Title: Various R Programming Tools for Plotting Data
Description: Various R programming tools for plotting data, including:
- calculating and plotting locally smoothed summary function as
('bandplot', 'wapply'),
- enhanced versions of standard plots ('barplot2', 'boxplot2',
'heatmap.2', 'smartlegend'),
- manipulating colors ('col2hex', 'colorpanel', 'redgreen',
'greenred', 'bluered', 'redblue', 'rich.colors'),
- calculating and plotting two-dimensional data summaries ('ci2d',
'hist2d'),
- enhanced regression diagnostic plots ('lmplot2', 'residplot'),
- formula-enabled interface to 'stats::lowess' function ('lowess'),
- displaying textual data in plots ('textplot', 'sinkplot'),
- plotting a matrix where each cell contains a dot whose size
reflects the relative magnitude of the elements ('balloonplot'),
- plotting "Venn" diagrams ('venn'),
- displaying Open-Office style plots ('ooplot'),
- plotting multiple data on same region, with separate axes
('overplot'),
- plotting means and confidence intervals ('plotCI', 'plotmeans'),
- spacing points in an x-y plot so they don't overlap ('space').
Author: Gregory R. Warnes [aut],
Ben Bolker [aut],
Lodewijk Bonebakker [aut],
Robert Gentleman [aut],
Wolfgang Huber [aut],
Andy Liaw [aut],
Thomas Lumley [aut],
Martin Maechler [aut],
Arni Magnusson [aut],
Steffen Moeller [aut],
Marc Schwartz [aut],
Bill Venables [aut],
Tal Galili [ctb, cre]
Maintainer: Tal Galili <tal.galili@gmail.com>
Diff between gplots versions 3.0.1.2 dated 2020-01-11 and 3.0.3 dated 2020-02-24
gplots-3.0.1.2/gplots/inst/doc/BalloonPlot.pdf |only gplots-3.0.3/gplots/DESCRIPTION | 51 ++++++-- gplots-3.0.3/gplots/MD5 | 17 +- gplots-3.0.3/gplots/NEWS | 7 + gplots-3.0.3/gplots/NEWS.md |only gplots-3.0.3/gplots/R/zzz.R |only gplots-3.0.3/gplots/build/vignette.rds |binary gplots-3.0.3/gplots/inst/doc/venn.R | 6 - gplots-3.0.3/gplots/inst/doc/venn.Rnw | 145 ++++++++++++------------- gplots-3.0.3/gplots/inst/doc/venn.pdf |binary gplots-3.0.3/gplots/vignettes/venn.Rnw | 145 ++++++++++++------------- 11 files changed, 202 insertions(+), 169 deletions(-)
Title: Gapped-Kmer Support Vector Machine
Description: Imports the 'gkmSVM' v2.0 functionalities into R <http://www.beerlab.org/gkmsvm/>
It also uses the 'kernlab' library (separate R package by different authors) for various SVM algorithms.
Users should note that the suggested packages 'rtracklayer', 'GenomicRanges', 'BSgenome', 'BiocGenerics',
'Biostrings', 'GenomeInfoDb', 'IRanges', and 'S4Vectors' are all BioConductor packages <https://bioconductor.org>.
Author: Mahmoud Ghandi
Maintainer: Mike Beer <mbeer@jhu.edu>
Diff between gkmSVM versions 0.79.0 dated 2018-01-18 and 0.80.0 dated 2020-02-24
DESCRIPTION | 25 ++++++++++++------------- MD5 | 22 +++++++++++----------- R/genNullSeqs.R | 7 ++++++- man/gkmsvm_delta.Rd | 4 ++-- src/Converter.cpp | 6 ++++-- src/LList.cpp | 2 +- src/LList.h | 2 +- src/LTree.cpp | 2 +- src/LTree.h | 4 ++-- src/Sequence.cpp | 19 +++++++++++++------ src/mainGkmKernel.cpp | 20 ++++++++++---------- src/mainSVMclassify.cpp | 26 +++++++++++++------------- 12 files changed, 76 insertions(+), 63 deletions(-)
Title: RNA-Seq Generation/Modification for Simulation
Description: Generates/modifies RNA-seq data for use in simulations. We provide
a suite of functions that will add a known amount of signal to a real
RNA-seq dataset. The advantage of using this approach over simulating under
a theoretical distribution is that common/annoying aspects of the data
are more preserved, giving a more realistic evaluation of your method.
The main functions are select_counts(), thin_diff(), thin_lib(),
thin_gene(), thin_2group(), thin_all(), and effective_cor(). See
Gerard (2019) <doi:10.1101/758524> for details on the
implemented methods.
Author: David Gerard [aut, cre] (<https://orcid.org/0000-0001-9450-5023>)
Maintainer: David Gerard <gerard.1787@gmail.com>
Diff between seqgendiff versions 1.1.1 dated 2019-09-09 and 1.2.1 dated 2020-02-24
seqgendiff-1.1.1/seqgendiff/man/seqgen_2group.Rd |only seqgendiff-1.1.1/seqgendiff/man/seqgen_base.Rd |only seqgendiff-1.1.1/seqgendiff/man/seqgen_diff.Rd |only seqgendiff-1.1.1/seqgendiff/man/seqgendiff.Rd |only seqgendiff-1.2.1/seqgendiff/DESCRIPTION | 13 seqgendiff-1.2.1/seqgendiff/MD5 | 55 seqgendiff-1.2.1/seqgendiff/R/genthin.R | 1841 +++++------ seqgendiff-1.2.1/seqgendiff/R/seqgendiff.R | 102 seqgendiff-1.2.1/seqgendiff/R/theo.R | 3 seqgendiff-1.2.1/seqgendiff/build/vignette.rds |binary seqgendiff-1.2.1/seqgendiff/inst/doc/different_thinners.R | 38 seqgendiff-1.2.1/seqgendiff/inst/doc/different_thinners.Rmd | 1 seqgendiff-1.2.1/seqgendiff/inst/doc/different_thinners.html | 887 ++--- seqgendiff-1.2.1/seqgendiff/inst/doc/simulate_rnaseq.R | 50 seqgendiff-1.2.1/seqgendiff/inst/doc/simulate_rnaseq.Rmd | 79 seqgendiff-1.2.1/seqgendiff/inst/doc/simulate_rnaseq.html | 784 ++-- seqgendiff-1.2.1/seqgendiff/man/corassign.Rd | 3 seqgendiff-1.2.1/seqgendiff/man/effective_cor.Rd | 10 seqgendiff-1.2.1/seqgendiff/man/permute_design.Rd | 8 seqgendiff-1.2.1/seqgendiff/man/poisthin.Rd | 19 seqgendiff-1.2.1/seqgendiff/man/select_counts.Rd | 12 seqgendiff-1.2.1/seqgendiff/man/seqgendiff-package.Rd |only seqgendiff-1.2.1/seqgendiff/man/thin_2group.Rd | 19 seqgendiff-1.2.1/seqgendiff/man/thin_all.Rd | 6 seqgendiff-1.2.1/seqgendiff/man/thin_base.Rd | 6 seqgendiff-1.2.1/seqgendiff/man/thin_diff.Rd | 23 seqgendiff-1.2.1/seqgendiff/man/thin_gene.Rd | 6 seqgendiff-1.2.1/seqgendiff/man/thin_lib.Rd | 6 seqgendiff-1.2.1/seqgendiff/tests/testthat/obj.Rds |only seqgendiff-1.2.1/seqgendiff/tests/testthat/test_conversion.R |only seqgendiff-1.2.1/seqgendiff/vignettes/different_thinners.Rmd | 1 seqgendiff-1.2.1/seqgendiff/vignettes/simulate_rnaseq.Rmd | 79 32 files changed, 2126 insertions(+), 1925 deletions(-)
Title: Improved Text Rendering Support for 'Grid' Graphics
Description: Provides support for rendering of formatted text using 'grid' graphics. Text can be
formatted via a minimal subset of 'Markdown', 'HTML', and inline 'CSS' directives, and it can be
rendered both with and without word wrap.
Author: Claus O. Wilke [aut, cre] (<https://orcid.org/0000-0002-7470-9261>)
Maintainer: Claus O. Wilke <wilke@austin.utexas.edu>
Diff between gridtext versions 0.1.0 dated 2020-01-24 and 0.1.1 dated 2020-02-24
DESCRIPTION | 6 +++--- MD5 | 18 +++++++++--------- NEWS.md | 5 +++++ R/richtext-grob.R | 4 +++- R/textbox-grob.R | 4 +++- README.md | 11 +++++------ src/grid.cpp | 16 +++++----------- tests/testthat/Rplots.pdf |binary tests/testthat/test-richtext-grob.R | 9 +++++++++ tests/testthat/test-textbox-grob.R | 9 +++++++++ 10 files changed, 51 insertions(+), 31 deletions(-)
Title: Download 'Qualtrics' Survey Data
Description: Provides functions to access survey results directly into R using
the 'Qualtrics' API. 'Qualtrics' <https://www.qualtrics.com/about/> is an
online survey and data collection software platform. See
<https://api.qualtrics.com/> for more information about the 'Qualtrics' API.
This package is community-maintained and is not officially supported by
'Qualtrics'.
Author: Jasper Ginn [aut],
Samuel Kaminsky [ctb],
Eric Knudsen [ctb],
Julia Silge [aut, cre] (<https://orcid.org/0000-0002-3671-836X>),
Phoebe Wong [ctb],
O'Brien Joseph [ctb]
Maintainer: Julia Silge <julia.silge@gmail.com>
Diff between qualtRics versions 3.1.1 dated 2019-09-23 and 3.1.2 dated 2020-02-24
qualtRics-3.1.1/qualtRics/man/append_root_url.Rd |only qualtRics-3.1.1/qualtRics/man/registerOptions.Rd |only qualtRics-3.1.1/qualtRics/tests/testthat/test-options-yaml.R |only qualtRics-3.1.2/qualtRics/DESCRIPTION | 20 qualtRics-3.1.2/qualtRics/MD5 | 57 +- qualtRics-3.1.2/qualtRics/NAMESPACE | 3 qualtRics-3.1.2/qualtRics/NEWS.md |only qualtRics-3.1.2/qualtRics/R/all_surveys.R | 4 qualtRics-3.1.2/qualtRics/R/assertions.R | 52 +- qualtRics-3.1.2/qualtRics/R/column_map.R | 8 qualtRics-3.1.2/qualtRics/R/deprecated.R | 271 +---------- qualtRics-3.1.2/qualtRics/R/fetch_survey.R | 89 +-- qualtRics-3.1.2/qualtRics/R/metadata.R | 10 qualtRics-3.1.2/qualtRics/R/read_survey.R | 47 - qualtRics-3.1.2/qualtRics/R/survey_questions.R | 23 qualtRics-3.1.2/qualtRics/R/utils.R | 162 ++++-- qualtRics-3.1.2/qualtRics/build/vignette.rds |binary qualtRics-3.1.2/qualtRics/inst/doc/qualtRics.R | 22 qualtRics-3.1.2/qualtRics/inst/doc/qualtRics.html | 97 +-- qualtRics-3.1.2/qualtRics/man/create_raw_payload.Rd | 31 - qualtRics-3.1.2/qualtRics/man/create_root_url.Rd |only qualtRics-3.1.2/qualtRics/man/download_qualtrics_export.Rd | 6 qualtRics-3.1.2/qualtRics/man/fetch_survey.Rd | 62 +- qualtRics-3.1.2/qualtRics/man/getSurvey.Rd | 4 qualtRics-3.1.2/qualtRics/man/getSurveyQuestions.Rd | 4 qualtRics-3.1.2/qualtRics/man/qualtRicsConfigFile.Rd | 15 qualtRics-3.1.2/qualtRics/man/qualtrics_api_credentials.Rd | 8 qualtRics-3.1.2/qualtRics/man/qualtrics_api_request.Rd | 5 qualtRics-3.1.2/qualtRics/man/readSurvey.Rd | 4 qualtRics-3.1.2/qualtRics/man/read_survey.Rd | 14 qualtRics-3.1.2/qualtRics/tests/testthat/test-check-params.R | 13 qualtRics-3.1.2/qualtRics/tests/testthat/test-fetch-survey.R | 29 - 32 files changed, 502 insertions(+), 558 deletions(-)
Title: Parallel Bayesian Optimization of Hyperparameters
Description: Fast, flexible framework for implementing Bayesian optimization of model
hyperparameters according to the methods described in Snoek et al. <arXiv:1206.2944>.
The package allows the user to run scoring function in parallel, save intermediary
results, and tweak other aspects of the process to fully utilize the computing resources
available to the user.
