Title: Datasets for Spatial Analysis
Description: Diverse spatial datasets for demonstrating, benchmarking and teaching spatial data analysis.
It includes R data of class sf (defined by the package 'sf'), Spatial ('sp'), and nb ('spdep').
Unlike other spatial data packages such as 'rnaturalearth' and 'maps',
it also contains data stored in a range of file formats including GeoJSON, ESRI Shapefile and GeoPackage.
Some of the datasets are designed to illustrate specific analysis techniques.
cycle_hire() and cycle_hire_osm(), for example, is designed to illustrate point pattern analysis techniques.
Author: Roger Bivand [aut] (<https://orcid.org/0000-0003-2392-6140>),
Jakub Nowosad [aut, cre] (<https://orcid.org/0000-0002-1057-3721>),
Robin Lovelace [aut] (<https://orcid.org/0000-0001-5679-6536>),
Mark Monmonier [ctb] (author of the state.vbm dataset),
Greg Snow [ctb] (author of the state.vbm dataset)
Maintainer: Jakub Nowosad <nowosad.jakub@gmail.com>
Diff between spData versions 0.2.9.3 dated 2018-08-01 and 0.2.9.4 dated 2018-09-15
DESCRIPTION | 8 - MD5 | 6 data/world.rda |binary inst/misc/world_wkt.csv | 348 ++++++++++++++++++++++++------------------------ 4 files changed, 181 insertions(+), 181 deletions(-)
Title: Fast Estimators for Design-Based Inference
Description: Fast procedures for small set of commonly-used, design-appropriate estimators with robust standard errors and confidence intervals. Includes estimators for linear regression, instrumental variables regression, difference-in-means, Horvitz-Thompson estimation, and regression improving precision of experimental estimates by interacting treatment with centered pre-treatment covariates introduced by Lin (2013) <doi:10.1214/12-AOAS583>.
Author: Graeme Blair [aut, cre],
Jasper Cooper [aut],
Alexander Coppock [aut],
Macartan Humphreys [aut],
Luke Sonnet [aut],
Neal Fultz [ctb]
Maintainer: Graeme Blair <graeme.blair@ucla.edu>
Diff between estimatr versions 0.10.0 dated 2018-07-12 and 0.12 dated 2018-09-15
DESCRIPTION | 8 +- MD5 | 42 ++++++------ NEWS.md | 11 +++ R/estimatr_difference_in_means.R | 5 + R/estimatr_horvitz_thompson.R | 2 R/estimatr_iv_robust.R | 2 R/estimatr_lm_lin.R | 19 ++++- R/estimatr_lm_robust.R | 4 - R/helper_clean_model_data.R | 4 + R/helper_lm_robust_fit.R | 2 R/helper_starprep.R | 2 man/difference_in_means.Rd | 2 man/horvitz_thompson.Rd | 2 man/iv_robust.Rd | 2 man/lm_lin.Rd | 4 - man/lm_robust.Rd | 4 - src/lm_robust_helper.cpp | 22 ++++-- tests/testthat/test-difference-in-means.R | 97 ++++++++++++++++++++++++++++++ tests/testthat/test-lm-cluster.R | 16 ++++ tests/testthat/test-lm-lin.R | 35 ++++++++++ tests/testthat/test-lm-robust.R | 9 ++ tests/testthat/test-lm-robust_margins.R | 9 ++ 22 files changed, 251 insertions(+), 52 deletions(-)
Title: Miscellaneous Utilities and Functions
Description: A collection of miscellaneous tools and functions,
such as tools to generate descriptive statistics tables,
format output, visualize relations among variables or check
distributions.
