Title: Functions for Common Chart Types
Description: Wrapper for the 'ggplot2' package that creates a variety of common
charts (e.g. bar, line, area, ROC, waterfall, pie) while aiming to reduce
typing.
Author: Wojtek Kostelecki
Maintainer: Wojtek Kostelecki <wojtek.kostelecki@gmail.com>
Diff between ezplot versions 0.3.0 dated 2019-07-09 and 0.3.1 dated 2019-07-20
ezplot-0.3.0/ezplot/R/ez_data.R |only ezplot-0.3.0/ezplot/R/ez_log_breaks.R |only ezplot-0.3.0/ezplot/R/rel_plot.R |only ezplot-0.3.0/ezplot/man/ez_data.Rd |only ezplot-0.3.0/ezplot/man/ez_data2.Rd |only ezplot-0.3.0/ezplot/man/ez_log_breaks.Rd |only ezplot-0.3.0/ezplot/man/rel_plot.Rd |only ezplot-0.3.0/ezplot/tests/testthat/test-ez_data.R |only ezplot-0.3.1/ezplot/DESCRIPTION | 6 - ezplot-0.3.1/ezplot/MD5 | 54 +++++++--------- ezplot-0.3.1/ezplot/NAMESPACE | 5 - ezplot-0.3.1/ezplot/NEWS.md | 5 + ezplot-0.3.1/ezplot/R/agg_data.R | 24 +++---- ezplot-0.3.1/ezplot/R/bar_plot.R | 24 ++++--- ezplot-0.3.1/ezplot/R/calendar_plot.R | 6 - ezplot-0.3.1/ezplot/R/line_plot.R | 17 ----- ezplot-0.3.1/ezplot/R/pie_plot.R | 10 +- ezplot-0.3.1/ezplot/R/scatter_plot.R |only ezplot-0.3.1/ezplot/R/theme_ez.R | 3 ezplot-0.3.1/ezplot/R/waterfall_plot.R | 20 +++-- ezplot-0.3.1/ezplot/README.md | 11 ++- ezplot-0.3.1/ezplot/inst/doc/basics.R | 15 ++-- ezplot-0.3.1/ezplot/inst/doc/basics.Rmd | 15 ++-- ezplot-0.3.1/ezplot/inst/doc/basics.html | 37 ++++------ ezplot-0.3.1/ezplot/man/agg_data.Rd | 16 ++-- ezplot-0.3.1/ezplot/man/bar_plot.Rd | 35 +++++----- ezplot-0.3.1/ezplot/man/figures/README-line_plot_3.png |only ezplot-0.3.1/ezplot/man/line_plot.Rd | 15 ---- ezplot-0.3.1/ezplot/man/pie_plot.Rd | 10 +- ezplot-0.3.1/ezplot/man/scatter_plot.Rd |only ezplot-0.3.1/ezplot/man/waterfall_plot.Rd | 19 +++-- ezplot-0.3.1/ezplot/tests/testthat/test-calendar_plot.R |only ezplot-0.3.1/ezplot/tests/testthat/test-line_plot.R | 13 ++- ezplot-0.3.1/ezplot/vignettes/basics.Rmd | 15 ++-- 34 files changed, 188 insertions(+), 187 deletions(-)
Title: Linear and Nonlinear Methods for Analyzing Daily and Monthly
Dendroclimatological Data
Description: Provides novel dendroclimatological methods, primarily used by the
Tree-ring research community. There are four core functions. The first one is
daily_response(), which finds the optimal sequence of days that are related
to one or more tree-ring proxy records. Similar function is daily_response_seascorr(),
which implements partial correlations in the analysis of daily response functions.
For the enthusiast of monthly data, there is monthly_response() function.
The last core function is compare_methods(), which effectively compares several
linear and nonlinear regression algorithms on the task of climate reconstruction.
