Tue, 07 Jul 2020

New package diceR with initial version 1.0.0
Type: Package
Package: diceR
Title: Diverse Cluster Ensemble in R
Version: 1.0.0
Authors@R: c(person(given = "Derek", family = "Chiu", role = c("aut", "cre"), email = "dchiu@bccrc.ca"), person(given = "Aline", family = "Talhouk", role = "aut", email = "atalhouk@bccrc.ca"), person(given = "Johnson", family = "Liu", role = c("ctb", "com"), email = "gliu@bccrc.ca"))
Description: Performs cluster analysis using an ensemble clustering framework, Chiu & Talhouk (2018) <doi:10.1186/s12859-017-1996-y>. Results from a diverse set of algorithms are pooled together using methods such as majority voting, K-Modes, LinkCluE, and CSPA. There are options to compare cluster assignments across algorithms using internal and external indices, visualizations such as heatmaps, and significance testing for the existence of clusters.
License: MIT + file LICENSE
URL: https://github.com/AlineTalhouk/diceR, https://alinetalhouk.github.io/diceR
BugReports: https://github.com/AlineTalhouk/diceR/issues
Depends: R (>= 3.5)
Imports: abind, assertthat, class, clue, clusterCrit, clValid, dplyr (>= 0.7.5), ggplot2, infotheo, klaR, magrittr, mclust, methods, NMF, purrr (>= 0.2.3), RankAggreg, Rcpp, stringr, tibble, tidyr, yardstick
Suggests: apcluster, blockcluster, cluster, covr, dbscan, e1071, kernlab, knitr, kohonen, pander, poLCA, progress, rmarkdown, Rtsne, sigclust, testthat
LinkingTo: Rcpp
VignetteBuilder: knitr
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
NeedsCompilation: yes
Packaged: 2020-07-07 18:03:55 UTC; Derek
Author: Derek Chiu [aut, cre], Aline Talhouk [aut], Johnson Liu [ctb, com]
Maintainer: Derek Chiu <dchiu@bccrc.ca>
Repository: CRAN
Date/Publication: 2020-07-07 22:30:02 UTC

More information about diceR at CRAN
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New package corHMM with initial version 2.1
Package: corHMM
Version: 2.1
Date: 2020-07-6
Title: Hidden Markov Models of Character Evolution
Authors@R: c(person("Jeremy", "Beaulieu", role=c("aut", "cre"), email = "jmbeauli@uark.edu"), person("Brian", "O'Meara", role=c("aut")), person("Jeffrey", "Oliver", role=c("aut")), person("James", "Boyko", role=c("aut")))
Maintainer: Jeremy Beaulieu <jmbeauli@uark.edu>
Depends: ape, nloptr, GenSA
Suggests: testthat, knitr, markdown
Imports: expm, numDeriv, corpcor, MASS, nnet, phangorn, parallel, viridis, Rmpfr, igraph, phytools
Description: Fits hidden Markov models of discrete character evolution which allow different transition rate classes on different portions of a phylogeny. Beaulieu et al (2013) <doi:10.1093/sysbio/syt034>.
License: GPL (>= 2)
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2020-07-07 16:20:44 UTC; jmbeauli
Author: Jeremy Beaulieu [aut, cre], Brian O'Meara [aut], Jeffrey Oliver [aut], James Boyko [aut]
Repository: CRAN
Date/Publication: 2020-07-07 22:30:06 UTC

More information about corHMM at CRAN
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Package varTestnlme updated to version 0.2.0 with previous version 0.1.0 dated 2020-01-10

Title: Variance Components Testing for Linear and Nonlinear Mixed Effects Models
Description: An implementation of the Likelihood ratio Test (LRT) for testing that, in a (non)linear mixed effects model, the variances of a subset of the random effects are equal to zero. There is no restriction on the subset of variances that can be tested: for example, it is possible to test that all the variances are equal to zero. Note that the implemented test is asymptotic. This package should be used on model fits from packages 'nlme', 'lmer', and 'saemix'. Charlotte Baey, Paul-Henry Cournède and Estelle Kuhn (2019) <doi:10.1016/j.csda.2019.01.014>.
Author: Charlotte Baey [aut, cre] (<https://orcid.org/0000-0002-1413-1058>), Estelle Kuhn [aut]
Maintainer: Charlotte Baey <charlotte.baey@univ-lille.fr>

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Package plotGMM updated to version 0.2.2 with previous version 0.2.1 dated 2019-06-28

Title: Tools for Visualizing Gaussian Mixture Models
Description: The main function, plot_GMM, is used for plotting output from Gaussian mixture models (GMMs), including both densities and overlaying mixture weight component curves from the fit GMM. The package also include the function, plot_cut_point, which plots the cutpoint (mu) from the GMM over a histogram of the distribution with several color options. Finally, the package includes the function, plot_mix_comps, which is used in the plot_GMM function, and can be used to create a custom plot for overlaying mixture component curves from GMMs. For the plot_mix_comps function, usage most often will be specifying the "fun" argument within "stat_function" in a ggplot2 object.
Author: Philip Waggoner [aut, cre], Fong Chan [aut]
Maintainer: Philip Waggoner <philip.waggoner@gmail.com>

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Package RcppSimdJson updated to version 0.1.0 with previous version 0.0.6 dated 2020-06-25

Title: 'Rcpp' Bindings for the 'simdjson' Header-Only Library for 'JSON' Parsing
Description: The 'JSON' format is ubiquitous for data interchange, and the 'simdjson' library written by Daniel Lemire (and many contributors) provides a high-performance parser for these files which by relying on parallel 'SIMD' instruction manages to parse these files as faster than disk speed. See the <arXiv:1902.08318> paper for more details about 'simdjson'. This package is at present still a fairly thin and not fully complete wrapper that does not aim to replace the existing and excellent 'JSON' packages for R.
Author: Dirk Eddelbuettel, Brendan Knapp
Maintainer: Dirk Eddelbuettel <edd@debian.org>

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Package thinkr updated to version 0.15 with previous version 0.13 dated 2018-06-21

Title: Tools for Cleaning Up Messy Files
Description: Some tools for cleaning up messy 'Excel' files to be suitable for R. People who have been working with 'Excel' for years built more or less complicated sheets with names, characters, formats that are not homogeneous. To be able to use them in R nowadays, we built a set of functions that will avoid the majority of importation problems and keep all the data at best.
Author: Vincent Guyader [aut, cre] (<https://orcid.org/0000-0003-0671-9270>), Sébastien Rochette [aut] (<https://orcid.org/0000-0002-1565-9313>), ThinkR [cph]
Maintainer: Vincent Guyader <vincent@thinkr.fr>

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Package skmeans updated to version 0.2-12 with previous version 0.2-11 dated 2017-08-08

Title: Spherical k-Means Clustering
Description: Algorithms to compute spherical k-means partitions. Features several methods, including a genetic and a fixed-point algorithm and an interface to the CLUTO vcluster program.
Author: Kurt Hornik [aut, cre] (<https://orcid.org/0000-0003-4198-9911>), Ingo Feinerer [aut], Martin Kober [aut]
Maintainer: Kurt Hornik <Kurt.Hornik@R-project.org>

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Package pkgcache updated to version 1.1.0 with previous version 1.0.7 dated 2020-04-18

Title: Cache 'CRAN'-Like Metadata and R Packages
Description: Metadata and package cache for CRAN-like repositories. This is a utility package to be used by package management tools that want to take advantage of caching.
Author: Gábor Csárdi [aut, cre]
Maintainer: Gábor Csárdi <csardi.gabor@gmail.com>

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Package discrim updated to version 0.1.0 with previous version 0.0.2 dated 2020-04-09

Title: Model Wrappers for Discriminant Analysis
Description: Bindings for additional classification models for use with the 'parsnip' package. Models include flavors of discriminant analysis, such as linear (Fisher (1936) <doi:10.1111/j.1469-1809.1936.tb02137.x>), regularized (Friedman (1989) <doi:10.1080/01621459.1989.10478752>), and flexible (Hastie, Tibshirani, and Buja (1994) <doi:10.1080/01621459.1994.10476866>), as well as naive Bayes classifiers (Hand and Yu (2007) <doi:10.1111/j.1751-5823.2001.tb00465.x>).
Author: Max Kuhn [aut, cre] (<https://orcid.org/0000-0003-2402-136X>), RStudio [cph]
Maintainer: Max Kuhn <max@rstudio.com>

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Package rcoreoa updated to version 0.4.0 with previous version 0.3.0 dated 2018-09-20

Title: Client for the CORE API
Description: Client for the CORE API (<https://core.ac.uk/docs/>). CORE (<https://core.ac.uk>) aggregates open access research outputs from repositories and journals worldwide and make them available to the public.
Author: Scott Chamberlain [aut, cre], Aristotelis Charalampous [ctb], Simon Goring [ctb]
Maintainer: Scott Chamberlain <myrmecocystus+r@gmail.com>

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Package PetfindeR updated to version 2.1.0 with previous version 2.0.0 dated 2019-08-23

Title: 'Petfinder' API Wrapper
Description: Wrapper of the 'Petfinder API' <https://www.petfinder.com/developers/v2/docs/> that implements methods for interacting with and extracting data from the 'Petfinder' database. The 'Petfinder REST API' allows access to the 'Petfinder' database, one of the largest online databases of adoptable animals and animal welfare organizations across North America.
Author: Aaron Schlegel
Maintainer: Aaron Schlegel <aaron@aaronschlegel.me>

Diff between PetfindeR versions 2.0.0 dated 2019-08-23 and 2.1.0 dated 2020-07-07

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Package fcaR updated to version 1.0.4 with previous version 1.0.3 dated 2020-01-19

