Sun, 26 May 2019

Package ows4R updated to version 0.1-1 with previous version 0.1-0 dated 2018-08-31

Title: Interface to OGC Web-Services (OWS)
Description: Provides an Interface to Web-Services defined as standards by the Open Geospatial Consortium (OGC), including Web Feature Service (WFS) for vector data, Catalogue Service (CSW) for ISO/OGC metadata and associated standards such as the common web-service specification (OWS) and OGC Filter Encoding. The long-term purpose is to add support for additional OGC service standards such as Web Coverage Service (WCS) and Web Processing Service (WPS).
Author: Emmanuel Blondel [aut, cre] (<https://orcid.org/0000-0002-5870-5762>), Norbert Billet [ctb]
Maintainer: Emmanuel Blondel <emmanuel.blondel1@gmail.com>

Diff between ows4R versions 0.1-0 dated 2018-08-31 and 0.1-1 dated 2019-05-26

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Package OpenMx updated to version 2.13.2 with previous version 2.13.1 dated 2019-05-25

Title: Extended Structural Equation Modelling
Description: Create structural equation models that can be manipulated programmatically. Models may be specified with matrices or paths (LISREL or RAM) Example models include confirmatory factor, multiple group, mixture distribution, categorical threshold, modern test theory, differential Fit functions include full information maximum likelihood, maximum likelihood, and weighted least squares. equations, state space, and many others. Support and advanced package binaries available at <http://openmx.ssri.psu.edu>. The software is described in Neale, Hunter, Pritikin, Zahery, Brick, Kirkpatrick, Estabrook, Bates, Maes, & Boker (2016) <doi:10.1007/s11336-014-9435-8>.
Author: Steven M. Boker [aut], Michael C. Neale [aut], Hermine H. Maes [aut], Michael J. Wilde [ctb], Michael Spiegel [aut], Timothy R. Brick [aut], Ryne Estabrook [aut], Timothy C. Bates [aut], Paras Mehta [ctb], Timo von Oertzen [ctb], Ross J. Gore [aut], Michael D. Hunter [aut], Daniel C. Hackett [ctb], Julian Karch [ctb], Andreas M. Brandmaier [ctb], Joshua N. Pritikin [aut, cre], Mahsa Zahery [aut], Robert M. Kirkpatrick [aut], Yang Wang [ctb], Charles Driver [ctb], Massachusetts Institute of Technology [cph], S. G. Johnson [cph], Association for Computing Machinery [cph], Dieter Kraft [cph], Stefan Wilhelm [cph], Sarah Medland [cph], Carl F. Falk [cph], Matt Keller [cph], Manjunath B G [cph], The Regents of the University of California [cph], Lester Ingber [cph], Wong Shao Voon [cph], Juan Palacios [cph], Jiang Yang [cph], Gavin Band [cph], Yann Collet [cph], Facebook, Inc. [cph], Yuta Mori [cph], Shaun Purcell [cph], Christopher Chang [cph]
Maintainer: Joshua N. Pritikin <jpritikin@pobox.com>

Diff between OpenMx versions 2.13.1 dated 2019-05-25 and 2.13.2 dated 2019-05-26

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Package geonapi updated to version 0.2-1 with previous version 0.2-0 dated 2018-08-14

Title: 'GeoNetwork' API R Interface
Description: Provides an R interface to the 'GeoNetwork' API (<https://geonetwork-opensource.org/#api>) allowing to upload and publish metadata in a 'GeoNetwork' web-application and exposte it to OGC CSW.
Author: Emmanuel Blondel [aut, cre] (<https://orcid.org/0000-0002-5870-5762>)
Maintainer: Emmanuel Blondel <emmanuel.blondel1@gmail.com>

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Package evtree updated to version 1.0-8 with previous version 1.0-7 dated 2018-05-23

Title: Evolutionary Learning of Globally Optimal Trees
Description: Commonly used classification and regression tree methods like the CART algorithm are recursive partitioning methods that build the model in a forward stepwise search. Although this approach is known to be an efficient heuristic, the results of recursive tree methods are only locally optimal, as splits are chosen to maximize homogeneity at the next step only. An alternative way to search over the parameter space of trees is to use global optimization methods like evolutionary algorithms. The 'evtree' package implements an evolutionary algorithm for learning globally optimal classification and regression trees in R. CPU and memory-intensive tasks are fully computed in C++ while the 'partykit' package is leveraged to represent the resulting trees in R, providing unified infrastructure for summaries, visualizations, and predictions.
Author: Thomas Grubinger [aut, cre], Achim Zeileis [aut] (<https://orcid.org/0000-0003-0918-3766>), Karl-Peter Pfeiffer [aut]
Maintainer: Thomas Grubinger <ThomasGrubinger@gmail.com>

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Package SimInf updated to version 6.3.0 with previous version 6.2.0 dated 2018-11-20

