Sat, 20 Jul 2019

Package ezplot updated to version 0.3.1 with previous version 0.3.0 dated 2019-07-09

Title: Functions for Common Chart Types
Description: Wrapper for the 'ggplot2' package that creates a variety of common charts (e.g. bar, line, area, ROC, waterfall, pie) while aiming to reduce typing.
Author: Wojtek Kostelecki
Maintainer: Wojtek Kostelecki <wojtek.kostelecki@gmail.com>

Diff between ezplot versions 0.3.0 dated 2019-07-09 and 0.3.1 dated 2019-07-20

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Package dendroTools updated to version 1.0.6 with previous version 1.0.5 dated 2019-05-31

Title: Linear and Nonlinear Methods for Analyzing Daily and Monthly Dendroclimatological Data
Description: Provides novel dendroclimatological methods, primarily used by the Tree-ring research community. There are four core functions. The first one is daily_response(), which finds the optimal sequence of days that are related to one or more tree-ring proxy records. Similar function is daily_response_seascorr(), which implements partial correlations in the analysis of daily response functions. For the enthusiast of monthly data, there is monthly_response() function. The last core function is compare_methods(), which effectively compares several linear and nonlinear regression algorithms on the task of climate reconstruction.
Author: Jernej Jevsenak [aut, cre]
Maintainer: Jernej Jevsenak <jernej.jevsenak@gmail.com>

Diff between dendroTools versions 1.0.5 dated 2019-05-31 and 1.0.6 dated 2019-07-20

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Package TipDatingBeast (with last version 1.0-8) was removed from CRAN

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2018-03-29 1.0-8
2018-01-30 1.0-7
2017-11-21 1.0-6
2016-09-05 1.0-5
2016-06-14 1.0-4
2016-06-06 1.0-3
2016-05-27 1.0-2
2015-07-29 0.1-6

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Package WACS (with last version 1.0) was removed from CRAN

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2016-02-25 1.0

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Package fmlogcondens (with last version 1.0.2) was removed from CRAN

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2018-03-23 1.0.2
2018-03-20 1.0.1
2018-03-09 1.0.0

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Package crplyr (with last version 0.3.1) was removed from CRAN

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2019-06-06 0.3.1
2019-04-03 0.3.0
2018-06-29 0.2.0
2017-08-22 0.1.4
2017-06-06 0.1.2
2017-05-05 0.1.0

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Package qclust (with last version 1.0) was removed from CRAN

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2015-04-16 1.0

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Package MEclustnet (with last version 1.2.1) was removed from CRAN

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2018-05-11 1.2.1
2018-05-06 1.2
2017-01-26 1.1
2016-10-13 1.0

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Package CorReg (with last version 1.2.8) was removed from CRAN

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2018-04-23 1.2.8
2017-05-03 1.2.1
2016-10-24 1.1.9
2015-12-09 1.1.1
2015-06-09 1.0.5
2015-01-13 1.0
2014-11-04 0.15.8
2014-10-02 0.15.7
2014-09-12 0.15.6
2014-07-15 0.15.0
2014-05-13 0.14.5
2014-03-13 0.14.3
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2014-02-11 0.14.0
2014-02-11 0.14.1

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Package fieldRS (with last version 0.2.1) was removed from CRAN

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2018-12-11 0.2.1
2018-09-16 0.1.1
2018-08-02 0.1.0

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Package IATscores (with last version 0.2.1) was removed from CRAN

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2018-02-13 0.2.1
2015-05-19 0.1-2

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Package swissdd (with last version 1.0.0) was removed from CRAN

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2019-06-03 1.0.0

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Package doFuture updated to version 0.8.1 with previous version 0.8.0 dated 2019-03-17

Title: A Universal Foreach Parallel Adapter using the Future API of the 'future' Package
Description: Provides a '%dopar%' adapter such that any type of futures can be used as backends for the 'foreach' framework.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>

Diff between doFuture versions 0.8.0 dated 2019-03-17 and 0.8.1 dated 2019-07-20

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Package cvms updated to version 0.1.1 with previous version 0.1.0 dated 2019-07-02

Title: Cross-Validation for Model Selection
Description: Run cross-validation of one or multiple regression models and get relevant evaluation metrics in a tidy format. Validate the best model on a test set and compare it to a baseline evaluation. Currently supports Gaussian and binomial regression. Described in chp. 5 of Jeyaraman, B. P., Olsen, L. R., & Wambugu M. (2019, ISBN: 9781838550134).
Author: Ludvig Renbo Olsen [aut, cre], Benjamin Hugh Zachariae [aut]
Maintainer: Ludvig Renbo Olsen <r-pkgs@ludvigolsen.dk>

