Title: Nonlinear Nonparametric Statistics
Description: Nonlinear nonparametric statistics using partial moments. Partial moments are the elements of variance and asymptotically approximate the area of f(x). These robust statistics provide the basis for nonlinear analysis while retaining linear equivalences. NNS offers: Numerical integration, Numerical differentiation, Clustering, Correlation, Dependence, Causal analysis, ANOVA, Regression, Classification, Seasonality, Autoregressive modeling, Normalization and Stochastic dominance. All routines based on: Viole, F. and Nawrocki, D. (2013), Nonlinear Nonparametric Statistics: Using Partial Moments (ISBN: 1490523995).
Author: Fred Viole
Maintainer: Fred Viole <ovvo.financial.systems@gmail.com>
Diff between NNS versions 0.4.7 dated 2019-11-19 and 0.4.7.1 dated 2019-11-20
DESCRIPTION | 8 +-- MD5 | 88 +++++++++++++++++++++--------------------- R/ANOVA.R | 2 R/ARMA.R | 2 R/ARMA_optim.R | 2 R/Causation.R | 2 R/Correlation.R | 2 R/Dependence.R | 2 R/LPM_UPM_VaR.R | 2 R/NNS_VAR.R | 8 --- R/NNS_term_matrix.R | 2 R/Normalization.R | 2 R/Numerical_Differentiation.R | 2 R/Partial_Moments.R | 20 ++++----- R/Partition_Map.R | 2 R/Regression.R | 2 R/Seasonality_Test.R | 2 R/dy_d_wrt.R | 2 R/dy_dx.R | 2 man/Co.LPM.Rd | 2 man/Co.UPM.Rd | 2 man/D.LPM.Rd | 2 man/D.UPM.Rd | 2 man/LPM.Rd | 2 man/LPM.VaR.Rd | 2 man/LPM.ratio.Rd | 2 man/NNS.ANOVA.Rd | 2 man/NNS.ARMA.Rd | 2 man/NNS.ARMA.optim.Rd | 2 man/NNS.PDF.Rd | 2 man/NNS.VAR.Rd | 2 man/NNS.caus.Rd | 2 man/NNS.cor.Rd | 2 man/NNS.dep.Rd | 2 man/NNS.diff.Rd | 2 man/NNS.norm.Rd | 2 man/NNS.part.Rd | 2 man/NNS.reg.Rd | 2 man/NNS.seas.Rd | 2 man/NNS.term.matrix.Rd | 2 man/PM.matrix.Rd | 2 man/UPM.Rd | 2 man/UPM.ratio.Rd | 2 man/dy.d_.Rd | 2 man/dy.dx.Rd | 2 45 files changed, 101 insertions(+), 105 deletions(-)
Title: Finding Convergence Clubs
Description: Functions for clustering regions that form convergence clubs, according to the definition of Phillips and Sul (2009) <doi:10.1002/jae.1080>. A package description is available in Sichera and Pizzuto (2019).
Author: Roberto Sichera [aut, cre, cph],
Pietro Pizzuto [aut]
Maintainer: Roberto Sichera <rob.sichera@gmail.com>
Diff between ConvergenceClubs versions 1.4.3 dated 2018-12-14 and 2.2.1 dated 2019-11-20
DESCRIPTION | 16 MD5 | 68 +-- NAMESPACE | 7 R/ConvergenceClubs.R | 53 +- R/club.R | 173 ++++---- R/computeH.R | 132 +++--- R/coreG.R | 205 ++++----- R/countryGDP.R | 102 ++-- R/dim.convergence.clubs.R | 2 R/estimateMod.R | 164 +++---- R/findClubs.R | 517 +++++++++++++----------- R/mergeClubs.R | 422 ++++++++++---------- R/mergeDivergent.R | 328 +++++++-------- R/plot.convergence.clubs.R | 821 +++++++++++++++++++++++++-------------- R/print.convergence.clubs.R | 70 +-- R/ps_andrews_hac.R | 104 ++-- R/summary.convergence.clubs.R | 227 +++++----- R/utils.R |only README.md | 164 +++---- inst |only man/ConvergenceClubs-package.Rd | 96 ++-- man/GDP.Rd | 46 +- man/axis_marks.Rd |only man/club.Rd | 112 +++-- man/computeH.Rd | 100 ++-- man/coreG.Rd | 125 +++-- man/dim.convergence.clubs.Rd | 40 - man/estimateMod.Rd | 100 ++-- man/filteredGDP.Rd | 50 +- man/findClubs.Rd | 260 +++++++----- man/mergeClubs.Rd | 208 +++++---- man/mergeDivergent.Rd | 150 +++---- man/plot.convergence.clubs.Rd | 326 ++++++++++----- man/print.convergence.clubs.Rd | 30 - man/print_table.Rd |only man/ps_andrews_hac.Rd | 59 +- man/summary.convergence.clubs.Rd | 32 - 37 files changed, 2944 insertions(+), 2365 deletions(-)
More information about ConvergenceClubs at CRAN
Permanent link
Title: Uniform Sampling of Directed Acyclic Graphs
Description: Uniform sampling of Directed Acyclic Graphs (DAG) using exact
enumeration by relating each DAG to a sequence of outpoints (nodes with no
incoming edges) and then to a composition of integers as suggested by
Kuipers, J. and Moffa, G. (2015) <doi:10.1007/s11222-013-9428-y>.
Author: Markus Kalisch [aut, cre],
Manuel Schuerch [ctb]
Maintainer: Markus Kalisch <kalisch@stat.math.ethz.ch>
Diff between unifDAG versions 1.0.2 dated 2019-04-04 and 1.0.3 dated 2019-11-20
unifDAG-1.0.2/unifDAG/inst/doc/unifDAG-vignette.R |only unifDAG-1.0.3/unifDAG/DESCRIPTION | 8 +++--- unifDAG-1.0.3/unifDAG/MD5 | 12 +++++----- unifDAG-1.0.3/unifDAG/build/vignette.rds |binary unifDAG-1.0.3/unifDAG/inst/doc/unifDAG-vignette.pdf |binary unifDAG-1.0.3/unifDAG/man/unifDAG.Rd | 2 - unifDAG-1.0.3/unifDAG/vignettes/unifDAG-vignette-concordance.tex |only unifDAG-1.0.3/unifDAG/vignettes/unifDAG-vignette.synctex.gz |only unifDAG-1.0.3/unifDAG/vignettes/unifDAG-vignette.tex |only 9 files changed, 12 insertions(+), 10 deletions(-)
Title: Display Resizable Plots
Description: Display a plot in a Tk canvas.
Author: Filipe Campelo
Maintainer: Filipe Campelo <fcampelo@ci.uc.pt>
Diff between tkRplotR versions 0.1.1 dated 2018-02-23 and 0.1.2 dated 2019-11-20
tkRplotR-0.1.1/tkRplotR/man/getCoef.Rd |only tkRplotR-0.1.2/tkRplotR/DESCRIPTION | 10 tkRplotR-0.1.2/tkRplotR/MD5 | 17 tkRplotR-0.1.2/tkRplotR/NAMESPACE | 11 tkRplotR-0.1.2/tkRplotR/R/functions.R | 728 +++++++++++++++++++---------- tkRplotR-0.1.2/tkRplotR/R/zzz.R |only tkRplotR-0.1.2/tkRplotR/man/addTkBind.Rd | 2 tkRplotR-0.1.2/tkRplotR/man/setCoef.Rd |only tkRplotR-0.1.2/tkRplotR/man/setVariable.Rd | 2 tkRplotR-0.1.2/tkRplotR/man/tkBinds.Rd | 2 tkRplotR-0.1.2/tkRplotR/man/tkRplot.Rd | 42 - 11 files changed, 531 insertions(+), 283 deletions(-)
Title: 'NOAA' Weather Data from R
Description: Client for many 'NOAA' data sources including the 'NCDC' climate
'API' at <https://www.ncdc.noaa.gov/cdo-web/webservices/v2>, with functions for
each of the 'API' 'endpoints': data, data categories, data sets, data types,
locations, location categories, and stations. In addition, we have an interface
for 'NOAA' sea ice data, the 'NOAA' severe weather inventory, 'NOAA' Historical
Observing 'Metadata' Repository ('HOMR') data, 'NOAA' storm data via 'IBTrACS',
tornado data via the 'NOAA' storm prediction center, and more.