Title: A Framework for Data-Driven Stochastic Disease Spread Simulations
Description: Provides an efficient and very flexible framework to conduct data-driven epidemiological modeling in realistic large scale disease spread simulations. The framework integrates infection dynamics in subpopulations as continuous-time Markov chains using the Gillespie stochastic simulation algorithm and incorporates available data such as births, deaths and movements as scheduled events at predefined time-points. Using C code for the numerical solvers and 'OpenMP' (if available) to divide work over multiple processors ensures high performance when simulating a sample outcome. One of our design goals was to make the package extendable and enable usage of the numerical solvers from other R extension packages in order to facilitate complex epidemiological research. The package contains template models and can be extended with user-defined models.
Author: Stefan Widgren [aut, cre] (<https://orcid.org/0000-0001-5745-2284>), Robin Eriksson [aut] (<https://orcid.org/0000-0002-4291-712X>), Stefan Engblom [aut] (<https://orcid.org/0000-0002-3614-1732>), Pavol Bauer [aut] (<https://orcid.org/0000-0003-4328-7171>), Attractive Chaos [cph] (Author of 'kvec.h', a generic dynamic array)
Maintainer: Stefan Widgren <stefan.widgren@gmail.com>

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New package R2MLwiN with initial version 0.8-6
Package: R2MLwiN
Version: 0.8-6
Date: 2019-05-25
Title: Running 'MLwiN' from Within R
Authors@R: c(person("Zhengzheng", "Zhang", role = c("aut", "cre"),email = "zhengzheng236@gmail.com"), person("Chris", "Charlton", role = "aut"), person("Richard", "Parker", role = "aut"), person("George", "Leckie", role = "aut"), person("William", "Browne", role = "aut"))
Depends: R (>= 2.15.0), stats, stats4, methods, lattice, memisc, coda (>= 0.16-1)
Imports: Matrix, foreign (>= 0.8-46), R2WinBUGS, digest (>= 0.6.5), texreg, foreach, parallel, doParallel
Suggests: doBy, car, lmtest, mitools
Enhances: reshape
Description: An R command interface to the 'MLwiN' multilevel modelling software package.
License: GPL (>= 2)
URL: http://www.bristol.ac.uk/cmm/software/r2mlwin/,https://r-forge.r-project.org/projects/r2mlwin/,http://www.bristol.ac.uk/cmm/software/mlwin/
SystemRequirements: MLwiN, (OpenBUGS, WinBUGS optional)
Encoding: UTF-8
RoxygenNote: 6.1.1
NeedsCompilation: no
Packaged: 2019-05-26 03:07:59 UTC; Zhengzheng
Author: Zhengzheng Zhang [aut, cre], Chris Charlton [aut], Richard Parker [aut], George Leckie [aut], William Browne [aut]
Maintainer: Zhengzheng Zhang <zhengzheng236@gmail.com>
Repository: CRAN
Date/Publication: 2019-05-26 15:10:21 UTC

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Package labelled updated to version 2.2.1 with previous version 2.2.0 dated 2019-04-16

Title: Manipulating Labelled Data
Description: Work with labelled data imported from 'SPSS' or 'Stata' with 'haven' or 'foreign'. This package provides useful functions to deal with "haven_labelled" and "haven_labelled_spss" classes introduced by 'haven' package.
Author: Joseph Larmarange [aut, cre] (<https://orcid.org/0000-0001-7097-700X>), Daniel Ludecke [ctb], Hadley Wickham [ctb], Bojanowski Michal [ctb], Briatte François [ctb]
Maintainer: Joseph Larmarange <joseph@larmarange.net>

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Package ggPMX updated to version 0.9.3 with previous version 0.9.2 dated 2019-05-17

Title: 'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME Models
Description: At Novartis, we aimed at standardizing the set of diagnostic plots used for modeling activities in order to reduce the overall effort required for generating such plots. For this, we developed a guidance that proposes an adequate set of diagnostics and a toolbox, called 'ggPMX' to execute them. 'ggPMX' is a toolbox that can generate all diagnostic plots at a quality sufficient for publication and submissions using few lines of code.
Author: Amine Gassem [cre, aut], Bruno Bieth [aut], Irina Baltcheva [aut], Thomas Dumortier [aut], Christian Bartels [aut], Souvik Bhattacharya [aut], Inga Ludwig [aut], Ines Paule [aut], Didier Renard [aut], Qing Xi Ooi [ctr], Novartis Pharma AG [cph]
Maintainer: Amine Gassem <contact@ag-study.com>

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Package geometa updated to version 0.5-0 with previous version 0.4-0 dated 2018-12-17

Title: Tools for Reading and Writing ISO/OGC Geographic Metadata
Description: Provides facilities to handle reading and writing of geographic metadata defined with OGC/ISO 19115, 11119 and 19110 geographic information metadata standards, and encoded using the ISO 19139 (XML) standard. It includes also a facility to check the validity of ISO 19139 XML encoded metadata.
Author: Emmanuel Blondel [aut, cre] (<https://orcid.org/0000-0002-5870-5762>)
Maintainer: Emmanuel Blondel <emmanuel.blondel1@gmail.com>