Author: Samuel Wilson [aut, cre]
Maintainer: Samuel Wilson <samwilson303@gmail.com>
Diff between ParBayesianOptimization versions 1.0.0 dated 2020-02-11 and 1.1.0 dated 2020-02-24
ParBayesianOptimization-1.0.0/ParBayesianOptimization/R/BayesianOptimization.R |only ParBayesianOptimization-1.0.0/ParBayesianOptimization/R/applyCluster.R |only ParBayesianOptimization-1.0.0/ParBayesianOptimization/R/maxAcq.R |only ParBayesianOptimization-1.0.0/ParBayesianOptimization/R/plotProg.R |only ParBayesianOptimization-1.0.0/ParBayesianOptimization/man/BayesianOptimization.Rd |only ParBayesianOptimization-1.0.0/ParBayesianOptimization/man/applyCluster.Rd |only ParBayesianOptimization-1.0.0/ParBayesianOptimization/man/figures/plotObj-1.png |only ParBayesianOptimization-1.0.0/ParBayesianOptimization/man/figures/simpleFunction-1.png |only ParBayesianOptimization-1.0.0/ParBayesianOptimization/man/maxAcq.Rd |only ParBayesianOptimization-1.0.0/ParBayesianOptimization/man/plotProg.Rd |only ParBayesianOptimization-1.1.0/ParBayesianOptimization/DESCRIPTION | 10 ParBayesianOptimization-1.1.0/ParBayesianOptimization/MD5 | 75 ++--- ParBayesianOptimization-1.1.0/ParBayesianOptimization/NAMESPACE | 14 ParBayesianOptimization-1.1.0/ParBayesianOptimization/NEWS.md | 23 - ParBayesianOptimization-1.1.0/ParBayesianOptimization/R/addIterations.R | 144 +++++----- ParBayesianOptimization-1.1.0/ParBayesianOptimization/R/applyNoise.R | 14 ParBayesianOptimization-1.1.0/ParBayesianOptimization/R/bayesOpt.R | 79 ++--- ParBayesianOptimization-1.1.0/ParBayesianOptimization/R/calcAcq.R | 26 - ParBayesianOptimization-1.1.0/ParBayesianOptimization/R/changeSaveFile.R | 5 ParBayesianOptimization-1.1.0/ParBayesianOptimization/R/getLocalOptimums.R | 6 ParBayesianOptimization-1.1.0/ParBayesianOptimization/R/getNextParameters.R | 28 + ParBayesianOptimization-1.1.0/ParBayesianOptimization/R/plot.R | 28 - ParBayesianOptimization-1.1.0/ParBayesianOptimization/R/print.R | 20 - ParBayesianOptimization-1.1.0/ParBayesianOptimization/R/smallFuncs.R | 106 +++++-- ParBayesianOptimization-1.1.0/ParBayesianOptimization/R/updateGP.R | 79 ++++- ParBayesianOptimization-1.1.0/ParBayesianOptimization/README.md | 113 +++++-- ParBayesianOptimization-1.1.0/ParBayesianOptimization/build/vignette.rds |binary ParBayesianOptimization-1.1.0/ParBayesianOptimization/inst/doc/functionMaximization.html | 10 ParBayesianOptimization-1.1.0/ParBayesianOptimization/inst/doc/multiPointSampling.html | 2 ParBayesianOptimization-1.1.0/ParBayesianOptimization/inst/doc/tuningHyperparameters.html | 22 - ParBayesianOptimization-1.1.0/ParBayesianOptimization/man/addIterations.Rd | 16 - ParBayesianOptimization-1.1.0/ParBayesianOptimization/man/bayesOpt.Rd | 46 ++- ParBayesianOptimization-1.1.0/ParBayesianOptimization/man/figures/README-plotObj-1.png |binary ParBayesianOptimization-1.1.0/ParBayesianOptimization/man/figures/README-simpleFunction-1.png |binary ParBayesianOptimization-1.1.0/ParBayesianOptimization/man/figures/icon.png |only ParBayesianOptimization-1.1.0/ParBayesianOptimization/man/plot.bayesOpt.Rd | 9 ParBayesianOptimization-1.1.0/ParBayesianOptimization/man/updateGP.Rd | 4 ParBayesianOptimization-1.1.0/ParBayesianOptimization/tests/testthat/test-ExhaustedParameterSpace.R |only ParBayesianOptimization-1.1.0/ParBayesianOptimization/tests/testthat/test-bayesOpt1D.R | 73 ++--- ParBayesianOptimization-1.1.0/ParBayesianOptimization/tests/testthat/test-bayesOpt2D.R | 80 +++-- ParBayesianOptimization-1.1.0/ParBayesianOptimization/tests/testthat/test-errorHandling.R |only ParBayesianOptimization-1.1.0/ParBayesianOptimization/tests/testthat/test-hyperparameterTuning.R |only ParBayesianOptimization-1.1.0/ParBayesianOptimization/tests/testthat/test-iters.kTooHigh.R |only ParBayesianOptimization-1.1.0/ParBayesianOptimization/tests/testthat/test-otherHalting.R |only ParBayesianOptimization-1.1.0/ParBayesianOptimization/tests/testthat/test-plotting.R | 49 ++- ParBayesianOptimization-1.1.0/ParBayesianOptimization/vignettes/UCB.png |binary ParBayesianOptimization-1.1.0/ParBayesianOptimization/vignettes/icon.png |only 47 files changed, 640 insertions(+), 441 deletions(-)
More information about ParBayesianOptimization at CRAN
Permanent link
Title: Mathematical Morphology in Any Number of Dimensions
Description: Provides tools for performing mathematical morphology operations,
such as erosion and dilation, on data of arbitrary dimensionality. Can also
be used for finding connected components, resampling, filtering, smoothing
and other image processing-style operations.
Author: Jon Clayden
Maintainer: Jon Clayden <code@clayden.org>
Diff between mmand versions 1.5.4 dated 2019-03-17 and 1.6.0 dated 2020-02-24
mmand-1.5.4/mmand/tests/test-all.R |only mmand-1.5.4/mmand/tests/testthat |only mmand-1.5.4/mmand/tools/figures/cos_smoothed.png |only mmand-1.5.4/mmand/tools/figures/fan.png |only mmand-1.5.4/mmand/tools/figures/fan_components.png |only mmand-1.5.4/mmand/tools/figures/fan_dilated.png |only mmand-1.5.4/mmand/tools/figures/fan_eroded.png |only mmand-1.5.4/mmand/tools/figures/fan_eroded_73.png |only mmand-1.5.4/mmand/tools/figures/fan_eroded_77.png |only mmand-1.5.4/mmand/tools/figures/fan_gradient.png |only mmand-1.5.4/mmand/tools/figures/fan_median_filtered.png |only mmand-1.5.4/mmand/tools/figures/fan_scaled.png |only mmand-1.5.4/mmand/tools/figures/fan_smoothed.png |only mmand-1.5.4/mmand/tools/figures/fan_sobel.png |only mmand-1.5.4/mmand/tools/figures/fan_thresholded.png |only mmand-1.5.4/mmand/tools/figures/mn_profile.png |only mmand-1.6.0/mmand/DESCRIPTION | 12 - mmand-1.6.0/mmand/MD5 | 129 ++++++----- mmand-1.6.0/mmand/NAMESPACE | 2 mmand-1.6.0/mmand/NEWS | 14 + mmand-1.6.0/mmand/R/display.R | 5 mmand-1.6.0/mmand/R/distance.R |only mmand-1.6.0/mmand/README.md | 158 +++++++++----- mmand-1.6.0/mmand/inst/tinytest |only mmand-1.6.0/mmand/man/distanceTransform.Rd |only mmand-1.6.0/mmand/man/gameOfLife.Rd | 3 mmand-1.6.0/mmand/man/kernels.Rd | 3 mmand-1.6.0/mmand/man/resample.Rd | 3 mmand-1.6.0/mmand/man/sampleKernelFunction.Rd | 3 mmand-1.6.0/mmand/man/skeletonise.Rd | 3 mmand-1.6.0/mmand/src/Array.cpp | 8 mmand-1.6.0/mmand/src/Array.h | 13 - mmand-1.6.0/mmand/src/Distancer.cpp |only mmand-1.6.0/mmand/src/Distancer.h |only mmand-1.6.0/mmand/src/main.cpp | 22 + mmand-1.6.0/mmand/tests/tinytest.R |only mmand-1.6.0/mmand/tools/figures/cos-smoothed-1.png |only mmand-1.6.0/mmand/tools/figures/fan-1.png |only mmand-1.6.0/mmand/tools/figures/fan-components-1.png |only mmand-1.6.0/mmand/tools/figures/fan-dilated-1.png |only mmand-1.6.0/mmand/tools/figures/fan-distance-1.png |only mmand-1.6.0/mmand/tools/figures/fan-distance-2.png |only mmand-1.6.0/mmand/tools/figures/fan-eroded-1.png |only mmand-1.6.0/mmand/tools/figures/fan-eroded73-1.png |only mmand-1.6.0/mmand/tools/figures/fan-eroded77-1.png |only mmand-1.6.0/mmand/tools/figures/fan-gradient-1.png |only mmand-1.6.0/mmand/tools/figures/fan-median-filtered-1.png |only mmand-1.6.0/mmand/tools/figures/fan-scaled-1.png |only mmand-1.6.0/mmand/tools/figures/fan-smoothed-1.png |only mmand-1.6.0/mmand/tools/figures/fan-sobel-1.png |only mmand-1.6.0/mmand/tools/figures/fan-thresholded-1.png |only mmand-1.6.0/mmand/tools/figures/mn-profile-1.png |only 52 files changed, 239 insertions(+), 139 deletions(-)
Title: Add Even More Interactivity to Interactive Charts
Description: Like package 'manipulate' does for static graphics, this package
helps to easily add controls like sliders, pickers, checkboxes, etc. that
can be used to modify the input data or the parameters of an interactive
chart created with package 'htmlwidgets'.
Author: Veronique Bachelier [aut, cre],
Jalal-Edine ZAWAM [aut],
Francois Guillem [aut],
RTE [cph],
JJ Allaire [ctb],
Marion Praz [ctb] (New user interface),
Benoit Thieurmel [ctb],
Titouan Robert [ctb],
Duncan Murdoch [ctb]
Maintainer: Veronique Bachelier <veronique.bachelier@rte-france.com>
Diff between manipulateWidget versions 0.10.0 dated 2018-06-11 and 0.10.1 dated 2020-02-24
DESCRIPTION | 27 LICENSE | 2 MD5 | 138 NAMESPACE | 2 R/compare_options.R | 98 R/controller.R | 858 +- R/debug.R | 34 R/get_output_and_render_func.R | 66 R/get_row_and_cols.R | 36 R/init_inputs.R | 134 R/input_class.R | 470 - R/input_list_class.R | 280 R/input_utils.R | 132 R/inputs.R | 2 R/manipulate_widget.R | 602 +- R/module_ui.R | 232 R/mw_ui.R | 466 - R/on_done.R | 38 R/static_image.R | 118 R/zzz.R | 176 build/vignette.rds |binary inst/doc/manipulateWidgets.R | 24 inst/doc/manipulateWidgets.Rmd | 500 - inst/doc/manipulateWidgets.html | 6428 +++++++++++++++++++++ inst/lib/export/Blob/Blob.js | 422 - inst/lib/export/Blob/LICENSE.md | 50 inst/lib/export/FileSaver/FileSaver.min.js | 4 inst/lib/export/FileSaver/LICENSE.md | 18 inst/lib/export/canvas-toBlob/LICENSE.md | 62 inst/lib/export/canvas-toBlob/canvas-toBlob.js | 250 inst/lib/export/html2canvas/html2canvas.js | 6752 +++++++++++------------ inst/manipulate_widget/manipulate_widget.css | 524 - inst/manipulate_widget/manipulate_widget.js | 80 man/MWController-class.Rd | 154 man/combineWidgets-shiny.Rd | 60 man/combineWidgets.Rd | 325 - man/compareOptions.Rd | 106 man/knit_print.MWController.Rd | 30 man/manipulateWidget-package.Rd | 152 man/manipulateWidget.Rd | 515 - man/mwCheckbox.Rd | 103 man/mwCheckboxGroup.Rd | 111 man/mwDate.Rd | 99 man/mwDateRange.Rd | 107 man/mwGroup.Rd | 103 man/mwModule.Rd | 197 man/mwNumeric.Rd | 101 man/mwPassword.Rd | 109 man/mwRadio.Rd | 109 man/mwSelect.Rd | 149 man/mwSelectize.Rd | 136 man/mwSharedValue.Rd | 127 man/mwSlider.Rd | 131 man/mwText.Rd | 99 man/staticPlot.Rd | 108 man/summary.MWController.Rd | 30 tests/testthat.R | 8 tests/testthat/helper-input_class.R | 62 tests/testthat/test-controller.R | 204 tests/testthat/test-get_output_and_render_func.R | 44 tests/testthat/test-init_inputs.R | 144 tests/testthat/test-input_class.R | 88 tests/testthat/test-input_list_class.R | 206 tests/testthat/test-input_utils.R | 222 tests/testthat/test-inputs.R | 208 tests/testthat/test-manipulate_widget.R | 268 tests/testthat/test-mwModuleUI.R | 46 tests/testthat/test-on_done.R | 90 tests/testthat/test-staticPlot.R | 50 vignettes/manipulateWidgets.Rmd | 500 - 70 files changed, 15267 insertions(+), 9059 deletions(-)
More information about manipulateWidget at CRAN
Permanent link
Title: Weighted, Two-Mode, and Longitudinal Networks Analysis
Description: Binary ties limit the richness of network analyses as relations are unique. The two-mode structure contains a number of features lost when projection it to a one-mode network. Longitudinal datasets allow for an understanding of the causal relationship among ties, which is not the case in cross-sectional datasets as ties are dependent upon each other.
Author: Tore Opsahl
Maintainer: Tore Opsahl <tore@opsahl.co.uk>
Diff between tnet versions 3.0.14.1 dated 2020-01-24 and 3.0.16 dated 2020-02-24
ChangeLog | 4 ++++ DESCRIPTION | 20 +++++++++----------- MD5 | 14 +++++++------- R/tnet_ucinet.R | 2 +- data/tnet.RData |binary man/tnet-package.Rd | 4 ++-- man/tnet_ucinet.Rd | 6 +++--- man/weighted_richclub_w.Rd | 8 ++++---- 8 files changed, 30 insertions(+), 28 deletions(-)
Title: Build Machine Learning Models Like Using Python's Scikit-Learn
Library in R
Description: The idea is to provide a standard interface
to users who use both R and Python for building machine learning models.
This package provides a scikit-learn's fit, predict interface to
train machine learning models in R.
Author: Manish Saraswat [aut, cre]
Maintainer: Manish Saraswat <manish06saraswat@gmail.com>
Diff between superml versions 0.5.1 dated 2020-02-19 and 0.5.2 dated 2020-02-24
DESCRIPTION | 16 MD5 | 45 NAMESPACE | 2 NEWS.md | 7 R/CountVectorizer.R | 153 --- R/RcppExports.R |only R/TfidfVectorizer.R | 23 R/super_utils.R | 9 README.md | 1 inst/doc/Guide-to-CountVectorizer.R | 15 inst/doc/Guide-to-CountVectorizer.Rmd | 23 inst/doc/Guide-to-CountVectorizer.html | 221 ++-- inst/doc/Guide-to-TfidfVectorizer.R | 15 inst/doc/Guide-to-TfidfVectorizer.Rmd | 24 inst/doc/Guide-to-TfidfVectorizer.html | 245 ++-- inst/doc/introduction.R | 3 inst/doc/introduction.Rmd | 10 inst/doc/introduction.html | 1671 ++++++++++++++++----------------- man/CountVectorizer.Rd | 10 man/TfIdfVectorizer.Rd | 10 src |only vignettes/Guide-to-CountVectorizer.Rmd | 23 vignettes/Guide-to-TfidfVectorizer.Rmd | 24 vignettes/introduction.Rmd | 10 24 files changed, 1285 insertions(+), 1275 deletions(-)
Title: Hierarchical Cluster Analysis of Nominal Data
Description: Similarity measures for hierarchical clustering of objects characterized by
nominal (categorical) variables. Evaluation criteria for nominal data clustering.