Author: Joshua F. Wiley <jwiley.psych@gmail.com>
Maintainer: Joshua F. Wiley <jwiley.psych@gmail.com>
Diff between JWileymisc versions 0.3.0 dated 2018-08-26 and 0.3.1 dated 2018-09-15
JWileymisc-0.3.0/JWileymisc/man/ezMULTINOM.Rd |only JWileymisc-0.3.1/JWileymisc/DESCRIPTION | 16 JWileymisc-0.3.1/JWileymisc/MD5 | 29 JWileymisc-0.3.1/JWileymisc/NAMESPACE | 9 JWileymisc-0.3.1/JWileymisc/NEWS.md | 24 JWileymisc-0.3.1/JWileymisc/R/descriptives.R | 4 JWileymisc-0.3.1/JWileymisc/R/models.R | 904 +++++++++++---- JWileymisc-0.3.1/JWileymisc/R/plotting.R | 105 + JWileymisc-0.3.1/JWileymisc/R/styler.R | 2 JWileymisc-0.3.1/JWileymisc/R/utils.R | 456 ------- JWileymisc-0.3.1/JWileymisc/man/R2LMER.Rd | 2 JWileymisc-0.3.1/JWileymisc/man/TukeyHSDgg.Rd | 3 JWileymisc-0.3.1/JWileymisc/man/compareLMER.Rd | 2 JWileymisc-0.3.1/JWileymisc/man/detailedTests.Rd | 93 - JWileymisc-0.3.1/JWileymisc/man/dot-detailedTestsLMER.Rd |only JWileymisc-0.3.1/JWileymisc/man/dot-detailedTestsVGLM.Rd |only JWileymisc-0.3.1/JWileymisc/man/testdistr.Rd | 10 17 files changed, 910 insertions(+), 749 deletions(-)
Title: R Interface to the 'Deutsche Nationalbibliothek (German National
Library) API'
Description: A wrapper for the 'Deutsche Nationalbibliothek (German National
Library) API', available at <http://www.dnb.de>. The German National Library is
the German central archival library, collecting, archiving, bibliographically
classifying all German and German-language publications, foreign
publications about Germany, translations of German works, and the works of
German-speaking emigrants published abroad between 1933 and 1945. A personal
access token is required for usage.
Author: Christian Graul [aut, cre]
Maintainer: Christian Graul <christian.graul@gmail.com>
Diff between rdnb versions 0.1-1 dated 2017-02-14 and 0.1-2 dated 2018-09-15
DESCRIPTION | 13 MD5 | 19 - NAMESPACE | 1 R/rdnb.R | 1 R/utils.R | 42 ++ R/zzz.R | 4 build/vignette.rds |binary inst/NEWS | 39 +- inst/doc/rdnb_vignette.html | 722 +++++++++++++++++++++++++------------------- man/rdnb.Rd | 1 man/save_token.Rd |only 11 files changed, 498 insertions(+), 344 deletions(-)
Title: Time Series Plot
Description: A fast and elegant time series visualization package. In addition to the
standard R plot types, this package supports candle sticks, open-high-low-close, and
volume plots. Useful for visualizing any time series data, e.g., stock prices and
technical indicators.
Author: RTSVizTeam [aut, cph],
Irina Kapler [cre]
Maintainer: Irina Kapler <irkapler@gmail.com>
Diff between rtsplot versions 0.1.0 dated 2018-05-29 and 0.1.1 dated 2018-09-15
DESCRIPTION | 21 +-- LICENSE | 4 MD5 | 28 ++-- NAMESPACE | 6 NEWS.md |only R/rtsplot.r | 287 +++++++++++++++++++++++++++++++++-------- R/utils.r | 13 - README.md | 10 + man/Colors.Rd |only man/rtsplot.Rd | 20 -- man/rtsplot.candle.Rd |only man/rtsplot.fake.stock.data.Rd |only man/rtsplot.hl.Rd |only man/rtsplot.legend.Rd | 10 + man/rtsplot.lines.Rd | 14 ++ man/rtsplot.ohlc.Rd |only man/rtsplot.text.Rd | 11 + man/rtsplot2Y.Rd | 34 ++-- 18 files changed, 335 insertions(+), 123 deletions(-)
Title: An Alternative Conflict Resolution Strategy
Description: R's default conflict management system gives the most recently
loaded package precedence. This can make it hard to detect conflicts,
particularly when they arise because a package update creates ambiguity
that did not previously exist. 'conflicted' takes a different approach,
making every conflict an error and forcing you to choose which function
to use.