Title: Formal Concept Analysis
Description: Provides tools to perform fuzzy formal concept analysis, presented in Wille (1982) <doi:10.1007/978-3-642-01815-2_23> and in Ganter and Obiedkov (2016) <doi:10.1007/978-3-662-49291-8>. It provides functions to load and save a formal context, extract its concept lattice and implications. In addition, one can use the implications to compute semantic closures of fuzzy sets and, thus, build recommendation systems.
Author: Domingo Lopez Rodriguez [aut, cre] (<https://orcid.org/0000-0002-0172-1585>), Angel Mora [aut], Jesus Dominguez [aut], Ana Villalon [aut], Ian Johnson [ctb]
Maintainer: Domingo Lopez Rodriguez <dominlopez@uma.es>

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Package TBRDist updated to version 1.0.1 with previous version 1.0.0 dated 2020-07-01

Title: Rearrangement Distances Between Unrooted Phylogenetic Trees
Description: Fast calculation of the Subtree Prune and Regraft (SPR), Tree Bisection and Reconnection (TBR) and Replug distances between unrooted trees, using the algorithms of Whidden and Matsen (2017) <arxiv:1511.07529>.
Author: Martin R. Smith [aut, cre, cph] (<https://orcid.org/0000-0001-5660-1727>), Chris Whidden [cph]
Maintainer: Martin R. Smith <martin.smith@durham.ac.uk>

Diff between TBRDist versions 1.0.0 dated 2020-07-01 and 1.0.1 dated 2020-07-07

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Package stratEst updated to version 1.0.1 with previous version 1.0.0 dated 2020-06-23

Title: Strategy Estimation
Description: Variants of strategy estimation (Dal Bo & Frechette, 2011, <doi:10.1257/aer.101.1.411>), including the model with parameters for the choice probabilities of the strategies (Breitmoser, 2015, <doi:10.1257/aer.20130675>), and the model with individual level covariates for the selection of strategies by individuals (Dvorak & Fehrler, 2018, <doi:10.2139/ssrn.2986445>).
Author: Fabian Dvorak
Maintainer: Fabian Dvorak <fabian.dvorak@uni.kn>

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Package grizbayr updated to version 1.2.3 with previous version 1.2.2 dated 2020-06-04

Title: Bayesian Inference for A|B and Bandit Marketing Tests
Description: Uses simple Bayesian conjugate prior update rules to calculate the win probability of each option, value remaining in the test, and percent lift over the baseline for various marketing objectives. References: Fink, Daniel (1997) "A Compendium of Conjugate Priors" <https://www.johndcook.com/CompendiumOfConjugatePriors.pdf>. Stucchio, Chris (2015) "Bayesian A/B Testing at VWO" <http://cdn2.hubspot.net/hubfs/310840/VWO_SmartStats_technical_whitepaper.pdf>.
Author: Ryan Angi
Maintainer: Ryan Angi <rangi@redventures.com>

Diff between grizbayr versions 1.2.2 dated 2020-06-04 and 1.2.3 dated 2020-07-07

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Package fbati updated to version 1.0-4 with previous version 1.0-3 dated 2018-04-23

Title: Gene by Environment Interaction and Conditional Gene Tests for Nuclear Families
Description: Does family-based gene by environment interaction tests, joint gene, gene-environment interaction test, and a test of a set of genes conditional on another set of genes.
Author: Thomas Hoffmann <tjhoffm@gmail.com>
Maintainer: Thomas Hoffmann <tjhoffm@gmail.com>

Diff between fbati versions 1.0-3 dated 2018-04-23 and 1.0-4 dated 2020-07-07

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New package ctsemOMX with initial version 1.0.2
Package: ctsemOMX
Type: Package
Title: Continuous Time SEM - 'OpenMx' Based Functions
Version: 1.0.2
Date: 2020-7-7
Authors@R: c(person("Charles", "Driver", role = c("aut","cre","cph"),email="driver@mpib-berlin.mpg.de"), person("Manuel", "Voelkle", role = c("aut","cph")), person("Han", "Oud", role = c("aut","cph") ))
Description: Original 'ctsem' (continuous time structural equation modelling) functionality, based on the 'OpenMx' software, as described in Driver, Oud, Voelkle (2017) <doi:10.18637/jss.v077.i05>, with updated details in vignette. Combines stochastic differential equations representing latent processes with structural equation measurement models. These functions were split off from the main package of 'ctsem', as the main package uses the 'rstan' package as a backend now -- offering estimation options from max likelihood to Bayesian. There are nevertheless use cases for the wide format SEM style approach as offered here, particularly when there are no individual differences in observation timing and the number of individuals is large. For the main 'ctsem' package, see <https://cran.r-project.org/package=ctsem>.
License: GPL-3
Depends: R (>= 3.5.0), ctsem (>= 3.3.2), OpenMx (>= 2.9.0)
URL: https://github.com/cdriveraus/ctsemOMX
Imports: graphics, grDevices, Matrix, methods, plyr, stats, utils
Encoding: UTF-8
LazyData: true
ByteCompile: true
Suggests: knitr, testthat
VignetteBuilder: knitr
RoxygenNote: 7.1.1
NeedsCompilation: no
Packaged: 2020-07-07 13:38:55 UTC; Driver
Author: Charles Driver [aut, cre, cph], Manuel Voelkle [aut, cph], Han Oud [aut, cph]
Maintainer: Charles Driver <driver@mpib-berlin.mpg.de>
Repository: CRAN
Date/Publication: 2020-07-07 15:40:02 UTC

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Package BIGL updated to version 1.5.1 with previous version 1.4.3 dated 2020-02-20

Title: Biochemically Intuitive Generalized Loewe Model
Description: Response surface methods for drug synergy analysis. Available methods include generalized and classical Loewe formulations as well as Highest Single Agent methodology. Response surfaces can be plotted in an interactive 3-D plot and formal statistical tests for presence of synergistic effects are available. Implemented methods and tests are described in the article "BIGL: Biochemically Intuitive Generalized Loewe null model for prediction of the expected combined effect compatible with partial agonism and antagonism" by Koen Van der Borght, Annelies Tourny, Rytis Bagdziunas, Olivier Thas, Maxim Nazarov, Heather Turner, Bie Verbist & Hugo Ceulemans (2017) <doi:10.1038/s41598-017-18068-5>.
Author: Heather Turner, Annelies Tourny, Olivier Thas, Maxim Nazarov, Rytis Bagdziunas
Maintainer: Maxim Nazarov <maxim.nazarov@openanalytics.eu>

Diff between BIGL versions 1.4.3 dated 2020-02-20 and 1.5.1 dated 2020-07-07

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Package TriadSim (with last version 0.1.1) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2017-05-24 0.1.1
2017-05-12 0.0.1

Permanent link
Package safedata updated to version 1.0.5 with previous version 1.0.1 dated 2020-06-02

Title: Interface to Data from the SAFE Project
Description: The SAFE Project (<https://www.safeproject.net/>) is a large scale ecological experiment in Malaysian Borneo that explores the impact of habitat fragmentation and conversion on ecosystem function and services. Data collected at the SAFE Project is made available under a common format through the Zenodo data repository and this package makes it easy to discover and load that data into R.
Author: Andy Aldersley [aut], David Orme [aut, cre] (<https://orcid.org/0000-0002-7005-1394>)
Maintainer: David Orme <d.orme@imperial.ac.uk>

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Package knitrdata updated to version 0.4.1 with previous version 0.3.1 dated 2020-06-23

Title: Data Language Engine for 'knitr' / 'rmarkdown'
Description: Implements a data language engine for incorporating data directly in 'rmarkdown' documents so that they can be made completely standalone.
Author: David M. Kaplan [aut, cre, cph] (<https://orcid.org/0000-0001-6087-359X>, dmkaplan2000)
Maintainer: David M. Kaplan <dmkaplan2000@gmail.com>

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Package hillR updated to version 0.5.0 with previous version 0.4.0 dated 2018-11-19

Title: Diversity Through Hill Numbers
Description: Calculate taxonomic, functional and phylogenetic diversity measures through Hill Numbers proposed by Chao, Chiu and Jost (2014) <doi:10.1146/annurev-ecolsys-120213-091540>.
Author: Daijiang Li
Maintainer: Daijiang Li <daijianglee@gmail.com>

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Package govdown updated to version 0.10.0 with previous version 0.9.1 dated 2020-05-13

Title: GOV.UK Style Templates for R Markdown
Description: A suite of custom R Markdown formats and templates for authoring web pages styled with the GOV.UK Design System.
Author: Crown Copyright 2019 [cph], Duncan Garmonsway [aut, cre]
Maintainer: Duncan Garmonsway <duncan.garmonsway@digital.cabinet-office.gov.uk>

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Package cmna updated to version 1.0.3 with previous version 1.0.2 dated 2019-07-23

Title: Computational Methods for Numerical Analysis
Description: Provides the source and examples for James P. Howard, II, "Computational Methods for Numerical Analysis with R," <https://jameshoward.us/cmna>, a book on numerical methods in R.
Author: James Howard [aut, cre] (<https://orcid.org/0000-0003-4530-1547>)
Maintainer: James Howard <jh@jameshoward.us>

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Permanent link

Package workflows updated to version 0.1.2 with previous version 0.1.1 dated 2020-03-17

Title: Modeling Workflows
Description: Managing both a 'parsnip' model and a preprocessor, such as a model formula or recipe from 'recipes', can often be challenging. The goal of 'workflows' is to streamline this process by bundling the model alongside the preprocessor, all within the same object.
Author: Davis Vaughan [aut, cre], RStudio [cph]
Maintainer: Davis Vaughan <davis@rstudio.com>

Diff between workflows versions 0.1.1 dated 2020-03-17 and 0.1.2 dated 2020-07-07