Author: Zdenek Sulc [aut, cre],
Jana Cibulkova [aut],
Hana Rezankova [aut]
Maintainer: Zdenek Sulc <zdenek.sulc@vse.cz>
Diff between nomclust versions 1.1.1106 dated 2017-06-06 and 2.1.3 dated 2020-02-24
nomclust-1.1.1106/nomclust/R/WCE.R |only nomclust-1.1.1106/nomclust/R/WCM.R |only nomclust-1.1.1106/nomclust/R/nnWCE.R |only nomclust-1.1.1106/nomclust/R/nnWCM.R |only nomclust-1.1.1106/nomclust/R/psfe.R |only nomclust-1.1.1106/nomclust/R/psfm.R |only nomclust-1.1.1106/nomclust/R/pstau.R |only nomclust-1.1.1106/nomclust/R/psu.R |only nomclust-2.1.3/nomclust/DESCRIPTION | 26 - nomclust-2.1.3/nomclust/MD5 | 102 +++---- nomclust-2.1.3/nomclust/NAMESPACE | 8 nomclust-2.1.3/nomclust/R/EVAL.R |only nomclust-2.1.3/nomclust/R/dend.plot.R |only nomclust-2.1.3/nomclust/R/eskin.R | 65 +--- nomclust-2.1.3/nomclust/R/eskin_fx.R |only nomclust-2.1.3/nomclust/R/eval.plot.R |only nomclust-2.1.3/nomclust/R/evalclust.R | 177 +++++++----- nomclust-2.1.3/nomclust/R/freq.abs.R | 8 nomclust-2.1.3/nomclust/R/good1.R | 64 +--- nomclust-2.1.3/nomclust/R/good1_fx.R |only nomclust-2.1.3/nomclust/R/good2.R | 68 +--- nomclust-2.1.3/nomclust/R/good2_fx.R |only nomclust-2.1.3/nomclust/R/good3.R | 62 +--- nomclust-2.1.3/nomclust/R/good3_fx.R |only nomclust-2.1.3/nomclust/R/good4.R | 66 +--- nomclust-2.1.3/nomclust/R/good4_fx.R |only nomclust-2.1.3/nomclust/R/iof.R | 61 +--- nomclust-2.1.3/nomclust/R/iof_fx.R |only nomclust-2.1.3/nomclust/R/lin.R | 64 +--- nomclust-2.1.3/nomclust/R/lin1.R | 71 +--- nomclust-2.1.3/nomclust/R/lin1_fx.R |only nomclust-2.1.3/nomclust/R/lin_fx.R |only nomclust-2.1.3/nomclust/R/morlini.R | 82 ++--- nomclust-2.1.3/nomclust/R/morlini_fx.R |only nomclust-2.1.3/nomclust/R/nomclust.R | 374 +++++++++++++++++++------- nomclust-2.1.3/nomclust/R/nomprox.R | 228 +++++++++------ nomclust-2.1.3/nomclust/R/of.R | 61 +--- nomclust-2.1.3/nomclust/R/of_fx.R |only nomclust-2.1.3/nomclust/R/sm.R | 67 +--- nomclust-2.1.3/nomclust/R/sm_fx.R |only nomclust-2.1.3/nomclust/R/ve.R | 62 +--- nomclust-2.1.3/nomclust/R/ve_fx.R |only nomclust-2.1.3/nomclust/R/vm.R | 56 +-- nomclust-2.1.3/nomclust/R/vm_fx.R |only nomclust-2.1.3/nomclust/data/CA.methods.RData |only nomclust-2.1.3/nomclust/data/data20.RData |binary nomclust-2.1.3/nomclust/data/datalist | 3 nomclust-2.1.3/nomclust/man/CA.methods.Rd |only nomclust-2.1.3/nomclust/man/dend.plot.Rd |only nomclust-2.1.3/nomclust/man/eskin.Rd | 38 +- nomclust-2.1.3/nomclust/man/eval.plot.Rd |only nomclust-2.1.3/nomclust/man/evalclust.Rd | 59 ++-- nomclust-2.1.3/nomclust/man/good1.Rd | 37 +- nomclust-2.1.3/nomclust/man/good2.Rd | 40 +- nomclust-2.1.3/nomclust/man/good3.Rd | 35 -- nomclust-2.1.3/nomclust/man/good4.Rd | 40 +- nomclust-2.1.3/nomclust/man/iof.Rd | 36 -- nomclust-2.1.3/nomclust/man/lin.Rd | 37 -- nomclust-2.1.3/nomclust/man/lin1.Rd | 38 +- nomclust-2.1.3/nomclust/man/morlini.Rd | 38 -- nomclust-2.1.3/nomclust/man/nomclust.Rd | 122 ++++++-- nomclust-2.1.3/nomclust/man/nomprox.Rd | 63 ++-- nomclust-2.1.3/nomclust/man/of.Rd | 34 -- nomclust-2.1.3/nomclust/man/sm.Rd | 40 -- nomclust-2.1.3/nomclust/man/ve.Rd | 35 +- nomclust-2.1.3/nomclust/man/vm.Rd | 27 - 66 files changed, 1289 insertions(+), 1205 deletions(-)
Title: Multivariate Normal and t Distributions
Description: Computes multivariate normal and t probabilities, quantiles,
random deviates and densities.
Author: Alan Genz [aut],
Frank Bretz [aut],
Tetsuhisa Miwa [aut],
Xuefei Mi [aut],
Friedrich Leisch [ctb],
Fabian Scheipl [ctb],
Bjoern Bornkamp [ctb] (<https://orcid.org/0000-0002-6294-8185>),
Martin Maechler [ctb],
Torsten Hothorn [aut, cre] (<https://orcid.org/0000-0001-8301-0471>)
Maintainer: Torsten Hothorn <Torsten.Hothorn@R-project.org>
Diff between mvtnorm versions 1.0-12 dated 2020-01-09 and 1.1-0 dated 2020-02-24
DESCRIPTION | 8 +- MD5 | 12 +-- R/mvnorm.R | 2 inst/NEWS | 5 + inst/doc/MVT_Rnews.pdf |binary src/C_FORTRAN_interface.c | 10 ++ src/mvt.f | 161 ---------------------------------------------- 7 files changed, 26 insertions(+), 172 deletions(-)
Title: Multiple Hot-Deck Imputation
Description: Performs multiple hot-deck imputation of categorical and continuous variables in a data frame.
Author: Skyler Cranmer, Jeff Gill, Natalie Jackson, Andreas Murr, Dave Armstrong
Maintainer: Dave Armstrong <dave@quantoid.net>
Diff between hot.deck versions 1.1 dated 2016-01-04 and 1.1-1 dated 2020-02-24
DESCRIPTION | 11 ++++++----- MD5 | 23 +++++++++++++---------- NAMESPACE | 4 ++-- R/hot.deck.R | 2 +- README.md |only build/vignette.rds |binary inst/doc/Using_Hot_Deck_Data.R | 10 ++++------ inst/doc/Using_Hot_Deck_Data.Rnw | 12 +++++------- inst/doc/Using_Hot_Deck_Data.pdf |binary man/hot.deck-package.Rd | 8 ++++---- man/hot.deck.Rd | 2 +- vignettes/Using_Hot_Deck_Data-concordance.tex |only vignettes/Using_Hot_Deck_Data.Rnw | 12 +++++------- vignettes/apsr.bst |only 14 files changed, 41 insertions(+), 43 deletions(-)
Title: Fast FFT and DCT Based on the FFTW Library
Description: Provides a simple and efficient wrapper around the fastest
Fourier transform in the west (FFTW) library <http://www.fftw.org/>.
Author: Olaf Mersmann [aut],
Sebastian Krey [ctb],
Uwe Ligges [ctb, cre]
Maintainer: Uwe Ligges <ligges@statistik.tu-dortmund.de>
Diff between fftw versions 1.0-5 dated 2019-03-04 and 1.0-6 dated 2020-02-24
DESCRIPTION | 6 ++-- MD5 | 6 ++-- configure | 78 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++--- configure.ac | 2 - 4 files changed, 82 insertions(+), 10 deletions(-)
Title: Compute Decision Interval and Average Run Length for CUSUM
Charts
Description: Computation of decision intervals (H) and average run lengths (ARL) for CUSUM charts. Details of the method are seen in Hawkins and Olwell (2012): Cumulative sum charts and charting for quality improvement, Springer Science & Business Media.
Author: Douglas M. Hawkins, David H. Olwell, and Boxiang Wang
Maintainer: Boxiang Wang <boxiang-wang@uiowa.edu>
Diff between CUSUMdesign versions 1.1.4 dated 2020-02-17 and 1.1.5 dated 2020-02-24
DESCRIPTION | 10 ++--- MD5 | 10 ++--- R/getARL.R | 2 - R/getH.R | 2 - src/ANYSUBS.f | 103 +++++++++++++++++++++++++++++----------------------------- src/init.c | 4 +- 6 files changed, 67 insertions(+), 64 deletions(-)
Title: An R Interface to Open-Access Malaria Data, Hosted by the
'Malaria Atlas Project'
Description: A suite of tools to allow you to download all
publicly available parasite rate survey points, mosquito occurrence points and raster surfaces from
the 'Malaria Atlas Project' <https://malariaatlas.org/> servers as well as utility functions for plotting
the downloaded data.
Author: Daniel Pfeffer [aut] (<https://orcid.org/0000-0002-2204-3488>),
Tim Lucas [aut, cre] (<https://orcid.org/0000-0003-4694-8107>),
Daniel May [aut] (<https://orcid.org/0000-0003-0005-2452>),
Suzanne Keddie [aut] (<https://orcid.org/0000-0003-1254-7794>),
Jen Rozier [aut] (<https://orcid.org/0000-0002-2610-7557>),
Oliver Watson [aut] (<https://orcid.org/0000-0003-2374-0741>),
Harry Gibson [aut] (<https://orcid.org/0000-0001-6779-3250>),
Nick Golding [ctb],
David Smith [ctb]
Maintainer: Tim Lucas <timcdlucas@gmail.com>
Diff between malariaAtlas versions 0.0.5 dated 2019-11-26 and 1.0.0 dated 2020-02-24
DESCRIPTION | 8 MD5 | 32 +-- R/extractRaster.R | 97 +++++++--- R/getPR.R | 10 - R/getRaster.R | 4 R/getShp.R | 2 R/getVecOcc.R | 6 R/listPoints.R | 4 R/listRaster.R | 2 R/listShp.R | 8 R/listSpecies.R | 2 README.md | 8 build/vignette.rds |binary inst/doc/overview.Rmd | 4 inst/doc/overview.html | 409 ++++++++++++++++++++++++++++++++----------- tests/testthat/test_getShp.R | 2 vignettes/overview.Rmd | 4 17 files changed, 431 insertions(+), 171 deletions(-)
Title: R Client for the 'Civis Platform API'
Description: A convenient interface for making
requests directly to the 'Civis Platform API' <https://www.civisanalytics.com/platform/>.
Full documentation available 'here' <https://civisanalytics.github.io/civis-r/>.
Author: Patrick Miller [cre, aut],
Keith Ingersoll [aut],
Bill Lattner [ctb],
Anh Le [ctb],
Michelangelo D'Agostino [ctb],
Sam Weiss [ctb],
Stephen Hoover [ctb],
Danning Chen [ctb],
Elizabeth Sander [ctb],
Madison Hobbs [ctb],
Anna Bladey [ctb],
Sahil Shah [ctb]
Maintainer: Patrick Miller <pmiller@civisanalytics.com>
Diff between civis versions 2.1.0 dated 2019-09-07 and 2.1.2 dated 2020-02-24
civis-2.1.0/civis/man/clusters_get_workers.Rd |only civis-2.1.0/civis/man/clusters_list_workers.Rd |only civis-2.1.0/civis/man/clusters_list_workers_active_jobs.Rd |only civis-2.1.0/civis/man/clusters_list_workers_queued_jobs.Rd |only civis-2.1.0/civis/man/codes_delete.Rd |only civis-2.1.0/civis/man/codes_get.Rd |only civis-2.1.0/civis/man/codes_list.Rd |only civis-2.1.0/civis/man/codes_patch.Rd |only civis-2.1.0/civis/man/codes_post.Rd |only civis-2.1.0/civis/man/codes_put.Rd |only civis-2.1.0/civis/man/results_delete_grants.Rd |only civis-2.1.0/civis/man/results_delete_projects.Rd |only civis-2.1.0/civis/man/results_delete_services_projects.Rd |only civis-2.1.0/civis/man/results_delete_services_shares_groups.Rd |only civis-2.1.0/civis/man/results_delete_services_shares_users.Rd |only civis-2.1.0/civis/man/results_delete_shares_groups.Rd |only civis-2.1.0/civis/man/results_delete_shares_users.Rd |only civis-2.1.0/civis/man/results_get.Rd |only civis-2.1.0/civis/man/results_get_git_commits.Rd |only civis-2.1.0/civis/man/results_get_services.Rd |only civis-2.1.0/civis/man/results_list.Rd |only civis-2.1.0/civis/man/results_list_git.Rd |only civis-2.1.0/civis/man/results_list_git_commits.Rd |only civis-2.1.0/civis/man/results_list_projects.Rd |only civis-2.1.0/civis/man/results_list_services_projects.Rd |only civis-2.1.0/civis/man/results_list_services_shares.Rd |only civis-2.1.0/civis/man/results_list_shares.Rd |only civis-2.1.0/civis/man/results_patch.Rd |only civis-2.1.0/civis/man/results_patch_services.Rd |only civis-2.1.0/civis/man/results_post.Rd |only civis-2.1.0/civis/man/results_post_git_commits.Rd |only civis-2.1.0/civis/man/results_post_grants.Rd |only civis-2.1.0/civis/man/results_post_services.Rd |only civis-2.1.0/civis/man/results_put_archive.Rd |only civis-2.1.0/civis/man/results_put_git.Rd |only civis-2.1.0/civis/man/results_put_projects.Rd |only civis-2.1.0/civis/man/results_put_services_projects.Rd |only civis-2.1.0/civis/man/results_put_services_shares_groups.Rd |only civis-2.1.0/civis/man/results_put_services_shares_users.Rd |only civis-2.1.0/civis/man/results_put_shares_groups.Rd |only civis-2.1.0/civis/man/results_put_shares_users.Rd |only civis-2.1.2/civis/DESCRIPTION | 19 civis-2.1.2/civis/MD5 | 796 - civis-2.1.2/civis/NAMESPACE | 113 civis-2.1.2/civis/R/civis_ml.R | 41 civis-2.1.2/civis/R/civis_ml_utils.R | 126 civis-2.1.2/civis/R/civis_ml_workflows.R | 45 civis-2.1.2/civis/R/generated_client.R | 6025 ++++++---- civis-2.1.2/civis/R/io.R | 25 civis-2.1.2/civis/R/utils.R | 2 civis-2.1.2/civis/R/zzz.R | 21 civis-2.1.2/civis/README.md | 16 civis-2.1.2/civis/build/vignette.rds |binary civis-2.1.2/civis/inst/doc/civis_ml.R | 44 civis-2.1.2/civis/inst/doc/civis_ml.Rmd | 109 