Author: Hadley Wickham [aut, cre],
RStudio [cph]
Maintainer: Hadley Wickham <hadley@rstudio.com>
Diff between conflicted versions 0.1.0 dated 2018-05-31 and 1.0.0 dated 2018-09-15
conflicted-0.1.0/conflicted/tests/testthat/conflicts-error.txt |only conflicted-0.1.0/conflicted/tests/testthat/test-conflicts.R |only conflicted-1.0.0/conflicted/DESCRIPTION | 12 - conflicted-1.0.0/conflicted/MD5 | 34 ++-- conflicted-1.0.0/conflicted/NAMESPACE | 4 conflicted-1.0.0/conflicted/NEWS.md |only conflicted-1.0.0/conflicted/R/conflicts.R | 68 ++------ conflicted-1.0.0/conflicted/R/disambiguate.R |only conflicted-1.0.0/conflicted/R/find.R |only conflicted-1.0.0/conflicted/R/package.R | 40 +++-- conflicted-1.0.0/conflicted/R/prefer.R |only conflicted-1.0.0/conflicted/R/shim.R | 7 conflicted-1.0.0/conflicted/R/utils.R | 38 ++++ conflicted-1.0.0/conflicted/R/zzz.R | 4 conflicted-1.0.0/conflicted/README.md | 80 ++++++++-- conflicted-1.0.0/conflicted/man/conflict_prefer.Rd |only conflicted-1.0.0/conflicted/man/conflict_scout.Rd |only conflicted-1.0.0/conflicted/man/conflicted-package.Rd | 9 - conflicted-1.0.0/conflicted/tests/testthat/test-disambiguate.R |only conflicted-1.0.0/conflicted/tests/testthat/test-disambiguate.txt |only conflicted-1.0.0/conflicted/tests/testthat/test-find.R |only conflicted-1.0.0/conflicted/tests/testthat/test-prefer.R |only conflicted-1.0.0/conflicted/tests/testthat/test-shim.R | 12 + conflicted-1.0.0/conflicted/tests/testthat/test-zzz.R | 2 24 files changed, 209 insertions(+), 101 deletions(-)
Title: Modeling Over Dispersed Binomial Outcome Data Using BMD and ABD
Description: Contains Probability Mass Functions, Cumulative Mass Functions, Negative Log Likelihood value, parameter estimation and modeling data using Binomial Mixture Distributions (BMD) (Manoj et al (2013) <doi:10.5539/ijsp.v2n2p24>) and Alternate Binomial Distributions (ABD) (Paul (1985) <doi:10.1080/03610928508828990>).
Author: Amalan Mahendran [aut, cre],
Pushpakanthie Wijekoon [aut, ctb]
Maintainer: Amalan Mahendran <amalan0595@gmail.com>
Diff between fitODBOD versions 1.1.0 dated 2018-02-27 and 1.2.0 dated 2018-09-15
DESCRIPTION | 18 +- MD5 | 186 +++++++++++++++++------------- NAMESPACE | 10 + R/AddBin.R | 39 +++--- R/Beta.R | 25 ++-- R/BetaCorrBin.R |only R/COMPBin.R |only R/CorrBin.R | 193 ++++++++++++++++---------------- R/Data.R | 78 +++++++++--- R/GHGbeta.R | 23 ++- R/Gbeta1.R | 14 +- R/Kumaraswamy.R | 60 +++++---- R/MultiBin.R | 50 ++++---- R/Triangle.R | 25 ++-- data/Male_Children.rda |only man/Alcohol_data.Rd | 12 - man/Chromosome_data.Rd | 2 man/Course_data.Rd | 4 man/EstMGFBetaBin.Rd | 2 man/EstMLEAddBin.Rd | 6 man/EstMLEBetaBin.Rd | 2 man/EstMLEBetaCorrBin.Rd |only man/EstMLECOMPBin.Rd |only man/EstMLECorrBin.Rd | 6 man/EstMLEGHGBB.Rd | 2 man/EstMLEKumBin.Rd | 9 - man/EstMLEMcGBB.Rd | 5 man/EstMLEMultiBin.Rd | 4 man/EstMLETriBin.Rd | 5 man/Exam_data.Rd | 2 man/Male_Children.Rd |only man/NegLLAddBin.Rd | 2 man/NegLLBetaCorrBin.Rd |only man/NegLLCOMPBin.Rd |only man/NegLLCorrBin.Rd | 2 man/NegLLGHGBB.Rd | 2 man/NegLLMultiBin.Rd | 2 man/Plant_DiseaseData.Rd | 4 man/Terror_data_ARG.Rd | 8 - man/Terror_data_USA.Rd | 8 - man/dAddBin.Rd | 7 - man/dBETA.Rd | 2 man/dBetaBin.Rd | 2 man/dBetaCorrBin.Rd |only man/dCOMPBin.Rd |only man/dCorrBin.Rd | 20 +-- man/dGHGBB.Rd | 2 man/dGHGBeta.Rd | 2 man/dKUM.Rd | 4 man/dKumBin.Rd | 10 + man/dMultiBin.Rd | 13 +- man/dTRI.Rd | 2 man/dTriBin.Rd | 2 man/figures |only man/fitAddBin.Rd | 8 - man/fitBetaBin.Rd | 4 man/fitBetaCorrBin.Rd |only man/fitBin.Rd | 4 man/fitCOMPBin.Rd |only man/fitCorrBin.Rd | 14 -- man/fitGHGBB.Rd | 2 man/fitKumBin.Rd | 10 - man/fitMcGBB.Rd | 2 man/fitMultiBin.Rd | 8 - man/fitTriBin.Rd | 7 - man/mazBETA.Rd | 2 man/mazGHGBeta.Rd | 2 man/mazKUM.Rd | 4 man/mazTRI.Rd | 2 man/pAddBin.Rd | 5 man/pBETA.Rd | 2 man/pBetaBin.Rd | 2 man/pBetaCorrBin.Rd |only man/pCOMPBin.Rd |only