Author: Scott Chamberlain [aut, cre],
Brooke Anderson [ctb],
Maëlle Salmon [ctb],
Adam Erickson [ctb],
Nicholas Potter [ctb],
Joseph Stachelek [ctb],
Alex Simmons [ctb],
Karthik Ram [ctb],
Hart Edmund [ctb]
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>
Diff between rnoaa versions 0.9.4 dated 2019-11-07 and 0.9.5 dated 2019-11-20
rnoaa-0.9.4/rnoaa/R/gefs.R |only rnoaa-0.9.4/rnoaa/man/gefs.Rd |only rnoaa-0.9.4/rnoaa/tests/testthat/test-gefs.R |only rnoaa-0.9.5/rnoaa/DESCRIPTION | 6 rnoaa-0.9.5/rnoaa/MD5 | 80 +++++----- rnoaa-0.9.5/rnoaa/NEWS.md | 9 + rnoaa-0.9.5/rnoaa/R/buoy.R | 12 + rnoaa-0.9.5/rnoaa/R/defunct.R | 82 ++++++++++ rnoaa-0.9.5/rnoaa/R/ghcnd.R | 3 rnoaa-0.9.5/rnoaa/R/homr.R | 1 rnoaa-0.9.5/rnoaa/R/isd.R | 42 ++--- rnoaa-0.9.5/rnoaa/R/lcd.R | 133 ++--------------- rnoaa-0.9.5/rnoaa/inst/doc/buoy_vignette.R | 2 rnoaa-0.9.5/rnoaa/inst/doc/buoy_vignette.html | 4 rnoaa-0.9.5/rnoaa/inst/doc/homr_vignette.R | 2 rnoaa-0.9.5/rnoaa/inst/doc/homr_vignette.html | 4 rnoaa-0.9.5/rnoaa/inst/doc/ncdc_attributes.R | 2 rnoaa-0.9.5/rnoaa/inst/doc/ncdc_attributes.html | 4 rnoaa-0.9.5/rnoaa/inst/doc/ncdc_vignette.R | 2 rnoaa-0.9.5/rnoaa/inst/doc/ncdc_vignette.html | 4 rnoaa-0.9.5/rnoaa/inst/doc/ncdc_workflow.R | 2 rnoaa-0.9.5/rnoaa/inst/doc/ncdc_workflow.html | 4 rnoaa-0.9.5/rnoaa/inst/doc/rnoaa_ropenaq.R | 2 rnoaa-0.9.5/rnoaa/inst/doc/rnoaa_ropenaq.html | 4 rnoaa-0.9.5/rnoaa/inst/doc/seaice_vignette.R | 2 rnoaa-0.9.5/rnoaa/inst/doc/seaice_vignette.html | 4 rnoaa-0.9.5/rnoaa/inst/doc/storms_vignette.R | 2 rnoaa-0.9.5/rnoaa/inst/doc/storms_vignette.html | 4 rnoaa-0.9.5/rnoaa/inst/doc/swdi_vignette.R | 2 rnoaa-0.9.5/rnoaa/inst/doc/swdi_vignette.html | 4 rnoaa-0.9.5/rnoaa/man/argo.Rd | 4 rnoaa-0.9.5/rnoaa/man/buoy.Rd | 12 + rnoaa-0.9.5/rnoaa/man/gefs-defunct.Rd |only rnoaa-0.9.5/rnoaa/man/gefs_dimension_values-defunct.Rd |only rnoaa-0.9.5/rnoaa/man/gefs_dimensions-defunct.Rd |only rnoaa-0.9.5/rnoaa/man/gefs_ensembles-defunct.Rd |only rnoaa-0.9.5/rnoaa/man/gefs_latitudes-defunct.Rd |only rnoaa-0.9.5/rnoaa/man/gefs_longitudes-defunct.Rd |only rnoaa-0.9.5/rnoaa/man/gefs_times-defunct.Rd |only rnoaa-0.9.5/rnoaa/man/gefs_variables-defunct.Rd |only rnoaa-0.9.5/rnoaa/man/ghcnd.Rd | 3 rnoaa-0.9.5/rnoaa/man/homr.Rd | 1 rnoaa-0.9.5/rnoaa/man/isd.Rd | 42 ++--- rnoaa-0.9.5/rnoaa/man/lcd.Rd | 72 ++------- rnoaa-0.9.5/rnoaa/man/lcd_cleanup-defunct.Rd |only rnoaa-0.9.5/rnoaa/man/rnoaa-defunct.Rd | 17 ++ rnoaa-0.9.5/rnoaa/tests/testthat/test-lcd.R | 24 --- 47 files changed, 288 insertions(+), 309 deletions(-)
Title: Credible Visualization for Two-Dimensional Projections of Data
Description: Projections are common dimensionality reduction methods, which represent high-dimensional data in a two-dimensional space. However, when restricting the output space to two dimensions, which results in a two dimensional scatter plot (projection) of the data, low dimensional similarities do not represent high dimensional distances coercively [Thrun, 2018]. This could lead to a misleading interpretation of the underlying structures [Thrun, 2018]. By means of the 3D topographic map the generalized Umatrix is able to depict errors of these two-dimensional scatter plots. The package is based on the book of Thrun, M.C.: "Projection Based Clustering through Self-Organization and Swarm Intelligence" (2018) <DOI:10.1007/978-3-658-20540-9>.
Author: Michael Thrun [aut, cre, cph],
Alfred Ultsch [ths]
Maintainer: Michael Thrun <m.thrun@gmx.net>
Diff between GeneralizedUmatrix versions 1.1.5 dated 2019-02-03 and 1.1.6 dated 2019-11-20
DESCRIPTION | 8 MD5 | 28 +- NAMESPACE | 8 R/CalcUstarmatrix.R |only R/DefaultColorSequence.R |only R/plotTopographicMap.R | 50 ++++- R/setdiffMatrix.R |only build/partial.rdb |binary build/vignette.rds |binary inst/doc/GeneralizedUmatrix.R | 56 +++-- inst/doc/GeneralizedUmatrix.Rmd | 122 +++++++----- inst/doc/GeneralizedUmatrix.html | 386 +++++++++++++++++++++++++-------------- man/CalcUstarmatrix.Rd |only man/GeneralizedUmatrix.Rd | 2 man/addRowWiseC.Rd |only man/plotTopographicMap.Rd | 11 - man/setdiffMatrix.Rd |only vignettes/GeneralizedUmatrix.Rmd | 122 +++++++----- 18 files changed, 510 insertions(+), 283 deletions(-)
More information about GeneralizedUmatrix at CRAN
Permanent link
Title: Fuzzy Logic Toolkit for R
Description: Design and simulate fuzzy logic systems using Type-1 and Interval Type-2 Fuzzy Logic.
This toolkit includes with graphical user interface (GUI) and an adaptive neuro-
fuzzy inference system (ANFIS). This toolkit is a continuation from the previous
package ('FuzzyToolkitUoN'). Produced by the Intelligent Modelling & Analysis Group (IMA)
and Lab for UnCertainty In Data and decision making (LUCID), University of Nottingham.
Author: Chao Chen, Jon Garibaldi, Tajul Razak
Maintainer: Chao Chen <fuzzyr@cs.nott.ac.uk>
Diff between FuzzyR versions 2.2 dated 2019-11-12 and 2.3 dated 2019-11-20
DESCRIPTION | 6 MD5 | 9 NAMESPACE | 1 NEWS.md | 13 R/FuzzyInferenceSystem.R | 4735 ++++++++++++++++++++++++----------------------- man/tipper.tsk.Rd |only 6 files changed, 2481 insertions(+), 2283 deletions(-)
Title: Finding Heterogeneous Treatment Effects
Description: The heterogeneous treatment effect estimation procedure
proposed by Imai and Ratkovic (2013)<DOI: 10.1214/12-AOAS593>.
The proposed method is applicable, for
example, when selecting a small number of most (or least)
efficacious treatments from a large number of alternative
treatments as well as when identifying subsets of the
population who benefit (or are harmed by) a treatment of
interest. The method adapts the Support Vector Machine
classifier by placing separate LASSO constraints over the
pre-treatment parameters and causal heterogeneity parameters of
interest. This allows for the qualitative distinction between
causal and other parameters, thereby making the variable
selection suitable for the exploration of causal heterogeneity.