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 geometa-0.4-0/geometa/R/ISORelativeInternalPositionalAccuracy.R              |only
 geometa-0.4-0/geometa/tests/testthat/test_ISODomainConsistency.R             |only
 geometa-0.4-0/geometa/tests/testthat/test_ISOPositionalAccuracy.R            |only
 geometa-0.5-0/geometa/DESCRIPTION                                            |   12 
 geometa-0.5-0/geometa/MD5                                                    |  760 +++++----
 geometa-0.5-0/geometa/NAMESPACE                                              |   63 
 geometa-0.5-0/geometa/R/GMLTimeInstant.R                                     |   10 
 geometa-0.5-0/geometa/R/GMLTimePeriod.R                                      |   79 -
 geometa-0.5-0/geometa/R/INSPIREMetadataValidator.R                           |only
 geometa-0.5-0/geometa/R/ISOAbstractAggregate.R                               |only
 geometa-0.5-0/geometa/R/ISOAbstractCarrierOfCharacteristics.R                |only
 geometa-0.5-0/geometa/R/ISOAbstractCatalogue.R                               |   70 
 geometa-0.5-0/geometa/R/ISOAbstractObject.R                                  |  442 ++++-
 geometa-0.5-0/geometa/R/ISOAbstractPropertyType.R                            |only
 geometa-0.5-0/geometa/R/ISOAbstractReferenceSystem.R                         |only
 geometa-0.5-0/geometa/R/ISOAbstractResult.R                                  |only
 geometa-0.5-0/geometa/R/ISOAddress.R                                         |   70 
 geometa-0.5-0/geometa/R/ISOAggregateInformation.R                            |   14 
 geometa-0.5-0/geometa/R/ISOAnchor.R                                          |    2 
 geometa-0.5-0/geometa/R/ISOApplicationSchemaInformation.R                    |only
 geometa-0.5-0/geometa/R/ISOAssociation.R                                     |only
 geometa-0.5-0/geometa/R/ISOAssociationRole.R                                 |   20 
 geometa-0.5-0/geometa/R/ISOAssociationType.R                                 |    4 
 geometa-0.5-0/geometa/R/ISOAttributes.R                                      |only
 geometa-0.5-0/geometa/R/ISOBand.R                                            |   22 
 geometa-0.5-0/geometa/R/ISOBaseDate.R                                        |    2 
 geometa-0.5-0/geometa/R/ISOBaseDateTime.R                                    |    2 
 geometa-0.5-0/geometa/R/ISOBinary.R                                          |only
 geometa-0.5-0/geometa/R/ISOBinding.R                                         |   20 
 geometa-0.5-0/geometa/R/ISOBoundAssociationRole.R                            |    6 
 geometa-0.5-0/geometa/R/ISOBoundFeatureAttribute.R                           |    6 
 geometa-0.5-0/geometa/R/ISOBoundingPolygon.R                                 |    4 
 geometa-0.5-0/geometa/R/ISOBrowseGraphic.R                                   |   47 
 geometa-0.5-0/geometa/R/ISOCarrierOfCharacteristics.R                        |   53 
 geometa-0.5-0/geometa/R/ISOCellGeometry.R                                    |    4 
 geometa-0.5-0/geometa/R/ISOCharacterSet.R                                    |    4 
 geometa-0.5-0/geometa/R/ISOCitation.R                                        |   47 
 geometa-0.5-0/geometa/R/ISOCitationSeries.R                                  |only
 geometa-0.5-0/geometa/R/ISOClassification.R                                  |    4 
 geometa-0.5-0/geometa/R/ISOCodeListValue.R                                   |   56 
 geometa-0.5-0/geometa/R/ISOCodelist.R                                        |   21 
 geometa-0.5-0/geometa/R/ISOConformanceResult.R                               |   20 
 geometa-0.5-0/geometa/R/ISOConstraint.R                                      |   15 
 geometa-0.5-0/geometa/R/ISOConstraints.R                                     |   33 
 geometa-0.5-0/geometa/R/ISOContact.R                                         |    6 
 geometa-0.5-0/geometa/R/ISOContentInformation.R                              |    4 
 geometa-0.5-0/geometa/R/ISOCountry.R                                         |only
 geometa-0.5-0/geometa/R/ISOCoupledResource.R                                 |   26 
 geometa-0.5-0/geometa/R/ISOCouplingType.R                                    |    4 
 geometa-0.5-0/geometa/R/ISOCoverageContentType.R                             |    4 
 geometa-0.5-0/geometa/R/ISOCoverageDescription.R                             |    6 
 geometa-0.5-0/geometa/R/ISODCPList.R                                         |    4 
 geometa-0.5-0/geometa/R/ISODataIdentification.R                              |  142 +
 geometa-0.5-0/geometa/R/ISODataQuality.R                                     |    8 
 geometa-0.5-0/geometa/R/ISODataQualityAbstractElement.R                      |   59 
 geometa-0.5-0/geometa/R/ISODataQualityCompleteness.R                         |only
 geometa-0.5-0/geometa/R/ISODataQualityLogicalConsistency.R                   |only
 geometa-0.5-0/geometa/R/ISODataQualityPositionalAccuracy.R                   |only
 geometa-0.5-0/geometa/R/ISODataQualityTemporalAccuracy.R                     |only
 geometa-0.5-0/geometa/R/ISODataQualityThematicAccuracy.R                     |only
 geometa-0.5-0/geometa/R/ISODataSet.R                                         |only
 geometa-0.5-0/geometa/R/ISODate.R                                            |    6 
 geometa-0.5-0/geometa/R/ISODateType.R                                        |    8 
 geometa-0.5-0/geometa/R/ISODefinitionReference.R                             |   10 
 geometa-0.5-0/geometa/R/ISODefinitionSource.R                                |    6 
 geometa-0.5-0/geometa/R/ISODigitalTransferOptions.R                          |   12 
 geometa-0.5-0/geometa/R/ISODimension.R                                       |   12 
 geometa-0.5-0/geometa/R/ISODimensionNameType.R                               |    4 
 geometa-0.5-0/geometa/R/ISODistance.R                                        |    2 
 geometa-0.5-0/geometa/R/ISODistribution.R                                    |   16 
 geometa-0.5-0/geometa/R/ISODistributionUnits.R                               |only
 geometa-0.5-0/geometa/R/ISODistributor.R                                     |   12 