man/pCorrBin.Rd | 20 +-- man/pGHGBB.Rd | 2 man/pGHGBeta.Rd | 2 man/pKUM.Rd | 4 man/pKumBin.Rd | 10 + man/pMultiBin.Rd | 6 man/pTRI.Rd | 2 tests/testthat/test-Alcohol_data.R |only tests/testthat/test-BODextract.R |only tests/testthat/test-Chromosome_data.R |only tests/testthat/test-Course_data.R |only tests/testthat/test-Exam_data.R |only tests/testthat/test-Male_Children.R |only tests/testthat/test-NegLLAddBin.R | 9 + tests/testthat/test-NegLLBetaCorrBin.R |only tests/testthat/test-NegLLCOMPBin.R |only tests/testthat/test-NegLLCorrBin.R | 17 ++ tests/testthat/test-Plant_DiseaseData.R |only tests/testthat/test-Terror_data_ARG.R |only tests/testthat/test-Terror_data_USA.R |only tests/testthat/test-dAddBin.R | 11 + tests/testthat/test-dBetaCorrBin.R |only tests/testthat/test-dCOMPBin.R |only tests/testthat/test-dCorrBin.R | 17 ++ tests/testthat/test-fitAddBin.R | 10 + tests/testthat/test-fitBetaBin.R | 10 + tests/testthat/test-fitBetaCorrBin.R |only tests/testthat/test-fitBin.R | 9 + tests/testthat/test-fitCOMPBin.R |only tests/testthat/test-fitCorrBin.R | 10 + tests/testthat/test-fitGHGBB.R | 10 + tests/testthat/test-fitKumBin.R | 10 + tests/testthat/test-fitMcGBB.R | 10 + tests/testthat/test-fitMultiBin.R | 10 + tests/testthat/test-fitTriBin.R | 10 + 109 files changed, 700 insertions(+), 443 deletions(-)
Title: Fixed Effects Nonlinear Maximum Likelihood Models
Description: Efficient estimation of multiple fixed-effects maximum likelihood models
with, possibly, non-linear in parameters right hand sides. Standard-errors
can easily be clustered. It also includes tools to seamlessly export (to Latex)
the results of various estimations.
Author: Laurent Berge [aut, cre]
Maintainer: Laurent Berge <laurent.berge@uni.lu>
Diff between FENmlm versions 2.2.0 dated 2018-08-04 and 2.2.1 dated 2018-09-15
DESCRIPTION | 8 MD5 | 23 - NAMESPACE | 2 R/MiscFuns.R | 467 ++++++++++++++++++++++++ R/femlm.R | 138 ++++--- build/vignette.rds |binary inst/NEWS.Rd | 20 + inst/doc/FENmlm.R | 8 inst/doc/FENmlm.Rmd | 23 - inst/doc/FENmlm.html | 793 ++++++++++++++++++++++++++---------------- man/diagnostic.Rd |only man/obs2remove.Rd |only man/print.femlm.obs2remove.Rd |only vignettes/FENmlm.Rmd | 23 - 14 files changed, 1130 insertions(+), 375 deletions(-)
Title: Propensity Clustering and Decomposition
Description: Implementation of propensity clustering and
decomposition as described in Ranola et al. (2013) <doi:10.1186/1752-0509-7-21>.
Propensity decomposition can be viewed on the
one hand as a generalization of the eigenvector-based
approximation of correlation networks, and on the other hand as
a generalization of random multigraph models and
conformity-based decompositions.
Author: John Michael O Ranola, Kenneth Lange, Steve Horvath, Peter Langfelder
Maintainer: Peter Langfelder <Peter.Langfelder@gmail.com>
Diff between PropClust versions 1.4-3 dated 2018-01-21 and 1.4-6 dated 2018-09-15
PropClust-1.4-3/PropClust/man/PropClust-package.Rd |only PropClust-1.4-6/PropClust/Changelog |only PropClust-1.4-6/PropClust/DESCRIPTION | 13 +-- PropClust-1.4-6/PropClust/MD5 | 14 +-- PropClust-1.4-6/PropClust/NAMESPACE | 2 PropClust-1.4-6/PropClust/R/PropClust-internal.R | 11 -- PropClust-1.4-6/PropClust/man/propensityClustering.Rd | 2 PropClust-1.4-6/PropClust/src/PropClustParallelTrials.f90 | 54 -------------- PropClust-1.4-6/PropClust/src/init.c | 6 - 9 files changed, 17 insertions(+), 85 deletions(-)
Title: Matrix Computation Based Identification of Prime Implicants
Description: Computes the prime implicants or a minimal disjunctive normal form for a
logic expression presented by a truth table or a logic tree. Has been particularly
developed for logic expressions resulting from a logic regression analysis, i.e.
logic expressions typically consisting of up to 16 literals, where the prime implicants
are typically composed of a maximum of 4 or 5 literals.