The package also contains a class of functions, CausalANOVA,
which estimates the average marginal interaction effects (AMIEs)
by a regularized ANOVA as proposed by Egami and Imai (2019)<DOI:10.1080/01621459.2018.1476246>.
It contains a variety of regularization techniques to facilitate
analysis of large factorial experiments.
Author: Naoki Egami, Marc Ratkovic, Kosuke Imai
Maintainer: Naoki Egami <negami@princeton.edu>
Diff between FindIt versions 1.1.4 dated 2018-04-11 and 1.2.0 dated 2019-11-20
FindIt-1.1.4/FindIt/R/ScreenINT.R |only FindIt-1.1.4/FindIt/src |only FindIt-1.2.0/FindIt/DESCRIPTION | 23 FindIt-1.2.0/FindIt/MD5 | 84 FindIt-1.2.0/FindIt/NAMESPACE | 64 FindIt-1.2.0/FindIt/R/CausalANOVA.R | 19 FindIt-1.2.0/FindIt/R/CoefExtract.R | 4 FindIt-1.2.0/FindIt/R/Collapsing.R | 5 FindIt-1.2.0/FindIt/R/ConditionalEffect.R | 7 FindIt-1.2.0/FindIt/R/CreateANOVAconst.R | 4 FindIt-1.2.0/FindIt/R/CreateCoef.R | 5 FindIt-1.2.0/FindIt/R/CreateWeights.R | 5 FindIt-1.2.0/FindIt/R/CreatelevelIndex.R | 12 FindIt-1.2.0/FindIt/R/FindIt-package.R | 50 FindIt-1.2.0/FindIt/R/FullVCOV.R | 12 FindIt-1.2.0/FindIt/R/Glsei.R | 322 +-- FindIt-1.2.0/FindIt/R/Lcombinefunction.R | 9 FindIt-1.2.0/FindIt/R/PsyConstraintCombine.R | 12 FindIt-1.2.0/FindIt/R/SVMHet.R | 2420 ++++++++++++------------- FindIt-1.2.0/FindIt/R/SceenINT.R |only FindIt-1.2.0/FindIt/R/Zcombinefunction.R | 8 FindIt-1.2.0/FindIt/R/cv.CausalANOVA.R | 15 FindIt-1.2.0/FindIt/R/indTwo2Three.R | 1 FindIt-1.2.0/FindIt/R/lengthSlack.R | 4 FindIt-1.2.0/FindIt/R/makeallway.R | 172 - FindIt-1.2.0/FindIt/R/plot.CausalANOVA.R | 42 FindIt-1.2.0/FindIt/R/plot.PredictEffect.R | 2 FindIt-1.2.0/FindIt/R/plot.cv.CausalANOVA.R | 6 FindIt-1.2.0/FindIt/R/predict.FindIt.R | 2 FindIt-1.2.0/FindIt/R/stab.CausalANOVA.R | 6 FindIt-1.2.0/FindIt/R/summary.CausalANOVA.R | 12 FindIt-1.2.0/FindIt/R/summary.FindIt.R | 7 FindIt-1.2.0/FindIt/R/test.CausalANOVA.R | 8 FindIt-1.2.0/FindIt/man/Carlson.Rd | 2 FindIt-1.2.0/FindIt/man/CausalANOVA.Rd | 40 FindIt-1.2.0/FindIt/man/ConditionalEffect.Rd | 17 FindIt-1.2.0/FindIt/man/FindIt-package.Rd |only FindIt-1.2.0/FindIt/man/FindIt.Rd | 34 FindIt-1.2.0/FindIt/man/cv.CausalANOVA.Rd | 34 FindIt-1.2.0/FindIt/man/plot.CausalANOVA.Rd |only FindIt-1.2.0/FindIt/man/plot.PredictFindIt.Rd | 1 FindIt-1.2.0/FindIt/man/predict.FindIt.Rd | 12 FindIt-1.2.0/FindIt/man/summary.CausalANOVA.Rd |only FindIt-1.2.0/FindIt/man/summary.FindIt.Rd |only FindIt-1.2.0/FindIt/man/test.CausalANOVA.Rd | 16 45 files changed, 1648 insertions(+), 1850 deletions(-)
Title: Quickly Create Elegant Regression Results Tables and Plots when
Modelling
Description: Generate regression results tables and plots in final
format for publication. Explore models and export directly to PDF
and 'Word' using 'RMarkdown'.
Author: Ewen Harrison [aut, cre],
Tom Drake [aut],
Riinu Ots [aut]
Maintainer: Ewen Harrison <ewen.harrison@ed.ac.uk>
Diff between finalfit versions 0.9.5 dated 2019-09-10 and 0.9.6 dated 2019-11-20
DESCRIPTION | 14 MD5 | 104 - NAMESPACE | 10 NEWS.md | 15 R/boot_compare.R | 4 R/boot_predict.R | 6 R/check_recode.R |only R/ff_column_totals.R |only R/ff_glimpse.R | 7 R/ff_merge.R | 39 R/ff_permute.R | 2 R/ff_remove_ref.R | 92 + R/finalfit.R | 24 R/finalfit_internal_functions.R | 33 R/fit2df.R | 50 R/glmmulti.R | 2 R/or_plot.R | 6 R/summaryfactorlist.R | 38 build/vignette.rds |binary inst/doc/all_tables_examples.R | 71 - inst/doc/all_tables_examples.Rmd | 123 + inst/doc/all_tables_examples.html | 2525 ++++++++++++++++++++----------------- inst/doc/bootstrap.R | 2 inst/doc/bootstrap.Rmd | 4 inst/doc/bootstrap.html | 36 inst/doc/data_prep.html | 6 inst/doc/export.html | 172 +- inst/doc/finalfit.html | 262 +-- inst/doc/missing.R | 38 inst/doc/missing.Rmd | 38 inst/doc/missing.html | 347 ++--- inst/doc/survival.R | 14 inst/doc/survival.Rmd | 14 inst/doc/survival.html | 98 - man/boot_compare.Rd | 2 man/boot_predict.Rd | 6 man/check_recode.Rd |only man/extract_fit.Rd | 2 man/ff_column_totals.Rd |only man/ff_merge.Rd | 39 man/ff_percent_only.Rd |only man/ff_remove_p.Rd |only man/ff_remove_ref.Rd | 23 man/ff_row_totals.Rd |only man/finalfit.Rd | 30 man/fit2df.Rd | 14 man/summarise_continuous.Rd | 2 man/summary_factorlist.Rd | 6 man/summary_factorlist0.Rd | 4 man/summary_factorlist_groups.Rd | 4 man/summary_mipo.Rd |only tests/testthat/test_check_recode.R |only tests/testthat/test_ffs.R |only tests/testthat/test_internals.R | 7 vignettes/all_tables_examples.Rmd | 123 + vignettes/bootstrap.Rmd | 4 vignettes/missing.Rmd | 38 vignettes/survival.Rmd | 14 58 files changed, 2633 insertions(+), 1881 deletions(-)
Title: Gaussian Process Regression Models with Linear Inequality
Constraints
Description: Gaussian processes regression models with linear inequality constraints
(Lopez-Lopera et al., 2018) <doi:10.1137/17M1153157>.
