/visNetwork/man/visNetwork-treeModule.Rd | 29 visNetwork-2.0.4/visNetwork/man/visOptions.Rd | 2 visNetwork-2.0.4/visNetwork/man/visTree.Rd | 53 visNetwork-2.0.4/visNetwork/man/visTreeEditor.Rd | 4 59 files changed, 7344 insertions(+), 4505 deletions(-)
Title: Multivariate Normality Tests
Description: Performs multivariate normality tests and graphical approaches and
implements multivariate outlier detection and univariate normality of marginal
distributions through plots and tests (Korkmaz et al, (2014), <https://journal.r-project.org/archive/2014-2/korkmaz-goksuluk-zararsiz.pdf>).
Author: Selcuk Korkmaz [aut, cre],
Dincer Goksuluk [aut],
Gokmen Zararsiz [aut]
Maintainer: Selcuk Korkmaz <selcukorkmaz@gmail.com>
Diff between MVN versions 5.4 dated 2018-06-09 and 5.5 dated 2018-06-14
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- R/mvn.R | 2 +- inst/doc/MVN.Rnw | 2 +- inst/doc/MVN.pdf |binary vignettes/MVN.Rnw | 2 +- 6 files changed, 12 insertions(+), 12 deletions(-)
Title: Methods for Measuring Functional Diversity Based on Trait
Probability Density
Description: Tools to calculate trait probability density functions (TPD) at
any scale (e.g. populations, species, communities). TPD functions are used to compute
several indices of functional diversity, as well as its partition across scales.
These indices constitute a unified framework that incorporates the underlying
probabilistic nature of trait distributions into uni- or multidimensional
functional trait-based studies. See Carmona et al. (2016) <doi:10.1016/j.tree.2016.02.003> for
further information.
Author: Carlos P. Carmona <perezcarmonacarlos@gmail.com>
Maintainer: Carlos P. Carmona <perezcarmonacarlos@gmail.com>
Diff between TPD versions 0.1.2 dated 2017-11-09 and 1.0.0 dated 2018-06-14
DESCRIPTION | 8 MD5 | 64 +- NAMESPACE | 32 - R/REND.R | 412 +++++++------- R/Rao.R | 362 ++++++------ R/TPDc.R | 229 ++++---- R/TPDs.R | 406 +++++++------- R/TPDsMean.R | 548 +++++++++---------- R/dissim.R | 211 +++---- R/plotTPD.R | 375 ++++++------- R/tSamp.R | 144 ++--- R/uniqueness.R | 116 ++-- build/vignette.rds |binary inst/doc/TPD.R | 534 +++++++++---------- inst/doc/TPD.Rmd | 1068 +++++++++++++++++++------------------- inst/doc/TPD.html | 1455 +++++++++++++++++++++++++++++++--------------------- man/REND.Rd | 140 ++--- man/Rao.Rd | 90 +-- man/TPD.Rd | 26 man/TPDc.Rd | 74 +- man/TPDs.Rd | 97 +-- man/TPDsMean.Rd | 216 +++---- man/dissim.Rd | 71 +- man/plotTPD.Rd | 150 ++--- man/redundancy.Rd | 72 +- man/tSamp.Rd | 77 +- man/uniqueness.Rd | 73 +- vignettes/TPD.Rmd | 1068 +++++++++++++++++++------------------- vignettes/TPD_files |only 29 files changed, 4217 insertions(+), 3901 deletions(-)
Title: MCMC, Particle Filtering, and Programmable Hierarchical Modeling
Description: A system for writing hierarchical statistical models largely compatible with 'BUGS' and 'JAGS', writing nimbleFunctions to operate models and do basic R-style math, and compiling both models and nimbleFunctions via custom-generated C++. 'NIMBLE' includes default methods for MCMC, particle filtering, Monte Carlo Expectation Maximization, and some other tools. The nimbleFunction system makes it easy to do things like implement new MCMC samplers from R, customize the assignment of samplers to different parts of a model from R, and compile the new samplers automatically via C++ alongside the samplers 'NIMBLE' provides. 'NIMBLE' extends the 'BUGS'/'JAGS' language by making it extensible: New distributions and functions can be added, including as calls to external compiled code. Although most people think of MCMC as the main goal of the 'BUGS'/'JAGS' language for writing models, one can use 'NIMBLE' for writing arbitrary other kinds of model-generic algorithms as well. A full User Manual is available at <http://r-nimble.org>.
