Sun, 02 Dec 2018

Package ppcc updated to version 1.1 with previous version 1.0 dated 2017-06-28

Title: Probability Plot Correlation Coefficient Test
Description: Calculates the Probability Plot Correlation Coefficient (PPCC) between a continuous variable X and a specified distribution. The corresponding composite hypothesis test that was first introduced by Filliben (1975) <doi: 10.1080/00401706.1975.10489279> can be performed to test whether the sample X is element of either the Normal, log-Normal, Exponential, Uniform, Cauchy, Logistic, Generalized Logistic, Gumbel (GEVI), Weibull, Generalized Extreme Value, Pearson III (Gamma 2), Mielke's Kappa, Rayleigh or Generalized Logistic Distribution. The PPCC test is performed with a fast Monte-Carlo simulation.
Author: Thorsten Pohlert
Maintainer: Thorsten Pohlert <thorsten.pohlert@gmx.de>

Diff between ppcc versions 1.0 dated 2017-06-28 and 1.1 dated 2018-12-02

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Package empirical updated to version 0.2.0 with previous version 0.1.0 dated 2018-09-17

Title: Probability Distributions as Models of Data
Description: Computes continuous (not step) empirical (and nonparametric) probability density, cumulative distribution and quantile functions. Supports univariate, multivariate and conditional probability distributions, some kernel smoothing features and weighted data (possibly useful mixed with fuzzy clustering). Can compute multivariate and conditional probabilities. Also, can compute conditional medians, quantiles and modes.
Author: Abby Spurdle
Maintainer: Abby Spurdle <spurdle.a@gmail.com>

Diff between empirical versions 0.1.0 dated 2018-09-17 and 0.2.0 dated 2018-12-02

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Package DBKGrad updated to version 1.7 with previous version 1.6 dated 2014-10-25

Title: Discrete Beta Kernel Graduation of Mortality Data
Description: Allows for nonparametric graduation of mortality rates using fixed or adaptive discrete beta kernel estimator.
Author: Angelo Mazza [aut, cre], Antonio Punzo [aut]
Maintainer: Angelo Mazza <a.mazza@unict.it>

Diff between DBKGrad versions 1.6 dated 2014-10-25 and 1.7 dated 2018-12-02

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Package TreeDep updated to version 0.1.3 with previous version 0.1.2 dated 2018-09-11

Title: Air Pollution Removal by Dry Deposition on Trees
Description: The model estimates air pollution removal by dry deposition on trees. It also estimates or uses hourly values for aerodynamic resistance, boundary layer resistance, canopy resistance, stomatal resistance, cuticular resistance, mesophyll resistance, soil resistance, friction velocity and deposition velocity. It also allows plotting graphical results for a specific time period. The pollutants are nitrogen dioxide, ozone, sulphur dioxide, carbon monoxide and particulate matter. Baldocchi D (1994) <doi:10.1093/treephys/14.7-8-9.1069>. Farquhar GD, von Caemmerer S, Berry JA (1980) Planta 149: 78-90. Hirabayashi S, Kroll CN, Nowak DJ (2015) i-Tree Eco Dry Deposition Model. Nowak DJ, Crane DE, Stevens JC (2006) <doi:10.1016/j.ufug.2006.01.007>. US EPA (1999) PCRAMMET User's Guide. EPA-454/B-96-001. Weiss A, Norman JM (1985) Agricultural and Forest Meteorology 34: 205—213.
Author: Silvestre Garcia de Jalon
Maintainer: Silvestre Garcia de Jalon <s.garciadejalon@gmail.com>

Diff between TreeDep versions 0.1.2 dated 2018-09-11 and 0.1.3 dated 2018-12-02

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New package pmd with initial version 0.1.1
Package: pmd
Type: Package
Title: Paired Mass Distance Analysis for GC/LC-MS Based Non-Targeted Analysis
Version: 0.1.1
Date: 2018-10-29
Authors@R: person(given = "Miao", family = "YU", role = c("aut", "cre"), email = "yufreecas@gmail.com", comment = c(ORCID = "0000-0002-2804-6014"))
Maintainer: Miao YU <yufreecas@gmail.com>
Description: Paired mass distance (PMD) analysis proposed in Yu, Olkowicz and Pawliszyn (2018) <doi:10.1016/j.aca.2018.10.062> for gas/liquid chromatography–mass spectrometry (GC/LC-MS) based non-targeted analysis. PMD analysis including GlobalStd algorithm and structure/reaction directed analysis. GlobalStd algorithm could found independent peaks in m/z-retention time profiles based on retention time hierarchical cluster analysis and frequency analysis of paired mass distances within retention time groups. Structure directed analysis could be used to find potential relationship among those independent peaks in different retention time groups based on frequency of paired mass distances. A GUI for PMD analysis is also included as a 'shiny' application.
URL: https://yufree.github.io/pmd
BugReports: https://github.com/yufree/pmd/issues
License: GPL-2
Encoding: UTF-8
LazyData: true
Suggests: knitr, enviGCMS
VignetteBuilder: knitr
biocViews:
Depends: R (>= 2.10)
Imports: RColorBrewer, shiny, rmarkdown
RoxygenNote: 6.1.0
NeedsCompilation: no
Packaged: 2018-11-08 04:11:35 UTC; yufree
Author: Miao YU [aut, cre] (<https://orcid.org/0000-0002-2804-6014>)
Repository: CRAN
Date/Publication: 2018-12-02 17:20:03 UTC