Author: Andres Felipe LOPEZ-LOPERA
Maintainer: Andres Felipe LOPEZ-LOPERA <andres-felipe.lopez@emse.fr>
Diff between lineqGPR versions 0.0.4 dated 2019-06-11 and 0.1.0 dated 2019-11-20
lineqGPR-0.0.4/lineqGPR/R/lineqDGP.R |only lineqGPR-0.0.4/lineqGPR/man/augment.lineqDGP.Rd |only lineqGPR-0.0.4/lineqGPR/man/basisCompute.lineqDGP.Rd |only lineqGPR-0.0.4/lineqGPR/man/create.lineqDGP.Rd |only lineqGPR-0.0.4/lineqGPR/man/ineqConstrKernCompute.Rd |only lineqGPR-0.0.4/lineqGPR/man/lineqDGPSys.Rd |only lineqGPR-0.0.4/lineqGPR/man/plot.lineqDGP.Rd |only lineqGPR-0.0.4/lineqGPR/man/predict.lineqDGP.Rd |only lineqGPR-0.0.4/lineqGPR/man/simulate.lineqDGP.Rd |only lineqGPR-0.1.0/lineqGPR/DESCRIPTION | 12 lineqGPR-0.1.0/lineqGPR/MD5 | 98 lineqGPR-0.1.0/lineqGPR/NAMESPACE | 115 - lineqGPR-0.1.0/lineqGPR/R/lineqAGP.R |only lineqGPR-0.1.0/lineqGPR/R/lineqGP.R | 71 lineqGPR-0.1.0/lineqGPR/R/lineqGPlikelihoods.R | 1339 ++++++++----- lineqGPR-0.1.0/lineqGPR/R/lineqGPsamplers.R | 134 + lineqGPR-0.1.0/lineqGPR/R/lineqGPutils.R | 42 lineqGPR-0.1.0/lineqGPR/build/partial.rdb |binary lineqGPR-0.1.0/lineqGPR/demo/00Index | 1 lineqGPR-0.1.0/lineqGPR/demo/demToyLineqAGP_Monotonicity.R |only lineqGPR-0.1.0/lineqGPR/man/augment.lineqAGP.Rd |only lineqGPR-0.1.0/lineqGPR/man/augment.lineqGP.Rd | 120 - lineqGPR-0.1.0/lineqGPR/man/basisCompute.lineqAGP.Rd |only lineqGPR-0.1.0/lineqGPR/man/basisCompute.lineqGP.Rd | 100 lineqGPR-0.1.0/lineqGPR/man/bounds2lineqSys.Rd | 98 lineqGPR-0.1.0/lineqGPR/man/constrlogLikFun.Rd | 132 - lineqGPR-0.1.0/lineqGPR/man/constrlogLikGrad.Rd | 142 - lineqGPR-0.1.0/lineqGPR/man/create.Rd | 74 lineqGPR-0.1.0/lineqGPR/man/create.lineqAGP.Rd |only lineqGPR-0.1.0/lineqGPR/man/create.lineqGP.Rd | 108 - lineqGPR-0.1.0/lineqGPR/man/errorMeasureRegress.Rd | 176 - lineqGPR-0.1.0/lineqGPR/man/errorMeasureRegressMC.Rd | 146 - lineqGPR-0.1.0/lineqGPR/man/ggplot.lineqDGP.Rd | 56 lineqGPR-0.1.0/lineqGPR/man/ggplot.lineqGP.Rd | 116 - lineqGPR-0.1.0/lineqGPR/man/k1exponential.Rd | 68 lineqGPR-0.1.0/lineqGPR/man/k1gaussian.Rd | 68 lineqGPR-0.1.0/lineqGPR/man/k1matern32.Rd | 68 lineqGPR-0.1.0/lineqGPR/man/k1matern52.Rd | 68 lineqGPR-0.1.0/lineqGPR/man/k2gaussian.Rd | 70 lineqGPR-0.1.0/lineqGPR/man/kernCompute.Rd | 74 lineqGPR-0.1.0/lineqGPR/man/lineqAGPSys.Rd |only lineqGPR-0.1.0/lineqGPR/man/lineqGPOptim.Rd | 126 - lineqGPR-0.1.0/lineqGPR/man/lineqGPR-package.Rd | 6 lineqGPR-0.1.0/lineqGPR/man/lineqGPSys.Rd | 128 - lineqGPR-0.1.0/lineqGPR/man/logLikAdditiveFun.Rd |only lineqGPR-0.1.0/lineqGPR/man/logLikAdditiveGrad.Rd |only lineqGPR-0.1.0/lineqGPR/man/logLikFun.Rd | 78 lineqGPR-0.1.0/lineqGPR/man/logLikGrad.Rd | 78 lineqGPR-0.1.0/lineqGPR/man/plot.lineqAGP.Rd |only lineqGPR-0.1.0/lineqGPR/man/plot.lineqGP.Rd | 76 lineqGPR-0.1.0/lineqGPR/man/predict.lineqAGP.Rd |only lineqGPR-0.1.0/lineqGPR/man/predict.lineqGP.Rd | 148 - lineqGPR-0.1.0/lineqGPR/man/simulate.lineqAGP.Rd |only lineqGPR-0.1.0/lineqGPR/man/simulate.lineqGP.Rd | 166 - lineqGPR-0.1.0/lineqGPR/man/splitDoE.Rd | 124 - lineqGPR-0.1.0/lineqGPR/man/tmvrnorm.ExpT.Rd | 104 - lineqGPR-0.1.0/lineqGPR/man/tmvrnorm.Gibbs.Rd | 100 lineqGPR-0.1.0/lineqGPR/man/tmvrnorm.HMC.Rd | 104 - lineqGPR-0.1.0/lineqGPR/man/tmvrnorm.RSM.Rd | 104 - lineqGPR-0.1.0/lineqGPR/man/tmvrnorm.Rd | 64 60 files changed, 2728 insertions(+), 2174 deletions(-)
Title: Hypothesis Matrix Translation
Description: Translation between experimental null hypotheses, hypothesis matrices, and contrast matrices as used in linear regression models. The package is based on the method described in Schad, Vasishth, Hohenstein, and Kliegl (2019) <doi:10.1016/j.jml.2019.104038>.
Author: Maximilian M. Rabe [aut, cre],
Shravan Vasishth [aut],
Sven Hohenstein [aut],
Reinhold Kliegl [aut],
Daniel J. Schad [aut]
Maintainer: Maximilian M. Rabe <maximilian.rabe@uni-potsdam.de>
Diff between hypr versions 0.1.3 dated 2019-10-18 and 0.1.4 dated 2019-11-20
DESCRIPTION | 6 ++-- MD5 | 24 +++++++++---------- R/equations.R | 2 + README.md | 5 +++ inst/CITATION | 52 +++++++++++++++++++++-------------------- inst/doc/hypr-intro.R | 8 +++++- inst/doc/hypr-intro.Rmd | 20 ++++++++++++++- inst/doc/hypr-intro.html | 53 ++++++++++++++++++++++++++++++++++++++++-- inst/doc/hypr-regression.R | 9 +++---- inst/doc/hypr-regression.Rmd | 18 ++++++-------- inst/doc/hypr-regression.html | 51 +++++++++++++++++++--------------------- vignettes/hypr-intro.Rmd | 20 ++++++++++++++- vignettes/hypr-regression.Rmd | 18 ++++++-------- 13 files changed, 187 insertions(+), 99 deletions(-)
Title: Psychometric Functions from the Waller Lab
Description: Computes fungible coefficients and Monte Carlo data. Underlying theory for these functions is described in the following publications:
Waller, N. (2008). Fungible Weights in Multiple Regression. Psychometrika, 73(4), 691-703, <DOI:10.1007/s11336-008-9066-z>.
Waller, N. & Jones, J. (2009). Locating the Extrema of Fungible Regression Weights.
Psychometrika, 74(4), 589-602, <DOI:10.1007/s11336-008-9087-7>.
Waller, N. G. (2016). Fungible Correlation Matrices:
A Method for Generating Nonsingular, Singular, and Improper Correlation Matrices for
Monte Carlo Research. Multivariate Behavioral Research, 51(4), 554-568, <DOI:10.1080/00273171.2016.1178566>.
Jones, J. A. & Waller, N. G. (2015). The normal-theory and asymptotic distribution-free (ADF)
covariance matrix of standardized regression coefficients: theoretical extensions
and finite sample behavior. Psychometrika, 80, 365-378, <DOI:10.1007/s11336-013-9380-y>.
Waller, N. G. (2018). Direct Schmid-Leiman transformations and rank-deficient loadings matrices. Psychometrika, 83, 858-870. <DOI:10.1007/s11336-017-9599-0>.
