Title: Iterated Racing for Automatic Algorithm Configuration
Description: Iterated race is an extension of the Iterated F-race method for
the automatic configuration of optimization algorithms, that is,
(offline) tuning their parameters by finding the most appropriate
settings given a set of instances of an optimization problem.
Author: Manuel López-Ibáñez [aut, cre]
(<https://orcid.org/0000-0001-9974-1295>),
Jérémie Dubois-Lacoste [aut],
Leslie Pérez Cáceres [aut],
Thomas Stützle [aut],
Mauro Birattari [aut],
Eric Yuan [ctb],
Prasanna Balaprakash [ctb]
Maintainer: Manuel López-Ibáñez <manuel.lopez-ibanez@manchester.ac.uk>
Diff between irace versions 3.2 dated 2019-04-24 and 3.3 dated 2019-04-26
irace-3.2/irace/tests/testthat/common.R |only irace-3.3/irace/DESCRIPTION | 8 +- irace-3.3/irace/MD5 | 41 ++++++------- irace-3.3/irace/NEWS | 9 ++ irace-3.3/irace/R/race.R | 13 ++-- irace-3.3/irace/R/version.R | 2 irace-3.3/irace/build/partial.rdb |binary irace-3.3/irace/inst/doc/irace-package.Rnw | 2 irace-3.3/irace/inst/doc/irace-package.pdf |binary irace-3.3/irace/tests/testthat.R | 3 irace-3.3/irace/tests/testthat/helper-common.R |only irace-3.3/irace/tests/testthat/test-GenericWrapper4AC.R | 2 irace-3.3/irace/tests/testthat/test-bugs.R | 1 irace-3.3/irace/tests/testthat/test-capping.R | 9 +- irace-3.3/irace/tests/testthat/test-forbidden.R | 1 irace-3.3/irace/tests/testthat/test-maxTime.R | 6 + irace-3.3/irace/tests/testthat/test-mlr.R |only irace-3.3/irace/tests/testthat/test-path.R | 6 - irace-3.3/irace/tests/testthat/test-sann-irace.R | 9 +- irace-3.3/irace/tests/testthat/test-targetRunnerParallel.R | 3 irace-3.3/irace/tests/testthat/test-targeteval.R | 5 + irace-3.3/irace/vignettes/NEWS.txt | 9 ++ irace-3.3/irace/vignettes/irace-package.Rnw | 2 23 files changed, 81 insertions(+), 50 deletions(-)
Title: Interactively Visualize Genetic Mutation Data using a
Lollipop-Diagram
Description: R interface for 'g3-lollipop' JavaScript library.
Visualize genetic mutation data using an interactive lollipop diagram in RStudio or your browser.
Author: Xin Guo [aut, cre]
Maintainer: Xin Guo <g3viz.group@gmail.com>
Diff between g3viz versions 1.1.0 dated 2019-04-21 and 1.1.1 dated 2019-04-26
DESCRIPTION | 6 +++--- MD5 | 13 +++++++------ NEWS.md |only R/readMAF.R | 10 +++++++--- build/vignette.rds |binary inst/doc/chart_themes.html | 32 ++++++++++++++++---------------- inst/doc/introduction.html | 24 ++++++++++++------------ man/readMAF.Rd | 5 ++++- 8 files changed, 49 insertions(+), 41 deletions(-)
Title: DDI with R
Description: Useful functions for various DDI (Data Documentation Initiative) related inputs and outputs.
Author: Adrian Dusa [aut, cre]
Maintainer: Adrian Dusa <dusa.adrian@unibuc.ro>
Diff between DDIwR versions 0.2-0 dated 2014-10-02 and 0.3 dated 2019-04-26
DDIwR-0.2-0/DDIwR/data/test.csv.gz |only DDIwR-0.3/DDIwR/DESCRIPTION | 16 DDIwR-0.3/DDIwR/MD5 | 40 DDIwR-0.3/DDIwR/NAMESPACE | 31 DDIwR-0.3/DDIwR/R/checkType.R |only DDIwR-0.3/DDIwR/R/convert.R |only DDIwR-0.3/DDIwR/R/convertibble.R |only DDIwR-0.3/DDIwR/R/exportDDI.R |only DDIwR-0.3/DDIwR/R/getDecimals.R |only DDIwR-0.3/DDIwR/R/getDelimiter.R | 6 DDIwR-0.3/DDIwR/R/getEnter.R | 13 DDIwR-0.3/DDIwR/R/getFiles.R | 2 DDIwR-0.3/DDIwR/R/getFormat.R |only DDIwR-0.3/DDIwR/R/getMetadata.R | 371 +++++-- DDIwR-0.3/DDIwR/R/getXML.R |only DDIwR-0.3/DDIwR/R/setupfile.R | 1772 ++++++++++++++++++++-------------- DDIwR-0.3/DDIwR/R/tibbleMetadata.R |only DDIwR-0.3/DDIwR/R/treatPath.R | 68 - DDIwR-0.3/DDIwR/R/writeRlist.R |only DDIwR-0.3/DDIwR/data/test.tab.gz |only DDIwR-0.3/DDIwR/inst/ChangeLog | 24 DDIwR-0.3/DDIwR/inst/schemas |only DDIwR-0.3/DDIwR/man/DDIwR-internal.Rd | 13 DDIwR-0.3/DDIwR/man/DDIwR.package.Rd | 15 DDIwR-0.3/DDIwR/man/convert.Rd |only DDIwR-0.3/DDIwR/man/exportDDI.Rd |only DDIwR-0.3/DDIwR/man/getMetadata.Rd | 53 - DDIwR-0.3/DDIwR/man/setupfile.Rd | 242 ++-- 28 files changed, 1621 insertions(+), 1045 deletions(-)
Title: Calculate Textures from Grey-Level Co-Occurrence Matrices
(GLCMs)
Description: Enables calculation of image textures (Haralick 1973)
<doi:10.1109/TSMC.1973.4309314> from grey-level co-occurrence matrices
(GLCMs). Supports processing images that cannot fit in memory.
Author: Alex Zvoleff [aut, cre]
Maintainer: Alex Zvoleff <azvoleff@conservation.org>
Diff between glcm versions 1.6.3 dated 2019-04-15 and 1.6.4 dated 2019-04-26
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- NEWS | 5 +++++ R/glcm-package.R | 2 +- data/test_raster.RData |binary man/test_raster.Rd | 2 +- 6 files changed, 16 insertions(+), 11 deletions(-)
Title: R Interface to Global Biotic Interactions
Description: A programmatic interface to the web service methods
provided by Global Biotic Interactions (GloBI). GloBI provides
access to spatial-temporal species interaction records from
sources all over the world. rglobi provides methods to search
species interactions by location, interaction type, and
taxonomic name. In addition, it supports Cypher, a graph query
language, to allow for executing custom queries on the GloBI
aggregate species interaction data set.