 geometa-0.5-0/geometa/R/ISOElementSequence.R                                 |   12 
 geometa-0.5-0/geometa/R/ISOEvaluationMethodType.R                            |    4 
 geometa-0.5-0/geometa/R/ISOExtendedElementInformation.R                      |  118 -
 geometa-0.5-0/geometa/R/ISOExtent.R                                          |   24 
 geometa-0.5-0/geometa/R/ISOFeatureAssociation.R                              |    2 
 geometa-0.5-0/geometa/R/ISOFeatureAttribute.R                                |   40 
 geometa-0.5-0/geometa/R/ISOFeatureCatalogue.R                                |   34 
 geometa-0.5-0/geometa/R/ISOFeatureCatalogueDescription.R                     |   14 
 geometa-0.5-0/geometa/R/ISOFeatureOperation.R                                |   24 
 geometa-0.5-0/geometa/R/ISOFeatureType.R                                     |   96 -
 geometa-0.5-0/geometa/R/ISOFileName.R                                        |    2 
 geometa-0.5-0/geometa/R/ISOFormat.R                                          |   31 
 geometa-0.5-0/geometa/R/ISOFreeText.R                                        |only
 geometa-0.5-0/geometa/R/ISOGeographicBoundingBox.R                           |   58 
 geometa-0.5-0/geometa/R/ISOGeographicExtent.R                                |    2 
 geometa-0.5-0/geometa/R/ISOGeometricObjectType.R                             |    4 
 geometa-0.5-0/geometa/R/ISOGeometricObjects.R                                |    6 
 geometa-0.5-0/geometa/R/ISOGeorectified.R                                    |only
 geometa-0.5-0/geometa/R/ISOGeoreferenceable.R                                |   34 
 geometa-0.5-0/geometa/R/ISOGridSpatialRepresentation.R                       |   14 
 geometa-0.5-0/geometa/R/ISOHierarchyLevel.R                                  |    4 
 geometa-0.5-0/geometa/R/ISOIdentification.R                                  |  126 -
 geometa-0.5-0/geometa/R/ISOIdentifier.R                                      |    8 
 geometa-0.5-0/geometa/R/ISOImageDescription.R                                |only
 geometa-0.5-0/geometa/R/ISOImagingCondition.R                                |only
 geometa-0.5-0/geometa/R/ISOInheritanceRelation.R                             |   38 
 geometa-0.5-0/geometa/R/ISOInitiative.R                                      |only
 geometa-0.5-0/geometa/R/ISOInitiativeType.R                                  |    4 
 geometa-0.5-0/geometa/R/ISOKeywordType.R                                     |    4 
 geometa-0.5-0/geometa/R/ISOKeywords.R                                        |   26 
 geometa-0.5-0/geometa/R/ISOLanguage.R                                        |    4 
 geometa-0.5-0/geometa/R/ISOLegalConstraints.R                                |   16 
 geometa-0.5-0/geometa/R/ISOLineage.R                                         |   24 
 geometa-0.5-0/geometa/R/ISOListedValue.R                                     |   39 
 geometa-0.5-0/geometa/R/ISOLocalName.R                                       |    2 
 geometa-0.5-0/geometa/R/ISOLocale.R                                          |only
 geometa-0.5-0/geometa/R/ISOLocaleContainer.R                                 |only
 geometa-0.5-0/geometa/R/ISOLocalisedCharacterString.R                        |only
 geometa-0.5-0/geometa/R/ISOMaintenanceFrequency.R                            |    4 
 geometa-0.5-0/geometa/R/ISOMaintenanceInformation.R                          |    4 
 geometa-0.5-0/geometa/R/ISOMeasure.R                                         |    4 
 geometa-0.5-0/geometa/R/ISOMedium.R                                          |only
 geometa-0.5-0/geometa/R/ISOMediumFormat.R                                    |only
 geometa-0.5-0/geometa/R/ISOMediumName.R                                      |only
 geometa-0.5-0/geometa/R/ISOMemberName.R                                      |   29 
 geometa-0.5-0/geometa/R/ISOMetaIdentifier.R                                  |    4 
 geometa-0.5-0/geometa/R/ISOMetadata.R                                        |   73 
 geometa-0.5-0/geometa/R/ISOMetadataExtensionInformation.R                    |   12 
 geometa-0.5-0/geometa/R/ISOMetadataNamespace.R                               |    4 
 geometa-0.5-0/geometa/R/ISOMetadataSchemas.R                                 |    2 
 geometa-0.5-0/geometa/R/ISOMimeFileType.R                                    |   30 
 geometa-0.5-0/geometa/R/ISOMultiplicity.R                                    |    4 
 geometa-0.5-0/geometa/R/ISOMultiplicityRange.R                               |    5 
 geometa-0.5-0/geometa/R/ISOObligation.R                                      |   26 
 geometa-0.5-0/geometa/R/ISOOnlineResource.R                                  |   52 
 geometa-0.5-0/geometa/R/ISOOperationMetadata.R                               |   60 
 geometa-0.5-0/geometa/R/ISOOtherAggregate.R                                  |only
 geometa-0.5-0/geometa/R/ISOParameter.R                                       |   48 
 geometa-0.5-0/geometa/R/ISOParameterDirection.R                              |    4 
 geometa-0.5-0/geometa/R/ISOPixelOrientation.R                                |only
 geometa-0.5-0/geometa/R/ISOPlatform.R                                        |only
 geometa-0.5-0/geometa/R/ISOPortrayalCatalogueReference.R                     |only
 geometa-0.5-0/geometa/R/ISOPresentationForm.R                                |    4 
 geometa-0.5-0/geometa/R/ISOProcessStep.R                                     |   36 
 geometa-0.5-0/geometa/R/ISOProductionSeries.R                                |only
 geometa-0.5-0/geometa/R/ISOPropertyType.R                                    |   70 
 geometa-0.5-0/geometa/R/ISOQuantitativeResult.R                              |only
 geometa-0.5-0/geometa/R/ISORangeDimension.R                                  |   14 
 geometa-0.5-0/geometa/R/ISORecord.R                                          |    2 
 geometa-0.5-0/geometa/R/ISORecordType.R                                      |    2 
 geometa-0.5-0/geometa/R/ISOReferenceIdentifier.R                             |    5 
 geometa-0.5-0/geometa/R/ISOReferenceSystem.R                                 |    4 