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More information about workflows at CRAN
Permanent link

Package plinkQC updated to version 0.3.2 with previous version 0.3.0 dated 2019-10-19

Title: Genotype Quality Control with 'PLINK'
Description: Genotyping arrays enable the direct measurement of an individuals genotype at thousands of markers. 'plinkQC' facilitates genotype quality control for genetic association studies as described by Anderson and colleagues (2010) <doi:10.1038/nprot.2010.116>. It makes 'PLINK' basic statistics (e.g. missing genotyping rates per individual, allele frequencies per genetic marker) and relationship functions accessible from 'R' and generates a per-individual and per-marker quality control report. Individuals and markers that fail the quality control can subsequently be removed to generate a new, clean dataset. Removal of individuals based on relationship status is optimised to retain as many individuals as possible in the study.
Author: Hannah Meyer [aut, cre] (<https://orcid.org/0000-0003-4564-0899>)
Maintainer: Hannah Meyer <hannah.v.meyer@gmail.com>

Diff between plinkQC versions 0.3.0 dated 2019-10-19 and 0.3.2 dated 2020-07-07

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More information about plinkQC at CRAN
Permanent link

New package epwshiftr with initial version 0.1.0
Package: epwshiftr
Title: Create Future 'EnergyPlus' Weather Files using 'CMIP6' Data
Version: 0.1.0
Authors@R: person(given = "Hongyuan", family = "Jia", role = c("aut", "cre"), email = "hongyuan.jia@bears-berkeley.sg", comment = c(ORCID = "0000-0002-0075-8183"))
Description: Query, download climate change projection data from the 'CMIP6' (Coupled Model Intercomparison Project Phase 6) project <https://pcmdi.llnl.gov/CMIP6> in the 'ESGF' (Earth System Grid Federation) platform <https://esgf.llnl.gov>, and create future 'EnergyPlus' <https://energyplus.net> Weather ('EPW') files adjusted from climate changes using data from Global Climate Models ('GCM').
Imports: checkmate, data.table (>= 1.12.4), eplusr, future.apply, fst, jsonlite, progressr, psychrolib, rappdirs, RNetCDF, units
Suggests: testthat, pingr, covr
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
URL: https://github.com/ideas-lab-nus/epwshiftr
BugReports: https://github.com/ideas-lab-nus/epwshiftr/issues
RoxygenNote: 7.0.2
Collate: 'coord.R' 'utils.R' 'epwshiftr-package.R' 'esgf.R' 'morph.R' 'netcdf.R'
NeedsCompilation: no
Packaged: 2020-07-07 13:38:42 UTC; hongyuanjia
Author: Hongyuan Jia [aut, cre] (<https://orcid.org/0000-0002-0075-8183>)
Maintainer: Hongyuan Jia <hongyuan.jia@bears-berkeley.sg>
Repository: CRAN
Date/Publication: 2020-07-07 14:00:07 UTC

More information about epwshiftr at CRAN
Permanent link

Package disk.frame updated to version 0.3.7 with previous version 0.3.6 dated 2020-06-13

Title: Larger-than-RAM Disk-Based Data Manipulation Framework
Description: A disk-based data manipulation tool for working with large-than-RAM datasets. Aims to lower the barrier-to-entry for manipulating large datasets by adhering closely to popular and familiar data manipulation paradigms like 'dplyr' verbs and 'data.table' syntax.
Author: Dai ZJ [aut, cre], Jacky Poon [ctb]
Maintainer: Dai ZJ <zhuojia.dai@gmail.com>

Diff between disk.frame versions 0.3.6 dated 2020-06-13 and 0.3.7 dated 2020-07-07

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More information about disk.frame at CRAN
Permanent link

Package tibble updated to version 3.0.2 with previous version 3.0.1 dated 2020-04-20

Title: Simple Data Frames
Description: Provides a 'tbl_df' class (the 'tibble') that provides stricter checking and better formatting than the traditional data frame.
Author: Kirill Müller [aut, cre], Hadley Wickham [aut], Romain Francois [ctb], Jennifer Bryan [ctb], RStudio [cph]
Maintainer: Kirill Müller <krlmlr+r@mailbox.org>

Diff between tibble versions 3.0.1 dated 2020-04-20 and 3.0.2 dated 2020-07-07

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More information about tibble at CRAN
Permanent link

New package parglm with initial version 0.1.5
Package: parglm
Type: Package
Title: Parallel GLM
Version: 0.1.5
Authors@R: c( person("Benjamin", "Christoffersen", email = "boennecd@gmail.com", role = c("cre", "aut")), person("Anthony", "Williams", role = c("cph")), person("Boost developers", role = c("cph")))
Description: Provides a parallel estimation method for generalized linear models without compiling with a multithreaded LAPACK or BLAS.
License: GPL-2
Encoding: UTF-8
LazyData: true
LinkingTo: Rcpp, RcppArmadillo
Imports: Rcpp, Matrix
SystemRequirements: C++11
Suggests: testthat, SuppDists, knitr, rmarkdown, speedglm, microbenchmark, R.rsp
RoxygenNote: 6.1.1
VignetteBuilder: R.rsp
NeedsCompilation: yes
Packaged: 2020-07-06 19:25:24 UTC; boennecd
Author: Benjamin Christoffersen [cre, aut], Anthony Williams [cph], Boost developers [cph]
Maintainer: Benjamin Christoffersen <boennecd@gmail.com>
Repository: CRAN
Date/Publication: 2020-07-07 12:50:02 UTC

More information about parglm at CRAN
Permanent link

Package loo updated to version 2.3.0 with previous version 2.2.0 dated 2019-12-19

Title: Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian Models
Description: Efficient approximate leave-one-out cross-validation (LOO) for Bayesian models fit using Markov chain Monte Carlo, as described in Vehtari, Gelman, and Gabry (2017) <doi:10.1007/s11222-016-9696-4>. The approximation uses Pareto smoothed importance sampling (PSIS), a new procedure for regularizing importance weights. As a byproduct of the calculations, we also obtain approximate standard errors for estimated predictive errors and for the comparison of predictive errors between models. The package also provides methods for using stacking and other model weighting techniques to average Bayesian predictive distributions.
Author: Aki Vehtari [aut], Jonah Gabry [cre, aut], Mans Magnusson [aut], Yuling Yao [aut], Paul-Christian Bürkner [aut], Topi Paananen [aut], Andrew Gelman [aut], Ben Goodrich [ctb], Juho Piironen [ctb]
Maintainer: Jonah Gabry <jsg2201@columbia.edu>

Diff between loo versions 2.2.0 dated 2019-12-19 and 2.3.0 dated 2020-07-07

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 loo-2.3.0/loo/NEWS.md                                                       |   18 
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Package logr updated to version 1.0.5 with previous version 1.0.4 dated 2020-07-05

Title: Creates Log Files
Description: Contains functions to help create log files. The package aims to overcome the difficulty of the base R sink() command. The log_print() function will print to both the console and the file log, without interfering in other write operations.
Author: David Bosak [aut, cre]
Maintainer: David Bosak <dbosak01@gmail.com>

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Package emdi updated to version 2.0.0 with previous version 1.1.7 dated 2020-03-18

Title: Estimating and Mapping Disaggregated Indicators
Description: Functions that support estimating, assessing and mapping regional disaggregated indicators. So far, estimation methods comprise direct estimation, the model-based unit-level approach Empirical Best Prediction (see "Small area estimation of poverty indicators" by Molina and Rao (2010) <doi:10.1002/cjs.10051>), the area-level model (see "Estimates of income for small places: An application of James-Stein procedures to Census Data" by (Fay and Herriot 1979) <doi:10.1080/01621459.1979.10482505>) and various extensions of it (adjusted variance estimation methods, log and arcsin transformation, spatial, robust and measurement error models), as well as their precision estimates. The assessment of the used model is supported by a summary and diagnostic plots. For a suitable presentation of estimates, map plots can be easily created. Furthermore, results can easily be exported to excel. For a detailed description of the package and the methods used see "The {R} Package {emdi} for Estimating and Mapping Regionally Disaggregated Indicators" by Kreutzmann et al. (2019) <doi:10.18637/jss.v091.i07>.
Author: Sylvia Harmening [aut], Ann-Kristin Kreutzmann [aut], Soeren Pannier [aut, cre], Natalia Rojas-Perilla [aut], Nicola Salvati [aut], Timo Schmid [aut], Matthias Templ [aut], Nikos Tzavidis [aut], Nora Würz [aut]
Maintainer: Soeren Pannier <soeren.pannier@fu-berlin.de>

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Package DNAtools updated to version 0.2-3 with previous version 0.2-2 dated 2020-03-03

Title: Tools for Analysing Forensic Genetic DNA Data
Description: Computationally efficient tools for comparing all pairs of profiles in a DNA database. The expectation and covariance of the summary statistic is implemented for fast computing. Routines for estimating proportions of close related individuals are available. The use of wildcards (also called F- designation) is implemented. Dedicated functions ease plotting the results. See Tvedebrink et al. (2012) <doi:10.1016/j.fsigen.2011.08.001>. Compute the distribution of the numbers of alleles in DNA mixtures. See Tvedebrink (2013) <doi:10.1016/j.fsigss.2013.10.142>.
Author: Torben Tvedebrink [aut], James Curran [aut], Mikkel Meyer Andersen [aut, cre]
Maintainer: Mikkel Meyer Andersen <mikl@math.aau.dk>