Author: Jorrit Poelen [aut, cre],
Stephen Gosnell [aut],
Sergey Slyusarev [aut]
Maintainer: Jorrit Poelen <jhpoelen@xs4all.nl>
Diff between rglobi versions 0.2.18 dated 2019-03-28 and 0.2.19 dated 2019-04-26
DESCRIPTION | 10 ++++----- MD5 | 8 +++---- NEWS | 9 ++++++++ R/rglobi.R | 55 +++++++++++++++++++++++++++++++++++++++-------------- build/vignette.rds |binary 5 files changed, 59 insertions(+), 23 deletions(-)
Title: Construction of Regular and Irregular Histograms with Different
Options for Automatic Choice of Bins
Description: Automatic construction of regular and irregular histograms as described in Rozenholc/Mildenberger/Gather (2010).
Author: Thoralf Mildenberger [aut, cre],
Yves Rozenholc [aut],
David Zasada [aut]
Maintainer: Thoralf Mildenberger <mild@zhaw.ch>
Diff between histogram versions 0.0-24 dated 2016-10-16 and 0.0-25 dated 2019-04-26
DESCRIPTION | 13 - MD5 | 12 - NEWS | 5 R/histogram.R | 11 - R/histogram.irregular.R | 5 R/histogram.regular.R | 393 ++++++++++++++++++++-------------------- man/histogram.Rd | 464 ++++++++++++++++++++++++------------------------ 7 files changed, 457 insertions(+), 446 deletions(-)
Title: Labelling, Tracking, and Collecting Data from Biological Samples
Description: Tools to generate unique identifiers and printable barcoded labels for sample management.
The creation of unique ID codes and printable PDF files can be initiated by standard commands,
user prompts, or through a GUI addin for R Studio. Both single-level and hierarchical labels can
be created in the command line interactively or non-interactively.
Author: Yihan Wu [aut],
Robert Colautti [aut, cre]
Maintainer: Robert Colautti <robert.colautti@queensu.ca>
Diff between baRcodeR versions 0.1.2 dated 2019-01-10 and 0.1.3 dated 2019-04-26
DESCRIPTION | 8 ++++---- MD5 | 31 ++++++++++++++++--------------- NAMESPACE | 2 ++ NEWS.md | 9 +++++++++ R/createPDF.R | 13 ++++++++----- R/hidden_createPDF.R | 16 +++++++++++++--- R/uniqID_maker_addin.R | 13 +++++++++++++ README.md | 2 +- inst/doc/Using-baRcodeR.R | 11 +++++++++++ inst/doc/Using-baRcodeR.Rmd | 27 +++++++++++++++++++++++++++ inst/doc/Using-baRcodeR.html | 33 +++++++++++++++++++++++++++++++-- inst/rstudio/addins.dcf | 7 ++++++- man/cheatsheet.Rd |only man/create_PDF.Rd | 17 ++++++++++------- man/custom_create_PDF.Rd | 8 +++++++- tests/testthat/test_warnings.R | 2 +- vignettes/Using-baRcodeR.Rmd | 27 +++++++++++++++++++++++++++ 17 files changed, 186 insertions(+), 40 deletions(-)
Title: Yield Per Recruit
Description: An implementation of equilibrium-based yield per recruit methods.
Yield per recruit methods can used to estimate the optimal yield for a fish population.
The yield can be based on the number of fish caught (or harvested) or
biomass caught for all fish or just large (trophy) individuals.
Author: Joe Thorley [aut, cre] (<https://orcid.org/0000-0002-7683-4592>)
Maintainer: Joe Thorley <joe@poissonconsulting.ca>
Diff between ypr versions 0.3.0 dated 2018-11-26 and 0.3.1 dated 2019-04-26
DESCRIPTION | 15 ++++---- MD5 | 68 +++++++++++++++++++-------------------- NAMESPACE | 1 NEWS.md | 5 ++ R/check.R | 3 + R/data.R | 12 +++--- R/internal.R | 16 +++++++-- R/namespace.R | 1 R/population.R | 3 + R/print.R | 6 ++- R/schedule.R | 8 +--- R/sr.R | 8 ++-- R/sysdata.rda |binary R/tabulate.R | 16 ++++----- README.md | 26 ++++++++++---- build/vignette.rds |binary data/adams_bt_03.rda |binary data/chilliwack_bt_05.rda |binary data/kootenay_bt_13.rda |binary data/kootenay_rb.rda |binary data/kootenay_rb_13.rda |binary data/quesnel_bt.rda |binary data/quesnel_lt.rda |binary data/quesnel_rb.rda |binary inst/doc/ypr.Rmd | 27 +++++++++------ inst/doc/ypr.html | 53 +++++++++++++++++++++++------- man/adams_bt_03.Rd | 2 - man/chilliwack_bt_05.Rd | 2 - man/quesnel_lt.Rd | 4 +- man/quesnel_rb.Rd | 4 +- man/ypr_population.Rd | 2 - man/ypr_schedule.Rd | 6 +-- man/ypr_sr.Rd | 6 +-- tests/testthat/test-population.R | 17 +++++++++ vignettes/ypr.Rmd | 27 +++++++++------ 35 files changed, 213 insertions(+), 125 deletions(-)
Title: Integrated Stratigraphy
Description: Includes bases for litholog generation: graphical functions
based on R base graphics, interval management functions and svg importation
functions among others. Also include stereographic projection functions,
and other functions made to deal with large datasets while keeping options
to get into the details of the data.
When using for publication please cite Wouters, S., Da Silva, A.C. Crucifix,
M., Sinnesael, M., Zivanovic, M., Boulvain, F., Devleeschouwer, X., 2019,
Litholog generation with the StratigrapheR package and signal decomposition
for cyclostratigraphic purposes. Geophysical Research Abstracts Vol. 21,
EGU2019-5520, 2019, EGU General Assembly 2019.
<http://hdl.handle.net/2268/234402>
The palaeomagnetism functions are based on:
Tauxe, L., 2010. Essentials of Paleomagnetism. University of California
Press. <https://earthref.org/MagIC/books/Tauxe/Essentials/>;
Allmendinger, R. W., Cardozo, N. C., and Fisher, D., 2013, Structural
Geology Algorithms: Vectors & Tensors: Cambridge, England, Cambridge
University Press, 289 pp.;
Cardozo, N., and Allmendinger, R. W., 2013, Spherical projections
with OSXStereonet: Computers & Geosciences, v. 51, no. 0, p. 193 - 205,
<doi: 10.1016/j.cageo.2012.07.021>.