Author: Niels Waller [aut, cre],
Jeff Jones [ctb],
Casey Giordano [ctb]
Maintainer: Niels Waller <nwaller@umn.edu>
Diff between fungible versions 1.92 dated 2019-10-14 and 1.93 dated 2019-11-20
DESCRIPTION | 10 ++-- MD5 | 105 ++++++++++++++++++++++++------------------------- R/BiFAD.R | 12 +---- R/SLi.R | 30 +++++--------- R/SchmidLeiman.R | 36 ++++++---------- R/faScores.R | 2 R/faSort.R | 101 +++++++++++++++++++++++++++++------------------ R/faX.R | 15 ++----- R/fapa.R | 13 +----- R/promaxQ.R | 18 ++------ R/simFA.R | 1 R/smoothAPA.R | 2 R/smoothBY.R | 3 + R/smoothKB.R | 2 R/smoothLG.R | 5 +- R/summary.faMain.R | 34 ++++++++------- inst/CITATION | 4 - inst/news |only man/BiFAD.Rd | 46 ++++++++++++++------- man/Box26.Rd | 30 +++++++++----- man/GenerateBoxData.Rd | 51 ++++++++++++++++------- man/Ledermann.Rd | 30 +++++++++----- man/RnpdMAP.Rd | 14 +++++- man/SLi.Rd | 53 ++++++++++++++++-------- man/SchmidLeiman.Rd | 53 ++++++++++++++---------- man/eap.Rd | 3 - man/eigGen.Rd | 3 - man/faAlign.Rd | 30 +++++++++----- man/faEKC.Rd | 30 +++++++++----- man/faMain.Rd | 53 +++++++++++++++++------- man/faScores.Rd | 39 ++++++++++++------ man/faSort.Rd | 33 +++++++++------ man/faStandardize.Rd | 30 +++++++++----- man/faX.Rd | 36 +++++++++------- man/fals.Rd | 30 +++++++++----- man/fapa.Rd | 41 ++++++++++++------- man/fareg.Rd | 30 +++++++++----- man/fungibleExtrema.Rd | 8 +-- man/fungibleL.Rd | 12 ++++- man/gen4PMData.Rd | 11 ++++- man/genFMPData.Rd | 3 - man/irf.Rd | 12 ++++- man/monte.Rd | 18 ++++++-- man/orderFactors.Rd | 30 +++++++++----- man/print.faMain.Rd | 30 +++++++++----- man/promaxQ.Rd | 47 ++++++++++++++------- man/seBeta.Rd | 14 +++++- man/seBetaFixed.Rd | 11 ++++- man/simFA.Rd | 17 ++++++- man/smoothAPA.Rd | 3 - man/smoothLG.Rd | 10 +++- man/summary.faMain.Rd | 43 ++++++++++++++------ man/summary.monte.Rd | 9 +++- man/tetcor.Rd | 11 ++++- 54 files changed, 823 insertions(+), 494 deletions(-)
Title: Boosted Multivariate Trees for Longitudinal Data
Description: Implements Friedman's gradient descent boosting algorithm for modeling of continuous or binary longitudinal response using multivariate tree base learners. A time-covariate interaction effect is modeled using penalized B-splines (P-splines) with estimated adaptive smoothing parameter.
Author: Hemant Ishwaran <hemant.ishwaran@gmail.com>, Amol Pande <amoljpande@gmail.com>
Maintainer: Udaya B. Kogalur <ubk@kogalur.com>
Diff between boostmtree versions 1.3.0 dated 2018-08-13 and 1.4.0 dated 2019-11-20
DESCRIPTION | 16 - MD5 | 58 +++-- NAMESPACE | 3 R/boostmtree.R | 412 +++++++++++++++++++---------------------- R/boostmtree.news.R | 13 - R/generic.predict.boostmtree.R | 214 +++++++-------------- R/marginalPlot.R | 81 ++++---- R/partialPlot.R | 82 +++++--- R/plot.boostmtree.R | 13 - R/predict.boostmtree.R | 32 +-- R/print.boostmtree.R | 17 + R/simLong.R | 45 +++- R/utilities.R | 182 +++++++++++++----- R/vimp.boostmtree.R |only R/vimpPlot.R | 63 ++---- R/zzz.R | 13 - data/AF.RData |only data/spirometry.RData |binary inst/CITATION | 2 inst/NEWS | 11 - man/AF.Rd |only man/boostmtree.Rd | 122 +++++++----- man/boostmtree.news.Rd | 2 man/boostmtree_package.Rd | 5 man/marginalPlot.Rd | 99 ++++++--- man/partialPlot.Rd | 69 ++++-- man/plot.boostmtree.Rd | 2 man/predict.boostmtree.Rd | 94 ++++++--- man/print.boostmtree.Rd | 2 man/simLong.Rd | 58 +++-- man/vimp.boostmtree.Rd |only man/vimpPlot.Rd | 35 ++- 32 files changed, 980 insertions(+), 765 deletions(-)
More information about MazamaLocationUtils at CRAN
Permanent link
Title: Generalized Eigenvalues and QZ Decomposition
Description: Generalized eigenvalues and eigenvectors
use QZ decomposition (generalized Schur decomposition).
The decomposition needs an N-by-N non-symmetric
matrix A or paired matrices (A,B) with eigenvalues reordering
mechanism. The decomposition functions are mainly based Fortran
subroutines in complex*16 and double precision of LAPACK
library (version 3.4.2. or later).
Author: Wei-Chen Chen [aut, cre],
LAPACK authors [aut, cph]
Maintainer: Wei-Chen Chen <wccsnow@gmail.com>
Diff between QZ versions 0.1-7 dated 2019-06-05 and 0.1-8 dated 2019-11-20
ChangeLog | 7 ++++ DESCRIPTION | 8 ++-- MD5 | 76 +++++++++++++++++++++++----------------------- R/qz_dgees.r | 4 +- R/qz_dtgsen.r | 8 ++-- R/qz_dtrsen.r | 4 +- R/qz_zgees.r | 4 +- R/qz_ztgsen.r | 8 ++-- R/qz_ztrsen.r | 4 +- configure | 21 ++++++++++++ configure.ac | 11 ++++++ inst/ex_verify/run_all.sh | 31 ++++++++++++++++++ src/Makevars.in | 2 + src/Makevars.win | 2 + src/R_dgees.c | 12 +++---- src/R_dgeev.c | 12 +++---- src/R_dgges.c | 16 ++++----- src/R_dggev.c | 12 +++---- src/R_dtgsen.c | 6 +-- src/R_dtrsen.c | 24 +++++++------- src/R_qz_global.h | 24 +++++++------- src/R_zgees.c | 12 +++---- src/R_zgeev.c | 12 +++---- src/R_zgges.c | 16 ++++----- src/R_zggev.c | 12 +++---- src/R_ztgsen.c | 6 +-- src/R_ztrsen.c | 24 +++++++------- src/wdgees.f | 22 +++++++++---- src/wdgeev.f | 12 +++---- src/wdgges.f | 26 ++++++++++----- src/wdggev.f | 12 +++---- src/wdtgsen.f |only src/wdtrsen.f | 31 ++++++++++++------ src/wzgees.f | 22 +++++++++---- src/wzgeev.f | 12 +++---- src/wzgges.f | 26 ++++++++++----- src/wzggev.f | 13 ++++--- src/wztgsen.f |only src/wztrsen.f | 32 ++++++++++++------- src/zzz.h | 16 ++++----- 40 files changed, 369 insertions(+), 233 deletions(-)
Title: Joint Frailty-Copula Models for Tumour Progression and Death in
Meta-Analysis
Description: Perform likelihood estimation and dynamic prediction under
joint frailty-copula models for tumour progression and death in meta-analysis.
A penalized likelihood method is employed for estimating model parameters, where the baseline hazard functions are modeled by smoothing splines.
The methods are applicable for meta-analytic data combining several studies.
The methods can analyze data having information on both terminal event time (e.g., time-to-death) and non-terminal event time (e.g., time-to-tumour progression).
See Emura et al. (2017) <doi:10.1177/0962280215604510> for likelihood estimation, and
Emura et al. (2018) <doi:10.1177/0962280216688032> for dynamic prediction.
More details on these methods can also be found in a book of Emura et al. (2019) <doi:10.1007/978-981-13-3516-7>.
Survival data from ovarian cancer patients are also available.