Author: Perry de Valpine, Christopher Paciorek, Daniel Turek, Cliff Anderson-Bergman, Nick Michaud, Fritz Obermeyer, Duncan Temple Lang, and see AUTHORS file for additional contributors.
Maintainer: Christopher Paciorek <paciorek@stat.berkeley.edu>
Diff between nimble versions 0.6-10 dated 2018-03-25 and 0.6-11 dated 2018-06-14
DESCRIPTION | 17 INSTALL | 6 MD5 | 133 +-- NAMESPACE | 8 NEWS | 55 + R/BNP_distributions.R |only R/BNP_samplers.R |only R/BUGS_BUGSdecl.R | 20 R/BUGS_model.R | 24 R/BUGS_modelDef.R | 93 +- R/BUGS_testBUGS.R | 27 R/BUGS_utils.R | 2 R/MCMC_autoBlock.R | 6 R/MCMC_build.R | 170 ++-- R/MCMC_configuration.R | 167 +++- R/MCMC_conjugacy.R | 121 ++- R/MCMC_run.R | 120 ++- R/MCMC_samplers.R | 223 ++++-- R/MCMC_suite.R | 9 R/RCfunction_compile.R | 1 R/RCfunction_core.R | 15 R/crossValidation.R | 2 R/distributions_processInputList.R | 8 R/externalCalls.R | 8 R/filtering_auxiliary.R | 132 ++- R/filtering_bootstrap.R | 92 +- R/filtering_resamplers.R |only R/genCpp_sizeProcessing.R | 17 R/initializeModel.R | 6 R/nimbleFunction_Rexecution.R | 23 R/nimbleFunction_nodeFunction.R | 70 + R/nimbleFunction_nodeFunctionNew.R | 10 R/types_numericLists.R | 12 inst/CppCode/RcppUtils.cpp | 12 inst/CppCode/nimbleGraph.cpp | 28 inst/include/Eigen/src/Core/util/DisableStupidWarnings.h | 2 inst/include/nimble/nimbleGraph.h | 2 inst/tests/dynamicIndexingTestLists.R | 46 - inst/tests/graphStructureTestResults_Correct.Rout | 52 - inst/tests/test-Filtering2.R | 42 + inst/tests/test-bnp.R |only inst/tests/test-dynamicIndexing.R | 34 inst/tests/test-errors.R | 14 inst/tests/test-getBound.R | 44 + inst/tests/test-getParam.R | 49 + inst/tests/test-graphStructure.R | 17 inst/tests/test-mcmc.R | 131 +-- inst/tests/test-misc.R | 52 + inst/tests/test-models.R | 5 inst/tests/test-optim.R | 2 inst/tests/test_utils.R | 547 ++++++++------- man/ChineseRestaurantProcess.Rd |only man/MCMCconf-class.Rd | 54 + man/StickBreakingFunction.Rd |only man/buildAuxiliaryFilter.Rd | 3 man/buildBootstrapFilter.Rd | 1 man/buildMCMC.Rd | 45 - man/configureMCMC.Rd | 5 man/getSamplesDPmeasure.Rd |only man/modelBaseClass-class.Rd | 2 man/nimble-internal.Rd | 1 man/nimbleExternalCall.Rd | 4 man/nimbleMCMC.Rd | 4 man/nimbleRcall.Rd | 4 man/registerDistributions.Rd | 5 man/runCrossValidate.Rd | 2 man/runMCMC.Rd | 22 man/samplerAssignmentRules-class.Rd | 6 man/samplers.Rd | 53 + man/setSize.Rd | 2 man/setupOutputs.Rd | 4 71 files changed, 1972 insertions(+), 921 deletions(-)
Title: Summarise a Distribution Through Coloured Intervals
Description: Implements the functionality of the 'fanplot' package as 'geoms'
for 'ggplot2'. Designed for summarising MCMC samples from a posterior
distribution, where a visualisation is desired for several values of a
continuous covariate. Increasing posterior intervals of the sampled quantity
are mapped to a continuous colour scale.