Author: Holger Schwender
Maintainer: Holger Schwender <holger.schw@gmx.de>
Diff between mcbiopi versions 1.1.2 dated 2012-01-04 and 1.1.5 dated 2018-09-15
DESCRIPTION | 12 +++++++----- MD5 | 12 ++++++------ NAMESPACE | 2 ++ R/getPImps.R | 5 +++++ man/generateTruthTab.Rd | 2 +- man/minDNF.Rd | 17 ++++++++++++++++- man/prime.implicants.Rd | 16 +++++++++++++++- 7 files changed, 52 insertions(+), 14 deletions(-)
Title: Visualisation of High-Throughput Behavioural (i.e. Ethomics)
Data
Description: Extension of 'ggplot2' providing layers, scales and preprocessing functions
useful to represent behavioural variables that are recorded over multiple animals and days.
This package is part of the rethomics framework <http://rethomics.github.io/>.
Author: Quentin Geissmann [aut, cre]
Maintainer: Quentin Geissmann <qgeissmann@gmail.com>
Diff between ggetho versions 0.3.2 dated 2018-05-28 and 0.3.3 dated 2018-09-15
DESCRIPTION | 10 ++-- MD5 | 18 +++---- R/stat-pop-etho.R | 4 - man/geom_peak.Rd | 33 +++++++------- man/ggetho.Rd | 6 +- man/id_labeller.Rd | 2 man/stat_ld_annotations.Rd | 43 +++++++++--------- man/stat_pop_etho.Rd | 33 +++++++------- man/stat_tile_etho.Rd | 33 +++++++------- man/time_scales.Rd | 106 ++++++++++++++++++++++----------------------- 10 files changed, 151 insertions(+), 137 deletions(-)
Title: Functional Time Series Analysis
Description: Functions for visualizing, modeling, forecasting and hypothesis testing of functional time series.
Author: Rob J Hyndman and Han Lin Shang
Maintainer: Han Lin Shang <hanlin.shang@anu.edu.au>
Diff between ftsa versions 4.9 dated 2018-08-23 and 5.0 dated 2018-09-15
ftsa-4.9/ftsa/R/diff.R |only ftsa-4.9/ftsa/R/diff.default.R |only ftsa-4.9/ftsa/build |only ftsa-4.9/ftsa/inst/doc/ftsa.R |only ftsa-4.9/ftsa/inst/doc/ftsa.Rnw |only ftsa-4.9/ftsa/inst/doc/ftsa_test.Rnw |only ftsa-5.0/ftsa/ChangeLog | 5 +++++ ftsa-5.0/ftsa/DESCRIPTION | 8 ++++---- ftsa-5.0/ftsa/MD5 | 17 ++++++----------- ftsa-5.0/ftsa/inst/doc/ftsa.pdf |binary ftsa-5.0/ftsa/inst/doc/ftsa_test.pdf |binary ftsa-5.0/ftsa/man/farforecast.Rd | 6 ------ ftsa-5.0/ftsa/vignettes/ftsa.tex |only 13 files changed, 15 insertions(+), 21 deletions(-)
Title: Generate, Visualise, and Evaluate Fast-and-Frugal Decision Trees
Description: Create, visualize, and test fast-and-frugal decision trees (FFTs). FFTs are very simple decision trees for
binary classification problems. FFTs can be preferable to more complex algorithms because they are easy to communicate, require very little information, and are
robust against overfitting.