Author: Sebastien Wouters [aut, cre], Adam D. Smith [ctb]
Maintainer: Sebastien Wouters <sebastien.wouters@doct.uliege.be>
Diff between StratigrapheR versions 0.0.4 dated 2019-04-18 and 0.0.5 dated 2019-04-26
DESCRIPTION | 10 +++++----- MD5 | 10 +++++----- NAMESPACE | 2 ++ R/StratigrapheR.R | 2 +- R/pointsvg.R | 14 ++++++++++++-- man/StratigrapheR.Rd | 2 +- 6 files changed, 26 insertions(+), 14 deletions(-)
Title: Fast Rolling and Expanding Window Linear Regression
Description: Methods for fast rolling and expanding linear regression models. That is, series of linear regression models estimated on either an expanding window of data or a moving window of data. The methods use rank-one updates and downdates of the upper triangular matrix from a QR decomposition (see Dongarra, Moler, Bunch, and Stewart (1979) <doi:10.1137/1.9781611971811>).
Author: Benjamin Christoffersen [cre, aut]
Maintainer: Benjamin Christoffersen <boennecd@gmail.com>
Diff between rollRegres versions 0.1.1 dated 2018-09-12 and 0.1.2 dated 2019-04-26
DESCRIPTION | 6 MD5 | 44 - NAMESPACE | 34 - NEWS.md | 16 R/RcppExports.R | 42 - R/roll_regres.R | 586 ++++++++++++------------ TODO | 2 build/vignette.rds |binary inst/doc/Comparisons.R | 737 +++++++++++++----------------- inst/doc/Comparisons.Rmd | 723 +++++++++++++---------------- inst/doc/Comparisons.html | 923 ++++++++++++++++++-------------------- man/roll_regres.Rd | 166 +++--- man/roll_regres.fit.Rd | 132 ++--- src/BLAS_LINPACK.cpp | 5 src/BLAS_LINPACK.h | 1 src/Makevars | 2 src/arma.h |only src/roll.cpp | 779 +++++++++++++++++++++++--------- tests/testthat.R | 8 tests/testthat/helper.R |only tests/testthat/test_man.R | 60 +- tests/testthat/test_roll_cpp.R | 680 +++++++++++++-------------- tests/testthat/test_roll_regres.R | 386 +++++++-------- vignettes/Comparisons.Rmd | 723 +++++++++++++---------------- 24 files changed, 3103 insertions(+), 2952 deletions(-)
Title: PHATE - Potential of Heat-Diffusion for Affinity-Based
Transition Embedding
Description: PHATE is a tool for visualizing high dimensional single-cell data
with natural progressions or trajectories. PHATE uses a novel conceptual framework
for learning and visualizing the manifold inherent to biological systems in which
smooth transitions mark the progressions of cells from one state to another.
To see how PHATE can be applied to single-cell RNA-seq datasets from hematopoietic
stem cells, human embryonic stem cells, and bone marrow samples, check out our preprint on bioRxiv
at <http://biorxiv.org/content/early/2017/03/24/120378>.
Author: Krishnan Srinivasan [aut],
Scott Gigante [cre] (<https://orcid.org/0000-0002-4544-2764>)
Maintainer: Scott Gigante <scott.gigante@yale.edu>
Diff between phateR versions 0.4.0 dated 2019-04-13 and 0.4.1 dated 2019-04-26
phateR-0.4.0/phateR/inst/desktop.ini |only phateR-0.4.0/phateR/inst/examples/desktop.ini |only phateR-0.4.0/phateR/inst/extdata/desktop.ini |only phateR-0.4.0/phateR/man/figures/desktop.ini |only phateR-0.4.1/phateR/DESCRIPTION | 6 +++--- phateR-0.4.1/phateR/MD5 | 12 ++++-------- phateR-0.4.1/phateR/R/phate.R | 12 +++++++++++- phateR-0.4.1/phateR/README.md | 2 +- phateR-0.4.1/phateR/man/phate.Rd | 5 ++++- 9 files changed, 23 insertions(+), 14 deletions(-)
Title: Manipulate MCMC Samples
Description: Functions and classes to store, manipulate and summarise
Monte Carlo Markov Chain (MCMC) samples.
Author: Joe Thorley [aut, cre] (<https://orcid.org/0000-0002-7683-4592>)
Maintainer: Joe Thorley <joe@poissonconsulting.ca>
Diff between mcmcr versions 0.0.3 dated 2018-11-24 and 0.1.0 dated 2019-04-26
DESCRIPTION | 14 ++-- MD5 | 100 ++++++++++++++++--------------- NAMESPACE | 18 +++++ NEWS.md | 21 ++++-- R/as.R | 1 R/bind-chains.R | 4 - R/bind-dimensions.R | 2 R/bind-iterations.R | 6 - R/bind-parameters.R | 2 R/collapse-chains.R | 5 - R/converged.R | 36 +++++++++-- R/esr.R | 14 +--- R/internal.R | 19 ++++- R/mcmc-aperm.R |only R/mcmc-map.R | 57 +++++++++++++---- R/npdims.R |only R/nterms.R | 10 +++ R/parameters.R | 25 ++++++- R/pdims.R | 29 +++++++- R/rhat.R | 33 ++++++++-- R/subset.R | 17 ++++- R/sysdata.rda |binary README.md | 47 +++++++------- data/mcmcr_example.rda |binary man/converged.Rd | 19 +++++ man/esr.Rd | 14 ++-- man/figures/README-unnamed-chunk-2-1.png |binary man/mcmc_aperm.Rd |only man/mcmc_map.Rd | 21 ++++-- man/npdims.Rd |only man/nterms.Rd | 5 + man/parameters.Rd | 5 + man/pdims.Rd | 19 +++++ man/rhat.Rd | 9 ++ man/subset.Rd | 6 + tests/testthat/test-anyNA.R | 8 +- tests/testthat/test-as.R | 2 tests/testthat/test-bind-chains.R | 2 tests/testthat/test-bind-iterations.R | 2 tests/testthat/test-bind-parameters.R | 2 tests/testthat/test-coef.R | 2 tests/testthat/test-collapse-chains.R | 4 - tests/testthat/test-data-raw.R | 2 tests/testthat/test-esr.R | 10 +-- tests/testthat/test-estimates.R | 6 - tests/testthat/test-mcmc-aperm.R |only tests/testthat/test-mcmc-map.R | 29 ++++++++ tests/testthat/test-nchains.R | 2 tests/testthat/test-niters.R | 2 tests/testthat/test-npdims.R |only tests/testthat/test-parameters.R | 8 ++ tests/testthat/test-pdims.R | 5 + tests/testthat/test-rhat.R | 31 ++++++--- tests/testthat/test-subset.R | 14 +++- 54 files changed, 493 insertions(+), 196 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-03-02 1.2.2.1
2019-01-10 1.2.2
2017-07-19 1.2.1
2017-07-15 1.2.0
2017-03-02 1.0.1
2017-02-24 1.0.0
Title: Accessing Data Stored in 'LaBB-CAT' Instances
Description: 'LaBB-CAT' is a web-based language corpus management
system developed by the New Zealand Institute of Language, Brain
and Behaviour (NZILBB) - see <https://labbcat.canterbury.ac.nz>.