Diff between cvms versions 0.1.0 dated 2019-07-02 and 0.1.1 dated 2019-07-20

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New package qif with initial version 1.5
Package: qif
Title: Quadratic Inference Function
Version: 1.5
Date: 2019-7-2
Authors@R: c( person(given = "Zhichang", family = "Jiang", role = c("aut")), person(given = "Peter", family = "Song", role = c("aut"), email = "pxsong@umich.edu"), person(given = "Michael", family = "Kleinsasser", role = c("cre"), email = "mkleinsa@umich.edu"))
Depends: R (>= 3.5.0)
Description: Developed to perform the estimation and inference for regression coefficient parameters in longitudinal marginal models using the method of quadratic inference functions. Like generalized estimating equations, this method is also a quasi-likelihood inference method. It has been showed that the method gives consistent estimators of the regression coefficients even if the correlation structure is misspecified, and it is more efficient than GEE when the correlation structure is misspecified. Based on Qu, A., Lindsay, B.G. and Li, B. (2000) <doi:10.1093/biomet/87.4.823>.
Imports: MASS
License: GPL-2
Packaged: 2019-07-18 16:10:38 UTC; mkleinsa
Encoding: UTF-8
LazyData: true
BugReports: https://github.com/umich-biostatistics/qif/issues
RoxygenNote: 6.1.1
NeedsCompilation: yes
Author: Zhichang Jiang [aut], Peter Song [aut], Michael Kleinsasser [cre]
Maintainer: Michael Kleinsasser <mkleinsa@umich.edu>
Repository: CRAN
Date/Publication: 2019-07-20 11:30:02 UTC

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New package ceramic with initial version 0.6.0
Package: ceramic
Title: Download Online Imagery Tiles
Version: 0.6.0
Authors@R: c( person("Michael", "Sumner", email = "mdsumner@gmail.com", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-2471-7511")), person("Miles", "McBain", role = c("ctb"), comment = c(ORCID = "0000-0003-2865-2548")), person("Ben", "Raymond", role = c("ctb"), comment = "regex wizardry") )
Description: Download imagery tiles to a standard cache and load the data into raster objects. Facilities for 'AWS' terrain <https://aws.amazon.com/public-datasets/terrain/> terrain and 'Mapbox' <https://www.mapbox.com/> servers are provided.
Depends: R (>= 3.5.0)
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
Imports: slippymath (>= 0.3.0), curl, dplyr, fs (>= 1.3.0), glue, rappdirs, tibble, stats, purrr, magrittr, rlang, sp, graphics, raster, spex, jpeg, png, utils, reproj
Suggests: testthat, covr, rgdal, spelling
URL: https://github.com/hypertidy/ceramic
BugReports: https://github.com/hypertidy/ceramic/issues
Language: en-US
NeedsCompilation: no
Packaged: 2019-07-15 23:27:42 UTC; mdsumner
Author: Michael Sumner [aut, cre] (<https://orcid.org/0000-0002-2471-7511>), Miles McBain [ctb] (<https://orcid.org/0000-0003-2865-2548>), Ben Raymond [ctb] (regex wizardry)
Maintainer: Michael Sumner <mdsumner@gmail.com>
Repository: CRAN
Date/Publication: 2019-07-20 09:00:02 UTC

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Package CeRNASeek updated to version 2.1 with previous version 2.0 dated 2019-07-08

Title: Identification and Analysis of ceRNA Regulation
Description: Provides several functions to identify and analyse miRNA sponge, including popular methods for identifying miRNA sponge interactions, two types of global ceRNA regulation prediction methods and four types of context-specific prediction methods( Li Y et al.(2017) <doi:10.1093/bib/bbx137>), which are based on miRNA-messenger RNA regulation alone, or by integrating heterogeneous data, respectively. In addition, For predictive ceRNA relationship pairs, this package provides several downstream analysis algorithms, including regulatory network analysis and functional annotation analysis, as well as survival prognosis analysis based on expression of ceRNA ternary pair.
Author: Mengying Zhang,Yongsheng Li,Juan Xu*,Xia Li*
Maintainer: Mengying Zhang <zhangmengying@hrbmu.edu.cn>