Author: Takeshi Emura
Maintainer: Takeshi Emura <takeshiemura@gmail.com>
Diff between joint.Cox versions 3.6 dated 2019-09-17 and 3.7 dated 2019-11-20
joint.Cox-3.6/joint.Cox/R/jointCox.reg1.R |only joint.Cox-3.6/joint.Cox/man/jointCox.reg1.Rd |only joint.Cox-3.7/joint.Cox/DESCRIPTION | 8 ++--- joint.Cox-3.7/joint.Cox/MD5 | 16 +++++------ joint.Cox-3.7/joint.Cox/R/condCox.reg.R |only joint.Cox-3.7/joint.Cox/man/I.spline.Rd | 30 ++++++++++++++-------- joint.Cox-3.7/joint.Cox/man/M.spline.Rd | 30 ++++++++++++++-------- joint.Cox-3.7/joint.Cox/man/cmprskCox.reg.Rd | 7 ++--- joint.Cox-3.7/joint.Cox/man/condCox.reg.Rd |only joint.Cox-3.7/joint.Cox/man/joint.Cox-package.Rd | 9 ++++-- joint.Cox-3.7/joint.Cox/man/splineCox.reg.Rd | 31 ++++++++++++++++------- 11 files changed, 83 insertions(+), 48 deletions(-)
Title: Handling Missing Values with Multivariate Data Analysis
Description: Imputation of incomplete continuous or categorical datasets; Missing values are imputed with a principal component analysis (PCA), a multiple correspondence analysis (MCA) model or a multiple factor analysis (MFA) model; Perform multiple imputation with and in PCA or MCA.
Author: Francois Husson, Julie Josse
Maintainer: Francois Husson <husson@agrocampus-ouest.fr>
Diff between missMDA versions 1.14 dated 2019-01-23 and 1.15 dated 2019-11-20
DESCRIPTION | 10 - MD5 | 49 ++++----- R/estim_ncpFAMD.R | 8 - R/estim_ncpMCA.R | 8 - R/estim_ncpPCA.R | 8 - R/imputeCA.r | 33 ++++-- R/imputeFAMD.R | 5 R/imputeMCA.R | 245 +++++++++++++++++++++++++++++------------------- R/imputeMFA.R | 197 ++++++++++++++++---------------------- R/imputePCA.R | 32 +++++- R/plot.MIPCA.R | 3 README.md |only build/vignette.rds |binary man/MIFAMD.Rd | 1 man/MIMCA.Rd | 1 man/MIPCA.Rd | 1 man/estim_ncpFAMD.Rd | 6 - man/estim_ncpMCA.Rd | 7 - man/estim_ncpPCA.Rd | 6 - man/imputeCA.Rd | 8 + man/imputeFAMD.Rd | 8 + man/imputeMCA.Rd | 10 + man/imputeMFA.Rd | 9 + man/imputeMultilevel.Rd | 3 man/imputePCA.Rd | 10 + man/prelim.Rd | 3 26 files changed, 391 insertions(+), 280 deletions(-)
Title: Sure Independence Screening
Description: Variable selection techniques are essential tools for model
selection and estimation in high-dimensional statistical models. Through this
publicly available package, we provide a unified environment to carry out
variable selection using iterative sure independence screening (SIS) (Fan and Lv (2008)<doi:10.1111/j.1467-9868.2008.00674.x>) and all
of its variants in generalized linear models (Fan and Song (2009)<doi:10.1214/10-AOS798>) and the Cox proportional hazards
model (Fan, Feng and Wu (2010)<doi:10.1214/10-IMSCOLL606>).
Author: Yang Feng [aut, cre],
Jianqing Fan [aut],
Diego Franco Saldana [aut],
Yichao Wu [aut],
Richard Samworth [aut]
Maintainer: Yang Feng <yang.feng@nyu.edu>
Diff between SIS versions 0.8-6 dated 2018-02-13 and 0.8-7 dated 2019-11-20
DESCRIPTION | 29 +++++++++++++++++++---------- MD5 | 6 +++--- R/SIS.R | 23 ++++++++++++++++------- man/SIS.Rd | 13 +++++++++---- 4 files changed, 47 insertions(+), 24 deletions(-)
Title: Functions to Solve Quadratic Programming Problems
Description: This package contains routines and documentation for
solving quadratic programming problems.
Author: S original by Berwin A. Turlach <Berwin.Turlach@gmail.com>
R port by Andreas Weingessel <Andreas.Weingessel@ci.tuwien.ac.at>
Fortran contributions from Cleve Moler (dposl/LINPACK and
(a modified version of) dpodi/LINPACK)
Maintainer: Berwin A. Turlach <Berwin.Turlach@gmail.com>
Diff between quadprog versions 1.5-7 dated 2019-05-06 and 1.5-8 dated 2019-11-20
ChangeLog | 12 ++++++++++++ DESCRIPTION | 14 ++++++++------ MD5 | 8 ++++---- src/solve.QP.compact.f | 4 ++-- src/solve.QP.f | 4 ++-- 5 files changed, 28 insertions(+), 14 deletions(-)
Title: Processing of Model Parameters
Description: Utilities for processing the parameters of various statistical models. Beyond computing p values, CIs, and other indices for a wide variety of models (see support list of insight; Lüdecke, Waggoner & Makowski (2019) <doi:10.21105/joss.01412>), this package implements features like bootstrapping or simulating of parameters and models, feature reduction (feature extraction and variable selection) as well as functions to describe data and variable characteristics (e.g. skewness, kurtosis, smoothness or distribution).
Author: Daniel Lüdecke [aut, cre] (<https://orcid.org/0000-0002-8895-3206>),
Dominique Makowski [aut] (<https://orcid.org/0000-0001-5375-9967>),
Mattan S. Ben-Shachar [aut] (<https://orcid.org/0000-0002-4287-4801>)
Maintainer: Daniel Lüdecke <d.luedecke@uke.de>
Diff between parameters versions 0.2.0 dated 2019-09-26 and 0.3.0 dated 2019-11-20
parameters-0.2.0/parameters/R/check_smoothness.R |only parameters-0.2.0/parameters/R/cohens_f.R |only parameters-0.2.0/parameters/R/convert_d_to_r.R |only parameters-0.2.0/parameters/R/convert_odds_to_d.R |only parameters-0.2.0/parameters/R/convert_odds_to_probs.R |only parameters-0.2.0/parameters/R/epsilon_squared.R |only parameters-0.2.0/parameters/R/eta_squared.R |only parameters-0.2.0/parameters/R/format_standardize.R |only parameters-0.2.0/parameters/R/get_statistic.R |only parameters-0.2.0/parameters/R/model_parameters.glmmTMB.R |only parameters-0.2.0/parameters/R/model_parameters.lm.R |only parameters-0.2.0/parameters/R/model_parameters.lme.R |only parameters-0.2.0/parameters/R/model_parameters.merMod.R |only parameters-0.2.0/parameters/R/model_parameters.polr.R |only parameters-0.2.0/parameters/R/normalize.R |only parameters-0.2.0/parameters/R/omega_squared.R |only parameters-0.2.0/parameters/R/parameters_standardize.R |only parameters-0.2.0/parameters/R/standardize.R |only parameters-0.2.0/parameters/R/standardize.data.frame.R |only parameters-0.2.0/parameters/R/standardize.models.R |only parameters-0.2.0/parameters/R/utils_ci_partial_eta_squared.R |only parameters-0.2.0/parameters/R/utils_confint_ncg.R |only parameters-0.2.0/parameters/R/utils_vcov.R |only parameters-0.2.0/parameters/man/check_smoothness.Rd |only parameters-0.2.0/parameters/man/d_to_r.Rd |only parameters-0.2.0/parameters/man/eta_squared.Rd |only parameters-0.2.0/parameters/man/format_standardize.Rd |only parameters-0.2.0/parameters/man/model_parameters.lm.Rd |only parameters-0.2.0/parameters/man/normalize.Rd |only parameters-0.2.0/parameters/man/odds_to_d.Rd |only parameters-0.2.0/parameters/man/odds_to_probs.Rd |only parameters-0.2.0/parameters/man/parameters_standardize.Rd |only parameters-0.2.0/parameters/man/standardize.Rd |only parameters-0.2.0/parameters/tests/testthat/test-check_factorstructure.R |only parameters-0.2.0/parameters/tests/testthat/test-convert.R |only parameters-0.2.0/parameters/tests/testthat/test-standardize.R |only parameters-0.3.0/parameters/DESCRIPTION | 51 parameters-0.3.0/parameters/MD5 | 248 ++-- parameters-0.3.0/parameters/NAMESPACE | 226 +-- parameters-0.3.0/parameters/NEWS.md | 49 parameters-0.3.0/parameters/R/check_clusterstructure.R |only parameters-0.3.0/parameters/R/check_factorstructure.R | 88 - parameters-0.3.0/parameters/R/check_multimodal.R |only parameters-0.3.0/parameters/R/ci.R | 139 +- parameters-0.3.0/parameters/R/ci_profile_boot.R | 57 parameters-0.3.0/parameters/R/ci_wald.R | 30 