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New package compas with initial version 0.1
Package: compas
Type: Package
Title: Conformational Manipulations of Protein Atomic Structures
Version: 0.1
Date: 2018-11-20
Author: Samuel W.K. Wong, Dylan Shi, Megan Hazlett, Jasmine Cheng
Maintainer: Samuel W.K. Wong <samuel.wong@uwaterloo.ca>
Description: Manipulate and analyze 3-D structural geometry of Protein Data Bank (PDB) files.
License: GPL-3
Imports: Rcpp (>= 0.12.18), bio3d
LinkingTo: Rcpp, RcppEigen
Depends: R (>= 3.2.0)
LazyData: true
RoxygenNote: 6.1.1
NeedsCompilation: yes
Packaged: 2018-11-20 19:13:20 UTC; Samuel
Repository: CRAN
Date/Publication: 2018-12-02 17:30:03 UTC

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New package AzureRMR with initial version 1.0.0
Package: AzureRMR
Title: Interface to 'Azure Resource Manager'
Version: 1.0.0
Authors@R: c( person("Hong", "Ooi", , "hongooi@microsoft.com", role = c("aut", "cre")), person("Microsoft", role="cph") )
Description: A lightweight but powerful R interface to the 'Azure Resource Manager' REST API. The package exposes classes and methods for 'OAuth' authentication and working with subscriptions and resource groups. It also provides functionality for creating and deleting 'Azure' resources and deploying templates. While 'AzureRMR' can be used to manage any 'Azure' service, it can also be extended by other packages to provide extra functionality for specific services.
URL: https://github.com/cloudyr/AzureRMR
BugReports: https://github.com/cloudyr/AzureRMR/issues
License: MIT + file LICENSE
VignetteBuilder: knitr
Depends: R (>= 3.3)
Imports: utils, httr (>= 1.3), jsonlite, R6
Suggests: knitr, testthat
RoxygenNote: 6.1.0.9000
NeedsCompilation: no
Packaged: 2018-11-20 19:46:15 UTC; hongooi
Author: Hong Ooi [aut, cre], Microsoft [cph]
Maintainer: Hong Ooi <hongooi@microsoft.com>
Repository: CRAN
Date/Publication: 2018-12-02 17:20:07 UTC

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New package ar.matrix with initial version 0.1.0
Package: ar.matrix
Type: Package
Title: Simulate Auto Regressive Data from Precision Matricies
Version: 0.1.0
Authors@R: c(person("Neal","Marquez",role=c("aut","cre","cph"),email="nmarquez@uw.edu"))
Author: Neal Marquez [aut, cre, cph]
Maintainer: Neal Marquez <nmarquez@uw.edu>
Description: Using sparse precision matricies and Choleski factorization simulates data that is auto-regressive.
Depends: R (>= 3.3.0)
Imports: MASS, Matrix, sparseMVN, sp
Suggests: ggplot2, leaflet
License: GPL (>= 2)
BugReports: https://github.com/nmmarquez/ar.matrix/issues
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
NeedsCompilation: no
Packaged: 2018-11-20 20:44:39 UTC; nmarquez
Repository: CRAN
Date/Publication: 2018-12-02 17:30:06 UTC

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Package smooth updated to version 2.4.7 with previous version 2.4.6 dated 2018-08-25

Title: Forecasting Using State Space Models
Description: Functions implementing Single Source of Error state space models for purposes of time series analysis and forecasting. The package includes Exponential Smoothing, SARIMA, Complex Exponential Smoothing, Simple Moving Average, Vector Exponential Smoothing in state space forms, several simulation functions and intermittent demand state space models.
Author: Ivan Svetunkov [aut, cre] (Lecturer at Centre for Marketing Analytics and Forecasting, Lancaster University, UK)
Maintainer: Ivan Svetunkov <ivan@svetunkov.ru>

Diff between smooth versions 2.4.6 dated 2018-08-25 and 2.4.7 dated 2018-12-02

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Package COMPoissonReg updated to version 0.6.0 with previous version 0.4.1 dated 2017-05-03

Title: Conway-Maxwell Poisson (COM-Poisson) Regression
Description: Fit Conway-Maxwell Poisson (COM-Poisson or CMP) regression models to count data (Sellers & Shmueli, 2010) <doi:10.1214/09-AOAS306>. The package provides functions for model estimation, dispersion testing, and diagnostics. Zero-inflated CMP regression (Sellers & Raim, 2016) <doi:10.1016/j.csda.2016.01.007> is also supported.
Author: Kimberly Sellers <kfs7@georgetown.edu> Thomas Lotze <thomas.lotze@thomaslotze.com> Andrew Raim <andrew.raim@gmail.com>
Maintainer: Andrew Raim <andrew.raim@gmail.com>