 geometa-0.5-0/geometa/R/ISORepresentativeFraction.R                          |    6 
 geometa-0.5-0/geometa/R/ISOResolution.R                                      |only
 geometa-0.5-0/geometa/R/ISOResponsibleParty.R                                |   40 
 geometa-0.5-0/geometa/R/ISORestriction.R                                     |    4 
 geometa-0.5-0/geometa/R/ISORole.R                                            |    6 
 geometa-0.5-0/geometa/R/ISORoleType.R                                        |    4 
 geometa-0.5-0/geometa/R/ISOScale.R                                           |    2 
 geometa-0.5-0/geometa/R/ISOScope.R                                           |    6 
 geometa-0.5-0/geometa/R/ISOScopeDescription.R                                |only
 geometa-0.5-0/geometa/R/ISOScopedName.R                                      |    4 
 geometa-0.5-0/geometa/R/ISOSecurityConstraints.R                             |   40 
 geometa-0.5-0/geometa/R/ISOSensor.R                                          |only
 geometa-0.5-0/geometa/R/ISOSeries.R                                          |only
 geometa-0.5-0/geometa/R/ISOServiceIdentification.R                           |  322 +++-
 geometa-0.5-0/geometa/R/ISOSource.R                                          |   38 
 geometa-0.5-0/geometa/R/ISOSpatialRepresentation.R                           |    4 
 geometa-0.5-0/geometa/R/ISOSpatialRepresentationType.R                       |    6 
 geometa-0.5-0/geometa/R/ISOSpatialTemporalExtent.R                           |   29 
 geometa-0.5-0/geometa/R/ISOStandardOrderProcess.R                            |   40 
 geometa-0.5-0/geometa/R/ISOStatus.R                                          |    4 
 geometa-0.5-0/geometa/R/ISOStereoMate.R                                      |only
 geometa-0.5-0/geometa/R/ISOTelephone.R                                       |   24 
 geometa-0.5-0/geometa/R/ISOTemporalExtent.R                                  |   12 
 geometa-0.5-0/geometa/R/ISOTopicCategory.R                                   |    4 
 geometa-0.5-0/geometa/R/ISOTopologyLevel.R                                   |    4 
 geometa-0.5-0/geometa/R/ISOTypeName.R                                        |   14 
 geometa-0.5-0/geometa/R/ISOURL.R                                             |   13 
 geometa-0.5-0/geometa/R/ISOUnlimitedInteger.R                                |    4 
 geometa-0.5-0/geometa/R/ISOUsage.R                                           |only
 geometa-0.5-0/geometa/R/ISOVectorSpatialRepresentation.R                     |   15 
 geometa-0.5-0/geometa/R/ISOVerticalExtent.R                                  |   35 
 geometa-0.5-0/geometa/R/geometa.R                                            |    4 
 geometa-0.5-0/geometa/R/geometa_coverage.R                                   |only
 geometa-0.5-0/geometa/R/geometa_logger.R                                     |only
 geometa-0.5-0/geometa/R/geometa_mapping.R                                    |only
 geometa-0.5-0/geometa/R/profile.R                                            |    6 
 geometa-0.5-0/geometa/R/readISO19139.R                                       |only
 geometa-0.5-0/geometa/README.md                                              |   47 
 geometa-0.5-0/geometa/inst/extdata/coverage                                  |only
 geometa-0.5-0/geometa/inst/extdata/mappings                                  |only
 geometa-0.5-0/geometa/inst/extdata/schemas/gmd/gmd.xsd                       |    2 
 geometa-0.5-0/geometa/inst/extdata/schemas/gmi                               |only
 geometa-0.5-0/geometa/inst/extdata/schemas/srv/serviceModel.xsd              |    2 
 geometa-0.5-0/geometa/man/INSPIREMetadataValidator.Rd                        |only
 geometa-0.5-0/geometa/man/ISOAbsoluteExternalPositionalAccuracy.Rd           |    6 
 geometa-0.5-0/geometa/man/ISOAbstractAggregate.Rd                            |only
 geometa-0.5-0/geometa/man/ISOAbstractCarrierOfCharacteristics.Rd             |only
 geometa-0.5-0/geometa/man/ISOAbstractCatalogue.Rd                            |   47 
 geometa-0.5-0/geometa/man/ISOAbstractCompleteness.Rd                         |only
 geometa-0.5-0/geometa/man/ISOAbstractLogicalConsistency.Rd                   |only
 geometa-0.5-0/geometa/man/ISOAbstractObject.Rd                               |   48 
 geometa-0.5-0/geometa/man/ISOAbstractPositionalAccuracy.Rd                   |    6 
 geometa-0.5-0/geometa/man/ISOAbstractPropertyType.Rd                         |only
 geometa-0.5-0/geometa/man/ISOAbstractReferenceSystem.Rd                      |only
 geometa-0.5-0/geometa/man/ISOAbstractResult.Rd                               |only
 geometa-0.5-0/geometa/man/ISOAbstractTemporalAccuracy.Rd                     |only
 geometa-0.5-0/geometa/man/ISOAbstractThematicAccuracy.Rd                     |only
 geometa-0.5-0/geometa/man/ISOAccuracyOfATimeMeasurement.Rd                   |only
 geometa-0.5-0/geometa/man/ISOAddress.Rd                                      |   45 
 geometa-0.5-0/geometa/man/ISOAggregateInformation.Rd                         |   14 
 geometa-0.5-0/geometa/man/ISOAnchor.Rd                                       |    2 
 geometa-0.5-0/geometa/man/ISOApplicationSchemaInformation.Rd                 |only
 geometa-0.5-0/geometa/man/ISOAssociation.Rd                                  |only
 geometa-0.5-0/geometa/man/ISOAssociationRole.Rd                              |   20 
 geometa-0.5-0/geometa/man/ISOAssociationType.Rd                              |    8 
 geometa-0.5-0/geometa/man/ISOAttributes.Rd                                   |only
 geometa-0.5-0/geometa/man/ISOBand.Rd                                         |   20 
 geometa-0.5-0/geometa/man/ISOBinary.Rd                                       |only
 geometa-0.5-0/geometa/man/ISOBinding.Rd                                      |   13 
 geometa-0.5-0/geometa/man/ISOBoundAssociationRole.Rd                         |    6 
 geometa-0.5-0/geometa/man/ISOBoundFeatureAttribute.Rd                        |    6 
 geometa-0.5-0/geometa/man/ISOBoundingPolygon.Rd                              |    4 