Diff between DNAtools versions 0.2-2 dated 2020-03-03 and 0.2-3 dated 2020-07-07

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New package climaemet with initial version 0.1.0
Package: climaemet
Title: Climate AEMET Tools
Version: 0.1.0
Author: Manuel Pizarro [aut, cre]
Maintainer: Manuel Pizarro <m.pizarro@csic.es>
Description: Tools to download the climatic data of the Spanish Meteorological Agency (AEMET) directly from R using their API <https://opendata.aemet.es/> and create scientific graphs (climate charts, trend analysis of climate time series, temperature and precipitation anomalies maps, warming stripes graphics, climatograms, etc.).
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Depends: R (>= 3.6.0)
Imports: dplyr (>= 1.0.0), tidyr (>= 1.1.0), lubridate (>= 1.7.9), stringr (>= 1.4.0), scales (>= 1.1.1), ggplot2 (>= 3.3.2), ggpubr (>= 0.4.0), ggthemes (>= 4.2.0), gtable (>= 0.3.0), gganimate (>= 1.0.5), RColorBrewer (>= 1.1.2), jpeg (>= 0.1.8.1), httr (>= 1.4.1), jsonlite (>= 1.7.0), climatol (>= 3.1.2), rlang (>= 0.4.6), magrittr (>= 1.5)
Collate: 'aemet_tools.R' 'climaemet-package.R' 'plot_tools.R' 'climaemet_main.R' 'climaemet_news.R' 'utils-pipe.R'
Suggests: knitr, rmarkdown, learnr
NeedsCompilation: no
Repository: CRAN
URL: https://github.com/mpizarrotig/climaemet
BugReports: https://github.com/mpizarrotig/climaemet/issues
Packaged: 2020-07-07 12:03:06 UTC; BIODIVERSITYLAB
Date/Publication: 2020-07-07 12:50:16 UTC

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Package ariExtra updated to version 0.2.9 with previous version 0.2.7 dated 2020-07-03

Title: Tools for Creating Automated Courses
Description: Leverages the 'ari' package and other tools to create automated courses from slides and a script. Also, uploads these to 'YouTube' and other services using 'tuber' package.
Author: John Muschelli [aut, cre] (<https://orcid.org/0000-0001-6469-1750>)
Maintainer: John Muschelli <muschellij2@gmail.com>

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Package lcmm updated to version 1.9.2 with previous version 1.9.1 dated 2020-06-03

Title: Extended Mixed Models Using Latent Classes and Latent Processes
Description: Estimation of various extensions of the mixed models including latent class mixed models, joint latent latent class mixed models and mixed models for curvilinear univariate or multivariate longitudinal outcomes using a maximum likelihood estimation method (Proust-Lima, Philipps, Liquet (2017) <doi:10.18637/jss.v078.i02>).
Author: Cecile Proust-Lima, Viviane Philipps, Amadou Diakite and Benoit Liquet
Maintainer: Cecile Proust-Lima <cecile.proust-lima@inserm.fr>

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New package EFAtools with initial version 0.1.0
Package: EFAtools
Title: Fast and Flexible Implementations of Exploratory Factor Analysis Tools
Version: 0.1.0
Authors@R: c(person(given = "Markus", family = "Steiner", role = c("aut", "cre"), email = "markus.d.steiner@gmail.com"), person(given = "Silvia", family = "Grieder", role = "aut", email = "silvia.grieder@gmail.com"), person(given = "William", family = "Revelle", role = "ctb"), person(given = "Max", family = "Auerswald", role = "ctb"), person(given = "Morten", family = "Moshagen", role = "ctb"), person(given = "John", family = "Ruscio", role = "ctb"), person(given = "Brendan", family = "Roche", role = "ctb"), person(given = "Urbano", family = "Lorenzo-Seva", role = "ctb"), person(given = "David", family = "Navarro-Gonzalez", role = "ctb"))
Description: Provides functions to perform exploratory factor analysis (EFA) procedures and compare their solutions. The goal is to provide state-of-the-art factor retention methods and a high degree of flexibility in the EFA procedures. This way, for example, implementations from R 'psych' and 'SPSS' can be compared. Moreover, functions for Schmid-Leiman transformation and the computation of omegas are provided. To speed up the analyses, some of the iterative procedures, like principal axis factoring (PAF), are implemented in C++.
Depends: R (>= 3.6.0)
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
Imports: lavaan, psych, crayon, stringr, stats, ggplot2, plotly, tibble, magrittr, dplyr, cli, Rcpp, viridisLite, graphics, parallel, future.apply, future, GPArotation, checkmate, microbenchmark
LinkingTo: Rcpp, RcppArmadillo
Suggests: testthat, knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2020-07-07 09:59:28 UTC; msteiner
Author: Markus Steiner [aut, cre], Silvia Grieder [aut], William Revelle [ctb], Max Auerswald [ctb], Morten Moshagen [ctb], John Ruscio [ctb], Brendan Roche [ctb], Urbano Lorenzo-Seva [ctb], David Navarro-Gonzalez [ctb]
Maintainer: Markus Steiner <markus.d.steiner@gmail.com>
Repository: CRAN
Date/Publication: 2020-07-07 11:10:02 UTC

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Package TreeSearch updated to version 0.4.2 with previous version 0.4.1 dated 2020-06-09

Title: Phylogenetic Tree Search Using Custom Optimality Criteria
Description: Searches for phylogenetic trees that are optimal using a user-defined criterion. Handles inapplicable data using the algorithm of Brazeau, Guillerme and Smith (2019) <doi:10.1093/sysbio/syy083>. Implements Profile Parsimony (Faith and Trueman, 2001) <doi:10.1080/10635150118627>, and Successive Approximations (Farris, 1969) <doi:10.2307/2412182>.
Author: Martin R. Smith [aut, cre, cph] (<https://orcid.org/0000-0001-5660-1727>), Martin Brazeau [cph] (<https://orcid.org/0000-0002-0650-1282>)
Maintainer: Martin R. Smith <martin.smith@durham.ac.uk>

Diff between TreeSearch versions 0.4.1 dated 2020-06-09 and 0.4.2 dated 2020-07-07

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Package WeightIt updated to version 0.10.0 with previous version 0.9.0 dated 2020-02-11

Title: Weighting for Covariate Balance in Observational Studies
Description: Generates weights to form equivalent groups in observational studies with point or longitudinal treatments by easing and extending the functionality of the R packages 'twang' for generalized boosted modeling (McCaffrey, Ridgeway & Morral, 2004) <doi:10.1037/1082-989X.9.4.403>, 'CBPS' for covariate balancing propensity score weighting (Imai & Ratkovic, 2014) <doi:10.1111/rssb.12027>, 'ebal' for entropy balancing (Hainmueller, 2012) <doi:10.1093/pan/mpr025>, 'optweight' for optimization-based weights (Zubizarreta, 2015) <doi:10.1080/01621459.2015.1023805>, 'ATE' for empirical balancing calibration weighting (Chan, Yam, & Zhang, 2016) <doi:10.1111/rssb.12129>, and 'SuperLearner' for stacked machine learning-based propensity scores (Pirracchio, Petersen, & van der Laan, 2015) <doi:10.1093/aje/kwu253>. Also allows for assessment of weights and checking of covariate balance by interfacing directly with 'cobalt'.
Author: Noah Greifer [aut, cre] (<https://orcid.org/0000-0003-3067-7154>)
Maintainer: Noah Greifer <noah.greifer@gmail.com>

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Package TreeTools updated to version 1.1.0 with previous version 1.0.0 dated 2020-06-08

Title: Create, Modify and Analyse Phylogenetic Trees
Description: Efficient implementations of functions for the creation, modification and analysis of phylogenetic trees. Applications include: generation of trees with specified shapes; rooting of trees and extraction of subtrees; calculation and depiction of node support; calculation of ancestor-descendant relationships; import and export of trees from Newick, Nexus (Maddison et al. 1997) <doi:10.1093/sysbio/46.4.590>, and TNT <http://www.lillo.org.ar/phylogeny/tnt/> formats; and analysis of splits and cladistic information.
Author: Martin R. Smith [aut, cre, cph] (<https://orcid.org/0000-0001-5660-1727>), Emmanuel Paradis [cph] (<https://orcid.org/0000-0003-3092-2199>), Klaus Schliep [cph] (<https://orcid.org/0000-0003-2941-0161>)
Maintainer: Martin R. Smith <martin.smith@durham.ac.uk>

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 tests/testthat/test-tree_generation.R        |    2 
 tests/testthat/test-tree_properties.R        |    6 
 tests/testthat/test-tree_rearrange.R         |   54 ++++
 vignettes/load-trees.Rmd                     |    2 
 52 files changed, 847 insertions(+), 322 deletions(-)

More information about TreeTools at CRAN
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Package solitude updated to version 1.0.1 with previous version 1.0.0 dated 2020-07-05

Title: An Implementation of Isolation Forest
Description: Isolation forest is anomaly detection method introduced by the paper Isolation based Anomaly Detection (Liu, Ting and Zhou <doi:10.1145/2133360.2133363>).
Author: Komala Sheshachala Srikanth [aut, cre]
Maintainer: Komala Sheshachala Srikanth <sri.teach@gmail.com>

Diff between solitude versions 1.0.0 dated 2020-07-05 and 1.0.1 dated 2020-07-07

 DESCRIPTION            |   10 +-
 MD5                    |   10 +-
 NEWS.md                |   13 ++-
 R/isolationForest_r6.R |  157 +++++++++++++++++++++++++------------------
 README.md              |  176 +++++++++++++++++++++++++------------------------
 man/isolationForest.Rd |   46 ++++++------
 6 files changed, 221 insertions(+), 191 deletions(-)