Diff between COMPoissonReg versions 0.4.1 dated 2017-05-03 and 0.6.0 dated 2018-12-02

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Package writexl updated to version 1.1 with previous version 1.0 dated 2018-05-10

Title: Export Data Frames to Excel 'xlsx' Format
Description: Zero-dependency data frame to xlsx exporter based on 'libxlsxwriter'. Fast and no Java or Excel required.
Author: Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>), John McNamara [cph] (Author of libxlsxwriter (see AUTHORS and COPYRIGHT files for details))
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>

Diff between writexl versions 1.0 dated 2018-05-10 and 1.1 dated 2018-12-02

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Package ezpickr updated to version 0.1.3 with previous version 0.1.2 dated 2018-11-30

Title: Import Various Data File Types as a Rectangular Form Using a File Picker Dialogue Box
Description: Easy data importing for the most frequently used file formats in a 'tibble' form.
Author: JooYoung Seo [aut, cre], Soyoung Choi [aut]
Maintainer: JooYoung Seo <jooyoung@psu.edu>

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Package covatest updated to version 1.1.1 with previous version 1.1.0 dated 2018-12-01

Title: Tests on Properties of Space-Time Covariance Functions
Description: Tests on properties of space-time covariance functions. Tests on symmetry, separability and for assessing different forms of non-separability are available. Moreover tests on some classes of covariance functions, such that the classes of product-sum models, Gneiting models and integrated product models have been provided.
Author: Sandra De Iaco [aut, cre], Claudia Cappello [aut], Donato Posa [aut], Sabrina Maggio [ctb]
Maintainer: Sandra De Iaco <sandra.deiaco@unisalento.it>

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Package pracma updated to version 2.2.2 with previous version 2.1.8 dated 2018-10-16

Title: Practical Numerical Math Functions
Description: Provides a large number of functions from numerical analysis and linear algebra, numerical optimization, differential equations, time series, plus some well-known special mathematical functions. Uses 'MATLAB' function names where appropriate to simplify porting.
Author: Hans W. Borchers [aut, cre]
Maintainer: Hans W. Borchers <hwborchers@googlemail.com>

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Package TPMplt updated to version 0.1.1 with previous version 0.1.0 dated 2018-10-08

Title: Tool-Kit for Dynamic Materials Model and Thermal Processing Maps
Description: Provides a simple approach for constructing dynamic materials modeling suggested by Prasad and Gegel <doi:10.1007/BF02664902>. It can easily generate various processing-maps based on this model as well. The calculation result in this package contains full materials constants, information about power dissipation efficiency factor, and rheological properties, can be exported completely also, through which further analysis and customized plots will be applicable as well.
Author: ZHANG_Chen Developer [aut, com, cre]
Maintainer: ZHANG_Chen Developer <447974102@qq.com>

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Package rsoi updated to version 0.4.0 with previous version 0.3.0 dated 2017-07-02

Title: Import Various Northern and Southern Hemisphere Climate Indices
Description: Downloads Southern Oscillation Index, Oceanic Nino Index, North Pacific Gyre Oscillation data, North Atlantic Oscillation and Arctic Oscillation. Data sources are described in the README file.
Author: Sam Albers [aut, cre] (<https://orcid.org/0000-0002-9270-7884>)
Maintainer: Sam Albers <sam.albers@gmail.com>

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Package energyr updated to version 0.1.2 with previous version 0.1.1 dated 2016-09-24

Title: Data Published by the United States Federal Energy Regulatory Commission
Description: Data published by the United States Federal Energy Regulatory Commission including electric company financial data, natural gas company financial data, hydropower plant data, liquified natural gas plant data, oil company financial data natural gas company financial data, and natural gas storage field data.
Author: Paul Govan [aut, cre] (<https://orcid.org/0000-0002-1821-8492>)
Maintainer: Paul Govan <pgovan1@aggienetwork.com>

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Package eAnalytics updated to version 0.1.4 with previous version 0.1.3 dated 2017-02-19

Title: Dynamic Web-Based Analytics for the Energy Industry
Description: A 'Shiny' web application for energy industry analytics. Take an overview of the industry, measure Key Performance Indicators, identify changes in the industry over time, and discover new relationships in the data.
Author: Paul Govan [aut, cre] (<https://orcid.org/0000-0002-1821-8492>)
Maintainer: Paul Govan <pgovan1@aggienetwork.com>

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Package BayesianNetwork updated to version 0.1.5 with previous version 0.1.3 dated 2017-07-11

Title: Bayesian Network Modeling and Analysis
Description: A 'Shiny' web application for creating interactive Bayesian Network models, learning the structure and parameters of Bayesian networks, and utilities for classic network analysis.
Author: Paul Govan [aut, cre] (<https://orcid.org/0000-0002-1821-8492>)
Maintainer: Paul Govan <pgovan1@aggienetwork.com>

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