 geometa-0.5-0/geometa/man/ISOBrowseGraphic.Rd                                |   20 
 geometa-0.5-0/geometa/man/ISOCarrierOfCharacteristics.Rd                     |   26 
 geometa-0.5-0/geometa/man/ISOCellGeometry.Rd                                 |    8 
 geometa-0.5-0/geometa/man/ISOCharacterSet.Rd                                 |    8 
 geometa-0.5-0/geometa/man/ISOCitation.Rd                                     |   38 
 geometa-0.5-0/geometa/man/ISOCitationSeries.Rd                               |only
 geometa-0.5-0/geometa/man/ISOClassification.Rd                               |    8 
 geometa-0.5-0/geometa/man/ISOCodeListValue.Rd                                |    8 
 geometa-0.5-0/geometa/man/ISOCodelist.Rd                                     |   14 
 geometa-0.5-0/geometa/man/ISOCompletenessCommission.Rd                       |only
 geometa-0.5-0/geometa/man/ISOCompletenessOmission.Rd                         |only
 geometa-0.5-0/geometa/man/ISOConceptualConsistency.Rd                        |only
 geometa-0.5-0/geometa/man/ISOConformanceResult.Rd                            |   15 
 geometa-0.5-0/geometa/man/ISOConstraint.Rd                                   |    9 
 geometa-0.5-0/geometa/man/ISOConstraints.Rd                                  |   19 
 geometa-0.5-0/geometa/man/ISOContact.Rd                                      |    6 
 geometa-0.5-0/geometa/man/ISOContentInformation.Rd                           |    2 
 geometa-0.5-0/geometa/man/ISOCountry.Rd                                      |only
 geometa-0.5-0/geometa/man/ISOCoupledResource.Rd                              |   16 
 geometa-0.5-0/geometa/man/ISOCouplingType.Rd                                 |    8 
 geometa-0.5-0/geometa/man/ISOCoverageContentType.Rd                          |    8 
 geometa-0.5-0/geometa/man/ISOCoverageDescription.Rd                          |    6 
 geometa-0.5-0/geometa/man/ISODCPList.Rd                                      |    8 
 geometa-0.5-0/geometa/man/ISODataIdentification.Rd                           |  117 -
 geometa-0.5-0/geometa/man/ISODataQuality.Rd                                  |    8 
 geometa-0.5-0/geometa/man/ISODataQualityAbstractElement.Rd                   |   39 
 geometa-0.5-0/geometa/man/ISODataSet.Rd                                      |only
 geometa-0.5-0/geometa/man/ISODate.Rd                                         |    6 
 geometa-0.5-0/geometa/man/ISODateType.Rd                                     |    8 
 geometa-0.5-0/geometa/man/ISODefinitionReference.Rd                          |   10 
 geometa-0.5-0/geometa/man/ISODefinitionSource.Rd                             |    6 
 geometa-0.5-0/geometa/man/ISODigitalTransferOptions.Rd                       |   14 
 geometa-0.5-0/geometa/man/ISODimension.Rd                                    |   12 
 geometa-0.5-0/geometa/man/ISODimensionNameType.Rd                            |    8 
 geometa-0.5-0/geometa/man/ISODistance.Rd                                     |    6 
 geometa-0.5-0/geometa/man/ISODistribution.Rd                                 |   18 
 geometa-0.5-0/geometa/man/ISODistributionUnits.Rd                            |only
 geometa-0.5-0/geometa/man/ISODistributor.Rd                                  |   12 
 geometa-0.5-0/geometa/man/ISODomainConsistency.Rd                            |   44 
 geometa-0.5-0/geometa/man/ISOElementSequence.Rd                              |    6 
 geometa-0.5-0/geometa/man/ISOEvaluationMethodType.Rd                         |    8 
 geometa-0.5-0/geometa/man/ISOExtendedElementInformation.Rd                   |   79 -
 geometa-0.5-0/geometa/man/ISOExtent.Rd                                       |   24 
 geometa-0.5-0/geometa/man/ISOFeatureAssociation.Rd                           |    2 
 geometa-0.5-0/geometa/man/ISOFeatureAttribute.Rd                             |   26 
 geometa-0.5-0/geometa/man/ISOFeatureCatalogue.Rd                             |   37 
 geometa-0.5-0/geometa/man/ISOFeatureCatalogueDescription.Rd                  |   14 
 geometa-0.5-0/geometa/man/ISOFeatureOperation.Rd                             |   14 
 geometa-0.5-0/geometa/man/ISOFeatureType.Rd                                  |   46 
 geometa-0.5-0/geometa/man/ISOFileName.Rd                                     |    2 
 geometa-0.5-0/geometa/man/ISOFormat.Rd                                       |   22 
 geometa-0.5-0/geometa/man/ISOFormatConsistency.Rd                            |only
 geometa-0.5-0/geometa/man/ISOFreeText.Rd                                     |only
 geometa-0.5-0/geometa/man/ISOGeographicBoundingBox.Rd                        |   22 
 geometa-0.5-0/geometa/man/ISOGeometricObjectType.Rd                          |    8 
 geometa-0.5-0/geometa/man/ISOGeometricObjects.Rd                             |    6 
 geometa-0.5-0/geometa/man/ISOGeorectified.Rd                                 |only
 geometa-0.5-0/geometa/man/ISOGeoreferenceable.Rd                             |   29 
 geometa-0.5-0/geometa/man/ISOGridSpatialRepresentation.Rd                    |   14 
 geometa-0.5-0/geometa/man/ISOGriddedDataPositionalAccuracy.Rd                |    6 
 geometa-0.5-0/geometa/man/ISOHierarchyLevel.Rd                               |    8 
 geometa-0.5-0/geometa/man/ISOIdentification.Rd                               |  102 -
 geometa-0.5-0/geometa/man/ISOIdentifier.Rd                                   |    8 
 geometa-0.5-0/geometa/man/ISOImageDescription.Rd                             |only
 geometa-0.5-0/geometa/man/ISOImagingCondition.Rd                             |only
 geometa-0.5-0/geometa/man/ISOInheritanceRelation.Rd                          |   28 
 geometa-0.5-0/geometa/man/ISOInitiative.Rd                                   |only
 geometa-0.5-0/geometa/man/ISOInitiativeType.Rd                               |    8 
 geometa-0.5-0/geometa/man/ISOKeywordType.Rd                                  |    8 
 geometa-0.5-0/geometa/man/ISOKeywords.Rd                                     |   17 
 geometa-0.5-0/geometa/man/ISOLanguage.Rd                                     |    8 
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Package ptmixed updated to version 0.0.4 with previous version 0.0.3 dated 2019-05-06