civis-2.1.2/civis/inst/doc/civis_ml.html | 150 civis-2.1.2/civis/inst/doc/civis_scripts.R | 38 civis-2.1.2/civis/inst/doc/civis_scripts.html | 21 civis-2.1.2/civis/inst/doc/concurrency.R | 8 civis-2.1.2/civis/inst/doc/concurrency.html | 17 civis-2.1.2/civis/inst/doc/data_import_and_export.R | 34 civis-2.1.2/civis/inst/doc/data_import_and_export.html | 17 civis-2.1.2/civis/inst/doc/quick_start.R | 6 civis-2.1.2/civis/inst/doc/quick_start.html | 17 civis-2.1.2/civis/man/CivisFuture.Rd | 20 civis-2.1.2/civis/man/admin_delete_announcements.Rd |only civis-2.1.2/civis/man/admin_get_announcements.Rd |only civis-2.1.2/civis/man/admin_list_announcements.Rd |only civis-2.1.2/civis/man/admin_list_organizations.Rd |only civis-2.1.2/civis/man/admin_patch_announcements.Rd |only civis-2.1.2/civis/man/admin_patch_themes.Rd |only civis-2.1.2/civis/man/admin_post_announcements.Rd |only civis-2.1.2/civis/man/admin_post_themes.Rd |only civis-2.1.2/civis/man/aliases_get.Rd | 2 civis-2.1.2/civis/man/aliases_get_object_type.Rd | 4 civis-2.1.2/civis/man/aliases_list.Rd | 13 civis-2.1.2/civis/man/aliases_patch.Rd | 13 civis-2.1.2/civis/man/aliases_post.Rd | 4 civis-2.1.2/civis/man/aliases_put.Rd | 4 civis-2.1.2/civis/man/aliases_put_shares_groups.Rd | 9 civis-2.1.2/civis/man/aliases_put_shares_users.Rd | 9 civis-2.1.2/civis/man/announcements_list.Rd | 8 civis-2.1.2/civis/man/apps_delete_releases_shares_groups.Rd |only civis-2.1.2/civis/man/apps_delete_releases_shares_users.Rd |only civis-2.1.2/civis/man/apps_list_instances.Rd | 11 civis-2.1.2/civis/man/apps_list_releases.Rd | 10 civis-2.1.2/civis/man/apps_list_releases_shares.Rd |only civis-2.1.2/civis/man/apps_patch_releases.Rd |only civis-2.1.2/civis/man/apps_post_releases.Rd |only civis-2.1.2/civis/man/apps_put_features.Rd |only civis-2.1.2/civis/man/apps_put_instances_shares_groups.Rd | 10 civis-2.1.2/civis/man/apps_put_instances_shares_users.Rd | 10 civis-2.1.2/civis/man/apps_put_releases_archive.Rd |only civis-2.1.2/civis/man/apps_put_releases_shares_groups.Rd |only civis-2.1.2/civis/man/apps_put_releases_shares_users.Rd |only civis-2.1.2/civis/man/await.Rd | 25 civis-2.1.2/civis/man/civis_ml.Rd | 56 civis-2.1.2/civis/man/civis_ml_extra_trees_classifier.Rd | 46 civis-2.1.2/civis/man/civis_ml_extra_trees_regressor.Rd | 43 civis-2.1.2/civis/man/civis_ml_gradient_boosting_classifier.Rd | 49 civis-2.1.2/civis/man/civis_ml_gradient_boosting_regressor.Rd | 51 civis-2.1.2/civis/man/civis_ml_random_forest_classifier.Rd | 46 civis-2.1.2/civis/man/civis_ml_random_forest_regressor.Rd | 45 civis-2.1.2/civis/man/civis_ml_sparse_linear_regressor.Rd | 32 civis-2.1.2/civis/man/civis_ml_sparse_logistic.Rd | 44 civis-2.1.2/civis/man/civis_ml_sparse_ridge_regressor.Rd | 39 civis-2.1.2/civis/man/civis_script.Rd | 6 civis-2.1.2/civis/man/civis_table.Rd | 8 civis-2.1.2/civis/man/civis_to_multifile_csv.Rd | 14 civis-2.1.2/civis/man/clusters_list_kubernetes.Rd | 9 civis-2.1.2/civis/man/clusters_list_kubernetes_deployments.Rd | 12 civis-2.1.2/civis/man/clusters_patch_kubernetes.Rd |only civis-2.1.2/civis/man/clusters_patch_kubernetes_partitions.Rd | 9 civis-2.1.2/civis/man/clusters_post_kubernetes.Rd |only civis-2.1.2/civis/man/credentials_list.Rd | 11 civis-2.1.2/civis/man/credentials_post.Rd | 13 civis-2.1.2/civis/man/credentials_put.Rd | 14 civis-2.1.2/civis/man/credentials_put_shares_groups.Rd | 9 civis-2.1.2/civis/man/credentials_put_shares_users.Rd | 9 civis-2.1.2/civis/man/databases_list_tables.Rd | 10 civis-2.1.2/civis/man/download_civis.Rd | 44 civis-2.1.2/civis/man/enhancements_delete_civis_data_match_projects.Rd |only civis-2.1.2/civis/man/enhancements_delete_civis_data_match_shares_groups.Rd |only civis-2.1.2/civis/man/enhancements_delete_civis_data_match_shares_users.Rd |only civis-2.1.2/civis/man/enhancements_get_civis_data_match.Rd | 10 civis-2.1.2/civis/man/enhancements_list.Rd | 13 civis-2.1.2/civis/man/enhancements_list_cass_ncoa_runs.Rd | 9 civis-2.1.2/civis/man/enhancements_list_cass_ncoa_runs_logs.Rd | 3 civis-2.1.2/civis/man/enhancements_list_cass_ncoa_runs_outputs.Rd | 10 civis-2.1.2/civis/man/enhancements_list_civis_data_match_projects.Rd |only civis-2.1.2/civis/man/enhancements_list_civis_data_match_runs.Rd | 9 civis-2.1.2/civis/man/enhancements_list_civis_data_match_runs_logs.Rd | 8 civis-2.1.2/civis/man/enhancements_list_civis_data_match_runs_outputs.Rd | 10 civis-2.1.2/civis/man/enhancements_list_civis_data_match_shares.Rd |only civis-2.1.2/civis/man/enhancements_list_data_unification_runs.Rd | 9 civis-2.1.2/civis/man/enhancements_list_data_unification_runs_logs.Rd | 8 civis-2.1.2/civis/man/enhancements_list_data_unification_runs_outputs.Rd | 10 civis-2.1.2/civis/man/enhancements_list_geocode_runs.Rd | 9 civis-2.1.2/civis/man/enhancements_list_geocode_runs_logs.Rd | 3 civis-2.1.2/civis/man/enhancements_list_geocode_runs_outputs.Rd | 10 civis-2.1.2/civis/man/enhancements_list_table_deduplication_runs.Rd | 9 civis-2.1.2/civis/man/enhancements_list_table_deduplication_runs_logs.Rd | 8 civis-2.1.2/civis/man/enhancements_list_table_deduplication_runs_outputs.Rd | 10 civis-2.1.2/civis/man/enhancements_patch_cass_ncoa.Rd | 21 civis-2.1.2/civis/man/enhancements_patch_civis_data_match.Rd | 30 civis-2.1.2/civis/man/enhancements_patch_data_unification.Rd | 18 civis-2.1.2/civis/man/enhancements_patch_geocode.Rd | 23 civis-2.1.2/civis/man/enhancements_patch_table_deduplication.Rd | 16 civis-2.1.2/civis/man/enhancements_post_cass_ncoa.Rd | 19 civis-2.1.2/civis/man/enhancements_post_civis_data_match.Rd | 57 civis-2.1.2/civis/man/enhancements_post_civis_data_match_clone.Rd |only civis-2.1.2/civis/man/enhancements_post_data_unification.Rd | 17 civis-2.1.2/civis/man/enhancements_post_geocode.Rd | 21 civis-2.1.2/civis/man/enhancements_post_table_deduplication.Rd | 15 civis-2.1.2/civis/man/enhancements_put_cass_ncoa.Rd | 20 civis-2.1.2/civis/man/enhancements_put_cass_ncoa_shares_groups.Rd | 9 civis-2.1.2/civis/man/enhancements_put_cass_ncoa_shares_users.Rd | 9 civis-2.1.2/civis/man/enhancements_put_civis_data_match.Rd | 58 civis-2.1.2/civis/man/enhancements_put_civis_data_match_archive.Rd |only civis-2.1.2/civis/man/enhancements_put_civis_data_match_projects.Rd |only civis-2.1.2/civis/man/enhancements_put_civis_data_match_shares_groups.Rd |only civis-2.1.2/civis/man/enhancements_put_civis_data_match_shares_users.Rd |only civis-2.1.2/civis/man/enhancements_put_data_unification.Rd | 18 civis-2.1.2/civis/man/enhancements_put_geocode.Rd | 22 civis-2.1.2/civis/man/enhancements_put_geocode_shares_groups.Rd | 9 civis-2.1.2/civis/man/enhancements_put_geocode_shares_users.Rd | 9 civis-2.1.2/civis/man/enhancements_put_table_deduplication.Rd | 16 civis-2.1.2/civis/man/exports_list.Rd | 14 civis-2.1.2/civis/man/feature_flags_delete_groups.Rd |only civis-2.1.2/civis/man/feature_flags_delete_users.Rd |only civis-2.1.2/civis/man/feature_flags_get.Rd |only civis-2.1.2/civis/man/feature_flags_list.Rd |only civis-2.1.2/civis/man/feature_flags_put_groups.Rd |only civis-2.1.2/civis/man/feature_flags_put_users.Rd |only civis-2.1.2/civis/man/fetch_all.Rd | 3 civis-2.1.2/civis/man/fetch_output_file_ids.Rd | 12 civis-2.1.2/civis/man/fetch_until.Rd | 3 civis-2.1.2/civis/man/files_delete_preprocess_csv.Rd |only civis-2.1.2/civis/man/files_get_preprocess_csv.Rd |only civis-2.1.2/civis/man/files_patch_preprocess_csv.Rd |only civis-2.1.2/civis/man/files_post_preprocess_csv.Rd |only civis-2.1.2/civis/man/files_put_preprocess_csv.Rd |only civis-2.1.2/civis/man/files_put_preprocess_csv_archive.Rd |only civis-2.1.2/civis/man/files_put_shares_groups.Rd | 9 civis-2.1.2/civis/man/files_put_shares_users.Rd | 9 civis-2.1.2/civis/man/get_job_type_version.Rd |only civis-2.1.2/civis/man/get_script_fun.Rd | 3 civis-2.1.2/civis/man/get_table_id.Rd | 5 civis-2.1.2/civis/man/get_template_ids_all_versions.Rd |only civis-2.1.2/civis/man/get_train_template_id.Rd |only civis-2.1.2/civis/man/git_repos_list.Rd | 3 civis-2.1.2/civis/man/groups_delete.Rd |only civis-2.1.2/civis/man/groups_delete_members.Rd |only civis-2.1.2/civis/man/groups_delete_shares_groups.Rd |only civis-2.1.2/civis/man/groups_delete_shares_users.Rd |only civis-2.1.2/civis/man/groups_get.Rd |only civis-2.1.2/civis/man/groups_list.Rd | 25 civis-2.1.2/civis/man/groups_list_shares.Rd |only civis-2.1.2/civis/man/groups_patch.Rd |only civis-2.1.2/civis/man/groups_post.Rd |only civis-2.1.2/civis/man/groups_put.Rd |only civis-2.1.2/civis/man/groups_put_members.Rd |only civis-2.1.2/civis/man/groups_put_shares_groups.Rd |only civis-2.1.2/civis/man/groups_put_shares_users.Rd |only civis-2.1.2/civis/man/imports_get.Rd | 4 civis-2.1.2/civis/man/imports_get_files_csv.Rd | 3 civis-2.1.2/civis/man/imports_list.Rd | 20 civis-2.1.2/civis/man/imports_list_batches.Rd | 9 civis-2.1.2/civis/man/imports_list_files_runs.Rd | 9 civis-2.1.2/civis/man/imports_patch_files_csv.Rd | 29 civis-2.1.2/civis/man/imports_post.Rd | 25 civis-2.1.2/civis/man/imports_post_batches.Rd | 14 civis-2.1.2/civis/man/imports_post_files.Rd | 22 civis-2.1.2/civis/man/imports_post_files_csv.Rd | 29 civis-2.1.2/civis/man/imports_post_syncs.Rd | 6 civis-2.1.2/civis/man/imports_put.Rd | 24 civis-2.1.2/civis/man/imports_put_archive.Rd | 4 civis-2.1.2/civis/man/imports_put_files_csv.Rd | 29 civis-2.1.2/civis/man/imports_put_files_csv_archive.Rd | 3 civis-2.1.2/civis/man/imports_put_shares_groups.Rd | 9 civis-2.1.2/civis/man/imports_put_shares_users.Rd | 9 civis-2.1.2/civis/man/imports_put_syncs.Rd | 9 civis-2.1.2/civis/man/imports_put_syncs_archive.Rd | 3 civis-2.1.2/civis/man/jobs_list.Rd | 16 civis-2.1.2/civis/man/jobs_list_runs.Rd | 9 civis-2.1.2/civis/man/jobs_list_runs_outputs.Rd | 10 civis-2.1.2/civis/man/jobs_put_archive.Rd |only civis-2.1.2/civis/man/jobs_put_shares_groups.Rd | 9 civis-2.1.2/civis/man/jobs_put_shares_users.Rd | 9 civis-2.1.2/civis/man/json_values_patch.Rd | 2 civis-2.1.2/civis/man/json_values_post.Rd | 2 civis-2.1.2/civis/man/json_values_put_shares_groups.Rd | 9 civis-2.1.2/civis/man/json_values_put_shares_users.Rd | 9 civis-2.1.2/civis/man/match_targets_delete_shares_groups.Rd |only civis-2.1.2/civis/man/match_targets_delete_shares_users.Rd |only civis-2.1.2/civis/man/match_targets_get.Rd | 3 civis-2.1.2/civis/man/match_targets_list.Rd | 3 civis-2.1.2/civis/man/match_targets_list_shares.Rd |only civis-2.1.2/civis/man/match_targets_patch.Rd | 16 civis-2.1.2/civis/man/match_targets_post.Rd | 15 civis-2.1.2/civis/man/match_targets_put_archive.Rd |only civis-2.1.2/civis/man/match_targets_put_shares_groups.Rd |only civis-2.1.2/civis/man/match_targets_put_shares_users.Rd |only civis-2.1.2/civis/man/media_list_optimizations.Rd | 9 civis-2.1.2/civis/man/media_list_optimizations_runs.Rd | 9 civis-2.1.2/civis/man/media_list_optimizations_runs_logs.Rd | 3 civis-2.1.2/civis/man/media_list_ratecards.Rd | 3 civis-2.1.2/civis/man/media_list_targets.Rd | 3 civis-2.1.2/civis/man/media_patch_optimizations.Rd | 13 civis-2.1.2/civis/man/media_patch_ratecards.Rd | 9 civis-2.1.2/civis/man/media_post_optimizations.Rd | 12 civis-2.1.2/civis/man/media_put_optimizations_shares_groups.Rd | 9 civis-2.1.2/civis/man/media_put_optimizations_shares_users.Rd | 9 civis-2.1.2/civis/man/media_put_ratecards_shares_groups.Rd | 9 civis-2.1.2/civis/man/media_put_ratecards_shares_users.Rd | 9 civis-2.1.2/civis/man/media_put_spot_orders_shares_groups.Rd | 9 civis-2.1.2/civis/man/media_put_spot_orders_shares_users.Rd | 9 civis-2.1.2/civis/man/models_list.Rd | 17 civis-2.1.2/civis/man/models_list_builds.Rd | 9 civis-2.1.2/civis/man/models_patch.Rd | 32 civis-2.1.2/civis/man/models_post.Rd | 32 civis-2.1.2/civis/man/models_put_predictions.Rd | 10 civis-2.1.2/civis/man/models_put_shares_groups.Rd | 9 civis-2.1.2/civis/man/models_put_shares_users.Rd | 9 civis-2.1.2/civis/man/multipart_upload.Rd | 3 civis-2.1.2/civis/man/notebooks_list.Rd | 13 civis-2.1.2/civis/man/notebooks_list_deployments.Rd | 10 civis-2.1.2/civis/man/notebooks_list_deployments_logs.Rd | 9 civis-2.1.2/civis/man/notebooks_list_git.Rd | 1 civis-2.1.2/civis/man/notebooks_patch.Rd | 27 civis-2.1.2/civis/man/notebooks_post.Rd | 27 civis-2.1.2/civis/man/notebooks_post_deployments.Rd | 3 civis-2.1.2/civis/man/notebooks_put.Rd | 27 civis-2.1.2/civis/man/notebooks_put_git.Rd | 13 civis-2.1.2/civis/man/notebooks_put_shares_groups.Rd | 9 civis-2.1.2/civis/man/notebooks_put_shares_users.Rd | 9 civis-2.1.2/civis/man/predictions_list_runs.Rd | 9 civis-2.1.2/civis/man/predictions_patch.Rd | 8 civis-2.1.2/civis/man/predictions_put_schedules.Rd | 3 civis-2.1.2/civis/man/projects_delete_parent_projects.Rd |only civis-2.1.2/civis/man/projects_get.Rd | 32 civis-2.1.2/civis/man/projects_list.Rd | 13 civis-2.1.2/civis/man/projects_list_parent_projects.Rd |only civis-2.1.2/civis/man/projects_post.Rd | 32 civis-2.1.2/civis/man/projects_put.Rd | 43 civis-2.1.2/civis/man/projects_put_archive.Rd | 32 civis-2.1.2/civis/man/projects_put_parent_projects.Rd |only civis-2.1.2/civis/man/projects_put_shares_groups.Rd | 9 civis-2.1.2/civis/man/projects_put_shares_users.Rd | 9 civis-2.1.2/civis/man/publish_html.Rd | 9 civis-2.1.2/civis/man/publish_rmd.Rd | 10 civis-2.1.2/civis/man/queries_list.Rd | 14 civis-2.1.2/civis/man/queries_list_runs.Rd | 9 civis-2.1.2/civis/man/queries_post.Rd | 17 civis-2.1.2/civis/man/query_civis.Rd | 14 civis-2.1.2/civis/man/query_civis_file.Rd | 41 civis-2.1.2/civis/man/read_civis.Rd | 21 civis-2.1.2/civis/man/refresh_table.Rd | 5 civis-2.1.2/civis/man/remote_hosts_list_data_sets.Rd | 10 civis-2.1.2/civis/man/remote_hosts_post_authenticate.Rd | 8 civis-2.1.2/civis/man/reports_list.Rd | 14 civis-2.1.2/civis/man/reports_list_git.Rd | 1 civis-2.1.2/civis/man/reports_patch.Rd | 14 civis-2.1.2/civis/man/reports_post.Rd | 12 civis-2.1.2/civis/man/reports_post_refresh.Rd |only civis-2.1.2/civis/man/reports_put_git.Rd | 13 civis-2.1.2/civis/man/reports_put_services_shares_groups.Rd | 9 civis-2.1.2/civis/man/reports_put_services_shares_users.Rd | 9 civis-2.1.2/civis/man/reports_put_shares_groups.Rd | 9 civis-2.1.2/civis/man/reports_put_shares_users.Rd | 9 civis-2.1.2/civis/man/run_civis.Rd | 7 civis-2.1.2/civis/man/run_template.Rd | 7 civis-2.1.2/civis/man/saml_service_providers_put_shares_groups.Rd | 9 civis-2.1.2/civis/man/saml_service_providers_put_shares_users.Rd | 9 civis-2.1.2/civis/man/scripts_get_containers.Rd | 6 civis-2.1.2/civis/man/scripts_get_python3.Rd | 4 civis-2.1.2/civis/man/scripts_get_r.Rd | 4 civis-2.1.2/civis/man/scripts_get_sql.Rd | 1 civis-2.1.2/civis/man/scripts_list.Rd | 15 civis-2.1.2/civis/man/scripts_list_containers_runs.Rd | 9 civis-2.1.2/civis/man/scripts_list_containers_runs_logs.Rd | 3 civis-2.1.2/civis/man/scripts_list_containers_runs_outputs.Rd | 10 civis-2.1.2/civis/man/scripts_list_custom.Rd | 14 civis-2.1.2/civis/man/scripts_list_custom_runs.Rd | 9 civis-2.1.2/civis/man/scripts_list_custom_runs_outputs.Rd | 10 civis-2.1.2/civis/man/scripts_list_javascript_git.Rd | 1 civis-2.1.2/civis/man/scripts_list_javascript_runs.Rd | 9 civis-2.1.2/civis/man/scripts_list_javascript_runs_logs.Rd | 3 civis-2.1.2/civis/man/scripts_list_javascript_runs_outputs.Rd | 10 civis-2.1.2/civis/man/scripts_list_python3_git.Rd | 1 civis-2.1.2/civis/man/scripts_list_python3_runs.Rd | 9 civis-2.1.2/civis/man/scripts_list_python3_runs_logs.Rd | 3 civis-2.1.2/civis/man/scripts_list_python3_runs_outputs.Rd | 10 civis-2.1.2/civis/man/scripts_list_r_git.Rd | 1 civis-2.1.2/civis/man/scripts_list_r_runs.Rd | 9 civis-2.1.2/civis/man/scripts_list_r_runs_outputs.Rd | 10 civis-2.1.2/civis/man/scripts_list_sql_git.Rd | 1 civis-2.1.2/civis/man/scripts_list_sql_runs.Rd | 9 civis-2.1.2/civis/man/scripts_list_sql_runs_outputs.Rd | 10 civis-2.1.2/civis/man/scripts_patch.Rd | 14 civis-2.1.2/civis/man/scripts_patch_containers.Rd | 42 civis-2.1.2/civis/man/scripts_patch_custom.Rd | 16 civis-2.1.2/civis/man/scripts_patch_javascript.Rd | 21 civis-2.1.2/civis/man/scripts_patch_python3.Rd | 32 civis-2.1.2/civis/man/scripts_patch_r.Rd | 32 civis-2.1.2/civis/man/scripts_patch_sql.Rd | 24 civis-2.1.2/civis/man/scripts_post.Rd | 14 civis-2.1.2/civis/man/scripts_post_containers.Rd | 42 civis-2.1.2/civis/man/scripts_post_containers_clone.Rd | 14 civis-2.1.2/civis/man/scripts_post_containers_runs_logs.Rd | 10 civis-2.1.2/civis/man/scripts_post_custom.Rd | 17 civis-2.1.2/civis/man/scripts_post_custom_clone.Rd | 8 civis-2.1.2/civis/man/scripts_post_javascript.Rd | 21 civis-2.1.2/civis/man/scripts_post_javascript_clone.Rd | 8 civis-2.1.2/civis/man/scripts_post_python3.Rd | 32 civis-2.1.2/civis/man/scripts_post_python3_clone.Rd | 12 civis-2.1.2/civis/man/scripts_post_r.Rd | 32 civis-2.1.2/civis/man/scripts_post_r_clone.Rd | 12 civis-2.1.2/civis/man/scripts_post_sql.Rd | 24 civis-2.1.2/civis/man/scripts_post_sql_clone.Rd | 9 civis-2.1.2/civis/man/scripts_put_containers.Rd | 42 civis-2.1.2/civis/man/scripts_put_containers_archive.Rd | 6 civis-2.1.2/civis/man/scripts_put_containers_shares_groups.Rd | 9 civis-2.1.2/civis/man/scripts_put_containers_shares_users.Rd | 9 civis-2.1.2/civis/man/scripts_put_custom.Rd | 16 civis-2.1.2/civis/man/scripts_put_custom_shares_groups.Rd | 9 civis-2.1.2/civis/man/scripts_put_custom_shares_users.Rd | 9 civis-2.1.2/civis/man/scripts_put_javascript.Rd | 20 civis-2.1.2/civis/man/scripts_put_javascript_git.Rd | 13 civis-2.1.2/civis/man/scripts_put_javascript_shares_groups.Rd | 9 civis-2.1.2/civis/man/scripts_put_javascript_shares_users.Rd | 9 civis-2.1.2/civis/man/scripts_put_python3.Rd | 32 civis-2.1.2/civis/man/scripts_put_python3_archive.Rd | 4 civis-2.1.2/civis/man/scripts_put_python3_git.Rd | 13 civis-2.1.2/civis/man/scripts_put_python3_shares_groups.Rd | 9 civis-2.1.2/civis/man/scripts_put_python3_shares_users.Rd | 9 civis-2.1.2/civis/man/scripts_put_r.Rd | 32 civis-2.1.2/civis/man/scripts_put_r_archive.Rd | 4 civis-2.1.2/civis/man/scripts_put_r_git.Rd | 13 civis-2.1.2/civis/man/scripts_put_r_shares_groups.Rd | 9 civis-2.1.2/civis/man/scripts_put_r_shares_users.Rd | 9 civis-2.1.2/civis/man/scripts_put_sql.Rd | 24 civis-2.1.2/civis/man/scripts_put_sql_archive.Rd | 1 civis-2.1.2/civis/man/scripts_put_sql_git.Rd | 13 civis-2.1.2/civis/man/scripts_put_sql_shares_groups.Rd | 9 civis-2.1.2/civis/man/scripts_put_sql_shares_users.Rd | 9 civis-2.1.2/civis/man/search_list.Rd | 13 civis-2.1.2/civis/man/services_list.Rd | 13 civis-2.1.2/civis/man/services_list_deployments.Rd | 10 civis-2.1.2/civis/man/services_list_deployments_logs.Rd | 9 civis-2.1.2/civis/man/services_patch.Rd | 28 civis-2.1.2/civis/man/services_post.Rd | 29 civis-2.1.2/civis/man/services_post_deployments.Rd | 3 civis-2.1.2/civis/man/services_post_redeploy.Rd | 3 civis-2.1.2/civis/man/services_put.Rd | 28 civis-2.1.2/civis/man/services_put_shares_groups.Rd | 9 civis-2.1.2/civis/man/services_put_shares_users.Rd | 9 civis-2.1.2/civis/man/stash_local_dataframe.Rd | 4 civis-2.1.2/civis/man/storage_hosts_get.Rd | 8 civis-2.1.2/civis/man/storage_hosts_list.Rd | 8 civis-2.1.2/civis/man/storage_hosts_patch.Rd | 17 civis-2.1.2/civis/man/storage_hosts_post.Rd | 8 civis-2.1.2/civis/man/storage_hosts_put.Rd | 8 civis-2.1.2/civis/man/storage_hosts_put_shares_groups.Rd | 9 civis-2.1.2/civis/man/storage_hosts_put_shares_users.Rd | 9 civis-2.1.2/civis/man/tables_list.Rd | 13 civis-2.1.2/civis/man/tables_list_columns.Rd | 10 civis-2.1.2/civis/man/tables_patch.Rd | 9 civis-2.1.2/civis/man/tables_post_enhancements_cass_ncoa.Rd | 8 civis-2.1.2/civis/man/tables_post_enhancements_prepared_matchings.Rd | 8 civis-2.1.2/civis/man/tables_post_enhancements_table_matchings.Rd | 8 civis-2.1.2/civis/man/templates_list_reports.Rd | 10 civis-2.1.2/civis/man/templates_list_scripts.Rd | 10 civis-2.1.2/civis/man/templates_patch_reports.Rd | 10 civis-2.1.2/civis/man/templates_patch_scripts.Rd | 9 civis-2.1.2/civis/man/templates_post_reports.Rd | 10 civis-2.1.2/civis/man/templates_post_reports_review.Rd |only civis-2.1.2/civis/man/templates_post_scripts.Rd | 10 civis-2.1.2/civis/man/templates_post_scripts_review.Rd |only civis-2.1.2/civis/man/templates_put_reports.Rd | 10 civis-2.1.2/civis/man/templates_put_reports_shares_groups.Rd | 9 civis-2.1.2/civis/man/templates_put_reports_shares_users.Rd | 9 civis-2.1.2/civis/man/templates_put_scripts.Rd | 9 civis-2.1.2/civis/man/templates_put_scripts_shares_groups.Rd | 9 civis-2.1.2/civis/man/templates_put_scripts_shares_users.Rd | 9 civis-2.1.2/civis/man/transfer_table.Rd | 21 civis-2.1.2/civis/man/users_delete_me_favorites.Rd |only civis-2.1.2/civis/man/users_get.Rd | 16 civis-2.1.2/civis/man/users_list.Rd | 17 civis-2.1.2/civis/man/users_list_api_keys.Rd | 9 civis-2.1.2/civis/man/users_list_me_favorites.Rd |only civis-2.1.2/civis/man/users_list_me_ui.Rd |only civis-2.1.2/civis/man/users_patch.Rd |only civis-2.1.2/civis/man/users_patch_me.Rd | 2 civis-2.1.2/civis/man/users_post.Rd |only civis-2.1.2/civis/man/users_post_me_favorites.Rd |only civis-2.1.2/civis/man/workflows_get.Rd | 1 civis-2.1.2/civis/man/workflows_list.Rd | 19 civis-2.1.2/civis/man/workflows_list_executions.Rd | 9 civis-2.1.2/civis/man/workflows_list_git.Rd | 1 civis-2.1.2/civis/man/workflows_patch.Rd | 14 civis-2.1.2/civis/man/workflows_post.Rd | 15 civis-2.1.2/civis/man/workflows_post_clone.Rd | 4 civis-2.1.2/civis/man/workflows_post_executions.Rd | 8 civis-2.1.2/civis/man/workflows_put.Rd | 13 civis-2.1.2/civis/man/workflows_put_archive.Rd | 1 civis-2.1.2/civis/man/workflows_put_git.Rd | 13 civis-2.1.2/civis/man/workflows_put_shares_groups.Rd | 9 civis-2.1.2/civis/man/workflows_put_shares_users.Rd | 9 civis-2.1.2/civis/man/write_civis.Rd | 81 civis-2.1.2/civis/man/write_civis_file.Rd | 25 civis-2.1.2/civis/tests/testthat/test_civis_ml.R | 75 civis-2.1.2/civis/tests/testthat/test_civis_ml_utils.R | 123 civis-2.1.2/civis/tests/testthat/test_io.R | 18 civis-2.1.2/civis/tests/testthat/test_utils.R | 7 civis-2.1.2/civis/tools/integration_tests/smoke_test.R | 6 civis-2.1.2/civis/vignettes/civis_ml.Rmd | 109 457 files changed, 8017 insertions(+), 4279 deletions(-)
Title: Ceteris Paribus Profiles
Description: Ceteris Paribus Profiles (What-If Plots) are designed to present model
responses around selected points in a feature space.