This package defines functions for accessing corpus data in a 'LaBB-CAT'
instance. You must have at least version 20190425.1121 of 'LaBB-CAT'
to use this package.
For more information about 'LaBB-CAT', see
Robert Fromont and Jennifer Hay (2008) <doi:10.3366/E1749503208000142>
or
Robert Fromont (2017) <doi:10.1016/j.csl.2017.01.004>.
Author: Robert Fromont [aut, cre]
Maintainer: Robert Fromont <robert.fromont@canterbury.ac.nz>
Diff between nzilbb.labbcat versions 0.2-1 dated 2019-04-24 and 0.2-2 dated 2019-04-26
nzilbb.labbcat-0.2-1/nzilbb.labbcat/man/getSoundFragment.Rd |only nzilbb.labbcat-0.2-2/nzilbb.labbcat/DESCRIPTION | 10 - nzilbb.labbcat-0.2-2/nzilbb.labbcat/MD5 | 16 +-- nzilbb.labbcat-0.2-2/nzilbb.labbcat/NAMESPACE | 2 nzilbb.labbcat-0.2-2/nzilbb.labbcat/R/nzilbb.labbcat.R | 58 +++++++---- nzilbb.labbcat-0.2-2/nzilbb.labbcat/build/partial.rdb |binary nzilbb.labbcat-0.2-2/nzilbb.labbcat/man/getDictionaries.Rd | 2 nzilbb.labbcat-0.2-2/nzilbb.labbcat/man/getSoundFragments.Rd |only nzilbb.labbcat-0.2-2/nzilbb.labbcat/man/nzilbb.labbcat.Rd | 4 nzilbb.labbcat-0.2-2/nzilbb.labbcat/tests |only 10 files changed, 57 insertions(+), 35 deletions(-)
More information about nzilbb.labbcat at CRAN
Permanent link
Title: Convert Dates to Arbitrary Week Definitions
Description: Which day a week starts depends heavily on the either the local or
professional context. This package is designed to be a lightweight solution
to easily switching between week-based date definitions.
Author: Zhian N. Kamvar [aut, cre]
Maintainer: Zhian N. Kamvar <zkamvar@gmail.com>
Diff between aweek versions 0.2.0 dated 2019-03-08 and 0.2.2 dated 2019-04-26
DESCRIPTION | 8 ++-- MD5 | 22 +++++------ NEWS.md | 10 +++++ R/conversions.R | 1 R/date2week.R | 80 ++++++++++++++++++++++++++-------------- build/vignette.rds |binary inst/doc/introduction.R | 2 - inst/doc/introduction.Rmd | 12 ++++-- inst/doc/introduction.html | 23 +++++++---- man/date2week.Rd | 37 +++++++++++------- tests/testthat/test-date2week.R | 20 ++++++---- vignettes/introduction.Rmd | 12 ++++-- 12 files changed, 145 insertions(+), 82 deletions(-)
Title: Modelling Microbial Populations
Description: Modelling interacting microbial populations - example applications
include human gut microbiota, rumen microbiota and phytoplankton. Solves a
system of ordinary differential equations to simulate microbial growth and
resource uptake over time.
Author: Helen Kettle [aut, cre]
Maintainer: Helen Kettle <Helen.Kettle@bioss.ac.uk>
Diff between microPop versions 1.4 dated 2018-05-22 and 1.4.1 dated 2019-04-26
microPop-1.4.1/microPop/DESCRIPTION | 18 ++- microPop-1.4.1/microPop/MD5 | 47 ++++------ microPop-1.4.1/microPop/R/derivsDefault.R | 9 + microPop-1.4.1/microPop/R/onAttach.R |only microPop-1.4.1/microPop/build/vignette.rds |binary microPop-1.4.1/microPop/data/Bacteroides.RData |binary microPop-1.4.1/microPop/data/resourceSysInfoHuman.RData |binary microPop-1.4.1/microPop/inst/extdata/Bacteroides.csv | 2 microPop-1.4.1/microPop/inst/extdata/resourceSysInfoHuman.csv | 2 microPop-1.4.1/microPop/man/applyTraitTradeOffs.Rd | 4 microPop-1.4.1/microPop/man/combineGrowthLimFuncDefault.Rd | 4 microPop-1.4.1/microPop/man/combinePathsFuncDefault.Rd | 3 microPop-1.4.1/microPop/man/entryRateFuncDefault.Rd | 3 microPop-1.4.1/microPop/man/getStrainPHcorners.Rd | 4 microPop-1.4.1/microPop/man/getValues.Rd | 4 microPop-1.4.1/microPop/man/growthLimFuncDefault.Rd | 4 microPop-1.4.1/microPop/man/makeParamMatrixS.Rd | 4 microPop-1.4.1/microPop/man/massBalanceFuncDefault.Rd | 3 microPop-1.4.1/microPop/man/microPopModel.Rd | 9 + microPop-1.4.1/microPop/man/plotTraitChange.Rd | 4 microPop-1.4.1/microPop/man/productionFuncDefault.Rd | 6 - microPop-1.4.1/microPop/man/quickPlot.Rd | 5 - microPop-1.4.1/microPop/man/removalRateFuncDefault.Rd | 3 microPop-1.4.1/microPop/man/uptakeFuncDefault.Rd | 5 - microPop-1.4/microPop/inst/extdata/microbeSysInfo.csv |only microPop-1.4/microPop/inst/extdata/resourceSysInfo.csv |only 26 files changed, 78 insertions(+), 65 deletions(-)
Title: Read/Write Files in Key-Value-Hierarchy Format
Description: The format KVH is a lightweight format that can be read/written both by humans and machines.
It can be useful in situations where XML or alike formats seem to be an overkill.
We provide an ability to parse KVH files in R pretty fast due to 'Rcpp' use.
Author: Serguei Sokol
Maintainer: Serguei Sokol <sokol@insa-toulouse.fr>
Diff between kvh versions 1.3 dated 2018-06-15 and 1.4 dated 2019-04-26
DESCRIPTION | 11 +- MD5 | 18 ++-- NEWS | 6 + R/RcppExports.R | 2 inst/include/kvh.h | 20 ++-- man/kvh_read.Rd | 6 - src/Makevars | 2 src/RcppExports.cpp | 8 - src/rcpp_kvh.cpp | 191 +++++++++++++++++++++++++++++++++++----------- tests/testthat/test_kvh.R | 43 ++++------ 10 files changed, 205 insertions(+), 102 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-11-24 0.6.5
2012-02-06 0.6.4
2011-10-26 0.6.3
2011-08-30 0.6.2
2011-08-26 0.6.1
2011-08-23 0.6
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-10-01 1.0
Title: Statistical Inference for Systems of Ordinary Differential
Equations using Separable Integral-Matching
Description: Implements statistical inference for systems of ordinary differential equations,
that uses the integral-matching criterion and takes advantage of the separability of parameters,
in order to obtain initial parameter estimates for nonlinear least squares optimization.