Title: Poisson-Tweedie Generalized Linear Mixed Model
Description: Fits Poisson-Tweedie generalized linear mixed model. Likelihood approximation based on adaptive Gauss Hermite quadrature rule.
Author: Mirko Signorelli [aut, cre], Pietro Spitali [aut], Roula Tsonaka [aut]
Maintainer: Mirko Signorelli <m.signorelli@lumc.nl>

Diff between ptmixed versions 0.0.3 dated 2019-05-06 and 0.0.4 dated 2019-05-26

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Package FAMoS updated to version 0.2.0 with previous version 0.1.0 dated 2018-12-03

Title: A Flexible Algorithm for Model Selection
Description: Given a set of parameters describing model dynamics and a corresponding cost function, FAMoS performs a dynamic forward-backward model selection on a specified selection criterion. It also applies a non-local swap search method. Works on any cost function.
Author: Michael Gabel, Tobias Hohl
Maintainer: Michael Gabel <m_gabel@gmx.de>

Diff between FAMoS versions 0.1.0 dated 2018-12-03 and 0.2.0 dated 2019-05-26

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Package tsDyn updated to version 0.9-48.1 with previous version 0.9-48 dated 2018-06-03

Title: Nonlinear Time Series Models with Regime Switching
Description: Implements nonlinear autoregressive (AR) time series models. For univariate series, a non-parametric approach is available through additive nonlinear AR. Parametric modeling and testing for regime switching dynamics is available when the transition is either direct (TAR: threshold AR) or smooth (STAR: smooth transition AR, LSTAR). For multivariate series, one can estimate a range of TVAR or threshold cointegration TVECM models with two or three regimes. Tests can be conducted for TVAR as well as for TVECM (Hansen and Seo 2002 and Seo 2006).
Author: Antonio Fabio Di Narzo [aut], Jose Luis Aznarte [ctb], Matthieu Stigler [aut, cre]
Maintainer: ORPHANED