Author: Jernej Jevsenak [aut, cre]
Maintainer: Jernej Jevsenak <jernej.jevsenak@gmail.com>
Diff between dendroTools versions 1.0.5 dated 2019-05-31 and 1.0.6 dated 2019-07-20
DESCRIPTION | 10 +- MD5 | 84 ++++++++++---------- NAMESPACE | 2 NEWS.md | 8 + R/LJ_monthly_precipitation.R | 2 R/boot_f.R |only R/calculate_metrics.R | 2 R/compare_methods.R | 48 +++++------ R/daily_response.R | 134 +++++++++++++++++++++++++++------ R/daily_response_seascorr.R | 37 ++++++--- R/data_MVA.R | 4 R/data_TRW_1.R | 2 R/dataset_MVA_individual.R | 2 R/dataset_TRW.R | 2 R/example_dataset_1.R | 2 R/example_proxies_1.R | 2 R/example_proxies_individual.R | 2 R/generics.R | 13 ++- R/monthly_response.R | 124 +++++++++++++++++++++++++----- R/monthly_response_seascorr.R | 23 ++++- R/plot_extreme.R | 4 R/plot_specific.R | 6 - inst/doc/Examples_daily_response.Rmd | 10 +- inst/doc/Examples_daily_response.html | 108 +++++++++++++------------- inst/doc/compare_methods_vignette.R | 2 inst/doc/compare_methods_vignette.Rmd | 6 - inst/doc/compare_methods_vignette.html | 24 ++--- man/LJ_monthly_precipitation.Rd | 2 man/boot_f.Rd |only man/calculate_metrics.Rd | 2 man/daily_response.Rd | 35 ++++++-- man/daily_response_seascorr.Rd | 11 +- man/data_MVA.Rd | 4 man/data_TRW_1.Rd | 2 man/dataset_MVA_individual.Rd | 2 man/dataset_TRW.Rd | 2 man/example_dataset_1.Rd | 2 man/example_proxies_1.Rd | 2 man/example_proxies_individual.Rd | 2 man/monthly_response.Rd | 34 ++++++-- man/monthly_response_seascorr.Rd | 6 - tests/testthat/test_general.R | 4 vignettes/Examples_daily_response.Rmd | 10 +- vignettes/compare_methods_vignette.Rmd | 6 - 44 files changed, 526 insertions(+), 263 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-03-29 1.0-8
2018-01-30 1.0-7
2017-11-21 1.0-6
2016-09-05 1.0-5
2016-06-14 1.0-4
2016-06-06 1.0-3
2016-05-27 1.0-2
2015-07-29 0.1-6
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-02-25 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-03-23 1.0.2
2018-03-20 1.0.1
2018-03-09 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-06 0.3.1
2019-04-03 0.3.0
2018-06-29 0.2.0
2017-08-22 0.1.4
2017-06-06 0.1.2
2017-05-05 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-04-16 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-05-11 1.2.1
2018-05-06 1.2
2017-01-26 1.1
2016-10-13 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-04-23 1.2.8
2017-05-03 1.2.1
2016-10-24 1.1.9
2015-12-09 1.1.1
2015-06-09 1.0.5
2015-01-13 1.0
2014-11-04 0.15.8
2014-10-02 0.15.7
2014-09-12 0.15.6
2014-07-15 0.15.0
2014-05-13 0.14.5
2014-03-13 0.14.3
2014-02-14 0.14.2
2014-02-11 0.14.0
2014-02-11 0.14.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-12-11 0.2.1
2018-09-16 0.1.1
2018-08-02 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-02-13 0.2.1
2015-05-19 0.1-2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-03 1.0.0
Title: A Universal Foreach Parallel Adapter using the Future API of the
'future' Package
Description: Provides a '%dopar%' adapter such that any type of futures can
be used as backends for the 'foreach' framework.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Diff between doFuture versions 0.8.0 dated 2019-03-17 and 0.8.1 dated 2019-07-20
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- NEWS | 12 ++++++++++++ R/doFuture.R | 13 +++++-------- R/utils.R | 16 ++++++++++++++++ build/vignette.rds |binary tests/cluster-missing-doFuture-pkg.R | 4 ++-- tests/foreach,nested_dopar.R | 18 ++++++++++-------- 8 files changed, 56 insertions(+), 29 deletions(-)
Title: Cross-Validation for Model Selection
Description: Run cross-validation of one or multiple regression models and get relevant evaluation
metrics in a tidy format. Validate the best model on a test set and compare it to a baseline evaluation.
Currently supports Gaussian and binomial regression.
Described in chp. 5 of Jeyaraman, B. P., Olsen, L. R., & Wambugu M. (2019, ISBN: 9781838550134).