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New package SiteAdapt with initial version 1.0.0
Package: SiteAdapt
Type: Package
Title: Site Adaptation of Solar Irradiance Modeled Series
Version: 1.0.0
Author: Carlos M. Fernandez-Peruchena
Maintainer: Carlos M. Fernandez-Peruchena <cfernandez@cener.com>
Description: The SiteAdapt procedure improves the accuracy of modeled solar irradiance series through site-adaptation with coincident ground-based measurements relying on the use of a regression preprocessing followed by an empirical quantile mapping (eQM) correction. Fernandez-Peruchena et al (2020) <doi:10.3390/rs12132127>.
Imports: glmulti, solaR, hyfo, hydroGOF, RColorBrewer, ggplot2, ggpubr, stats
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.2
Suggests: testthat
NeedsCompilation: no
Packaged: 2020-07-07 08:20:41 UTC; cfernandez
Depends: R (>= 3.5.0)
Repository: CRAN
Date/Publication: 2020-07-07 09:40:07 UTC

More information about SiteAdapt at CRAN
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New package pubh with initial version 1.1.16
Package: pubh
Title: A Toolbox for Public Health and Epidemiology
Version: 1.1.16
Authors@R: c( person("Josie", "Athens", email = "josie.athens@otago.ac.nz", role = c("aut", "cre")), person("Frank", "Harell", email = "f.harrell@vanderbilt.edu", role = "ctb"), person("John", "Fox", email = "jfox@mcmaster.ca", role = "ctb"), person("R-Core", role="ctb"))
Maintainer: Josie Athens <josie.athens@otago.ac.nz>
Description: A toolbox for making R functions and capabilities more accessible to students and professionals from Epidemiology and Public Health related disciplines. Includes a function to report coefficients and confidence intervals from models using robust standard errors (when available), functions that expand 'ggplot2' plots and functions relevant for introductory papers in Epidemiology or Public Health. Please note that use of the provided data sets is for educational purposes only.
Depends: R (>= 4.0.0), emmeans, ggformula, magrittr, stats
Imports: car, dplyr, Epi, epiR, epitools, ggplot2, Hmisc, huxtable, lmtest, moonBook, sandwich, sjlabelled, sjmisc, sjPlot, survival, tibble, tidyselect
Suggests: broom, bookdown, GGally, ggeffects, ggfortify, ggpubr, ggsci, haven, ISwR, jtools, knitr, latex2exp, lme4, MASS, mosaic, nlme, nnet, ordinal, psych, reshape2, rmarkdown, rms, scales, tidyverse
License: GPL-2
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
VignetteBuilder: knitr
URL: https://github.com/josie-athens/pubh
BugReports: https://github.com/josie-athens/pubh/issues
NeedsCompilation: no
Packaged: 2020-07-06 22:06:45 UTC; josie
Author: Josie Athens [aut, cre], Frank Harell [ctb], John Fox [ctb], R-Core [ctb]
Repository: CRAN
Date/Publication: 2020-07-07 09:10:02 UTC

More information about pubh at CRAN
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Package paradox updated to version 0.3.0 with previous version 0.2.0 dated 2020-04-15

Title: Define and Work with Parameter Spaces for Complex Algorithms
Description: Define parameter spaces, constraints and dependencies for arbitrary algorithms, to program on such spaces. Also includes statistical designs and random samplers. Objects are implemented as 'R6' classes.
Author: Michel Lang [cre, aut] (<https://orcid.org/0000-0001-9754-0393>), Bernd Bischl [aut] (<https://orcid.org/0000-0001-6002-6980>), Jakob Richter [aut] (<https://orcid.org/0000-0003-4481-5554>), Xudong Sun [aut] (<https://orcid.org/0000-0003-3269-2307>), Martin Binder [aut], Marc Becker [ctb] (<https://orcid.org/0000-0002-8115-0400>)
Maintainer: Michel Lang <michellang@gmail.com>

Diff between paradox versions 0.2.0 dated 2020-04-15 and 0.3.0 dated 2020-07-07

 DESCRIPTION                    |   20 +
 MD5                            |   98 +++----
 NEWS.md                        |    7 
 R/Condition.R                  |   51 ++-
 R/Design.R                     |   63 ++--
 R/Param.R                      |  138 ++++++----
 R/ParamDbl.R                   |   47 +--
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 R/ParamInt.R                   |   44 +--
 R/ParamLgl.R                   |   42 ---
 R/ParamSet.R                   |  296 ++++++++++++++---------
 R/ParamSetCollection.R         |   42 +--
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 R/Sampler.R                    |   47 +--
 R/Sampler1D.R                  |  157 +++---------
 R/SamplerHierarchical.R        |   29 --
 R/SamplerJointIndep.R          |   27 --
 R/SamplerUnif.R                |   14 -
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 R/generate_design_grid.R       |    6 
 R/generate_design_lhs.R        |    6 
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 R/helper.R                     |only
 README.md                      |    8 
 man/Condition.Rd               |  140 +++++++++-
 man/Design.Rd                  |  117 +++++++--
 man/Param.Rd                   |  308 +++++++++++++++++++----
 man/ParamDbl.Rd                |  169 ++++++++++---
 man/ParamFct.Rd                |  162 +++++++++---
 man/ParamInt.Rd                |  168 ++++++++++---
 man/ParamLgl.Rd                |  150 ++++++++---
 man/ParamSet.Rd                |  527 +++++++++++++++++++++++++++++++++--------
 man/ParamSetCollection.Rd      |  138 +++++++++-
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 man/Sampler1DCateg.Rd          |   95 +++++--
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 man/Sampler1DUnif.Rd           |   77 ++++-
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 man/SamplerJointIndep.Rd       |   90 ++++---
 man/SamplerUnif.Rd             |   74 ++++-
 man/assert_param.Rd            |    2 
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 man/generate_design_lhs.Rd     |    6 
 man/generate_design_random.Rd  |    4 
 man/paradox-package.Rd         |    5 
 man/transpose.Rd               |only
 tests/testthat/test_ParamSet.R |   31 ++
 tests/testthat/test_sampler.R  |    6 
 51 files changed, 2924 insertions(+), 1296 deletions(-)

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New package predReliability with initial version 0.1.0
Package: predReliability
Title: Estimates Reliability of Individual Supervised Learning Predictions
Version: 0.1.0
Authors@R: person("Simon", "Cof", email = "simon.cof@windowslive.com", role = c("aut", "cre"))
Description: An implementation of reliability estimation methods described in the paper (Bosnic, Z., & Kononenko, I. (2008) <doi:10.1007/s10489-007-0084-9>), which allows you to test the reliability of a single predicted instance made by your model and prediction function. It also allows you to make a correlation test to estimate which reliability estimate is the most accurate for your model.
Depends: R (>= 3.3.2)
Imports: parallel, cluster, rpart
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
NeedsCompilation: no
Packaged: 2020-07-07 01:10:05 UTC; Uporabnik
Author: Simon Cof [aut, cre]
Maintainer: Simon Cof <simon.cof@windowslive.com>
Repository: CRAN
Date/Publication: 2020-07-07 09:20:05 UTC

More information about predReliability at CRAN
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New package oRus with initial version 1.0.0
Package: oRus
Title: Operational Research User Stories
Version: 1.0.0
Authors@R: c(person("Melina", "Vidoni", email = "melina.vidoni@rmit.edu.au", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-4099-1430")), person("Laura", "Cunico", email = "laura-cunico@santafe-conicet.gov.ar", role = "aut"))
Maintainer: Melina Vidoni <melina.vidoni@rmit.edu.au>
Description: A first implementation of automated parsing of user stories, when used to defined functional requirements for operational research mathematical models. It allows reading user stories, splitting them on the who-what-why template, and classifying them according to the parts of the mathematical model that they represent. Also provides semantic grouping of stories, for project management purposes.
License: GPL-3
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.6.0)
Imports: dplyr, stringr, tm, tibble, tidytext, topicmodels, rmarkdown, xlsx, knitr
RoxygenNote: 7.1.0
URL: https://github.com/melvidoni/oRus
BugReports: https://github.com/melvidoni/oRus/issues
VignetteBuilder: knitr
Suggests: reshape2, qpdf
NeedsCompilation: no
Packaged: 2020-07-06 21:45:25 UTC; rstudio-user
Author: Melina Vidoni [aut, cre] (<https://orcid.org/0000-0002-4099-1430>), Laura Cunico [aut]
Repository: CRAN
Date/Publication: 2020-07-07 09:20:08 UTC

More information about oRus at CRAN
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Package netClust updated to version 1.0.1 with previous version 1.0 dated 2020-07-06

Title: Model-Based Clustering of Network Data
Description: Clustering unilayer and multilayer network data by means of finite mixtures is the main utility of 'netClust'.
Author: Shuchismita Sarkar [aut, cre], Volodymyr Melnykov [aut]
Maintainer: Shuchismita Sarkar <ssarkar@bgsu.edu>

Diff between netClust versions 1.0 dated 2020-07-06 and 1.0.1 dated 2020-07-07

 DESCRIPTION       |    6 +++---
 MD5               |    6 +++---
 build/partial.rdb |binary
 src/netClust.cpp  |   38 ++++++++++++++++++++++++--------------
 4 files changed, 30 insertions(+), 20 deletions(-)