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Package RItools updated to version 0.1-16.1 with previous version 0.1-16 dated 2018-06-19

Title: Randomization Inference Tools
Description: Tools for randomization inference.
Author: Jake Bowers <jwbowers@illinois.edu>, Mark Fredrickson <mark.m.fredrickson@gmail.com>, and Ben Hansen <ben.hansen@umich.edu>
Maintainer: ORPHANED

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Package cmprsk updated to version 2.2-7.1 with previous version 2.2-7 dated 2014-06-17

Title: Subdistribution Analysis of Competing Risks
Description: Estimation, testing and regression modeling of subdistribution functions in competing risks, as described in Gray (1988), A class of K-sample tests for comparing the cumulative incidence of a competing risk, Ann. Stat. 16:1141-1154, and Fine JP and Gray RJ (1999), A proportional hazards model for the subdistribution of a competing risk, JASA, 94:496-509.
Author: Bob Gray <gray@jimmy.harvard.edu>
Maintainer: ORPHANED

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Package chillR updated to version 0.70.17 with previous version 0.70.15 dated 2019-03-05

Title: Statistical Methods for Phenology Analysis in Temperate Fruit Trees
Description: The phenology of plants (i.e. the timing of their annual life phases) depends on climatic cues. For temperate trees and many other plants, spring phases, such as leaf emergence and flowering, have been found to result from the effects of both cool (chilling) conditions and heat. Fruit tree scientists (pomologists) have developed some metrics to quantify chilling and heat (e.g. see Luedeling (2012) <doi.org/10.1016/j.scienta.2012.07.011>). 'chillR' contains functions for processing temperature records into chilling (Chilling Hours, Utah Chill Units and Chill Portions) and heat units (Growing Degree Hours). Regarding chilling metrics, Chill Portions are often considered the most promising, but they are difficult to calculate. This package makes it easy. 'chillR' also contains procedures for conducting a PLS analysis relating phenological dates (e.g. bloom dates) to either mean temperatures or mean chill and heat accumulation rates, based on long-term weather and phenology records (Luedeling and Gassner (2012) <doi.org/10.1016/j.agrformet.2011.10.020>). As of version 0.65, it also includes functions for generating weather scenarios with a weather generator, for conducting climate change analyses for temperature-based climatic metrics and for plotting results from such analyses. Since version 0.70, 'chillR' contains a function for interpolating hourly temperature records.
Author: Eike Luedeling
Maintainer: Eike Luedeling <eike@eikeluedeling.com>

Diff between chillR versions 0.70.15 dated 2019-03-05 and 0.70.17 dated 2019-05-26

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Package ggfortify updated to version 0.4.7 with previous version 0.4.6 dated 2019-03-20

Title: Data Visualization Tools for Statistical Analysis Results
Description: Unified plotting tools for statistics commonly used, such as GLM, time series, PCA families, clustering and survival analysis. The package offers a single plotting interface for these analysis results and plots in a unified style using 'ggplot2'.
Author: Masaaki Horikoshi [aut], Yuan Tang [aut, cre] (<https://orcid.org/0000-0001-5243-233X>), Austin Dickey [ctb], Matthias Grenié [ctb], Ryan Thompson [ctb], Luciano Selzer [ctb], Dario Strbenac [ctb], Kirill Voronin [ctb]
Maintainer: Yuan Tang <terrytangyuan@gmail.com>

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Package muRty updated to version 0.3.0 with previous version 0.1.2 dated 2019-04-04

Title: Murty's Algorithm for k-Best Assignments
Description: Calculates k-best solutions and costs for an assignment problem following the method outlined in Murty (1968) <doi:10.1287/opre.16.3.682>.
Author: Aljaz Jelenko [aut, cre]
Maintainer: Aljaz Jelenko <aljaz.jelenko@amis.net>

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Package geosphere updated to version 1.5-10 with previous version 1.5-7 dated 2017-11-05

Title: Spherical Trigonometry
Description: Spherical trigonometry for geographic applications. That is, compute distances and related measures for angular (longitude/latitude) locations.
Author: Robert J. Hijmans [cre, aut], Ed Williams [ctb], Chris Vennes [ctb]
Maintainer: Robert J. Hijmans <r.hijmans@gmail.com>

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Package estimatr updated to version 0.18.0 with previous version 0.16 dated 2019-03-02

Title: Fast Estimators for Design-Based Inference
Description: Fast procedures for small set of commonly-used, design-appropriate estimators with robust standard errors and confidence intervals. Includes estimators for linear regression, instrumental variables regression, difference-in-means, Horvitz-Thompson estimation, and regression improving precision of experimental estimates by interacting treatment with centered pre-treatment covariates introduced by Lin (2013) <doi:10.1214/12-AOAS583>.
Author: Graeme Blair [aut, cre], Jasper Cooper [aut], Alexander Coppock [aut], Macartan Humphreys [aut], Luke Sonnet [aut], Neal Fultz [ctb], Lily Medina [ctb]
Maintainer: Graeme Blair <graeme.blair@ucla.edu>

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