Dattner & Yaari (2018) <arXiv:1807.04202>.
Dattner et al. (2017) <doi:10.1098/rsif.2016.0525>.
Dattner & Klaassen (2015) <doi:10.1214/15-EJS1053>.
Author: Itai Dattner [aut],
Rami Yaari [aut, cre]
Maintainer: Rami Yaari <ramiyaari@gmail.com>
Diff between simode versions 1.1.2 dated 2019-01-21 and 1.1.4 dated 2019-04-26
simode-1.1.2/simode/inst/R_pacakge_simode.Rnw |only simode-1.1.4/simode/DESCRIPTION | 8 +- simode-1.1.4/simode/MD5 | 35 +++++----- simode-1.1.4/simode/NAMESPACE | 1 simode-1.1.4/simode/R/calc_loss.R | 38 +++++------ simode-1.1.4/simode/R/simode.R | 10 ++ simode-1.1.4/simode/R/simode_multi.R | 76 ++++++++++------------ simode-1.1.4/simode/R/utils.R | 47 +++++++++++++ simode-1.1.4/simode/demo/LVMCEx.R | 2 simode-1.1.4/simode/inst/R_package_simode.Rnw |only simode-1.1.4/simode/inst/simode-manual.pdf |binary simode-1.1.4/simode/man/confint.profile.simode.Rd | 3 simode-1.1.4/simode/man/plot.list.simode.Rd | 8 +- simode-1.1.4/simode/man/plot.simode.Rd | 4 - simode-1.1.4/simode/man/plot_trace.Rd | 4 - simode-1.1.4/simode/man/simode.Rd | 2 simode-1.1.4/simode/man/simode.control.Rd | 4 - simode-1.1.4/simode/man/solve_ode2.Rd |only simode-1.1.4/simode/man/summary.list.simode.Rd | 4 - simode-1.1.4/simode/man/summary.simode.Rd | 4 - 20 files changed, 152 insertions(+), 98 deletions(-)
Title: Parameter-Free Domain-Agnostic Season Length Detection in Time
Series
Description: Spectral and Average Autocorrelation Zero Distance Density
('sazed') is a method for estimating the season length of a
seasonal time series. 'sazed' is aimed at practitioners, as it employs only
domain-agnostic preprocessing and does not depend on parameter tuning or
empirical constants. The computation of 'sazed' relies on the efficient
autocorrelation computation methods suggested by Thibauld Nion (2012, URL:
<http://www.tibonihoo.net/literate_musing/autocorrelations.html>) and by
Bob Carpenter (2012, URL:
<https://lingpipe-blog.com/2012/06/08/autocorrelation-fft-kiss-eigen/>).
Author: Maximilian Toller [aut],
Tiago Santos [aut, cre],
Roman Kern [aut]
Maintainer: Tiago Santos <teixeiradossantos@tugraz.at>
Diff between sazedR versions 1.0.0 dated 2018-09-30 and 2.0.0 dated 2019-04-26
DESCRIPTION | 12 ++--- MD5 | 15 ++++-- NAMESPACE | 2 NEWS.md |only R/fastAcf.R | 14 +++++- R/sazed.R | 123 ++++++++++++++++++++++++++++++++++++++++--------------- README.md | 2 man/sazed.Rd | 19 +------- man/sazed.maj.Rd |only man/sazedR.Rd |only 10 files changed, 126 insertions(+), 61 deletions(-)
Title: Variable Length Markov Chains ('VLMC') Models
Description: Functions, Classes & Methods for estimation, prediction, and
simulation (bootstrap) of Variable Length Markov Chain ('VLMC') Models.
Author: Martin Maechler <maechler@stat.math.ethz.ch>
Maintainer: Martin Maechler <maechler@stat.math.ethz.ch>
Diff between VLMC versions 1.4-2 dated 2018-10-03 and 1.4-3 dated 2019-04-26
ChangeLog | 7 +++++++ DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- tests/iid-cutoff.R | 2 +- tests/iid-cutoff.Rout.save | 20 ++++++++++---------- 5 files changed, 26 insertions(+), 19 deletions(-)
Title: Diff, Patch and Merge for Data.frames
Description: Diff, patch and merge for data frames. Document changes in data
sets and use them to apply patches. Changes to data can be made visible by using
render_diff. The V8 package is used to wrap the 'daff.js' JavaScript library
which is included in the package.
Author: Paul Fitzpatrick [aut] (JavaScript original,
http://paulfitz.github.io/daff/),
Edwin de Jonge [aut, cre] (R wrapper,
<https://orcid.org/0000-0002-6580-4718>),
Gregory R. Warnes [aut]
Maintainer: Edwin de Jonge <edwindjonge@gmail.com>
Diff between daff versions 0.3.0 dated 2017-05-10 and 0.3.4 dated 2019-04-26
DESCRIPTION | 13 MD5 | 50 - NAMESPACE | 1 NEWS.md | 32 R/TableView.R | 35 R/diff-data.R | 41 - R/merge-data.R | 10 R/patch-data.R | 2 R/read-diff.R | 10 R/render-diff.R | 98 +- R/summary.R | 15 README.md | 2 inst/html_templates |only inst/js/daff.js | 21 inst/js/util.js | 2 inst/useR2017 |only man/diff_data.Rd | 10 man/readwrite.Rd | 2 man/render_diff.Rd | 15 tests/more_tests.R | 41 - tests/more_tests.Rds |only tests/more_tests.Rout.save | 1648 ++++++++++++++++++++++------------------- tests/testthat/test-print.R |only tests/testthat/testdiff-data.R | 10 24 files changed, 1187 insertions(+), 871 deletions(-)
Title: Prediction Rule Ensembles
Description: Derives prediction rule ensembles (PREs). Largely follows the
procedure for deriving PREs as described in Friedman & Popescu (2008;
<DOI:10.1214/07-AOAS148>), with adjustments and improvements. The
main function pre() derives prediction rule ensembles consisting of
rules and/or linear terms for continuous, binary, count, multinomial,
and multivariate continuous responses. Function gpe() derives
generalized prediction ensembles, consisting of rules, hinge and linear
functions of the predictor variables.