For example around a single prediction for an interesting observation.
Plots are designed to work in a model-agnostic fashion, they are working
for any predictive Machine Learning model and allow for model comparisons.
Ceteris Paribus Plots supplement the Break Down Plots from 'breakDown' package.
Author: Przemyslaw Biecek [aut, cre] (<https://orcid.org/0000-0001-8423-1823>)
Maintainer: Przemyslaw Biecek <przemyslaw.biecek@gmail.com>
Diff between ceterisParibus versions 0.3.1 dated 2019-01-29 and 0.4.1 dated 2020-02-24
ceterisParibus-0.3.1/ceterisParibus/build |only ceterisParibus-0.3.1/ceterisParibus/inst |only ceterisParibus-0.3.1/ceterisParibus/vignettes |only ceterisParibus-0.4.1/ceterisParibus/DESCRIPTION | 9 - ceterisParibus-0.4.1/ceterisParibus/MD5 | 66 +++------- ceterisParibus-0.4.1/ceterisParibus/NAMESPACE | 2 ceterisParibus-0.4.1/ceterisParibus/R/plot_ceteris_paribus.R | 6 ceterisParibus-0.4.1/ceterisParibus/R/plot_ceteris_paribus_oscillations.R | 4 ceterisParibus-0.4.1/ceterisParibus/R/plot_coral_plots.R | 2 ceterisParibus-0.4.1/ceterisParibus/R/plot_interactive_what_if.R | 2 ceterisParibus-0.4.1/ceterisParibus/R/plot_what_if.R | 4 ceterisParibus-0.4.1/ceterisParibus/README.md |only ceterisParibus-0.4.1/ceterisParibus/man/calculate_profiles.Rd | 9 + ceterisParibus-0.4.1/ceterisParibus/man/calculate_profiles_lce.Rd | 10 + ceterisParibus-0.4.1/ceterisParibus/man/calculate_variable_splits.Rd | 3 ceterisParibus-0.4.1/ceterisParibus/man/ceteris_paribus.Rd | 10 + ceterisParibus-0.4.1/ceterisParibus/man/ceteris_paribus_layer.Rd | 34 +++-- ceterisParibus-0.4.1/ceterisParibus/man/local_conditional_expectations.Rd | 10 + ceterisParibus-0.4.1/ceterisParibus/man/local_fit.Rd | 9 + ceterisParibus-0.4.1/ceterisParibus/man/plot.ceteris_paribus_explainer.Rd | 33 +++-- ceterisParibus-0.4.1/ceterisParibus/man/plot.local_fit_explainer.Rd | 3 ceterisParibus-0.4.1/ceterisParibus/man/plot.what_if_2d_explainer.Rd | 12 + ceterisParibus-0.4.1/ceterisParibus/man/plot.what_if_explainer.Rd | 10 + ceterisParibus-0.4.1/ceterisParibus/man/plot_interactive.Rd | 6 ceterisParibus-0.4.1/ceterisParibus/man/select_neighbours.Rd | 10 + ceterisParibus-0.4.1/ceterisParibus/man/what_if.Rd | 3 ceterisParibus-0.4.1/ceterisParibus/man/what_if_2d.Rd | 8 - 27 files changed, 162 insertions(+), 103 deletions(-)
More information about ceterisParibus at CRAN
Permanent link
Title: Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for
Phylogenetic Comparative Hypotheses
Description: Fits multivariate Ornstein-Uhlenbeck types of models to continues trait data from species related by a common evolutionary history. See K. Bartoszek, J, Pienaar, P. Mostad, S. Andersson, T. F.Hansen (2012) <doi:10.1016/j.jtbi.2012.08.005>. The suggested PCMBaseCpp package (which significantly speeds up the likelihood calculations) can be obtained from <https://github.com/venelin/PCMBaseCpp/>.
Author: Krzysztof Bartoszek <krzbar@protonmail.ch>
Maintainer: Krzysztof Bartoszek <krzbar@protonmail.ch>
Diff between mvSLOUCH versions 2.3 dated 2020-02-06 and 2.4 dated 2020-02-24
DESCRIPTION | 8 +++--- MD5 | 32 ++++++++++++------------- R/evolmodelest.R | 18 +++++++++----- R/loglik.R | 8 +++--- R/wrappers.R | 8 ++++++ man/BrownianMotionModel.Rd | 40 +------------------------------ man/SummarizeBM.Rd | 42 +++------------------------------ man/SummarizeMVSLOUCH.Rd | 43 ++------------------------------- man/SummarizeOUCH.Rd | 41 +------------------------------- man/estimate.evolutionary.model.Rd | 43 +++------------------------------ man/mvSLOUCH-package.Rd | 41 ++------------------------------ man/mvslouchModel.Rd | 44 ++-------------------------------- man/ouchModel.Rd | 40 +------------------------------ man/parametric.bootstrap.Rd | 47 +------------------------------------ man/simulBMProcPhylTree.Rd | 41 +------------------------------- man/simulMVSLOUCHProcPhylTree.Rd | 37 ----------------------------- man/simulOUCHProcPhylTree.Rd | 39 +----------------------------- 17 files changed, 74 insertions(+), 498 deletions(-)
Title: Analyze Clustered Data with Generalized Linear Models using the
Cluster Bootstrap
Description: Provides functionality for the analysis of clustered data using the cluster bootstrap.
Author: Mathijs Deen [aut, cre],
Mark de Rooij [aut]
Maintainer: Mathijs Deen <m.l.deen@fsw.leidenuniv.nl>
Diff between ClusterBootstrap versions 1.0.0 dated 2018-06-26 and 1.1.0 dated 2020-02-24
DESCRIPTION | 15 ++++++++------- LICENSE |only MD5 | 32 +++++++++++++++++++++----------- NAMESPACE | 25 ++++++++++++++++++++++++- NEWS | 8 ++++++++ R/additional_exports.R | 2 +- R/clusbootemm.R |only R/clusbootglm.R | 2 +- R/clusbootglm_internals.R | 5 ++++- R/medication-data.R | 2 +- R/permutationtest.R |only README.md |only inst |only man/clusbootglm.Rd | 11 +++++++++-- man/confint.clusbootglm.Rd | 3 +-- man/emm.Rd |only man/medication.Rd | 2 +- man/plot.clusbootemm.Rd |only man/plot.clusbootptest.Rd |only man/ptest.Rd |only man/summary.clusbootemm.Rd |only man/summary.clusbootglm.Rd | 3 +-- 22 files changed, 80 insertions(+), 30 deletions(-)
More information about ClusterBootstrap at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-02-05 0.3.2
2017-07-31 0.3.1
2017-04-10 0.3.0
2016-09-24 0.2.7
2016-07-11 0.2.6
2015-07-12 0.2.5
2014-07-29 0.2.3
2014-07-07 0.2.2
2014-07-03 0.2.1
Title: Stepwise Regression Analysis
Description: Stepwise regression analysis for variable selection can be used to get the best candidate final regression model with the forward selection, backward elimination and bidirectional elimination approaches. Best subset selection fit a separate least squares regression for each possible combination of all predictors. Both the above two procedures in this package can use weighted data to get best regression model in univariate regression and multivariate regression analysis(Alsubaihi, A. A., (2002) <doi:10.18637/jss.v007.i12>). And continuous variables nested within class effect is also considered in both two procedures. Also stepwise logistic regression in this package can performed with binary dependent variable(Agresti, A. (1984) <doi:10.1002/9780470594001> and Agresti, A. (2014) <doi:10.1007/978-3-642-04898-2_161>). A widely used selection criteria are available which includes Akaike information criterion(Darlington, R. B. (1968) <doi:10.1037/h0025471>, Judge, G. G. (1985) <doi:10.2307/1391738>), corrected Akaike information criterion(Hurvich, C. M., and Tsai, C. (1989) <doi:10.1093/biomet/76.2.297>), Bayesian information criterion(Sawa, T. (1978) <doi:10.2307/1913828>, Judge, G. G. (1985) <doi:10.2307/1391738>), Mallows Cp statistic(Mallows, C. L. (1973) <doi:10.1080/00401706.1995.10484370>, Hocking, R. R. (1976) <doi:10.2307/2529336>), Hannan and Quinn information criterion(Hannan, E. J. and Quinn, B. G. (1979) <doi:10.1111/j.2517-6161.1979.tb01072.x>, Mcquarrie, A. D. R. and Tsai, C. L. (1998) <doi:10.1142/3573>), corrected Hannan and Quinn information criterion(Mcquarrie, A. D. R. and Tsai, C. L. (1998) <doi:10.1142/3573>), Schwarz criterion(Schwarz, G. (1978) <doi:10.1214/aos/1176344136>, Judge, G. G. (1985) <doi:10.2307/1391738>), adjusted R-square statistic(Darlington, R. B. (1968) <doi:10.1037/h0025471>, Judge, G. G. (1985) <doi:10.2307/1391738>) and significance levels(Mckeon, J. J. (1974) <doi:10.1093/biomet/61.2.381>, Harold Hotelling. (1992) <doi:10.1007/978-1-4612-0919-5_4>, Pillai, K. C. S. (2006) <doi:10.1002/0471667196.ess1965.pub2>), where multicollinearity can be detected with checking tolerance value.
Author: Junhui Li,Xiaohuan Lu,Kun Cheng,Wenxin Liu
Maintainer: Junhui Li <junhuili@cau.edu.cn>
Diff between StepReg versions 1.3.4 dated 2020-01-08 and 1.4.0 dated 2020-02-24
DESCRIPTION | 13 +++++++------ MD5 | 12 +++++++----- NAMESPACE | 4 +++- R/stepwise.R | 23 ++++++++++++++++------- R/stepwiselogit.R |only man/StepReg-package.Rd | 12 +++++++++--- man/stepwise.Rd | 4 ++-- man/stepwiselogit.Rd |only 8 files changed, 44 insertions(+), 24 deletions(-)
Title: Plane Geometry
Description: An extensive set of plane geometry routines. Provides R6 classes representing triangles, circles, circular arcs, ellipses, elliptical arcs and lines, and their plot methods. Also provides R6 classes representing transformations: rotations, reflections, homotheties, scalings, general affine transformations, inversions, Möbius transformations.
Author: Stéphane Laurent
Maintainer: Stéphane Laurent <laurent_step@outlook.fr>
Diff between PlaneGeometry versions 1.0.0 dated 2020-02-11 and 1.1.0 dated 2020-02-24
DESCRIPTION | 8 MD5 | 50 ++-- NAMESPACE | 9 NEWS.md | 19 + R/Circle.R | 158 ++++++++++++++ R/Ellipse.R | 6 R/Inversion.R | 76 ++++++ R/Line.R | 17 + R/Mobius.R | 55 ++++- R/Triangle.R | 376 +++++++++++++++++++++++++++++++++- R/internal.R | 27 ++ inst/doc/examples.R | 63 ++++- inst/doc/examples.Rmd | 86 ++++++- inst/doc/examples.html | 69 ++++-- man/Circle.Rd | 58 +++++ man/CircleAB.Rd |only man/Line.Rd | 40 +++ man/Mobius.Rd | 44 +++- man/Triangle.Rd | 404 ++++++++++++++++++++++++++++++++++++- man/inversionFromCircle.Rd |only man/inversionSwappingTwoCircles.Rd | 4 man/midCircles.Rd |only man/unitCircle.Rd | 2 tests/testthat/test-inversions.R | 76 ++++++ tests/testthat/test-midcircles.R |only tests/testthat/test-mobius.R | 29 ++ tests/testthat/test-triangle.R | 125 +++++++++++ vignettes/examples.Rmd | 86 ++++++- 28 files changed, 1754 insertions(+), 133 deletions(-)
Title: Bayesian Analysis, No Gibbs
Description: Provides functions for the Bayesian analysis of some simple
commonly-used models, without using Markov Chain Monte Carlo (MCMC)
methods such as Gibbs sampling. The 'rust' package
<https://cran.r-project.org/package=rust> is used to simulate a random
sample from the required posterior distribution, using the generalized
ratio-of-uniforms method. See Wakefield, Gelfand and Smith (1991)
<DOI:10.1007/BF01889987> for details. At the moment three conjugate
hierarchical models are available: beta-binomial, gamma-Poisson and a 1-way
analysis of variance (ANOVA).