Author: Jason Hilton [aut, cre]
Maintainer: Jason Hilton <jason_hilton@yahoo.com>
Diff between ggfan versions 0.1.1 dated 2017-11-22 and 0.1.2 dated 2018-06-14
DESCRIPTION | 6 MD5 | 60 ++-- NAMESPACE | 24 - NEWS.md | 5 R/geom_fan.R | 6 R/gp_model_fit.R | 92 +++---- R/stat_interval.R | 12 README.md | 68 ++--- build/vignette.rds |binary data/datalist | 4 inst/doc/geom_fan.R | 212 ++++++++--------- inst/doc/geom_fan.html | 460 +++++++++++++++++++------------------- inst/doc/ggfan_stan.R | 104 ++++---- inst/doc/ggfan_stan.html | 405 ++++++++++++++++----------------- inst/stan/latent_gp_pois.stan | 96 +++---- man/GeomIntervalPath.Rd | 20 - man/GeomIntervalPoly.Rd | 20 - man/StatInterval.Rd | 20 - man/StatIntervalFctr.Rd | 20 - man/StatSample.Rd | 20 - man/calc_quantiles.Rd | 72 ++--- man/fake_df.Rd | 80 +++--- man/geom_fan.Rd | 216 ++++++++--------- man/geom_interval.Rd | 218 +++++++++--------- man/ggfan.Rd | 64 ++--- man/gp_model_fit.Rd | 102 ++++---- man/stat_interval.Rd | 122 +++++----- man/stat_sample.Rd | 128 +++++----- tests/testthat.R | 8 vignettes/geom_fan.md | 508 +++++++++++++++++++++--------------------- vignettes/ggfan_stan.md | 332 +++++++++++++-------------- 31 files changed, 1756 insertions(+), 1748 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2013-12-05 0.99
2012-08-09 0.98
2009-10-11 0.97
2009-04-15 0.96
2007-10-22 0.95
2007-10-21 0.94-1
2007-08-25 0.94
2006-04-27 0.92
Title: Recategorization of Factor Variables by Decision Tree Leaves
Description: Provides users the ability to categorize categorical variables dependent on a response variable.
It creates a decision tree by using one of the categorical variables (class factor) and the selected response variable.
The decision tree is created from the rpart() function from the 'rpart' package. The rules from the leaves of
the decision tree are extracted, and used to recategorize the appropriate categorical variable (predictor). This
step is performed for each of the categorical variables that is fed into the data component of
the function. Only variables containing more than 2 factor levels will be considered in the function.
The final output generates a data set containing the recategorized variables or a list containing a mapping table
for each of the candidate variables. For more details see T. Hastie et al (2009, ISBN: 978-0-387-84857-0).