Diff between CeRNASeek versions 2.0 dated 2019-07-08 and 2.1 dated 2019-07-20

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Package RZigZag updated to version 0.2.1 with previous version 0.2.0 dated 2019-07-04

Title: Zig-Zag Sampler
Description: Implements the Zig-Zag algorithm (Bierkens, Fearnhead, Roberts, 2016) <arXiv:1607.03188> applied and Bouncy Particle Sampler <arXiv:1510.02451> for a Gaussian target and Student distribution.
Author: Joris Bierkens
Maintainer: Joris Bierkens <j.bierkens@vu.nl>

Diff between RZigZag versions 0.2.0 dated 2019-07-04 and 0.2.1 dated 2019-07-20

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Package rsunlight (with last version 0.7.0) was removed from CRAN

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2018-05-15 0.7.0
2015-12-31 0.4.2
2015-07-01 0.4.0
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2019-06-11 0.1.1

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2019-06-28 1.2.3

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2019-07-18 1.1.4
2019-07-15 1.1.3
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2019-06-18 0.1.6

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Package rtimes (with last version 0.5.0) was removed from CRAN

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2017-08-11 0.5.0
2017-05-10 0.4.0
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Package Rbeast (with last version 0.1) was removed from CRAN

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2019-05-17 0.1

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Package BMSC (with last version 0.2.0) was removed from CRAN

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2019-04-16 0.2.0
2018-10-18 0.1.1
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Package MSEtool (with last version 1.2.0) was removed from CRAN

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2019-06-17 1.2.0
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Package dbarts (with last version 0.9-12) was removed from CRAN

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2019-04-20 0.9-11
2018-12-18 0.9-7
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2018-07-07 0.9-5
2018-07-02 0.9-4
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Package rerddap updated to version 0.6.5 with previous version 0.6.4 dated 2019-07-01

Title: General Purpose Client for 'ERDDAP' Servers
Description: General purpose R client for 'ERDDAP' servers. Includes functions to search for 'datasets', get summary information on 'datasets', and fetch 'datasets', in either 'csv' or 'netCDF' format. 'ERDDAP' information: <https://upwell.pfeg.noaa.gov/erddap/information.html>.
Author: Scott Chamberlain [aut, cre] (<https://orcid.org/0000-0003-1444-9135>), Ben Tupper [ctb], Roy Mendelssohn [ctb]
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>

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Package munsellinterpol updated to version 2.5-1 with previous version 2.4-1 dated 2019-05-16

Title: Interpolate Munsell Renotation Data from Hue/Chroma to CIE/RGB
Description: Methods for interpolating data in the Munsell color system following the ASTM D-1535 standard. Hues and chromas with decimal values can be interpolated and converted to/from the Munsell color system and CIE xyY, CIE XYZ, CIE Lab, CIE Luv, or RGB. Includes ISCC-NBS color block lookup. Based on the work by Paul Centore, "The Munsell and Kubelka-Munk Toolbox".
Author: Jose Gama [aut, trl], Paul Centore [aut, cph], Glenn Davis [aut, cre]
Maintainer: Glenn Davis <gdavis@gluonics.com>

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Package modeldb updated to version 0.2.0 with previous version 0.1.2 dated 2019-03-02

Title: Fits Models Inside the Database
Description: Uses 'dplyr' and 'tidyeval' to fit statistical models inside the database. It currently supports KMeans and linear regression models.
Author: Edgar Ruiz [aut, cre]
Maintainer: Edgar Ruiz <edgar@rstudio.com>

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 man/add_dummy_variables.Rd            |   76 +-
 man/as_parsed_model.modeldb_lm.Rd     |only
 man/linear_regression_db.Rd           |   80 +--
 man/modeldb-package.Rd                |   50 -
 man/plot_kmeans.Rd                    |   78 +--
 man/reexports.Rd                      |only
 man/simple_kmeans_db.Rd               |   93 +--
 tests/testthat.R                      |   12 
 tests/testthat/test-as-parsed-model.R |only
 tests/testthat/test_dummy_var.R       |   44 -
 tests/testthat/test_kmeans.R          |   57 +-
 tests/testthat/test_kmeans_viz.R      |   58 +-
 tests/testthat/test_lr.R              |  164 +++---
 vignettes/kmeans.Rmd                  |  182 +++----
 vignettes/linear-regression.Rmd       |  274 +++++-----
 33 files changed, 2536 insertions(+), 2508 deletions(-)

More information about modeldb at CRAN
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