Author: Nathaniel Phillips [aut, cre],
Hansjoerg Neth [aut],
Jan Woike [aut],
Wolfgang Gaissmaer [aut]
Maintainer: Nathaniel Phillips <Nathaniel.D.Phillips.is@gmail.com>
Diff between FFTrees versions 1.3.5 dated 2017-11-01 and 1.4.0 dated 2018-09-15
FFTrees-1.3.5/FFTrees/R/auc_function.R |only FFTrees-1.3.5/FFTrees/R/comppred_function.R |only FFTrees-1.3.5/FFTrees/inst/HeartFFT.jpg |only FFTrees-1.3.5/FFTrees/man/auc.Rd |only FFTrees-1.4.0/FFTrees/DESCRIPTION | 10 FFTrees-1.4.0/FFTrees/MD5 | 125 +-- FFTrees-1.4.0/FFTrees/NAMESPACE | 7 FFTrees-1.4.0/FFTrees/R/Add_Stats.R |only FFTrees-1.4.0/FFTrees/R/FFForest.R | 52 - FFTrees-1.4.0/FFTrees/R/FFTrees.R | 294 ++++---- FFTrees-1.4.0/FFTrees/R/applytree_function.R | 329 +++++---- FFTrees-1.4.0/FFTrees/R/classtable_function.R | 179 ++--- FFTrees-1.4.0/FFTrees/R/cuerank_function.R | 488 +++---------- FFTrees-1.4.0/FFTrees/R/factclean_function.R | 49 - FFTrees-1.4.0/FFTrees/R/fan_algorithm.R | 517 +++++++------- FFTrees-1.4.0/FFTrees/R/growFFTrees_function.R | 35 FFTrees-1.4.0/FFTrees/R/helper.R | 596 +++++++++++++++++ FFTrees-1.4.0/FFTrees/R/heuristic_algorithm.R | 7 FFTrees-1.4.0/FFTrees/R/inwords.R | 25 FFTrees-1.4.0/FFTrees/R/plotFFTrees_function.R | 46 + FFTrees-1.4.0/FFTrees/R/predictFFTrees_function.R | 13 FFTrees-1.4.0/FFTrees/R/printFFTrees_function.R | 152 +--- FFTrees-1.4.0/FFTrees/R/summaryFFTrees_function.R | 141 +++- FFTrees-1.4.0/FFTrees/R/threshold_factor_grid.R |only FFTrees-1.4.0/FFTrees/R/threshold_numeric_grid.R |only FFTrees-1.4.0/FFTrees/R/wordstoFFT.R | 19 FFTrees-1.4.0/FFTrees/R/zzz.R | 9 FFTrees-1.4.0/FFTrees/README.md | 26 FFTrees-1.4.0/FFTrees/build/vignette.rds |binary FFTrees-1.4.0/FFTrees/data/breastcancer.RData |binary FFTrees-1.4.0/FFTrees/data/heartcost.RData |binary FFTrees-1.4.0/FFTrees/data/heartdisease.RData |binary FFTrees-1.4.0/FFTrees/data/hearttest.RData |binary FFTrees-1.4.0/FFTrees/data/hearttrain.RData |binary FFTrees-1.4.0/FFTrees/inst/HeartFFT.jpeg |only FFTrees-1.4.0/FFTrees/inst/doc/AccuracyStatistics.html | 37 - FFTrees-1.4.0/FFTrees/inst/doc/FFTrees_algorithm.R | 35 FFTrees-1.4.0/FFTrees/inst/doc/FFTrees_algorithm.Rmd | 43 - FFTrees-1.4.0/FFTrees/inst/doc/FFTrees_algorithm.html | 109 +-- FFTrees-1.4.0/FFTrees/inst/doc/FFTrees_examples.html | 43 - FFTrees-1.4.0/FFTrees/inst/doc/FFTrees_function.html | 215 ++---- FFTrees-1.4.0/FFTrees/inst/doc/FFTrees_heart.R | 13 FFTrees-1.4.0/FFTrees/inst/doc/FFTrees_heart.Rmd | 22 FFTrees-1.4.0/FFTrees/inst/doc/FFTrees_heart.html | 110 +-- FFTrees-1.4.0/FFTrees/inst/doc/FFTrees_mytree.html | 93 +- FFTrees-1.4.0/FFTrees/inst/doc/FFTrees_plot.html | 14 FFTrees-1.4.0/FFTrees/inst/doc/guide.R | 6 FFTrees-1.4.0/FFTrees/inst/doc/guide.Rmd | 12 FFTrees-1.4.0/FFTrees/inst/doc/guide.html | 17 FFTrees-1.4.0/FFTrees/man/Add_Stats.Rd |only FFTrees-1.4.0/FFTrees/man/FFForest.Rd | 16 FFTrees-1.4.0/FFTrees/man/FFTrees.Rd | 61 + FFTrees-1.4.0/FFTrees/man/apply.tree.Rd | 5 FFTrees-1.4.0/FFTrees/man/classtable.Rd | 24 FFTrees-1.4.0/FFTrees/man/comp.pred.Rd | 25 FFTrees-1.4.0/FFTrees/man/cuerank.Rd | 25 FFTrees-1.4.0/FFTrees/man/factclean.Rd | 2 FFTrees-1.4.0/FFTrees/man/fan.algorithm.Rd | 15 FFTrees-1.4.0/FFTrees/man/grow.FFTrees.Rd | 13 FFTrees-1.4.0/FFTrees/man/inwords.Rd | 4 FFTrees-1.4.0/FFTrees/man/plot.FFTrees.Rd | 4 FFTrees-1.4.0/FFTrees/man/predict.FFTrees.Rd | 15 FFTrees-1.4.0/FFTrees/man/print.FFTrees.Rd | 4 FFTrees-1.4.0/FFTrees/man/summary.FFTrees.Rd | 10 FFTrees-1.4.0/FFTrees/man/threshold_factor_grid.Rd |only FFTrees-1.4.0/FFTrees/man/threshold_numeric_grid.Rd |only FFTrees-1.4.0/FFTrees/vignettes/FFTrees_algorithm.Rmd | 43 - FFTrees-1.4.0/FFTrees/vignettes/FFTrees_heart.Rmd | 22 FFTrees-1.4.0/FFTrees/vignettes/guide.Rmd | 12 69 files changed, 2387 insertions(+), 1801 deletions(-)
Title: Covariate Balance Tables and Plots