Author: Paul J. Northrop [aut, cre, cph],
Benjamin D. Hall [aut, cph]
Maintainer: Paul J. Northrop <p.northrop@ucl.ac.uk>
Diff between bang versions 1.0.0 dated 2017-11-20 and 1.0.1 dated 2020-02-24
bang-1.0.0/bang/inst/doc/bang-anova-vignette.R |only bang-1.0.0/bang/inst/doc/bang-anova-vignette.Rmd |only bang-1.0.0/bang/inst/doc/bang-anova-vignette.html |only bang-1.0.0/bang/inst/doc/bang-hef-vignette.R |only bang-1.0.0/bang/inst/doc/bang-hef-vignette.Rmd |only bang-1.0.0/bang/inst/doc/bang-hef-vignette.html |only bang-1.0.0/bang/inst/doc/bang-ppc-vignette.R |only bang-1.0.0/bang/inst/doc/bang-ppc-vignette.Rmd |only bang-1.0.0/bang/inst/doc/bang-ppc-vignette.html |only bang-1.0.0/bang/inst/doc/bang-vignette.R |only bang-1.0.0/bang/inst/doc/bang-vignette.Rmd |only bang-1.0.0/bang/inst/doc/bang-vignette.html |only bang-1.0.0/bang/vignettes/bang-anova-vignette.Rmd |only bang-1.0.0/bang/vignettes/bang-hef-vignette.Rmd |only bang-1.0.0/bang/vignettes/bang-ppc-vignette.Rmd |only bang-1.0.0/bang/vignettes/bang-vignette.Rmd |only bang-1.0.1/bang/DESCRIPTION | 34 bang-1.0.1/bang/MD5 | 90 - bang-1.0.1/bang/NAMESPACE | 2 bang-1.0.1/bang/NEWS.md |only bang-1.0.1/bang/R/bang.R | 426 +++---- bang-1.0.1/bang/R/bayesplot.R | 277 ++-- bang-1.0.1/bang/R/beta_prior.R | 2 bang-1.0.1/bang/R/binom_beta.R | 2 bang-1.0.1/bang/R/gamma_prior.R | 2 bang-1.0.1/bang/R/hef.R | 669 +++++------ bang-1.0.1/bang/R/one_way_anova.R | 1215 +++++++++----------- bang-1.0.1/bang/R/plot_summary_print.R | 847 +++++++------ bang-1.0.1/bang/R/pois_gamma.R | 182 +- bang-1.0.1/bang/R/set_and_check_prior.R | 247 ++-- bang-1.0.1/bang/README.md | 8 bang-1.0.1/bang/build/vignette.rds |binary bang-1.0.1/bang/data/weight_gain.rda |only bang-1.0.1/bang/inst/doc/bang-a-vignette.R |only bang-1.0.1/bang/inst/doc/bang-a-vignette.Rmd |only bang-1.0.1/bang/inst/doc/bang-a-vignette.html |only bang-1.0.1/bang/inst/doc/bang-b-hef-vignette.R |only bang-1.0.1/bang/inst/doc/bang-b-hef-vignette.Rmd |only bang-1.0.1/bang/inst/doc/bang-b-hef-vignette.html |only bang-1.0.1/bang/inst/doc/bang-c-anova-vignette.R |only bang-1.0.1/bang/inst/doc/bang-c-anova-vignette.Rmd |only bang-1.0.1/bang/inst/doc/bang-c-anova-vignette.html |only bang-1.0.1/bang/inst/doc/bang-d-ppc-vignette.R |only bang-1.0.1/bang/inst/doc/bang-d-ppc-vignette.Rmd |only bang-1.0.1/bang/inst/doc/bang-d-ppc-vignette.html |only bang-1.0.1/bang/man/bang.Rd | 6 bang-1.0.1/bang/man/hanova1.Rd | 10 bang-1.0.1/bang/man/hef.Rd | 10 bang-1.0.1/bang/man/plot.hef.Rd | 9 bang-1.0.1/bang/man/pp_check.hef.Rd | 18 bang-1.0.1/bang/man/print.hef.Rd | 2 bang-1.0.1/bang/man/print.summary.hef.Rd |only bang-1.0.1/bang/man/set_user_prior.Rd | 9 bang-1.0.1/bang/man/sim_pred_gamma_pois.Rd | 2 bang-1.0.1/bang/man/summary.hef.Rd | 11 bang-1.0.1/bang/man/temp1.Rd | 13 bang-1.0.1/bang/man/temp2.Rd | 13 bang-1.0.1/bang/man/weight_gain.Rd |only bang-1.0.1/bang/tests/testthat/test-hanova1.R | 10 bang-1.0.1/bang/vignettes/bang-a-vignette.Rmd |only bang-1.0.1/bang/vignettes/bang-b-hef-vignette.Rmd |only bang-1.0.1/bang/vignettes/bang-c-anova-vignette.Rmd |only bang-1.0.1/bang/vignettes/bang-d-ppc-vignette.Rmd |only bang-1.0.1/bang/vignettes/bang.bib | 368 +++--- 64 files changed, 2278 insertions(+), 2206 deletions(-)
Title: Antares Visualizations
Description: Visualize results generated by Antares, a powerful open source software
developed by RTE to simulate and study electric power systems
(more information about Antares here: <https://github.com/AntaresSimulatorTeam/Antares_Simulator>).
This package provides functions that create interactive charts to help
Antares users visually explore the results of their simulations.
Author: Veronique Bachelier [aut, cre],
Jalal-Edine Zawam [aut],
Francois Guillem [aut],
Benoit Thieurmel [aut],
Titouan Robert [aut],
Baptiste Seguinot [ctb],
RTE [cph]
Maintainer: Veronique Bachelier <veronique.bachelier@rte-france.com>
Diff between antaresViz versions 0.15.0 dated 2018-10-11 and 0.15.1 dated 2020-02-24
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Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-02-20 1.12.0
2017-08-17 1.11.0
2016-05-24 1.10.0
2015-03-30 1.9.1
2015-03-14 1.9
2014-08-26 1.6
2014-08-13 1.5
2014-07-23 1.4
2014-04-14 1.3
2014-03-24 1.2.6
2014-03-14 1.2.2
2014-03-04 1.2
2014-01-30 1.1.2
2014-01-21 1.1
2014-01-18 0.8
Title: Efficient Exact and Approximate Implementations of the Poisson
Binomial Distribution
Description: Implementations of multiple exact and approximate methods as described in Hong (2013) <doi:10.1016/j.csda.2012.10.006> and Biscarri et al. (2018) <doi:10.1016/j.csda.2018.01.007> for computing the probability mass, cumulative distribution and quantile functions, as well as generating random numbers for the Poisson binomial distribution.
Author: Florian Junge [aut, cre]
Maintainer: Florian Junge <florian.junge@h-da.de>
Diff between PoissonBinomial versions 1.0.2 dated 2020-02-17 and 1.0.2-1 dated 2020-02-24
DESCRIPTION | 12 ++++++------ MD5 | 22 +++++++++++----------- NEWS.md | 6 +++++- inst/doc/intro.R | 7 ++++--- inst/doc/intro.Rmd | 24 ++++++++++++------------ inst/doc/intro.html | 37 +++++++++++++++++++------------------ inst/doc/proc_approx.html | 16 ++++++++-------- inst/doc/proc_exact.html | 10 +++++----- inst/doc/use_with_rcpp.Rmd | 8 ++++---- inst/doc/use_with_rcpp.html | 8 ++++---- vignettes/intro.Rmd | 24 ++++++++++++------------ vignettes/use_with_rcpp.Rmd | 8 ++++---- 12 files changed, 94 insertions(+), 88 deletions(-)
More information about PoissonBinomial at CRAN
Permanent link
Title: Regression Standardization
Description: Contains functionality for regression standardization. Four general classes of models are allowed; generalized linear models, conditional generalized estimating equation models, Cox proportional hazards models and shared frailty gamma-Weibull models. Sjolander, A. (2016) <doi:10.1007/s10654-016-0157-3>.
Author: Arvid Sjolander and Elisabeth Dahlqwist
Maintainer: Arvid Sjolander <arvid.sjolander@ki.se>
Diff between stdReg versions 3.3.0 dated 2019-03-15 and 3.4.0 dated 2020-02-24
stdReg-3.3.0/stdReg/build |only stdReg-3.3.0/stdReg/man/stdReg-package.Rd |only stdReg-3.4.0/stdReg/DESCRIPTION | 13 - stdReg-3.4.0/stdReg/MD5 | 23 +-- stdReg-3.4.0/stdReg/NAMESPACE | 9 - stdReg-3.4.0/stdReg/R/sourcecode.R | 215 +++++++++++++++--------------- stdReg-3.4.0/stdReg/inst/NEWS.Rd | 25 +++ stdReg-3.4.0/stdReg/man/parfrailty.rd | 5 stdReg-3.4.0/stdReg/man/stdCoxph.Rd | 11 + stdReg-3.4.0/stdReg/man/stdGee.Rd | 9 + stdReg-3.4.0/stdReg/man/stdGlm.Rd | 6 stdReg-3.4.0/stdReg/man/stdParfrailty.rd | 16 +- stdReg-3.4.0/stdReg/man/summary.stdGee.Rd |only stdReg-3.4.0/stdReg/man/summary.stdGlm.Rd | 16 +- 14 files changed, 202 insertions(+), 146 deletions(-)
Title: Language Server Protocol
Description: An implementation of the Language Server Protocol
for R. The Language Server protocol is used by an editor client to
integrate features like auto completion. See
<https://microsoft.github.io/language-server-protocol> for details.
Author: Randy Lai [aut, cre],
Kun Ren [ctb]
Maintainer: Randy Lai <randy.cs.lai@gmail.com>
Diff between languageserver versions 0.3.3 dated 2020-01-08 and 0.3.4 dated 2020-02-24
languageserver-0.3.3/languageserver/man/DefinitionCache.Rd |only languageserver-0.3.3/languageserver/man/GlobalNameSpace.Rd |only languageserver-0.3.3/languageserver/man/Namespace.Rd |only languageserver-0.3.3/languageserver/tests/testthat/test-rmarkdown.R |only languageserver-0.3.4/languageserver/DESCRIPTION | 41 + languageserver-0.3.4/languageserver/MD5 | 95 +-- languageserver-0.3.4/languageserver/NEWS.md | 22 languageserver-0.3.4/languageserver/R/capabilities.R | 15 languageserver-0.3.4/languageserver/R/color.R |only languageserver-0.3.4/languageserver/R/completion.R | 37 + languageserver-0.3.4/languageserver/R/definition.R | 2 languageserver-0.3.4/languageserver/R/diagnostics.R | 32 - languageserver-0.3.4/languageserver/R/document.R | 115 +++- languageserver-0.3.4/languageserver/R/formatting.R | 99 +++ languageserver-0.3.4/languageserver/R/handlers-general.R | 15 languageserver-0.3.4/languageserver/R/handlers-langfeatures.R | 80 ++- languageserver-0.3.4/languageserver/R/handlers-textsync.R | 77 ++ languageserver-0.3.4/languageserver/R/highlight.R | 7 languageserver-0.3.4/languageserver/R/hover.R | 8 languageserver-0.3.4/languageserver/R/languagebase.R | 14 languageserver-0.3.4/languageserver/R/languageclient.R | 2 languageserver-0.3.4/languageserver/R/languageserver.R | 72 +- languageserver-0.3.4/languageserver/R/link.R |only languageserver-0.3.4/languageserver/R/log.R | 17 languageserver-0.3.4/languageserver/R/namespace.R | 265 ++++++---- languageserver-0.3.4/languageserver/R/protocol.R | 6 languageserver-0.3.4/languageserver/R/symbol.R | 151 +++++ languageserver-0.3.4/languageserver/R/task.R | 11 languageserver-0.3.4/languageserver/R/utils.R | 82 ++- languageserver-0.3.4/languageserver/R/workspace.R | 127 ++-- languageserver-0.3.4/languageserver/README.md | 87 ++- languageserver-0.3.4/languageserver/man/GlobalEnv.Rd |only languageserver-0.3.4/languageserver/man/PackageNamespace.Rd |only languageserver-0.3.4/languageserver/man/color_presentation_reply.Rd |only languageserver-0.3.4/languageserver/man/diagnose_file.Rd | 2 languageserver-0.3.4/languageserver/man/document_color_reply.Rd |only languageserver-0.3.4/languageserver/man/document_link_reply.Rd |only languageserver-0.3.4/languageserver/man/document_symbol_reply.Rd | 2 languageserver-0.3.4/languageserver/man/is_package.Rd | 8 languageserver-0.3.4/languageserver/man/languageserver-package.Rd | 15 languageserver-0.3.4/languageserver/man/on_type_formatting_reply.Rd |only languageserver-0.3.4/languageserver/man/parse_document.Rd | 2 languageserver-0.3.4/languageserver/man/text_document_selection_range.Rd |only languageserver-0.3.4/languageserver/man/tryCatchStack.Rd |only languageserver-0.3.4/languageserver/src/languageserver.c | 10 languageserver-0.3.4/languageserver/src/reader.c | 8 languageserver-0.3.4/languageserver/tests/testthat/helper-utils.R | 143 ++++- languageserver-0.3.4/languageserver/tests/testthat/test-color.R |only languageserver-0.3.4/languageserver/tests/testthat/test-completion.R | 99 +++ languageserver-0.3.4/languageserver/tests/testthat/test-definition.R | 91 +-- languageserver-0.3.4/languageserver/tests/testthat/test-formatting.R | 91 +++ languageserver-0.3.4/languageserver/tests/testthat/test-highlight.R |only languageserver-0.3.4/languageserver/tests/testthat/test-hover.R | 235 ++++++++ languageserver-0.3.4/languageserver/tests/testthat/test-link.R |only languageserver-0.3.4/languageserver/tests/testthat/test-lintr.R | 7 languageserver-0.3.4/languageserver/tests/testthat/test-signature.R | 32 + languageserver-0.3.4/languageserver/tests/testthat/test-symbol.R | 151 +++++ 57 files changed, 1831 insertions(+), 544 deletions(-)
More information about languageserver at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-11-25 0.1.2
2019-05-20 0.1.1
2019-03-08 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-10-11 0.1.3
2018-09-14 0.1.2
2018-03-05 0.1.1
2017-08-05 0.1
Title: Get XKCD Comic from R
Description: Visualize your favorite XKCD comic strip directly from
R. XKCD <https://xkcd.com> web comic content is provided under the Creative
Commons Attribution-NonCommercial 2.5 License.
Author: Paolo Sonego [aut, cph, cre] (<https://orcid.org/0000-0002-8576-0169>),
Mikko Korpela [aut]
Maintainer: Paolo Sonego <paolo.sonego@gmail.com>
Diff between RXKCD versions 1.8-2 dated 2017-03-31 and 1.9.2 dated 2020-02-24
RXKCD-1.8-2/RXKCD/inst/xkcd/xkcd.csv |only RXKCD-1.9.2/RXKCD/DESCRIPTION | 21 +++---- RXKCD-1.9.2/RXKCD/MD5 | 11 ++- RXKCD-1.9.2/RXKCD/NAMESPACE | 1 RXKCD-1.9.2/RXKCD/R/getXKCD.R | 99 ++++++++++++++++++++-------------- RXKCD-1.9.2/RXKCD/README.md |only RXKCD-1.9.2/RXKCD/inst/xkcd/rxkcd.rda |only RXKCD-1.9.2/RXKCD/man/getXKCD.Rd | 3 - 8 files changed, 80 insertions(+), 55 deletions(-)
Title: Directional Statistics
Description: A collection of functions for directional data (including massive, with millions of observations, data) analysis. Hypothesis testing, discriminant and regression analysis, MLE of distributions and more are included. The standard textbook for such data is the "Directional Statistics" by Mardia, K. V. and Jupp, P. E. (2000). Other references include a) Phillip J. Paine, Simon P. Preston Michail Tsagris and Andrew T. A. Wood (2018). An elliptically symmetric angular Gaussian distribution. Statistics and Computing 28(3): 689-697. <doi:10.1007/s11222-017-9756-4>. b) Tsagris M. and Alenazi A. (2019). Comparison of discriminant analysis methods on the sphere. Communications in Statistics: Case Studies, Data Analysis and Applications 5(4):467--491. <doi:10.1080/23737484.2019.1684854>. c) P. J. Paine, S. P. Preston, M. Tsagris and Andrew T. A. Wood (2019). Spherical regression models with general covariates and anisotropic errors. Statistics and Computing (to appear). <doi:10.1007/s11222-019-09872-2>.