More information about netClust at CRAN
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New package DetLifeInsurance with initial version 0.1.2
Package: DetLifeInsurance
Type: Package
Title: Life Insurance Premium and Reserves Valuation
Version: 0.1.2
Authors@R: c( person("Joaquin", "Auza", email = "auzajoaquin@gmail.com", role = c("aut", "cre")), person("Maria Sol", "Alvarez", email = "alvarezmmsol@gmail.com", role = "aut"))
Maintainer: Joaquin Auza <auzajoaquin@gmail.com>
Description: Methods for valuation of life insurance premiums and reserves (including variable-benefit and fractional coverage) based on "Actuarial Mathematics" by Bowers, H.U. Gerber, J.C. Hickman, D.A. Jones and C.J. Nesbitt (1997, ISBN: 978-0938959465), "Actuarial Mathematics for Life Contingent Risks" by Dickson, David C. M., Hardy, Mary R. and Waters, Howard R (2009) <doi:10.1017/CBO9780511800146> and "Life Contingencies" by Jordan, C. W (1952) <doi:10.1017/S002026810005410X>. It also contains functions for equivalent interest and discount rate calculation, present and future values of annuities, and loan amortization schedule.
License: GPL-3
Depends: R (>= 3.5.0)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
URL: https://github.com/JoaquinAuza/DetLifeInsurance
BugReports: https://github.com/JoaquinAuza/DetLifeInsurance/issues
VignetteBuilder: knitr
Suggests: knitr, rmarkdown
NeedsCompilation: no
Packaged: 2020-07-07 07:17:04 UTC; citio
Author: Joaquin Auza [aut, cre], Maria Sol Alvarez [aut]
Repository: CRAN
Date/Publication: 2020-07-07 09:40:10 UTC

More information about DetLifeInsurance at CRAN
Permanent link

Package AsioHeaders updated to version 1.16.1-1 with previous version 1.12.2-1 dated 2020-03-11

Title: 'Asio' C++ Header Files
Description: 'Asio' is a cross-platform C++ library for network and low-level I/O programming that provides developers with a consistent asynchronous model using a modern C++ approach. It is also included in Boost but requires linking when used with Boost. Standalone it can be used header-only (provided a recent compiler). 'Asio' is written and maintained by Christopher M. Kohlhoff, and released under the 'Boost Software License', Version 1.0.
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel <edd@debian.org>

Diff between AsioHeaders versions 1.12.2-1 dated 2020-03-11 and 1.16.1-1 dated 2020-07-07