Description: Generate balance tables and plots for covariates of groups preprocessed through matching, weighting or subclassification, for example, using propensity scores. Includes integration with 'MatchIt', 'twang', 'Matching', 'optmatch', 'CBPS', 'ebal', 'WeightIt', and 'designmatch' for assessing balance on the output of their preprocessing functions. Users can also specify data for balance assessment not generated through the above packages. Also included are methods for assessing balance in clustered or multiply imputed data sets or data sets with longitudinal treatments.
Author: Noah Greifer [aut, cre]
Maintainer: Noah Greifer <noah.greifer@gmail.com>
Diff between cobalt versions 3.4.0 dated 2018-08-14 and 3.4.1 dated 2018-09-15
DESCRIPTION | 7 MD5 | 34 +-- NEWS.md | 22 ++ R/bal.plot.R | 10 - R/bal.tab.R | 34 ++- R/functions_for_processing.R | 248 +++++++++++++++++------------ R/print.bal.tab.R | 89 +++++----- R/utilities.R | 35 +--- R/x2base.R | 10 - build/partial.rdb |binary inst/doc/cobalt_A0_basic_use.Rmd | 2 inst/doc/cobalt_A0_basic_use.html | 198 +++++++++++------------ inst/doc/cobalt_A1_other_packages.html | 8 inst/doc/cobalt_A2_cluster_imp.html | 189 ++++++++++------------ inst/doc/cobalt_A3_longitudinal_treat.html | 34 +-- man/bal.tab.ps.Rd | 1 man/splitfactor.Rd | 150 ++++++++--------- vignettes/cobalt_A0_basic_use.Rmd | 2 18 files changed, 581 insertions(+), 492 deletions(-)
Title: Multivariate Interpolation
Description: Contains methods for creating multivariate
interpolations of functions on a hypercube. If available through fftw3, the DCT-II/FFT
is used to compute coefficients for a Chebyshev interpolation.
Other interpolation methods for arbitrary Cartesian grids are also provided, a piecewise multilinear,
and the Floater-Hormann barycenter method. For scattered data polyharmonic splines with a linear term
is provided. The time-critical parts are written in C for speed. All interpolants are parallelized if
used to evaluate more than one point.
Author: Simen Gaure [aut, cre] (Ragnar Frisch Centre for Economic Research)
Maintainer: Simen Gaure <Simen.Gaure@frisch.uio.no>
Diff between chebpol versions 1.7 dated 2018-08-23 and 2.0 dated 2018-09-15
DESCRIPTION | 8 MD5 | 47 +- R/interpolant.R | 7 R/ipol.R | 40 ++ R/multilinear.R | 10 R/stalker.R | 40 ++ R/tools.R | 18 + inst/NEWS.Rd |only inst/doc/chebpol.R | 7 inst/doc/chebpol.Rnw | 24 + inst/doc/chebpol.pdf |binary inst/doc/chebusage.R | 18 - inst/doc/chebusage.Rnw | 37 +- inst/doc/chebusage.pdf |binary inst/doc/stalker.R | 157 +++++---- inst/doc/stalker.Rnw | 782 ++++++++++++++++++++++++++++++++++-------------- inst/doc/stalker.pdf |binary man/interpolant.Rd | 7 man/ipol.Rd | 6 src/chebpol.c | 65 ++- src/chebpol.h | 30 + src/stalker.c | 689 ++++++++++++++++++++++++++++++++++-------- vignettes/chebpol.Rnw | 24 + vignettes/chebusage.Rnw | 37 +- vignettes/stalker.Rnw | 782 ++++++++++++++++++++++++++++++++++-------------- 25 files changed, 2075 insertions(+), 760 deletions(-)
Title: Dynamic Modeling in R
Description: Intensive longitudinal data have become increasingly prevalent in
various scientific disciplines. Many such data sets are noisy, multivariate,
and multi-subject in nature. The change functions may also be continuous, or
continuous but interspersed with periods of discontinuities (i.e., showing
regime switches). The package 'dynr' (Dynamic Modeling in R) is an R package
that implements a set of computationally efficient algorithms for handling a
broad class of linear and nonlinear discrete- and continuous-time models with
regime-switching properties under the constraint of linear Gaussian measurement
functions. The discrete-time models can generally take on the form of a state-
space or difference equation model. The continuous-time models are generally
expressed as a set of ordinary or stochastic differential equations. All
estimation and computations are performed in C, but users are provided with the
option to specify the model of interest via a set of simple and easy-to-learn
model specification functions in R. Model fitting can be performed using single-
subject time series data or multiple-subject longitudinal data.