Author: Ludvig Renbo Olsen [aut, cre],
Benjamin Hugh Zachariae [aut]
Maintainer: Ludvig Renbo Olsen <r-pkgs@ludvigolsen.dk>
Diff between cvms versions 0.1.0 dated 2019-07-02 and 0.1.1 dated 2019-07-20
DESCRIPTION | 12 - MD5 | 30 +- NEWS.md | 4 R/helpers.R | 32 +++ README.md | 6 inst/doc/Introduction_to_cvms.html | 10 tests/testthat/test_baseline.R | 60 +++-- tests/testthat/test_combine_predictors.R | 19 + tests/testthat/test_cross_validate.R | 254 ++++++++++++++----------- tests/testthat/test_cross_validate_fn_single.R | 44 ++-- tests/testthat/test_cv_plot.R | 2 tests/testthat/test_helpers.R | 2 tests/testthat/test_link_functions.R | 53 ++--- tests/testthat/test_metrics.R | 48 +++- tests/testthat/test_reconstruct_formulas.R | 8 tests/testthat/test_validate.R | 94 +++++---- 16 files changed, 414 insertions(+), 264 deletions(-)
Title: Identification and Analysis of ceRNA Regulation
Description: Provides several functions to identify and analyse miRNA sponge, including
popular methods for identifying miRNA sponge interactions, two types
of global ceRNA regulation prediction methods and four types of context-specific
prediction methods( Li Y et al.(2017) <doi:10.1093/bib/bbx137>), which are based
on miRNA-messenger RNA regulation alone, or by integrating heterogeneous data,
respectively. In addition, For predictive ceRNA relationship pairs, this package
provides several downstream analysis algorithms, including regulatory network
analysis and functional annotation analysis, as well as survival prognosis analysis
based on expression of ceRNA ternary pair.
Author: Mengying Zhang,Yongsheng Li,Juan Xu*,Xia Li*
Maintainer: Mengying Zhang <zhangmengying@hrbmu.edu.cn>
Diff between CeRNASeek versions 2.0 dated 2019-07-08 and 2.1 dated 2019-07-20
DESCRIPTION | 12 +++++---- MD5 | 14 ++++++----- R/ceRNA.cernia.R | 13 +++++++++- R/ceRNA.surv.R | 68 ++++++++++++++++++++++-------------------------------- R/surv.plot.R |only data/dataset.rda |binary man/ceRNA.surv.Rd | 2 - man/dataset.Rd | 6 ++-- man/surv.plot.Rd |only 9 files changed, 59 insertions(+), 56 deletions(-)
Title: Zig-Zag Sampler
Description: Implements the Zig-Zag algorithm (Bierkens, Fearnhead, Roberts, 2016) <arXiv:1607.03188> applied and Bouncy Particle Sampler <arXiv:1510.02451> for a Gaussian target and Student distribution.
Author: Joris Bierkens
Maintainer: Joris Bierkens <j.bierkens@vu.nl>
Diff between RZigZag versions 0.2.0 dated 2019-07-04 and 0.2.1 dated 2019-07-20
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- src/LogisticSampler.cpp | 4 ++-- 3 files changed, 8 insertions(+), 8 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-05-15 0.7.0
2015-12-31 0.4.2
2015-07-01 0.4.0
2014-08-20 0.3.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-11 0.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-28 1.2.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-07-18 1.1.4
2019-07-15 1.1.3
2019-05-24 1.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-18 0.1.6
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-08-11 0.5.0
2017-05-10 0.4.0
2015-10-07 0.3.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-05-17 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-04-16 0.2.0
2018-10-18 0.1.1
2018-08-05 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-17 1.2.0
2018-10-17 1.1.0
2018-08-17 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-05-24 0.9-12
2019-04-20 0.9-11
2018-12-18 0.9-7
2018-12-18 0.9-8
2018-07-07 0.9-5
2018-07-02 0.9-4
2018-04-18 0.9-3
2018-03-05 0.9-1
2018-03-03 0.9-0
Title: General Purpose Client for 'ERDDAP' Servers
Description: General purpose R client for 'ERDDAP' servers. Includes
functions to search for 'datasets', get summary information on
'datasets', and fetch 'datasets', in either 'csv' or 'netCDF' format.
'ERDDAP' information:
<https://upwell.pfeg.noaa.gov/erddap/information.html>.