Author: Piro Polo [aut, cre]
Maintainer: Piro Polo <piropolo98@gmail.com>
Diff between tree.bins versions 0.1.0 dated 2018-02-26 and 0.1.1 dated 2018-06-14
tree.bins-0.1.0/tree.bins/tests/testthat/test.bin.oth.R |only tree.bins-0.1.0/tree.bins/tests/testthat/test.tree.bins.R |only tree.bins-0.1.1/tree.bins/DESCRIPTION | 10 - tree.bins-0.1.1/tree.bins/MD5 | 20 +- tree.bins-0.1.1/tree.bins/R/tree.bins.R | 62 ++++++- tree.bins-0.1.1/tree.bins/inst/doc/tree.bins.R | 32 ++- tree.bins-0.1.1/tree.bins/inst/doc/tree.bins.Rmd | 76 ++++++--- tree.bins-0.1.1/tree.bins/inst/doc/tree.bins.html | 118 +++++++++++--- tree.bins-0.1.1/tree.bins/man/tree.bins.Rd | 21 +- tree.bins-0.1.1/tree.bins/tests/testthat.R | 5 tree.bins-0.1.1/tree.bins/tests/testthat/test-bin.oth.R |only tree.bins-0.1.1/tree.bins/tests/testthat/test-tree.bins.R |only tree.bins-0.1.1/tree.bins/vignettes/tree.bins.Rmd | 76 ++++++--- 13 files changed, 315 insertions(+), 105 deletions(-)
Title: A Simple Package for Testing R Packages
Description: Provides two convenience functions assert() and test_pkg() to
facilitate testing R packages.
Author: Yihui Xie [aut, cre] (<https://orcid.org/0000-0003-0645-5666>)
Maintainer: Yihui Xie <xie@yihui.name>
Diff between testit versions 0.7 dated 2017-05-22 and 0.8 dated 2018-06-14
DESCRIPTION | 14 +++++------ MD5 | 10 ++++---- NAMESPACE | 1 NEWS | 9 ++++++- R/testit.R | 70 +++++++++++++++++++++++++++++++++++++--------------------- man/assert.Rd | 54 ++++++++++++++++++++++++-------------------- 6 files changed, 95 insertions(+), 63 deletions(-)
Title: Utility Functions for 'spatstat'
Description: Contains utility functions for the 'spatstat' package
which may also be useful for other purposes.
Author: Adrian Baddeley [aut, cre],
Rolf Turner [aut],
Ege Rubak [aut]
Maintainer: Adrian Baddeley <Adrian.Baddeley@curtin.edu.au>
Diff between spatstat.utils versions 1.8-0 dated 2017-11-20 and 1.8-2 dated 2018-06-14
DESCRIPTION | 8 ++--- MD5 | 14 ++++----- R/resolve.defaults.R | 9 ++++-- R/tapplysum.R | 8 ++++- R/utilseq.R | 65 +++++++++++++++++++++------------------------- inst/doc/packagesizes.txt | 2 - man/macros/defns.Rd | 2 - man/tapplysum.Rd | 3 +- 8 files changed, 59 insertions(+), 52 deletions(-)
More information about spatstat.utils at CRAN
Permanent link
Title: Polygon Clipping
Description: R port of Angus Johnson's open source library Clipper. Performs polygon clipping operations (intersection, union, set minus, set difference) for polygonal regions of arbitrary complexity, including holes. Computes offset polygons (spatial buffer zones, morphological dilations, Minkowski dilations) for polygonal regions and polygonal lines. Computes Minkowski Sum of general polygons. There is a function for removing self-intersections from polygon data.