Author: Marjolein Fokkema [aut, cre],
Benjamin Christoffersen [aut]
Maintainer: Marjolein Fokkema <m.fokkema@fsw.leidenuniv.nl>
Diff between pre versions 0.7.0 dated 2019-04-01 and 0.7.1 dated 2019-04-26
DESCRIPTION | 6 MD5 | 14 - NEWS | 13 + R/caret_pre_model.R | 109 +++++----- R/pre.R | 6 man/caret_pre_model.Rd | 27 +- tests/testthat/previous_results/airquality_w_bsnullinteract.RDS |binary tests/testthat/test_pre_misc.R | 5 8 files changed, 108 insertions(+), 72 deletions(-)
Title: One-Way Tests in Independent Groups Designs
Description: Performs one-way tests in independent groups designs; one-way analysis of variance (ANOVA), Welch's heteroscedastic F test, Welch's heteroscedastic F test with trimmed means and Winsorized variances, Brown-Forsythe test, Alexander-Govern test, James second order test, Kruskal-Wallis test, Scott-Smith test, Box F test and Johansen F test. The package performs pairwise comparisons and graphical approaches. Also, the package includes Student's t test, Welch's t test and Mann-Whitney U test for two samples. Moreover, it assesses variance homogeneity and normality of data in each group via tests and plots (Dag et al., 2018, <https://journal.r-project.org/archive/2018/RJ-2018-022/RJ-2018-022.pdf>).
Author: Osman Dag [aut, cre], Anil Dolgun [aut], N. Meric Konar [aut]
Maintainer: Osman Dag <osman.dag@outlook.com>
Diff between onewaytests versions 2.1 dated 2019-04-05 and 2.2 dated 2019-04-26
DESCRIPTION | 16 ++++++++-------- MD5 | 40 +++++++++++++++++++++++++--------------- NAMESPACE | 6 ++---- R/ag.test.R | 6 +++--- R/aov.test.R | 6 +++--- R/bf.test.R | 6 +++--- R/box.test.R |only R/homog.test.R | 10 +++++----- R/james.test.R | 6 +++--- R/johansen.test.R |only R/kw.test.R | 6 +++--- R/mw.test.R |only R/nor.test.R | 2 +- R/paircomp.R | 6 ++++-- R/ss.test.R | 6 +++--- R/st.test.R |only R/welch.test.R | 6 +++--- R/wt.test.R |only man/aov.test.Rd | 4 ++-- man/bf.test.Rd | 2 -- man/box.test.Rd |only man/johansen.test.Rd |only man/mw.test.Rd |only man/onewaytests.Rd | 2 +- man/st.test.Rd |only man/wt.test.Rd |only 26 files changed, 69 insertions(+), 61 deletions(-)
Title: Approximate Bayesian Inference via Sparse Grid Quadrature
Evaluation (BISQuE) for Hierarchical Models
Description: Implementation of the 'bisque' strategy for approximate Bayesian posterior inference. See Hewitt and Hoeting (2019) <arXiv:1904.07270> for complete details. 'bisque' combines conditioning with sparse grid quadrature rules to approximate marginal posterior quantities of hierarchical Bayesian models. The resulting approximations are computationally efficient for many hierarchical Bayesian models. The 'bisque' package allows approximate posterior inference for custom models; users only need to specify the conditional densities required for the approximation.
Author: Joshua Hewitt
Maintainer: Joshua Hewitt <joshua.hewitt@colostate.edu>
Diff between bisque versions 1.0.0 dated 2019-04-24 and 1.0.1 dated 2019-04-26
DESCRIPTION | 8 ++++---- MD5 | 5 +++-- NEWS.md |only src/sKrig.cpp | 46 ++++++++++++++++++++++++---------------------- 4 files changed, 31 insertions(+), 28 deletions(-)
Title: Structural Bayesian Vector Autoregression Models
Description: Provides a function for estimating the parameters of Structural Bayesian Vector Autoregression models with the method developed by Baumeister and Hamilton (2015) <doi:10.3982/ECTA12356>, Baumeister and Hamilton (2017) <doi:10.3386/w24167>, and Baumeister and Hamilton (2018) <doi:10.1016/j.jmoneco.2018.06.005>. Functions for plotting impulse responses, historical decompositions, and posterior distributions of model parameters are also provided.
Author: Paul Richardson
Maintainer: Paul Richardson <p.richardson.54391@gmail.com>
Diff between BHSBVAR versions 1.0.2 dated 2019-03-20 and 1.0.3 dated 2019-04-26
DESCRIPTION | 10 +++--- MD5 | 32 ++++++++++---------- R/BHSBVAR.R | 63 ++++++++++++++++------------------------- R/USLMData.R | 2 - inst/doc/BHSBVAR.Rnw | 12 +++---- inst/doc/BHSBVAR.pdf |binary man/BH_SBVAR.Rd | 16 +++++----- man/Dist_Plots.Rd | 4 +- man/HD_Plots.Rd | 6 +-- man/IRF_Plots.Rd | 6 +-- man/USLMData.Rd | 2 - src/BHSBVAR.cpp | 32 ++++++++++---------- vignettes/BHSBVAR.Rnw | 12 +++---- vignettes/fig/Dist_plots-1.pdf |binary vignettes/fig/HD_plots-1.pdf |binary vignettes/fig/IRF_plots-1.pdf |binary vignettes/fig/Model-1.pdf |binary 17 files changed, 92 insertions(+), 105 deletions(-)
Title: Choose Univariate Class Intervals
Description: Selected commonly used methods for choosing univariate class intervals for mapping or other graphics purposes.
Author: Roger Bivand [aut, cre] (<https://orcid.org/0000-0003-2392-6140>),
Hisaji Ono [ctb],
Richard Dunlap [ctb],
Matthieu Stigler [ctb]
Maintainer: Roger Bivand <Roger.Bivand@nhh.no>
Diff between classInt versions 0.3-1 dated 2018-12-18 and 0.3-3 dated 2019-04-26
DESCRIPTION | 12 ++++----- MD5 | 12 ++++----- NAMESPACE | 1 R/classInt.R | 39 +++++++++++++++++++++++++++++-- man/classIntervals.Rd | 49 ++++++++++++++++++++++++++------------- tests/test_Unique.R | 13 ++++++---- tests/test_Unique.Rout.save | 54 ++++++++++++++++++++------------------------ 7 files changed, 115 insertions(+), 65 deletions(-)
Title: Full Pattern Summation of X-Ray Powder Diffraction Data
Description: Full pattern summation of X-ray powder diffraction data as
described in Chipera and Bish (2002) <doi:10.1107/S0021889802017405>.
Derives quantitative estimates of crystalline and amorphous phase
concentrations in complex mixtures.