Author: Scott Chamberlain [aut, cre] (<https://orcid.org/0000-0003-1444-9135>),
Ben Tupper [ctb],
Roy Mendelssohn [ctb]
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>
Diff between rerddap versions 0.6.4 dated 2019-07-01 and 0.6.5 dated 2019-07-20
rerddap-0.6.4/rerddap/inst/doc/rerddap_vignette.Rmd |only rerddap-0.6.4/rerddap/inst/doc/rerddap_vignette.html |only rerddap-0.6.4/rerddap/inst/vign/rerddap_vignette.Rmd |only rerddap-0.6.4/rerddap/inst/vign/rerddap_vignette.md |only rerddap-0.6.4/rerddap/vignettes/rerddap_vignette.Rmd |only rerddap-0.6.5/rerddap/DESCRIPTION | 6 +- rerddap-0.6.5/rerddap/MD5 | 27 +++++----- rerddap-0.6.5/rerddap/NEWS.md | 8 ++ rerddap-0.6.5/rerddap/build/vignette.rds |binary rerddap-0.6.5/rerddap/inst/doc/rerddap.Rmd |only rerddap-0.6.5/rerddap/inst/doc/rerddap.html |only rerddap-0.6.5/rerddap/inst/vign/rerddap.Rmd |only rerddap-0.6.5/rerddap/inst/vign/rerddap.md |only rerddap-0.6.5/rerddap/tests/testthat/test-convert_units.R | 5 + rerddap-0.6.5/rerddap/tests/testthat/test-griddap.r | 4 + rerddap-0.6.5/rerddap/tests/testthat/test-tabledap.R | 4 + rerddap-0.6.5/rerddap/tests/vcr_cassettes/convert_time.yml | 16 ++--- rerddap-0.6.5/rerddap/tests/vcr_cassettes/convert_units.yml | 16 ++--- rerddap-0.6.5/rerddap/tests/vcr_cassettes/convert_units_self.yml |only rerddap-0.6.5/rerddap/vignettes/rerddap.Rmd |only 20 files changed, 53 insertions(+), 33 deletions(-)
Title: Interpolate Munsell Renotation Data from Hue/Chroma to CIE/RGB
Description: Methods for interpolating data in the Munsell color system following the ASTM D-1535 standard. Hues and chromas with decimal values can be interpolated and converted to/from the Munsell color system and CIE xyY, CIE XYZ, CIE Lab, CIE Luv, or RGB. Includes ISCC-NBS color block lookup. Based on the work by Paul Centore, "The Munsell and Kubelka-Munk Toolbox".
Author: Jose Gama [aut, trl],
Paul Centore [aut, cph],
Glenn Davis [aut, cre]
Maintainer: Glenn Davis <gdavis@gluonics.com>
Diff between munsellinterpol versions 2.4-1 dated 2019-05-16 and 2.5-1 dated 2019-07-20
DESCRIPTION | 8 ++++---- MD5 | 16 ++++++++-------- NEWS.md | 4 ++++ build/vignette.rds |binary inst/doc/dental.html | 12 ++++++------ inst/doc/lightness.pdf |binary inst/doc/lociHC.pdf |binary inst/doc/munsellinterpol-guide.html | 12 ++++++------ tests/test-transforms.R | 5 ++++- 9 files changed, 32 insertions(+), 25 deletions(-)
More information about munsellinterpol at CRAN
Permanent link
Title: Fits Models Inside the Database
Description: Uses 'dplyr' and 'tidyeval' to fit statistical models inside the database. It currently supports KMeans and linear regression models.
Author: Edgar Ruiz [aut, cre]
Maintainer: Edgar Ruiz <edgar@rstudio.com>
Diff between modeldb versions 0.1.2 dated 2019-03-02 and 0.2.0 dated 2019-07-20
DESCRIPTION | 17 MD5 | 60 +- NAMESPACE | 89 +-- NEWS.md | 32 - R/as-parsed-model.R |only R/kmeans-viz.R | 234 ++++----- R/kmeans.R | 277 +++++----- R/lm.R | 453 ++++++++--------- R/model_prep.R | 94 +-- R/modeldb.R | 43 - README.md | 219 ++++---- build/vignette.rds |binary inst/doc/kmeans.R | 76 +- inst/doc/kmeans.Rmd | 182 +++---- inst/doc/kmeans.html | 789 +++++++++++++++--------------- inst/doc/linear-regression.R | 158 +++--- inst/doc/linear-regression.Rmd | 274 +++++----- inst/doc/linear-regression.html | 879 +++++++++++++++++----------------- man/add_dummy_variables.Rd | 76 +- man/as_parsed_model.modeldb_lm.Rd |only man/linear_regression_db.Rd | 80 +-- man/modeldb-package.Rd | 50 - man/plot_kmeans.Rd | 78 +-- man/reexports.Rd |only man/simple_kmeans_db.Rd | 93 +-- tests/testthat.R | 12 tests/testthat/test-as-parsed-model.R |only tests/testthat/test_dummy_var.R | 44 - tests/testthat/test_kmeans.R | 57 +- tests/testthat/test_kmeans_viz.R | 58 +- tests/testthat/test_lr.R | 164 +++--- vignettes/kmeans.Rmd | 182 +++---- vignettes/linear-regression.Rmd | 274 +++++----- 33 files changed, 2536 insertions(+), 2508 deletions(-)