Author: Michail Tsagris, Giorgos Athineou, Anamul Sajib, Eli Amson, Micah J. Waldstein
Maintainer: Michail Tsagris <mtsagris@uoc.gr>
Diff between Directional versions 4.1 dated 2020-01-07 and 4.2 dated 2020-02-24
DESCRIPTION | 8 +++---- MD5 | 31 +++++++++++++++++---------- R/embedcirc.perm.R |only R/etoa.R |only R/hcfcirc.perm.R |only R/hetcirc.perm.R |only R/lrcirc.perm.R |only R/makefolds.R | 13 ++++++++--- man/Directional-package.Rd | 5 +--- man/ESAG.da.Rd | 6 +++-- man/ESAGda.pred.Rd | 7 ++++-- man/colspml.mle.Rd | 6 ++--- man/dirda.cv.Rd | 2 + man/dirknn.Rd | 6 ++--- man/dirknn.tune.Rd | 5 ++-- man/etoa.Rd |only man/hcfcirc.perm.Rd |only man/spml.fbed.Rd | 50 ++++++++++++++++++++++----------------------- man/vmf.da.Rd | 6 +++-- man/vmfda.pred.Rd | 6 +++-- 20 files changed, 87 insertions(+), 64 deletions(-)
Title: Instrumental Variables
Description: Contains tools for instrumental variables estimation. Currently, non-parametric bounds, two-stage estimation and G-estimation are implemented. Balke, A. and Pearl, J. (1997) <doi:10.2307/2965583>, Vansteelandt S., Bowden J., Babanezhad M., Goetghebeur E. (2011) <doi:10.1214/11-STS360>.
Author: Arvid Sjolander, Elisabeth Dahlqwist, Torben Martinussen
Maintainer: Arvid Sjolander <arvid.sjolander@ki.se>
Diff between ivtools versions 2.2.0 dated 2019-03-12 and 2.3.0 dated 2020-02-24
DESCRIPTION | 8 - MD5 | 15 +-- R/sourcecode.R | 240 +++++++++++++++++++++++++++++++------------------------- inst |only man/VitD.Rd | 4 man/ivah.Rd | 3 man/ivbounds.Rd | 4 man/ivcoxph.Rd | 13 +-- man/ivglm.Rd | 5 - 9 files changed, 166 insertions(+), 126 deletions(-)
Title: Download 'Scrobbles' from 'Last.fm'
Description: 'Last.fm'<https://www.last.fm> is a music platform focussed on building a
detailed profile of a users listening habits. It does this by 'scrobbling' (recording)
every track you listen to on other platforms ('spotify', 'youtube', 'soundcloud' etc)
and transferring them to your 'Last.fm' database. This allows 'Last.fm' to act as a
complete record of your entire listening history. 'scrobbler' provides helper functions
to download and analyse your listening history in R.
Author: Conor Neilson
Maintainer: Conor Neilson <condwanaland@gmail.com>
Diff between scrobbler versions 0.2.12 dated 2019-10-20 and 0.2.15 dated 2020-02-24
scrobbler-0.2.12/scrobbler/R/check_args.R |only scrobbler-0.2.12/scrobbler/R/check_py_script.R |only scrobbler-0.2.12/scrobbler/R/py_ready_run_version.R |only scrobbler-0.2.12/scrobbler/R/py_validators.R |only scrobbler-0.2.12/scrobbler/R/read_scrobbles.R |only scrobbler-0.2.12/scrobbler/inst/extdata/scrobbles.txt |only scrobbler-0.2.12/scrobbler/man/convert.Rd |only scrobbler-0.2.12/scrobbler/man/read_scrobbles.Rd |only scrobbler-0.2.12/scrobbler/tests/testthat/test_arg_checkers.R |only scrobbler-0.2.12/scrobbler/tests/testthat/test_fetch_errors.R |only scrobbler-0.2.12/scrobbler/tests/testthat/test_file_creation.R |only scrobbler-0.2.12/scrobbler/tests/testthat/test_py_ready.R |only scrobbler-0.2.12/scrobbler/tests/testthat/test_py_version_to_run.R |only scrobbler-0.2.12/scrobbler/tests/testthat/test_read_and_convert.R |only scrobbler-0.2.12/scrobbler/tests/testthat/test_script_locators.R |only scrobbler-0.2.15/scrobbler/DESCRIPTION | 10 scrobbler-0.2.15/scrobbler/MD5 | 50 -- scrobbler-0.2.15/scrobbler/NAMESPACE | 3 scrobbler-0.2.15/scrobbler/NEWS.md |only scrobbler-0.2.15/scrobbler/R/api_helpers.R | 27 + scrobbler-0.2.15/scrobbler/R/fetch_tracks.R | 212 ++++++++++ scrobbler-0.2.15/scrobbler/R/get_pages_api.R | 55 ++ scrobbler-0.2.15/scrobbler/build/vignette.rds |binary scrobbler-0.2.15/scrobbler/inst/doc/changing-your-python-version.R | 8 scrobbler-0.2.15/scrobbler/inst/doc/changing-your-python-version.html | 38 + scrobbler-0.2.15/scrobbler/inst/doc/example-workflow.R | 10 scrobbler-0.2.15/scrobbler/inst/doc/example-workflow.html | 40 + scrobbler-0.2.15/scrobbler/man/check_py_script.Rd | 2 scrobbler-0.2.15/scrobbler/man/find_py_script.Rd | 2 scrobbler-0.2.15/scrobbler/man/install_scrobble_script.Rd | 5 scrobbler-0.2.15/scrobbler/man/py_path.Rd | 2 scrobbler-0.2.15/scrobbler/man/py_version.Rd | 2 scrobbler-0.2.15/scrobbler/man/update_scrobbles.Rd |only scrobbler-0.2.15/scrobbler/tests/testthat/test_timestamp_functions.R |only scrobbler-0.2.15/scrobbler/tests/testthat/test_url_constructor.R | 30 - 35 files changed, 410 insertions(+), 86 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-07-09 0.8-14
2017-12-11 0.8-13
2017-12-04 0.8-12
2017-11-13 0.8-11
2015-08-31 0.8-10
2015-08-10 0.8-9
2014-10-02 0.8-8
2014-08-26 0.8-7
2014-02-17 0.8-6
2013-07-18 0.8-5
2013-07-15 0.8-4
2013-06-14 0.8-3
2013-04-06 0.8-1
2012-10-14 0.8-0
2012-08-02 0.7-12
2012-07-21 0.7-11
2012-06-15 0.7-10
2012-05-07 0.7-9
2012-03-06 0.7-8
2012-02-17 0.7-7
2012-02-13 0.7-6
2012-01-29 0.7-5
2012-01-22 0.7-4
2012-01-16 0.7-3
2011-12-11 0.7-2
2011-11-21 0.7-1
2011-08-26 0.7-0
2011-07-04 0.6-6
2011-05-26 0.6-5
2011-05-11 0.6-4
2011-05-09 0.6-3
2011-04-24 0.6-2
2011-04-09 0.6-1
2011-04-06 0.6-0
2011-03-28 0.5-0
2011-03-21 0.4-0
2011-03-15 0.3-6
2011-03-13 0.3-5
2010-11-26 0.3-4
2010-11-15 0.3-3
2010-10-08 0.3-2
2010-10-02 0.3-1
2010-10-01 0.3-0
2010-09-30 0.2-4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-08-08 0.4-23
2017-08-07 0.4-22
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-10-18 0.99.17
2019-09-24 0.99.16
2019-08-30 0.99.15
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-02-26 9.1
2018-11-06 9.0
2016-12-30 8.3
2016-08-16 8.2
2016-07-27 8.1
2015-05-19 8.0
2014-11-29 7.1
2014-08-18 7.0
2014-03-06 6.1
2013-04-24 6.0
2013-01-06 5.2
2012-03-22 5.1
2012-01-03 5.0
2011-11-02 4.2
2011-05-24 4.1
2011-05-04 4.0
2011-04-06 3.0
2011-03-09 2.3
2011-01-20 2.2
2011-01-03 2.1
2010-12-14 2.0
2010-07-25 1.1
2010-07-09 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-01-25 0.3.0
2018-09-18 0.2.9
2018-08-30 0.2.8
2017-12-20 0.2.6
2017-11-17 0.2.5
2017-07-23 0.2.4
2017-07-22 0.2.3
2017-06-12 0.2.1
2017-06-09 0.2.0
2017-03-31 0.1.9
2017-03-29 0.1.8
2017-03-28 0.1.7
2017-03-26 0.1.6
2016-11-19 0.1.5
2016-09-08 0.1.4
2016-09-01 0.1.3
2016-08-23 0.1.2
2016-08-17 0.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-10-09 2.1.1
2018-06-07 2.1
2015-10-25 1.1.0
2014-07-31 1.0.1
2014-07-18 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-01-29 0.14
2017-07-27 0.13
2016-07-28 0.12-6
2015-04-13 0.12-5
2014-10-08 0.12-4
2013-07-09 0.12-3
2012-09-13 0.12-2
2012-07-13 0.12-1
2012-07-11 0.12-0
2011-12-22 0.11-3
2011-10-23 0.11-2
2011-07-27 0.11-1
2009-12-13 0.10-1
2009-01-05 0.9-9993
2007-02-16 0.9-9992
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-10-24 2.3-0
2016-02-23 2.2-6
2016-02-05 2.2-4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-02-05 2.3.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-08-31 2.4.4
2018-07-19 2.4.1
2018-04-03 2.3.3
2018-01-28 2.3.2
2018-01-27 2.3.0
2016-07-21 2.2.2
2016-07-06 2.2.1
2016-03-10 2.1.1
2015-02-09 2.0.16
2015-02-02 2.0.6
2014-06-11 1.1-20140610
2014-04-28 1.0-20140427
2013-10-25 1.0-20131025
2013-10-03 1.0-20131003
2013-09-24 0.0-20130917
Title: Automatically Search Errors or Warnings
Description: Provides environment hooks that obtain errors and warnings which
occur during the execution of code to automatically search for solutions.
Author: James Balamuta [aut, cre, cph]
(<https://orcid.org/0000-0003-2826-8458>)
Maintainer: James Balamuta <balamut2@illinois.edu>
Diff between errorist versions 0.0.3 dated 2020-02-06 and 0.1.0 dated 2020-02-24
DESCRIPTION | 6 +- MD5 | 20 ++++---- NEWS.md | 29 ++++++++++- R/handlers.R | 77 +++++++++++++++++++++++-------- R/zzz.R | 11 ++++ README.md | 2 build/vignette.rds |binary inst/doc/working-with-errorist.R | 13 +++++ inst/doc/working-with-errorist.Rmd | 59 ++++++++++++++++++++++- inst/doc/working-with-errorist.html | 89 +++++++++++++++++++++--------------- vignettes/working-with-errorist.Rmd | 59 ++++++++++++++++++++++- 11 files changed, 284 insertions(+), 81 deletions(-)
Title: Export Emissions to Atmospheric Models
Description: Emissions are the mass of pollutants released into the atmosphere. Air quality models need emissions data, with spatial and temporal distribution, to represent air pollutant concentrations. This package, eixport, creates inputs for the air quality models 'WRF-Chem' Grell et al (2005) <doi:10.1016/j.atmosenv.2005.04.027>, 'BRAMS-SPM' Freitas et al (2005) <doi:10.1016/j.atmosenv.2005.07.017> and 'RLINE' Snyder et al (2013) <doi:10.1016/j.atmosenv.2013.05.074>. See the eixport website (<https://atmoschem.github.io/eixport/>) for more information, documentations and examples. More details in Ibarra-Espinosa et al (2018) <doi.org/10.21105/joss.00607>.
Author: Sergio Ibarra-Espinosa [aut, cre]
(<https://orcid.org/0000-0002-3162-1905>),
Daniel Schuch [ctb] (<https://orcid.org/0000-0001-5977-4519>),
Edmilson Freitas [ctb] (<https://orcid.org/0000-0001-8783-2747>)
Maintainer: Sergio Ibarra-Espinosa <sergio.ibarra@usp.br>
Diff between eixport versions 0.4.0 dated 2019-11-22 and 0.4.4 dated 2020-02-24
DESCRIPTION | 10 +-- MD5 | 54 +++++++++--------- NAMESPACE | 12 ++-- NEWS.md | 19 ++++++ R/get_edgar.R | 12 ++-- R/st_explode.R |only R/wrf_add.R | 1 R/wrf_create.R | 16 ++++- R/wrf_get.R | 11 +++ R/wrf_grid.R | 119 +++++++++++++++++++++------------------- R/wrf_plot.R | 2 R/wrf_profile.R | 2 R/wrf_put.R | 47 ++++++++++----- man/eixport-package.Rd | 8 +- man/get_edgar.Rd | 14 +++- man/st_explode.Rd |only man/to_rline.Rd | 22 ++++++- man/to_wrf.Rd | 12 +++- man/wrf_add.Rd | 3 + man/wrf_create.Rd | 29 +++++++-- man/wrf_get.Rd | 11 ++- man/wrf_grid.Rd | 8 +- man/wrf_plot.Rd | 14 +++- man/wrf_profile.Rd | 3 + man/wrf_put.Rd | 14 ++-- tests/testthat/Rplots.pdf |binary tests/testthat/test-get_edgar.R | 2 tests/testthat/test-wrf_grid.R | 9 +-- tests/testthat/test-wrf_put.R | 1 29 files changed, 292 insertions(+), 163 deletions(-)
Title: Dimension Reduction for Outlier Detection
Description: A dimension reduction technique for outlier detection. DOBIN: a Distance
based Outlier BasIs using Neighbours, constructs a set of basis vectors for outlier
detection. This is not an outlier detection method; rather it is a pre-processing
method for outlier detection. It brings outliers to the fore-front using fewer basis
vectors (Kandanaarachchi, Hyndman 2019) <doi:10.13140/RG.2.2.15437.18403>.
Author: Sevvandi Kandanaarachchi [aut, cre]
(<https://orcid.org/0000-0002-0337-0395>)
Maintainer: Sevvandi Kandanaarachchi <sevvandik@gmail.com>
Diff between dobin versions 1.0.1 dated 2019-12-07 and 1.0.2 dated 2020-02-24
DESCRIPTION | 10 - MD5 | 10 - R/dobin.R | 89 ++++++------ R/y_space.R | 41 +---- inst/doc/dobin.html | 383 ++++++++++++++++++++++++++++++++++++++++------------ man/dobin.Rd | 4 6 files changed, 368 insertions(+), 169 deletions(-)
Title: Compare Baseline Characteristics Between Groups
Description: Compare baseline characteristics between two or more groups. The variables being compared can be factor and numeric variables. The function will automatically judge the type and distribution of the variables, and make statistical description and bivariate analysis.
Author: Zhongheng Zhang,
Sir Run Run Shaw hospital,
Zhejiang university school of medicine
Maintainer: Zhongheng Zhang <zh_zhang1984@zju.edu.cn>
Diff between CBCgrps versions 2.6 dated 2020-01-08 and 2.7 dated 2020-02-24
DESCRIPTION | 10 - MD5 | 6 - R/multigrps.R | 342 +++++++++++++++++++++++++++++----------------------------- R/twogrps.R | 186 ++++++++++++++++--------------- 4 files changed, 276 insertions(+), 268 deletions(-)