Author: Benjamin Butler [aut, cre],
Stephen Hillier [aut],
Dylan Beaudette [ctb],
Dennis Eberl [ctb]
Maintainer: Benjamin Butler <benjamin.butler@hutton.ac.uk>
Diff between powdR versions 0.2.0 dated 2018-11-15 and 1.0.0 dated 2019-04-26
DESCRIPTION | 17 MD5 | 85 ++-- NAMESPACE | 2 NEWS.md | 49 ++ R/afps.R | 573 ++++++++++++++++++++------- R/alignment.R | 18 R/bkg.R | 8 R/create_library.R | 53 +- R/data.R | 63 ++- R/fps.R | 520 ++++++++++++++++++++----- R/harmonise.R |only R/lod.R | 261 +++++++----- R/plotting.R | 425 +++++++++++--------- R/qminerals.R |only R/remove_amorphous.R | 72 +++ R/remove_neg.R | 68 +++ R/remove_trace.R |only R/shift.R | 39 + R/subset.R |only R/summarise_mineralogy.R |only README.md | 132 ++++-- build/vignette.rds |binary data/minerals.rda |binary data/minerals_phases.rda |binary data/minerals_xrd.rda |binary data/rockjock.rda |only data/rockjock_mixtures.rda |only inst/doc/powdR_vignette.R | 219 +++++++--- inst/doc/powdR_vignette.Rmd | 306 +++++++++++--- inst/doc/powdR_vignette.html | 804 ++++++++++++++++++++++++++++----------- inst/shiny/Global.R | 2 inst/shiny/server.R | 742 +++++++++++++++++++++++++++++++---- inst/shiny/ui.R | 425 +++++++++++++++----- man/afps.Rd | 61 ++ man/afps.powdRlib.Rd | 100 +++- man/bkg.Rd | 8 man/figures/README-example-1.png |binary man/fps.Rd | 46 ++ man/fps.powdRlib.Rd | 79 +++ man/minerals.Rd | 5 man/plot.powdRafps.Rd | 28 - man/plot.powdRfps.Rd | 14 man/plot.powdRlib.Rd | 12 man/rockjock.Rd |only man/rockjock_mixtures.Rd |only man/soils.Rd | 2 man/subset.powdRlib.Rd |only man/summarise_mineralogy.Rd |only vignettes/powdR_vignette.Rmd | 306 +++++++++++--- 49 files changed, 4160 insertions(+), 1384 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-04-11 0.9.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-04-10 0.1.4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-04-13 0.0.4
2019-04-11 0.0.3
Title: Tools for Multiple Imputation of Missing Data
Description: Tools to perform analyses and combine results from
multiple-imputation datasets.
Author: Thomas Lumley
Maintainer: Thomas Lumley <t.lumley@auckland.ac.nz>
Diff between mitools versions 2.3 dated 2014-09-20 and 2.4 dated 2019-04-26
DESCRIPTION | 14 +++++++------- MD5 | 20 ++++++++++++-------- NAMESPACE | 6 +++++- NEWS | 6 ++++++ R/MI.R | 13 +++++++------ R/PV.R |only R/update.R | 4 ++-- build/vignette.rds |binary data/pisamaths.rda |only data/smi.rda |binary inst/doc/smi.pdf |binary man/PV.Rd |only man/pisamaths.Rd |only 13 files changed, 39 insertions(+), 24 deletions(-)
Title: Less Code, More Results
Description: Each function accomplishes the work of several or more standard R functions. For example, two function calls, Read() and CountAll(), read the data and generate summary statistics for all variables in the data frame, plus histograms and bar charts as appropriate. Other functions provide for descriptive statistics, a comprehensive regression analysis, analysis of variance and t-test, plotting including the introduced here Violin/Box/Scatter plot for a numerical variable, bar chart, histogram, box plot, density curves, calibrated power curve, reading multiple data formats with the same function call, variable labels, color themes, Trellis graphics and a built-in help system. Also includes a confirmatory factor analysis of multiple indicator measurement models, pedagogical routines for data simulation such as for the Central Limit Theorem, and generation and rendering of R markdown instructions for interpretative output.
Author: David W. Gerbing, The School of Business, Portland State University
Maintainer: David W. Gerbing <gerbing@pdx.edu>
Diff between lessR versions 3.8.2 dated 2019-03-28 and 3.8.4 dated 2019-04-26
lessR-3.8.2/lessR/R/model.brief.R |only lessR-3.8.2/lessR/R/wrt.r.R |only lessR-3.8.2/lessR/R/wrt.x.R |only lessR-3.8.2/lessR/man/prob.norm.Rd |only lessR-3.8.2/lessR/man/prob.tcut.Rd |only lessR-3.8.2/lessR/man/prob.znorm.Rd |only lessR-3.8.4/lessR/DESCRIPTION | 11 lessR-3.8.4/lessR/MD5 | 329 ++--- lessR-3.8.4/lessR/NAMESPACE | 37 lessR-3.8.4/lessR/NEWS | 41 lessR-3.8.4/lessR/R/ANOVA.R | 76 - lessR-3.8.4/lessR/R/ANOVAz1.R | 62 - lessR-3.8.4/lessR/R/ANOVAz2.R | 48 lessR-3.8.4/lessR/R/BarChart.R | 250 ++-- lessR-3.8.4/lessR/R/BoxPlot.R | 12 lessR-3.8.4/lessR/R/Correlation.R | 28 lessR-3.8.4/lessR/R/CountAll.R | 4 lessR-3.8.4/lessR/R/Density.R | 105 + lessR-3.8.4/lessR/R/Help.R | 50 lessR-3.8.4/lessR/R/Histogram.R | 138 +- lessR-3.8.4/lessR/R/LineChart.R | 82 - lessR-3.8.4/lessR/R/Logit.R | 107 + lessR-3.8.4/lessR/R/Model.R | 56 lessR-3.8.4/lessR/R/Nest.R | 47 lessR-3.8.4/lessR/R/PieChart.R | 120 +- lessR-3.8.4/lessR/R/Plot.R | 622 +++++----- lessR-3.8.4/lessR/R/Read.R | 84 - lessR-3.8.4/lessR/R/Read2.R | 2 