parameters-0.3.0/parameters/R/cluster_analysis.R |only parameters-0.3.0/parameters/R/cluster_discrimination.R |only parameters-0.3.0/parameters/R/convert_data_to_numeric.R | 11 parameters-0.3.0/parameters/R/data_partition.R | 27 parameters-0.3.0/parameters/R/demean.R |only parameters-0.3.0/parameters/R/dof.R |only parameters-0.3.0/parameters/R/dof_kenward.R |only parameters-0.3.0/parameters/R/extract_parameters.R | 118 +- parameters-0.3.0/parameters/R/factor_analysis.R |only parameters-0.3.0/parameters/R/format_algorithm.R |only parameters-0.3.0/parameters/R/format_ci.R | 13 parameters-0.3.0/parameters/R/format_model.R |only parameters-0.3.0/parameters/R/format_p.R | 52 parameters-0.3.0/parameters/R/format_parameters.R | 164 ++ parameters-0.3.0/parameters/R/model_bootstrap.R | 9 parameters-0.3.0/parameters/R/model_parameters.BFBayesFactor.R | 2 parameters-0.3.0/parameters/R/model_parameters.BayesFM.R | 2 parameters-0.3.0/parameters/R/model_parameters.FactoMineR.R | 6 parameters-0.3.0/parameters/R/model_parameters.Mclust.R |only parameters-0.3.0/parameters/R/model_parameters.R | 39 parameters-0.3.0/parameters/R/model_parameters.aov.R | 21 parameters-0.3.0/parameters/R/model_parameters.bayesian.R | 85 - parameters-0.3.0/parameters/R/model_parameters.gam.R | 12 parameters-0.3.0/parameters/R/model_parameters.htest.R | 2 parameters-0.3.0/parameters/R/model_parameters.kmeans.R |only parameters-0.3.0/parameters/R/model_parameters.lavaan.R | 5 parameters-0.3.0/parameters/R/model_parameters.psych.R | 34 parameters-0.3.0/parameters/R/model_parameters.wbm.R | 28 parameters-0.3.0/parameters/R/model_parameters.zeroinfl.R | 23 parameters-0.3.0/parameters/R/model_parameters_default.R |only parameters-0.3.0/parameters/R/model_parameters_mixed.R |only parameters-0.3.0/parameters/R/model_simulate.R | 25 parameters-0.3.0/parameters/R/n_clusters.R |only parameters-0.3.0/parameters/R/n_factors.R | 297 +++-- parameters-0.3.0/parameters/R/n_parameters.R | 147 ++ parameters-0.3.0/parameters/R/p_value.R | 209 ++- parameters-0.3.0/parameters/R/p_value_kenward.R | 38 parameters-0.3.0/parameters/R/p_value_wald.R | 4 parameters-0.3.0/parameters/R/parameters_reduction.R | 5 parameters-0.3.0/parameters/R/parameters_selection.R | 9 parameters-0.3.0/parameters/R/parameters_simulate.R | 30 parameters-0.3.0/parameters/R/parameters_table.R | 24 parameters-0.3.0/parameters/R/parameters_type.R | 97 + parameters-0.3.0/parameters/R/plot.R | 36 parameters-0.3.0/parameters/R/principal_components.R | 28 parameters-0.3.0/parameters/R/print.parameters_model.R | 84 + parameters-0.3.0/parameters/R/reshape_loadings.R | 29 parameters-0.3.0/parameters/R/robust_estimation.R |only parameters-0.3.0/parameters/R/se_kenward.R |only parameters-0.3.0/parameters/R/smoothness.R |only parameters-0.3.0/parameters/R/standard_error.R | 577 +++++++--- parameters-0.3.0/parameters/R/standardize_names.R | 2 parameters-0.3.0/parameters/R/utils.R | 59 - parameters-0.3.0/parameters/R/utils_cleaners.R |only parameters-0.3.0/parameters/R/utils_model_parameters.R |only parameters-0.3.0/parameters/R/utils_pca_efa.R | 24 parameters-0.3.0/parameters/R/utils_values_aov.R | 4 parameters-0.3.0/parameters/README.md | 161 +- parameters-0.3.0/parameters/build |only parameters-0.3.0/parameters/man/check_clusterstructure.Rd |only parameters-0.3.0/parameters/man/check_factorstructure.Rd | 6 parameters-0.3.0/parameters/man/check_kmo.Rd | 7 parameters-0.3.0/parameters/man/check_multimodal.Rd |only parameters-0.3.0/parameters/man/check_sphericity.Rd | 5 parameters-0.3.0/parameters/man/ci.merMod.Rd | 36 parameters-0.3.0/parameters/man/cluster_analysis.Rd |only parameters-0.3.0/parameters/man/cluster_discrimination.Rd |only parameters-0.3.0/parameters/man/convert_data_to_numeric.Rd | 6 parameters-0.3.0/parameters/man/degrees_of_freedom.Rd |only parameters-0.3.0/parameters/man/demean.Rd |only parameters-0.3.0/parameters/man/dot-compact_character.Rd |only parameters-0.3.0/parameters/man/dot-compact_list.Rd |only parameters-0.3.0/parameters/man/dot-factor_to_dummy.Rd |only parameters-0.3.0/parameters/man/dot-filter_component.Rd |only parameters-0.3.0/parameters/man/factor_analysis.Rd |only parameters-0.3.0/parameters/man/figures |only parameters-0.3.0/parameters/man/format_algorithm.Rd |only parameters-0.3.0/parameters/man/format_ci.Rd | 4 parameters-0.3.0/parameters/man/format_model.Rd |only parameters-0.3.0/parameters/man/format_p.Rd | 10 parameters-0.3.0/parameters/man/format_parameters.Rd | 7 parameters-0.3.0/parameters/man/model_parameters.Mclust.Rd |only parameters-0.3.0/parameters/man/model_parameters.Rd | 16 parameters-0.3.0/parameters/man/model_parameters.aov.Rd | 6 parameters-0.3.0/parameters/man/model_parameters.default.Rd |only parameters-0.3.0/parameters/man/model_parameters.gam.Rd | 8 parameters-0.3.0/parameters/man/model_parameters.htest.Rd | 2 parameters-0.3.0/parameters/man/model_parameters.kmeans.Rd |only parameters-0.3.0/parameters/man/model_parameters.lavaan.Rd | 2 parameters-0.3.0/parameters/man/model_parameters.merMod.Rd | 51 parameters-0.3.0/parameters/man/model_parameters.principal.Rd | 13 parameters-0.3.0/parameters/man/model_parameters.stanreg.Rd | 24 parameters-0.3.0/parameters/man/model_parameters.zeroinfl.Rd | 14 parameters-0.3.0/parameters/man/n_clusters.Rd |only parameters-0.3.0/parameters/man/n_factors.Rd | 15 parameters-0.3.0/parameters/man/n_parameters.Rd | 35 parameters-0.3.0/parameters/man/p_value.Rd | 25 parameters-0.3.0/parameters/man/p_value_kenward.Rd | 11 parameters-0.3.0/parameters/man/p_value_wald.Rd | 9 parameters-0.3.0/parameters/man/parameters_reduction.Rd | 3 parameters-0.3.0/parameters/man/parameters_selection.Rd | 3 parameters-0.3.0/parameters/man/parameters_simulate.Rd | 12 parameters-0.3.0/parameters/man/principal_components.Rd | 22 parameters-0.3.0/parameters/man/reshape_loadings.Rd | 2 parameters-0.3.0/parameters/man/smoothness.Rd |only parameters-0.3.0/parameters/man/standard_error.Rd | 65 - parameters-0.3.0/parameters/tests/testthat.R | 6 parameters-0.3.0/parameters/tests/testthat/test-backticks.R |only parameters-0.3.0/parameters/tests/testthat/test-checks.R |only parameters-0.3.0/parameters/tests/testthat/test-format.R | 4 parameters-0.3.0/parameters/tests/testthat/test-format_parameters.R |only parameters-0.3.0/parameters/tests/testthat/test-gamm.R | 2 parameters-0.3.0/parameters/tests/testthat/test-gee.R | 2 parameters-0.3.0/parameters/tests/testthat/test-model_parameters.bayesian.R | 36 parameters-0.3.0/parameters/tests/testthat/test-model_parameters.glm.R | 25 parameters-0.3.0/parameters/tests/testthat/test-model_parameters.htest.R | 4 parameters-0.3.0/parameters/tests/testthat/test-model_parameters.mixed.R | 11 parameters-0.3.0/parameters/tests/testthat/test-model_parameters_labels.R |only 164 files changed, 2569 insertions(+), 1370 deletions(-)
Title: Translate CSS Selectors to XPath Expressions
Description: Translates a CSS3 selector into an equivalent XPath
expression. This allows us to use CSS selectors when working with
the XML package as it can only evaluate XPath expressions. Also
provided are convenience functions useful for using CSS selectors on
XML nodes. This package is a port of the Python package 'cssselect'
(<https://cssselect.readthedocs.io/>).