Author: Lu Ou [aut],
Michael D. Hunter [aut, cre],
Sy-Miin Chow [aut]
Maintainer: Michael D. Hunter <mhunter.ou@gmail.com>
Diff between dynr versions 0.1.12-5 dated 2018-02-08 and 0.1.13-2 dated 2018-09-15
DESCRIPTION | 17 + MD5 | 73 +++++--- NAMESPACE | 4 NEWS | 15 + R/dynrCook.R | 70 ++++++- R/dynrData.R | 24 +- R/dynrFuncAddress.R | 6 R/dynrMi.R | 247 ++++++++++++++-------------- R/dynrModel.R | 11 - R/dynrPlot.R | 58 +++++- R/dynrRecipe.R | 36 ++-- R/dynrVersion.R | 26 ++ R/dynrVersion.R.in | 24 ++ build/partial.rdb |binary build/vignette.rds |binary demo/SDETVP.R | 6 inst/doc/InstallationForDevelopers.Rnw |only inst/doc/InstallationForDevelopers.pdf |only inst/doc/InstallationForUsers.Rnw | 62 ++++--- inst/doc/InstallationForUsers.pdf |binary inst/doc/LinearDiscreteTimeModels.R |only inst/doc/LinearDiscreteTimeModels.Rnw |only inst/doc/LinearDiscreteTimeModels.pdf |only inst/doc/NonlinearContinuousTimeModels.R |only inst/doc/NonlinearContinuousTimeModels.Rnw |only inst/doc/NonlinearContinuousTimeModels.pdf |only inst/doc/linearSDE.R |only inst/doc/linearSDE.Rmd |only inst/doc/linearSDE.html |only inst/models/failing |only inst/models/passing/errorCheckMeas.R |only man/confint.dynrCook.Rd | 10 - man/dynr.model.Rd | 5 man/dynr.version.Rd |only src/brekfis.c | 8 src/mainR.c | 8 vignettes/Figures |only vignettes/InstallationForDevelopers.Rnw |only vignettes/InstallationForUsers.Rnw | 62 ++++--- vignettes/LinearDiscreteTimeModels.Rnw |only vignettes/LinearSDE.png |only vignettes/NonlinearContinuousTimeModels.Rnw |only vignettes/linearSDE.Rmd |only vignettes/ou-hunter-chow.bib |only 44 files changed, 509 insertions(+), 263 deletions(-)
Title: A Fast, Easy-to-Use Database Interface
Description: Provides select, insert, update, upsert, and delete database operations. Supports 'PostgreSQL', 'MySQL', 'SQLite', and more, and plays nicely with the 'DBI' package.
Author: Andrew Kane [aut, cre]
Maintainer: Andrew Kane <andrew@chartkick.com>
Diff between dbx versions 0.2.1 dated 2018-08-03 and 0.2.2 dated 2018-09-15
DESCRIPTION | 13 ++- MD5 | 27 ++++--- NEWS.md | 10 ++ R/connect.R | 36 ++++++---- R/helpers.R | 64 ++++++++++++++---- R/select.R | 122 ++++++++++++++++++++--------------- R/update.R | 17 ++++ R/upsert.R | 3 README.md | 97 ++++++++++++++++++++------- man/dbxConnect.Rd | 5 + tests/testthat.R | 2 tests/testthat/helper-is.R | 22 +++++- tests/testthat/helper-run-tests.R | 48 ++++++++++++- tests/testthat/test-odbc-mysql.R |only tests/testthat/test-odbc-postgres.R |only tests/testthat/test-odbc-sqlserver.R |only 16 files changed, 336 insertions(+), 130 deletions(-)