Author: Angus Johnson [aut] (C++ original,
http://www.angusj.com/delphi/clipper.php),
Adrian Baddeley [aut, trl, cre],
Kurt Hornik [ctb],
Brian D. Ripley [ctb],
Elliott Sales de Andrade [ctb]
Maintainer: Adrian Baddeley <Adrian.Baddeley@curtin.edu.au>
Diff between polyclip versions 1.8-7 dated 2018-05-16 and 1.9-0 dated 2018-06-14
DESCRIPTION | 10 ++++++---- MD5 | 11 ++++++----- NAMESPACE | 4 +--- NEWS |only R/clipper.R | 34 +++++++++++++++++++++------------- configure | 18 +++++++++--------- configure.ac | 2 +- 7 files changed, 44 insertions(+), 35 deletions(-)
Title: Tables with Labels and Some Useful Functions from Spreadsheets
and 'SPSS' Statistics
Description: Package provides tabulation functions with support for 'SPSS'-style
labels, multiple / nested banners, weights, multiple-response variables
and significance testing. There are facilities for nice output of tables
in 'knitr', R notebooks, 'Shiny' and 'Jupyter' notebooks. Proper methods
for labelled variables add value labels support to base R functions and to
some functions from other packages. Additionally, the package offers
useful functions for data processing in marketing research / social
surveys - popular data transformation functions from 'SPSS' Statistics
('RECODE', 'COUNT', 'COMPUTE', 'DO IF', etc.) and 'Excel' ('COUNTIF',
'VLOOKUP', etc.). Package is intended to help people to move data
processing from 'Excel'/'SPSS' to R.
Author: Gregory Demin [aut, cre]
Maintainer: Gregory Demin <gdemin@gmail.com>
Diff between expss versions 0.8.6 dated 2018-01-24 and 0.8.7 dated 2018-06-14
expss-0.8.6/expss/man/split_separate.Rd |only expss-0.8.6/expss/tests/testthat/rds/split_columns4.RDS |only expss-0.8.6/expss/tests/testthat/rds/split_columns4subheafings.RDS |only expss-0.8.6/expss/tests/testthat/rds/split_columns5.RDS |only expss-0.8.6/expss/tests/testthat/rds/split_labels1.RDS |only expss-0.8.6/expss/tests/testthat/rds/split_labels2.RDS |only expss-0.8.6/expss/tests/testthat/rds/split_labels3.RDS |only expss-0.8.6/expss/tests/testthat/rds/split_labels4.RDS |only expss-0.8.6/expss/tests/testthat/rds/split_labels5.RDS |only expss-0.8.6/expss/tests/testthat/test_html_datatable.R |only expss-0.8.7/expss/DESCRIPTION | 8 expss-0.8.7/expss/MD5 | 483 expss-0.8.7/expss/NAMESPACE | 1327 - expss-0.8.7/expss/NEWS | 200 expss-0.8.7/expss/R/S3_methods.R | 810 expss-0.8.7/expss/R/aaa_utils.R | 1346 - expss-0.8.7/expss/R/add_rows.R | 322 expss-0.8.7/expss/R/apply_labels.R | 348 expss-0.8.7/expss/R/as.etable.R | 204 expss-0.8.7/expss/R/category.R | 294 expss-0.8.7/expss/R/common_table_utils.R | 564 expss-0.8.7/expss/R/count_if.R | 1050 expss-0.8.7/expss/R/criteria_functions.R | 754 expss-0.8.7/expss/R/cro.R | 2268 - expss-0.8.7/expss/R/cro_fun.R | 2006 - expss-0.8.7/expss/R/custom_tables.R | 2522 +- expss-0.8.7/expss/R/custom_tables_significance.R | 372 