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 AsioHeaders-1.16.1-1/AsioHeaders/ChangeLog                                                      |   20 
 AsioHeaders-1.16.1-1/AsioHeaders/DESCRIPTION                                                    |    8 
 AsioHeaders-1.16.1-1/AsioHeaders/MD5                                                            |  969 ++--
 AsioHeaders-1.16.1-1/AsioHeaders/NAMESPACE                                                      |    6 
 AsioHeaders-1.16.1-1/AsioHeaders/README.md                                                      |    8 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/NEWS.Rd                                                   |    7 
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 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/basic_datagram_socket.hpp                    |  690 +--
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/basic_deadline_timer.hpp                     |  295 -
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/basic_io_object.hpp                          |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/basic_raw_socket.hpp                         |  692 +--
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 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/basic_signal_set.hpp                         |  309 +
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/basic_socket.hpp                             |  591 +-
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/basic_socket_acceptor.hpp                    | 1437 ++++--
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/basic_socket_iostream.hpp                    |   65 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/basic_socket_streambuf.hpp                   |   50 
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 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/dev_poll_reactor.hpp             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/dev_poll_reactor.ipp             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/epoll_reactor.hpp                |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/epoll_reactor.ipp                |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/eventfd_select_interrupter.ipp   |   20 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/handler_tracking.ipp             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/kqueue_reactor.hpp               |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/kqueue_reactor.ipp               |    8 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/null_event.ipp                   |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/pipe_select_interrupter.ipp      |   17 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/posix_event.ipp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/posix_mutex.ipp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/posix_thread.ipp                 |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/posix_tss_ptr.ipp                |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/reactive_descriptor_service.ipp  |    9 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/reactive_serial_port_service.ipp |    8 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/reactive_socket_service_base.ipp |    8 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/resolver_service_base.ipp        |   70 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/scheduler.ipp                    |   54 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/select_reactor.hpp               |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/select_reactor.ipp               |   11 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/service_registry.hpp             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/service_registry.ipp             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/signal_set_service.ipp           |   42 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/socket_ops.ipp                   |   22 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/socket_select_interrupter.ipp    |   21 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/strand_executor_service.hpp      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/strand_executor_service.ipp      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/strand_service.hpp               |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/strand_service.ipp               |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/throw_error.ipp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/timer_queue_ptime.ipp            |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/timer_queue_set.ipp              |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/win_event.ipp                    |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/win_iocp_handle_service.ipp      |   12 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/win_iocp_io_context.hpp          |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/win_iocp_io_context.ipp          |   44 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/win_iocp_serial_port_service.ipp |   23 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/win_iocp_socket_service_base.ipp |   14 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/win_mutex.ipp                    |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/win_object_handle_service.ipp    |   35 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/win_static_mutex.ipp             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/win_thread.ipp                   |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/win_tss_ptr.ipp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/winrt_ssocket_service_base.ipp   |   39 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/winrt_timer_scheduler.hpp        |    8 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/winrt_timer_scheduler.ipp        |   15 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/impl/winsock_init.ipp                 |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/io_control.hpp                        |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/io_object_executor.hpp                |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/io_object_impl.hpp                    |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/is_buffer_sequence.hpp                |   81 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/is_executor.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/keyword_tss_ptr.hpp                   |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/kqueue_reactor.hpp                    |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/local_free_on_block_exit.hpp          |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/macos_fenced_block.hpp                |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/memory.hpp                            |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/mutex.hpp                             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/non_const_lvalue.hpp                  |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/noncopyable.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/null_event.hpp                        |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/null_fenced_block.hpp                 |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/null_global.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/null_mutex.hpp                        |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/null_reactor.hpp                      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/null_signal_blocker.hpp               |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/null_socket_service.hpp               |  115 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/null_static_mutex.hpp                 |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/null_thread.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/null_tss_ptr.hpp                      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/object_pool.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/old_win_sdk_compat.hpp                |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/op_queue.hpp                          |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/operation.hpp                         |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/pipe_select_interrupter.hpp           |    4 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/pop_options.hpp                       |   20 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/posix_event.hpp                       |    4 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/posix_fd_set_adapter.hpp              |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/posix_global.hpp                      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/posix_mutex.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/posix_signal_blocker.hpp              |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/posix_static_mutex.hpp                |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/posix_thread.hpp                      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/posix_tss_ptr.hpp                     |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/push_options.hpp                      |   20 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactive_descriptor_service.hpp       |   55 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactive_null_buffers_op.hpp          |   14 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactive_serial_port_service.hpp      |   24 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactive_socket_accept_op.hpp         |   51 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactive_socket_connect_op.hpp        |   15 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactive_socket_recv_op.hpp           |   18 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactive_socket_recvfrom_op.hpp       |   16 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactive_socket_recvmsg_op.hpp        |   15 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactive_socket_send_op.hpp           |   18 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactive_socket_sendto_op.hpp         |   16 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactive_socket_service.hpp           |  117 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactive_socket_service_base.hpp      |   85 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactive_wait_op.hpp                  |   14 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactor.hpp                           |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactor_fwd.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactor_op.hpp                        |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/reactor_op_queue.hpp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/recycling_allocator.hpp               |   30 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/regex_fwd.hpp                         |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/resolve_endpoint_op.hpp               |   38 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/resolve_op.hpp                        |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/resolve_query_op.hpp                  |   34 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/resolver_service.hpp                  |   36 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/resolver_service_base.hpp             |   41 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/scheduler.hpp                         |   15 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/scheduler_operation.hpp               |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/scheduler_thread_info.hpp             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/scoped_lock.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/scoped_ptr.hpp                        |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/select_interrupter.hpp                |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/select_reactor.hpp                    |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/service_registry.hpp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/signal_blocker.hpp                    |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/signal_handler.hpp                    |   14 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/signal_init.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/signal_op.hpp                         |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/signal_set_service.hpp                |   36 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/socket_holder.hpp                     |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/socket_ops.hpp                        |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/socket_option.hpp                     |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/socket_select_interrupter.hpp         |    4 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/socket_types.hpp                      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/solaris_fenced_block.hpp              |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/static_mutex.hpp                      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/std_event.hpp                         |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/std_fenced_block.hpp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/std_global.hpp                        |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/std_mutex.hpp                         |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/std_static_mutex.hpp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/std_thread.hpp                        |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/strand_executor_service.hpp           |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/strand_service.hpp                    |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/string_view.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/thread.hpp                            |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/thread_context.hpp                    |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/thread_group.hpp                      |    8 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/thread_info_base.hpp                  |   14 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/throw_error.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/throw_exception.hpp                   |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/timer_queue.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/timer_queue_base.hpp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/timer_queue_ptime.hpp                 |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/timer_queue_set.hpp                   |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/timer_scheduler.hpp                   |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/timer_scheduler_fwd.hpp               |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/tss_ptr.hpp                           |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/type_traits.hpp                       |    9 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/variadic_templates.hpp                |   34 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/wait_handler.hpp                      |   16 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/wait_op.hpp                           |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_event.hpp                         |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_fd_set_adapter.hpp                |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_fenced_block.hpp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_global.hpp                        |   13 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_handle_read_op.hpp           |   16 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_handle_service.hpp           |   72 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_handle_write_op.hpp          |   15 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_io_context.hpp               |   14 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_null_buffers_op.hpp          |   14 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_operation.hpp                |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_overlapped_op.hpp            |   14 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_overlapped_ptr.hpp           |   42 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_serial_port_service.hpp      |   24 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_accept_op.hpp         |   43 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_connect_op.hpp        |   15 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_recv_op.hpp           |   15 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_recvfrom_op.hpp       |   16 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_recvmsg_op.hpp        |   15 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_send_op.hpp           |   15 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_service.hpp           |  134 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_service_base.hpp      |  103 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_thread_info.hpp              |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_iocp_wait_op.hpp                  |   14 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_mutex.hpp                         |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_object_handle_service.hpp         |   35 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_static_mutex.hpp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_thread.hpp                        |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/win_tss_ptr.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/winapp_thread.hpp                     |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/wince_thread.hpp                      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/winrt_async_manager.hpp               |   39 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/winrt_async_op.hpp                    |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/winrt_resolve_op.hpp                  |   15 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/winrt_resolver_service.hpp            |   54 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/winrt_socket_connect_op.hpp           |   14 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/winrt_socket_recv_op.hpp              |   15 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/winrt_socket_send_op.hpp              |   15 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/winrt_ssocket_service.hpp             |   33 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/winrt_ssocket_service_base.hpp        |   69 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/winrt_timer_scheduler.hpp             |   26 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/winrt_utils.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/winsock_init.hpp                      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/work_dispatcher.hpp                   |    7 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/detail/wrapped_handler.hpp                   |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/dispatch.hpp                                 |   36 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/error.hpp                                    |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/error_code.hpp                               |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/execution_context.hpp                        |    5 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/executor.hpp                                 |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/executor_work_guard.hpp                      |    6 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/generic/basic_endpoint.hpp                   |    4 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/generic/datagram_protocol.hpp                |    8 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/generic/detail/endpoint.hpp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/generic/detail/impl/endpoint.ipp             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/generic/raw_protocol.hpp                     |    8 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/generic/seq_packet_protocol.hpp              |    8 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/generic/stream_protocol.hpp                  |    8 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/handler_alloc_hook.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/handler_continuation_hook.hpp                |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/handler_invoke_hook.hpp                      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/high_resolution_timer.hpp                    |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/awaitable.hpp                           |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/buffered_read_stream.hpp                |  158 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/buffered_write_stream.hpp               |  148 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/co_spawn.hpp                            |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/compose.hpp                             |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/connect.hpp                             |  486 +-
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/defer.hpp                               |   90 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/detached.hpp                            |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/dispatch.hpp                            |   91 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/error.ipp                               |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/error_code.ipp                          |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/execution_context.hpp                   |   14 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/execution_context.ipp                   |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/executor.hpp                            |   31 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/executor.ipp                            |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/handler_alloc_hook.ipp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/io_context.hpp                          |  134 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/io_context.ipp                          |    7 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/post.hpp                                |   90 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/read.hpp                                |  662 ++
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/read_at.hpp                             |  211 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/read_until.hpp                          | 2258 ++++++++--
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/redirect_error.hpp                      |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/serial_port_base.hpp                    |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/serial_port_base.ipp                    |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/spawn.hpp                               |   47 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/src.cpp                                 |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/src.hpp                                 |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/system_context.hpp                      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/system_context.ipp                      |   11 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/system_executor.hpp                     |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/thread_pool.hpp                         |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/thread_pool.ipp                         |   21 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/use_awaitable.hpp                       |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/use_future.hpp                          |   52 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/write.hpp                               |  613 ++
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/impl/write_at.hpp                            |  212 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/io_context.hpp                               |   20 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/io_context_strand.hpp                        |   96 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/io_service.hpp                               |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/io_service_strand.hpp                        |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/address.hpp                               |   62 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/address_v4.hpp                            |   58 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/address_v4_iterator.hpp                   |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/address_v4_range.hpp                      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/address_v6.hpp                            |   77 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/address_v6_iterator.hpp                   |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/address_v6_range.hpp                      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/bad_address_cast.hpp                      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/basic_endpoint.hpp                        |   47 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/basic_resolver.hpp                        |  394 -
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/basic_resolver_entry.hpp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/basic_resolver_iterator.hpp               |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/basic_resolver_query.hpp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/basic_resolver_results.hpp                |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/detail/endpoint.hpp                       |   40 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/detail/impl/endpoint.ipp                  |   20 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/detail/socket_option.hpp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/host_name.hpp                             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/icmp.hpp                                  |   14 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/impl/address.hpp                          |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/impl/address.ipp                          |   41 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/impl/address_v4.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/impl/address_v4.ipp                       |   22 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/impl/address_v6.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/impl/address_v6.ipp                       |   52 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/impl/basic_endpoint.hpp                   |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/impl/host_name.ipp                        |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/impl/network_v4.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/impl/network_v4.ipp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/impl/network_v6.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/impl/network_v6.ipp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/multicast.hpp                             |   16 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/network_v4.hpp                            |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/network_v6.hpp                            |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/resolver_base.hpp                         |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/resolver_query_base.hpp                   |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/tcp.hpp                                   |   18 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/udp.hpp                                   |   14 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/unicast.hpp                               |    6 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ip/v6_only.hpp                               |    6 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/is_executor.hpp                              |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/is_read_buffered.hpp                         |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/is_write_buffered.hpp                        |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/local/basic_endpoint.hpp                     |   12 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/local/connect_pair.hpp                       |   33 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/local/datagram_protocol.hpp                  |    8 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/local/detail/endpoint.hpp                    |    8 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/local/detail/impl/endpoint.ipp               |    9 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/local/stream_protocol.hpp                    |    8 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/packaged_task.hpp                            |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/placeholders.hpp                             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/posix/basic_descriptor.hpp                   |  263 -
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/posix/basic_stream_descriptor.hpp            |  252 -
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/posix/descriptor.hpp                         |  617 --
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/posix/descriptor_base.hpp                    |    4 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/posix/stream_descriptor.hpp                  |  329 -
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/post.hpp                                     |   34 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/read.hpp                                     |  457 +-
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/read_at.hpp                                  |   81 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/read_until.hpp                               | 1209 ++++-
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/redirect_error.hpp                           |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/serial_port.hpp                              |  739 ---
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/serial_port_base.hpp                         |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/signal_set.hpp                               |  425 -
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/socket_base.hpp                              |   52 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/spawn.hpp                                    |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl.hpp                                      |    3 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/context.hpp                              |    5 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/context_base.hpp                         |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/detail/buffered_handshake_op.hpp         |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/detail/engine.hpp                        |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/detail/handshake_op.hpp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/detail/impl/engine.ipp                   |   28 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/detail/impl/openssl_init.ipp             |    6 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/detail/io.hpp                            |   17 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/detail/openssl_init.hpp                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/detail/openssl_types.hpp                 |    6 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/detail/password_callback.hpp             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/detail/read_op.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/detail/shutdown_op.hpp                   |   14 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/detail/stream_core.hpp                   |    9 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/detail/verify_callback.hpp               |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/detail/write_op.hpp                      |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/error.hpp                                |   28 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/host_name_verification.hpp               |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/impl/context.hpp                         |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/impl/context.ipp                         |   54 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/impl/error.ipp                           |    4 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/impl/host_name_verification.ipp          |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/impl/rfc2818_verification.ipp            |    6 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/impl/src.hpp                             |    3 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/rfc2818_verification.hpp                 |   10 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/stream.hpp                               |  319 -
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/stream_base.hpp                          |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/verify_context.hpp                       |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ssl/verify_mode.hpp                          |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/steady_timer.hpp                             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/strand.hpp                                   |   40 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/streambuf.hpp                                |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/system_context.hpp                           |    5 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/system_error.hpp                             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/system_executor.hpp                          |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/system_timer.hpp                             |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/this_coro.hpp                                |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/thread.hpp                                   |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/thread_pool.hpp                              |    5 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/time_traits.hpp                              |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ts/buffer.hpp                                |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ts/executor.hpp                              |    3 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ts/internet.hpp                              |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ts/io_context.hpp                            |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ts/net.hpp                                   |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ts/netfwd.hpp                                |   74 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ts/socket.hpp                                |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/ts/timer.hpp                                 |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/unyield.hpp                                  |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/use_awaitable.hpp                            |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/use_future.hpp                               |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/uses_executor.hpp                            |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/version.hpp                                  |    4 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/wait_traits.hpp                              |    2 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/windows/basic_object_handle.hpp              |  337 +
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/windows/basic_overlapped_handle.hpp          |only
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/windows/basic_random_access_handle.hpp       |  258 -
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/windows/basic_stream_handle.hpp              |  261 -
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/windows/object_handle.hpp                    |  349 -
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/windows/overlapped_handle.hpp                |  300 -
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/windows/overlapped_ptr.hpp                   |   45 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/windows/random_access_handle.hpp             |  347 -
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/windows/stream_handle.hpp                    |  331 -
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/write.hpp                                    |  428 +
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/write_at.hpp                                 |   81 
 AsioHeaders-1.16.1-1/AsioHeaders/inst/include/asio/yield.hpp                                    |    2 
 502 files changed, 15541 insertions(+), 10399 deletions(-)

More information about AsioHeaders at CRAN
Permanent link

Package zipfextR updated to version 1.0.2 with previous version 1.0.1 dated 2019-09-18

Title: Zipf Extended Distributions
Description: Implementation of four extensions of the Zipf distribution: the Marshall-Olkin Extended Zipf (MOEZipf) Pérez-Casany, M., & Casellas, A. (2013) <arXiv:1304.4540>, the Zipf-Poisson Extreme (Zipf-PE), the Zipf-Poisson Stopped Sum (Zipf-PSS) and the Zipf-Polylog distributions. In log-log scale, the two first extensions allow for top-concavity and top-convexity while the third one only allows for top-concavity. All the extensions maintain the linearity associated with the Zipf model in the tail.
Author: Ariel Duarte-López [aut, cre] (<https://orcid.org/0000-0002-7432-0344>), Marta Pérez-Casany [aut] (<https://orcid.org/0000-0003-3675-6902>)
Maintainer: Ariel Duarte-López <aduarte@ac.upc.edu>

Diff between zipfextR versions 1.0.1 dated 2019-09-18 and 1.0.2 dated 2020-07-07

 DESCRIPTION               |    6 +-
 MD5                       |   16 ++++-
 NAMESPACE                 |    6 ++
 R/zipfPolylog.R           |  125 ++++++++++++++++++++++++++++++++++++++++++++--
 R/zipfpe.R                |    5 +
 R/zipfpolylogMean.R       |only
 R/zipfpolylogMoments.R    |only
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 man/zipfPolylog.Rd        |   24 +++++++-
 man/zipfpolylogMean.Rd    |only
 man/zipfpolylogMoments.Rd |only
 man/zipfpoylogVariance.Rd |only
 12 files changed, 168 insertions(+), 14 deletions(-)