lessR-3.8.4/lessR/R/Recode.R | 49 lessR-3.8.4/lessR/R/Regression.R | 215 ++- lessR-3.8.4/lessR/R/ScatterPlot.R | 2 lessR-3.8.4/lessR/R/Subset.R | 8 lessR-3.8.4/lessR/R/SummaryStats.R | 31 lessR-3.8.4/lessR/R/ViolinPlot.R | 10 lessR-3.8.4/lessR/R/av.Rmd.R | 4 lessR-3.8.4/lessR/R/av_brief.R |only lessR-3.8.4/lessR/R/bar.zlattice.R | 228 +-- lessR-3.8.4/lessR/R/bc.data.frame.R | 50 lessR-3.8.4/lessR/R/bc.zmain.R | 408 +++---- lessR-3.8.4/lessR/R/bx.zstats.R | 40 lessR-3.8.4/lessR/R/cfa.R | 2 lessR-3.8.4/lessR/R/corCFA.R | 77 - 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lessR-3.8.4/lessR/R/plt.zadd.R | 50 lessR-3.8.4/lessR/R/plt.zbad.R | 20 lessR-3.8.4/lessR/R/plt.zlattice.R | 372 +++--- lessR-3.8.4/lessR/R/plt.zlegend.R | 24 lessR-3.8.4/lessR/R/plt.zmain.R | 481 ++++---- lessR-3.8.4/lessR/R/plt.zmat.R | 22 lessR-3.8.4/lessR/R/plt.zpanel.R | 28 lessR-3.8.4/lessR/R/plt.ztxt.R | 100 - lessR-3.8.4/lessR/R/prob.norm.R | 93 - lessR-3.8.4/lessR/R/prob.tcut.R | 126 -- lessR-3.8.4/lessR/R/prob.znorm.R | 86 - lessR-3.8.4/lessR/R/prob_norm.R |only lessR-3.8.4/lessR/R/prob_tcut.R |only lessR-3.8.4/lessR/R/prob_znorm.R |only lessR-3.8.4/lessR/R/rd.R | 2 lessR-3.8.4/lessR/R/rd.brief.R | 2 lessR-3.8.4/lessR/R/rd_brief.R |only lessR-3.8.4/lessR/R/rec.zmain.R | 18 lessR-3.8.4/lessR/R/reg.R | 2 lessR-3.8.4/lessR/R/reg.brief.R | 2 lessR-3.8.4/lessR/R/reg.z1anvBasic.R | 28 lessR-3.8.4/lessR/R/reg.z1bckBasic.R | 4 lessR-3.8.4/lessR/R/reg.z1fitBasic.R | 8 lessR-3.8.4/lessR/R/reg.z1modelBasic.R | 14 lessR-3.8.4/lessR/R/reg.z2Relations.R | 4 lessR-3.8.4/lessR/R/reg.z3dnResidual.R | 14 lessR-3.8.4/lessR/R/reg.z3resfitResidual.R | 52 lessR-3.8.4/lessR/R/reg.z3txtResidual.R | 38 lessR-3.8.4/lessR/R/reg.z4Pred.R | 38 lessR-3.8.4/lessR/R/reg.z5Plot.R | 72 - lessR-3.8.4/lessR/R/reg.zRmd.R | 54 lessR-3.8.4/lessR/R/regPlot.R | 18 lessR-3.8.4/lessR/R/reg_brief.R |only lessR-3.8.4/lessR/R/scales.R | 6 lessR-3.8.4/lessR/R/simCImean.R | 70 - lessR-3.8.4/lessR/R/simCLT.R | 54 lessR-3.8.4/lessR/R/simFlips.R | 35 lessR-3.8.4/lessR/R/simMeans.R | 70 - lessR-3.8.4/lessR/R/ss.zdata.frame.R | 12 lessR-3.8.4/lessR/R/ss.zfactor.R | 20 lessR-3.8.4/lessR/R/ss.znumeric.R | 66 - lessR-3.8.4/lessR/R/ss.zreal.R | 16 lessR-3.8.4/lessR/R/ss_brief.R |only lessR-3.8.4/lessR/R/style.R | 1664 ++++++++++++++--------------- lessR-3.8.4/lessR/R/style.zshow.R | 312 ++--- lessR-3.8.4/lessR/R/tt.brief.R | 2 lessR-3.8.4/lessR/R/tt.z1graph.R | 32 lessR-3.8.4/lessR/R/tt.z1group.R | 92 - lessR-3.8.4/lessR/R/tt.z2graph.R | 48 lessR-3.8.4/lessR/R/tt.z2group.R | 120 +- lessR-3.8.4/lessR/R/tt.zformula.R | 4 lessR-3.8.4/lessR/R/tt_brief.R |only lessR-3.8.4/lessR/R/ttest.R | 101 + lessR-3.8.4/lessR/R/ttestPower.R | 19 lessR-3.8.4/lessR/R/ttp2zgraph.R | 18 lessR-3.8.4/lessR/R/wrt_r.R |only lessR-3.8.4/lessR/R/wrt_x.R |only lessR-3.8.4/lessR/R/xP.R | 8 lessR-3.8.4/lessR/R/zzz.R | 644 +++++------ lessR-3.8.4/lessR/man/ANOVA.Rd | 32 lessR-3.8.4/lessR/man/BarChart.Rd | 216 +-- lessR-3.8.4/lessR/man/Correlation.Rd | 30 lessR-3.8.4/lessR/man/Density.Rd | 84 - lessR-3.8.4/lessR/man/Histogram.Rd | 114 - lessR-3.8.4/lessR/man/LineChart.Rd | 82 - lessR-3.8.4/lessR/man/Logit.Rd | 68 - lessR-3.8.4/lessR/man/Merge.Rd | 4 lessR-3.8.4/lessR/man/Model.Rd | 10 lessR-3.8.4/lessR/man/Nest.Rd | 16 lessR-3.8.4/lessR/man/PieChart.Rd | 78 - lessR-3.8.4/lessR/man/Plot.Rd | 410 +++---- lessR-3.8.4/lessR/man/Read.Rd | 46 lessR-3.8.4/lessR/man/Recode.Rd | 28 lessR-3.8.4/lessR/man/Regression.Rd | 116 +- lessR-3.8.4/lessR/man/Sort.Rd | 6 lessR-3.8.4/lessR/man/Subset.Rd | 6 lessR-3.8.4/lessR/man/SummaryStats.Rd | 26 lessR-3.8.4/lessR/man/Transform.Rd | 6 lessR-3.8.4/lessR/man/VariableLabels.Rd | 2 lessR-3.8.4/lessR/man/Write.Rd | 16 lessR-3.8.4/lessR/man/corCFA.Rd | 30 lessR-3.8.4/lessR/man/corEFA.Rd | 14 lessR-3.8.4/lessR/man/corProp.Rd | 10 lessR-3.8.4/lessR/man/corRead.Rd | 2 lessR-3.8.4/lessR/man/corReflect.Rd | 10 lessR-3.8.4/lessR/man/corReorder.Rd | 30 lessR-3.8.4/lessR/man/corScree.Rd | 8 lessR-3.8.4/lessR/man/details.Rd | 20 lessR-3.8.4/lessR/man/factors.Rd | 14 lessR-3.8.4/lessR/man/getColors.Rd | 56 lessR-3.8.4/lessR/man/label.Rd | 2 lessR-3.8.4/lessR/man/print_out.Rd | 4 lessR-3.8.4/lessR/man/print_outall.Rd | 6 lessR-3.8.4/lessR/man/prob_norm.Rd |only lessR-3.8.4/lessR/man/prob_tcut.Rd |only lessR-3.8.4/lessR/man/prob_znorm.Rd |only lessR-3.8.4/lessR/man/regPlot.Rd | 24 lessR-3.8.4/lessR/man/showColors.Rd | 2 lessR-3.8.4/lessR/man/simCImean.Rd | 22 lessR-3.8.4/lessR/man/simCLT.Rd | 8 lessR-3.8.4/lessR/man/simFlips.Rd | 12 lessR-3.8.4/lessR/man/simMeans.Rd | 24 lessR-3.8.4/lessR/man/style.Rd | 380 +++--- lessR-3.8.4/lessR/man/ttest.Rd | 46 lessR-3.8.4/lessR/man/ttestPower.Rd | 6 176 files changed, 6275 insertions(+), 5957 deletions(-)