expss-0.8.7/expss/R/default_dataset.R | 120 expss-0.8.7/expss/R/dichotomy.R | 502 expss-0.8.7/expss/R/do_repeat.R | 426 expss-0.8.7/expss/R/drop_empty.R | 346 expss-0.8.7/expss/R/dtfrm.R | 204 expss-0.8.7/expss/R/expss.R | 411 expss-0.8.7/expss/R/expss_options.R | 210 expss-0.8.7/expss/R/fctr.R | 220 expss-0.8.7/expss/R/fre.R | 364 expss-0.8.7/expss/R/from_text.R | 284 expss-0.8.7/expss/R/grouping.R | 244 expss-0.8.7/expss/R/html_datatable.R | 490 expss-0.8.7/expss/R/html_table.R | 842 expss-0.8.7/expss/R/if_na.R | 246 expss-0.8.7/expss/R/if_val.R | 1112 expss-0.8.7/expss/R/info.R | 194 expss-0.8.7/expss/R/keep.R | 360 expss-0.8.7/expss/R/labels.R | 1196 - expss-0.8.7/expss/R/match.R | 272 expss-0.8.7/expss/R/merge.R | 370 expss-0.8.7/expss/R/modify.R | 916 expss-0.8.7/expss/R/mrset.R | 158 expss-0.8.7/expss/R/na_if.R | 160 expss-0.8.7/expss/R/names2labels.R | 274 expss-0.8.7/expss/R/nest.R | 363 expss-0.8.7/expss/R/prepend_names.R | 412 expss-0.8.7/expss/R/product_test.R | 76 expss-0.8.7/expss/R/prop.R | 322 expss-0.8.7/expss/R/qc.R | 132 expss-0.8.7/expss/R/read_spss.R | 204 expss-0.8.7/expss/R/ref.R | 182 expss-0.8.7/expss/R/selectors.R | 657 expss-0.8.7/expss/R/significance_cases.R | 262 expss-0.8.7/expss/R/significance_cpct.R | 1340 - expss-0.8.7/expss/R/significance_means.R | 762 expss-0.8.7/expss/R/significance_pvalue.R | 188 expss-0.8.7/expss/R/sort.R | 260 expss-0.8.7/expss/R/split_labels.R | 944 expss-0.8.7/expss/R/split_separate.R | 290 expss-0.8.7/expss/R/sum.R | 534 expss-0.8.7/expss/R/tab_sort.R | 330 expss-0.8.7/expss/R/values2labels.R | 130 expss-0.8.7/expss/R/vec_ops.R | 510 expss-0.8.7/expss/R/vlookup.R | 682 expss-0.8.7/expss/R/weighted_stats.R | 785 expss-0.8.7/expss/R/where.R | 204 expss-0.8.7/expss/R/window_fun.R | 92 expss-0.8.7/expss/R/write_labels.R | 1041 expss-0.8.7/expss/R/zzz_experimental.R | 532 expss-0.8.7/expss/build/vignette.rds |binary expss-0.8.7/expss/inst/doc/labels-support.R | 87 expss-0.8.7/expss/inst/doc/labels-support.Rmd | 128 expss-0.8.7/expss/inst/doc/labels-support.html | 456 expss-0.8.7/expss/inst/doc/tables-with-labels.R | 950 expss-0.8.7/expss/inst/doc/tables-with-labels.Rmd | 1573 - expss-0.8.7/expss/inst/doc/tables-with-labels.html |11677 +++++----- expss-0.8.7/expss/man/add_rows.Rd | 146 expss-0.8.7/expss/man/apply_labels.Rd | 122 expss-0.8.7/expss/man/as.category.Rd | 126 expss-0.8.7/expss/man/as.datatable_widget.Rd | 163 expss-0.8.7/expss/man/as.dichotomy.Rd | 234 expss-0.8.7/expss/man/as.etable.Rd | 72 expss-0.8.7/expss/man/as.labelled.Rd | 56 expss-0.8.7/expss/man/by_groups.Rd | 112 expss-0.8.7/expss/man/compare_proportions.Rd | 170 expss-0.8.7/expss/man/count_if.Rd | 646 expss-0.8.7/expss/man/criteria.Rd | 384 expss-0.8.7/expss/man/cro.Rd | 438 expss-0.8.7/expss/man/cro_fun.Rd | 548 expss-0.8.7/expss/man/default_dataset.Rd | 86 expss-0.8.7/expss/man/do_repeat.Rd | 196 expss-0.8.7/expss/man/drop_empty_rows.Rd | 142 expss-0.8.7/expss/man/experimental.Rd | 384 expss-0.8.7/expss/man/expss.Rd | 104 expss-0.8.7/expss/man/expss.options.Rd | 152 expss-0.8.7/expss/man/fctr.Rd | 94 expss-0.8.7/expss/man/fre.Rd | 156 expss-0.8.7/expss/man/from_text.Rd | 126 expss-0.8.7/expss/man/htmlTable.etable.Rd | 166 expss-0.8.7/expss/man/if_na.Rd | 178 expss-0.8.7/expss/man/if_val.Rd | 460 expss-0.8.7/expss/man/info.Rd | 74 expss-0.8.7/expss/man/keep.Rd | 142 expss-0.8.7/expss/man/match_row.Rd | 136 expss-0.8.7/expss/man/merge.etable.Rd | 128 expss-0.8.7/expss/man/modify.Rd | 391 expss-0.8.7/expss/man/mrset.Rd | 98 expss-0.8.7/expss/man/na_if.Rd | 154 expss-0.8.7/expss/man/names2labels.Rd | 108 expss-0.8.7/expss/man/nest.Rd | 124 expss-0.8.7/expss/man/prepend_values.Rd | 180 expss-0.8.7/expss/man/product_test.Rd | 82 expss-0.8.7/expss/man/prop.Rd | 96 expss-0.8.7/expss/man/qc.Rd | 90 expss-0.8.7/expss/man/read_spss.Rd | 86 expss-0.8.7/expss/man/reexports.Rd | 214 expss-0.8.7/expss/man/ref.Rd | 134 expss-0.8.7/expss/man/sheet.Rd | 148 expss-0.8.7/expss/man/significance.Rd | 596 expss-0.8.7/expss/man/sort_asc.Rd | 106 expss-0.8.7/expss/man/split_by.Rd |only expss-0.8.7/expss/man/split_labels.Rd | 204 expss-0.8.7/expss/man/sum_row.Rd | 236 expss-0.8.7/expss/man/tab_sort_asc.Rd | 148 expss-0.8.7/expss/man/tables.Rd | 936 expss-0.8.7/expss/man/unlab.Rd | 58 expss-0.8.7/expss/man/val_lab.Rd | 304 expss-0.8.7/expss/man/values2labels.Rd | 70 expss-0.8.7/expss/man/var_lab.Rd | 148 expss-0.8.7/expss/man/vars.Rd | 326 expss-0.8.7/expss/man/vectors.Rd | 248 expss-0.8.7/expss/man/vlookup.Rd | 340 expss-0.8.7/expss/man/w_mean.Rd | 242 expss-0.8.7/expss/man/where.Rd | 108 expss-0.8.7/expss/man/window_fun.Rd | 62 expss-0.8.7/expss/man/write_labels.Rd | 264 expss-0.8.7/expss/tests/testthat.R | 12 expss-0.8.7/expss/tests/testthat/rds/cro_mean_out.txt | 14 expss-0.8.7/expss/tests/testthat/rds/fre_out.txt | 16 expss-0.8.7/expss/tests/testthat/rds/fre_out_unrounded.txt | 16 expss-0.8.7/expss/tests/testthat/rds/htmlTable20.rds |only expss-0.8.7/expss/tests/testthat/rds/htmlTable21.rds |only expss-0.8.7/expss/tests/testthat/rds/nsk_R3.4.rds |binary expss-0.8.7/expss/tests/testthat/rds/print_etable.txt | 46 expss-0.8.7/expss/tests/testthat/rds/print_etable_2.txt | 92 expss-0.8.7/expss/tests/testthat/rds/print_etable_commented_1.txt | 92 expss-0.8.7/expss/tests/testthat/rds/print_etable_commented_2.txt | 46 expss-0.8.7/expss/tests/testthat/rds/print_etable_commented_3.txt | 92 expss-0.8.7/expss/tests/testthat/rds/print_etable_custom_label.txt | 46 expss-0.8.7/expss/tests/testthat/rds/print_etable_digits2.txt | 46 expss-0.8.7/expss/tests/testthat/rds/print_etable_digits2_2.txt | 92 expss-0.8.7/expss/tests/testthat/rds/print_etable_raw.txt | 36 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