Author: Simon Potter [aut, trl, cre],
Simon Sapin [aut],
Ian Bicking [aut]
Maintainer: Simon Potter <simon@sjp.co.nz>
Diff between selectr versions 0.4-1 dated 2018-04-06 and 0.4-2 dated 2019-11-20
DESCRIPTION | 8 +- MD5 | 24 ++++---- R/main.R | 9 +-- R/parser.R | 67 ++++++++++------------- R/xpath.R | 41 ++++++-------- R/zzz.R | 24 ++++---- inst/NEWS.Rd | 14 ++++ tests/testthat/test-main.R | 2 tests/testthat/test-quoting.R | 10 +-- tests/testthat/test-select-XML.R | 2 tests/testthat/test-select-xml2.R | 2 tests/testthat/test-translation.R | 108 +++++++++++++++++++------------------- tests/testthat/test-xpath.R | 12 ++-- 13 files changed, 164 insertions(+), 159 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-10-30 5.4.1
2019-05-16 5.4.0
2018-05-16 5.3.0
2018-04-13 5.2.0
2018-01-26 5.1.0
2017-10-20 5.0.4
2017-08-10 5.0.3
2017-05-24 5.0.2
2017-03-14 5.0.1
2017-01-04 5.0.0
2016-08-19 4.6.1
2015-10-01 4.6.0
2015-05-04 4.5.0
2014-07-18 4.4.0
2014-03-03 4.3.0
2014-01-10 4.2.0
2013-11-04 4.1.0
2013-06-12 4.0.3
2013-04-22 4.0.2
2013-04-06 4.0.1
2013-03-22 4.0.0
2012-09-04 3.1.2
2012-04-12 3.1.1
2012-03-20 3.1.0
2012-01-28 3.0.0
2011-11-10 2.6.7
2010-12-03 2.6.6
2010-08-17 2.6.5
2009-12-01 2.6.4
2009-11-29 2.6.3
2009-10-22 2.6.2
2009-09-18 2.6.1
2009-03-09 2.5.8
2009-02-10 2.5.7
2009-01-29 2.5.5
2008-09-05 2.5.1
2008-06-10 2.5.0
2008-02-29 2.4.1
2008-02-07 2.2.0
2007-09-21 2.1.0
2007-09-07 2.0.4
2007-09-01 2.0.3
2007-07-28 2.0.2
2007-07-13 2.0.1
2007-06-19 1.3.1
Title: R Interface to a 'PostGIS' Database
Description: Provides an interface between R and 'PostGIS'-enabled
'PostgreSQL' databases to transparently transfer spatial
data. Both vector (points, lines, polygons) and raster data are
supported in read and write modes. Also provides convenience
functions to execute common procedures in 'PostgreSQL/PostGIS'.
Author: Mathieu Basille [aut],
David Bucklin [aut, cre]
Maintainer: David Bucklin <david.bucklin@gmail.com>
Diff between rpostgis versions 1.4.2 dated 2018-11-12 and 1.4.3 dated 2019-11-20
rpostgis-1.4.2/rpostgis/TODO |only rpostgis-1.4.3/rpostgis/DESCRIPTION | 12 ++-- rpostgis-1.4.3/rpostgis/MD5 | 61 +++++++++++------------ rpostgis-1.4.3/rpostgis/NEWS.md | 24 +++++++++ rpostgis-1.4.3/rpostgis/R/all_db_wrapper_fns.R | 16 +++--- rpostgis-1.4.3/rpostgis/R/dbUtils_notExported.R | 6 +- rpostgis-1.4.3/rpostgis/R/dbWriteDataFrame.R | 11 ++-- rpostgis-1.4.3/rpostgis/R/pgGetRast.R | 20 ++++--- rpostgis-1.4.3/rpostgis/R/pgInsert.R | 4 + rpostgis-1.4.3/rpostgis/R/pgInsertize.R | 2 rpostgis-1.4.3/rpostgis/R/pgWriteRast.R | 29 ++++++++-- rpostgis-1.4.3/rpostgis/README.md | 7 ++ rpostgis-1.4.3/rpostgis/man/dbAddKey.Rd | 12 +++- rpostgis-1.4.3/rpostgis/man/dbAsDate.Rd | 3 - rpostgis-1.4.3/rpostgis/man/dbBuildTableQuery.Rd | 9 ++- rpostgis-1.4.3/rpostgis/man/dbColumn.Rd | 13 +++- rpostgis-1.4.3/rpostgis/man/dbComment.Rd | 10 +++ rpostgis-1.4.3/rpostgis/man/dbDrop.Rd | 12 +++- rpostgis-1.4.3/rpostgis/man/dbIndex.Rd | 13 +++- rpostgis-1.4.3/rpostgis/man/dbVacuum.Rd | 11 +++- rpostgis-1.4.3/rpostgis/man/dbWriteDataFrame.Rd | 2 rpostgis-1.4.3/rpostgis/man/pgGetGeom.Rd | 12 +++- rpostgis-1.4.3/rpostgis/man/pgGetLines.Rd | 10 +++ rpostgis-1.4.3/rpostgis/man/pgGetPolys.Rd | 10 +++ rpostgis-1.4.3/rpostgis/man/pgGetPts.Rd | 10 +++ rpostgis-1.4.3/rpostgis/man/pgGetRast.Rd | 12 ++++ rpostgis-1.4.3/rpostgis/man/pgInsert.Rd | 24 ++++++--- rpostgis-1.4.3/rpostgis/man/pgInsertizeGeom.Rd | 31 +++++++++-- rpostgis-1.4.3/rpostgis/man/pgMakePts.Rd | 29 +++++++++- rpostgis-1.4.3/rpostgis/man/pgPostGIS.Rd | 10 +++ rpostgis-1.4.3/rpostgis/man/pgWriteRast.Rd | 14 ++++- rpostgis-1.4.3/rpostgis/man/rpostgis.Rd | 9 +-- 32 files changed, 323 insertions(+), 125 deletions(-)
Title: Programming with Big Data -- Interface to MPI
Description: An efficient interface to MPI by utilizing S4
classes and methods with a focus on Single Program/Multiple Data
('SPMD')
parallel programming style, which is intended for batch parallel
execution.
Author: Wei-Chen Chen [aut, cre],
George Ostrouchov [aut],
Drew Schmidt [aut],
Pragneshkumar Patel [aut],
Hao Yu [aut],
Christian Heckendorf [ctb] (FreeBSD),
Brian Ripley [ctb] (Windows HPC Pack 2012),
R Core team [ctb] (some functions are modified from the base packages),
Sebastien Lamy de la Chapelle [aut] (fix check type for send/recv long
vectors)
Maintainer: Wei-Chen Chen <wccsnow@gmail.com>
Diff between pbdMPI versions 0.3-9 dated 2019-04-07 and 0.4-0 dated 2019-11-20
ChangeLog | 10 ++++++++++ DESCRIPTION | 20 ++++++++++++-------- MD5 | 31 ++++++++++++++++++++++--------- R/spmd_isend.r | 13 ++++++++++--- R/spmd_recv.r | 33 ++++++++++++++++----------------- R/spmd_send.r | 32 +++++++++++++++++++------------- R/windows/zzz.r | 2 +- R/zzz.r.in | 2 +- inst/mpi_valgrind |only man/ac_isend-method.Rd | 7 ++++++- man/zz_spmd_internal.Rd | 6 +++++- 11 files changed, 102 insertions(+), 54 deletions(-)