More information about zipfextR at CRAN
Permanent link

Package simplevis updated to version 1.5.0 with previous version 1.4.0 dated 2020-06-22

Title: Simple Visualisation with 'ggplot2' and 'leaflet' Wrappers
Description: Provides 'ggplot2' and 'leaflet' wrapper functions designed to simplify the creation of high quality graph and map visualisations. These functions only require inputs of data, variables and titles to provide beautiful interactive or image visualisations. However they allow for more flexibility if required. The intent is that high quality well-designed graphs and maps can be made more consistently with less effort, code and expertise than would otherwise be required.
Author: David Hodge [aut, cre] (<https://orcid.org/0000-0002-3868-7501>), Statistics New Zealand [cph]
Maintainer: David Hodge <davidhodge931@gmail.com>

Diff between simplevis versions 1.4.0 dated 2020-06-22 and 1.5.0 dated 2020-07-07

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 NEWS.md                                 |   75 ++++----
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 R/ggplot_line_fun.R                     |  141 ++++++++++++---
 R/ggplot_scatter_fun.R                  |  135 +++++++++++++-
 R/ggplot_vbar_fun.R                     |  300 +++++++++++++++++++++++---------
 R/leaflet_sf_fun.R                      |   13 -
 R/leaflet_stars_fun.R                   |    2 
 inst/doc/simplevis.html                 |    4 
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 inst/shiny/template1/make_app_vis.R     |   24 +-
 inst/shiny/template1/server.R           |   74 +++----
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More information about simplevis at CRAN
Permanent link

New package sbm with initial version 0.2.0
Package: sbm
Title: Stochastic Blockmodels
Version: 0.2.0
Authors@R: c(person(given = "Julien", family = "Chiquet", role = c("aut", "cre"), email = "julien.chiquet@inrae.fr", comment = c(ORCID = "0000-0002-3629-3429")), person(given = "Sophie", family = "Donnet", role = c("aut"), email = "sophie.donnet@inrae.fr"), person("großBM team", role = c("ctb")), person(given = "Pierre", family = "Barbillon", role = c("ctb"), email = "pierre.barbillon@agroparistech.fr", comment = c(ORCID = "0000-0002-7766-7693")))
Description: A collection of tools and function to adjust a variety of stochastic blockmodels (SBM). Support at the moment Simple and Bipartite SBM (undirected and directed) for Bernoulli, Poisson and Gaussian emission laws of the edges as described in Léger, 2016 <arxiv:1602.07587>.
URL: https://grosssbm.github.io/sbm/
BugReports: https://github.com/GrossSBM/sbm/issues
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
Suggests: testthat, spelling, knitr, rmarkdown, alluvial, igraph, aricode, covr
Language: en-US
Imports: magrittr, blockmodels, R6, Rcpp, ggplot2
Collate: 'R6Class-SBM.R' 'R6Class-SBM_fit.R' 'R6Class-BipartiteSBM_fit.R' 'R6Class-SBM_sampler.R' 'R6Class-BipartiteSBM_sampler.R' 'R6Class-SimpleSBM_fit.R' 'R6Class-SimpleSBM_sampler.R' 'RcppExports.R' 'estimate.R' 'fungus_tree_network.R' 'plotMyMatrix.R' 'sample.R' 'sbm-package.R' 'utils-pipe.R' 'utils.R'
LinkingTo: Rcpp, RcppArmadillo
VignetteBuilder: knitr
Depends: R (>= 3.5.0)
NeedsCompilation: yes
Packaged: 2020-07-06 21:07:38 UTC; jchiquet
Author: Julien Chiquet [aut, cre] (<https://orcid.org/0000-0002-3629-3429>), Sophie Donnet [aut], großBM team [ctb], Pierre Barbillon [ctb] (<https://orcid.org/0000-0002-7766-7693>)
Maintainer: Julien Chiquet <julien.chiquet@inrae.fr>
Repository: CRAN
Date/Publication: 2020-07-07 08:30:07 UTC

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New package NetworkReg with initial version 1.0
Package: NetworkReg
Type: Package
Title: Regression Model on Network-Linked Data with Statistical Inference
Version: 1.0
Date: 2020-07-02
Author: Can M. Le, Tianxi Li
Maintainer: Tianxi Li <tianxili@virginia.edu>
Description: Linear regression model with nonparametric network effects on network-linked observations. The model is proposed by Le and Li (2020) <arXiv:2007.00803> and is assumed on observations that are connected by a network or similar relational data structure. The model does not assume that the relational data or network structure to be precisely observed; thus, the method is provably robust to a certain level of perturbation of the network structure. The package contains the estimation and inference function for the model.
License: GPL (>= 2)
Imports: Matrix, stats, methods, randnet, RSpectra
NeedsCompilation: no
Packaged: 2020-07-06 17:34:02 UTC; tl9ut
Repository: CRAN
Date/Publication: 2020-07-07 09:00:07 UTC

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New package MRmediation with initial version 1.0.0
Package: MRmediation
Type: Package
Title: A Causal Mediation Method with Methylated Region (MR) as the Mediator
Version: 1.0.0
Author: Qi Yan
Maintainer: Qi Yan <qiy17@pitt.edu>
Description: A causal mediation approach under the counterfactual framework to test the significance of total, direct and indirect effects. In this approach, a group of methylated sites from a predefined region are utilized as the mediator, and the functional transformation is used to reduce the possible high dimension in the region-based methylated sites and account for their location information.
License: GPL (>= 2)
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.5.0), fda
Imports: MASS, stats
RoxygenNote: 7.1.0
Collate: 'MRmediation.R' 'example_data.R'
NeedsCompilation: no
Packaged: 2020-07-06 19:33:53 UTC; qiyan
Repository: CRAN
Date/Publication: 2020-07-07 09:00:10 UTC

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New package Keyboard with initial version 0.1.0
Package: Keyboard
Type: Package
Title: Bayesian Designs for Early Phase Clinical Trials
Version: 0.1.0
Author: Hongying Sun, Li Tang, and Haitao Pan
Maintainer: Hongying Sun <hongyingsun1101@gmail.com>
Imports: Iso
Suggests: epade
Description: We developed a package 'Keyboard' for designing single-agent, drug-combination, or phase I/II dose-finding clinical trials. The 'Keyboard' designs are novel early phase trial designs that can be implemented simply and transparently, similar to the 3+3 design, but yield excellent performance, comparable to those of more-complicated, model-based designs (Yan F, Mandrekar SJ, Yuan Y (2017) <doi:10.1158/1078-0432.CCR-17-0220>, Li DH, Whitmore JB, Guo W, Ji Y. (2017) <doi:10.1158/1078-0432.CCR-16-1125>, Liu S, Johnson VE (2016) <doi:10.1093/biostatistics/kxv040>, Zhou Y, Lee JJ, Yuan Y (2019) <doi:10.1002/sim.8475>, Pan H, Lin R, Yuan Y (2020) <doi:10.1016/j.cct.2020.105972). The 'Keyboard' package provides tools for designing, conducting, and analyzing single-agent, drug-combination, and phase I/II dose-finding clinical trials.
Depends: R (>= 3.4.0), Rcpp (>= 0.12.0), methods
License: GPL-2
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
Repository: CRAN
NeedsCompilation: no
Packaged: 2020-07-06 19:18:34 UTC; hongyingsun
Date/Publication: 2020-07-07 09:00:13 UTC

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Package florestal updated to version 0.1.1 with previous version 0.1.0 dated 2020-07-06

Title: Results for Forest Inventories
Description: The functions return sampling parameters for forest inventories with tables and graphics. Methods used in the package refers to Pellico e Brena (1997) <https://bit.ly/2BDbHJI>.
Author: Igor Cobelo Ferreira
Maintainer: Igor Cobelo Ferreira <cobelo.igor@gmail.com>

Diff between florestal versions 0.1.0 dated 2020-07-06 and 0.1.1 dated 2020-07-07

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Package bvpSolve updated to version 1.4.1 with previous version 1.4 dated 2020-05-26

Title: Solvers for Boundary Value Problems of Differential Equations
Description: Functions that solve boundary value problems ('BVP') of systems of ordinary differential equations ('ODE') and differential algebraic equations ('DAE'). The functions provide an interface to the FORTRAN functions 'twpbvpC', 'colnew/colsys', and an R-implementation of the shooting method. 'Mazzia, F., J.R. Cash and K. Soetaert, 2014. <DOI:10.7494/OpMath.2014.34.2.387>.
Author: Karline Soetaert [aut, cre] (<https://orcid.org/0000-0003-4603-7100>), Jeff Cash [aut], Francesca Mazzia [aut], Uri M. Ascher [ctb] (files colsysR.f, colnewR.f, coldaeR.f), G. Bader [ctb] (file colnewR.f), J. Christiansen [ctb] (file colsysR.f), Robert R. Russell [ctb] (file colsysR.f)
Maintainer: Karline Soetaert <karline.soetaert@nioz.nl>

Diff between bvpSolve versions 1.4 dated 2020-05-26 and 1.4.1 dated 2020-07-07

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New package BayesMassBal with initial version 0.2.0
Package: BayesMassBal
Type: Package
Title: Bayesian Data Reconciliation of Separation Processes
Version: 0.2.0
Author: Scott Koermer <skoermer@vt.edu>
Maintainer: Scott Koermer <skoermer@vt.edu>
Description: Bayesian tools that can be used to reconcile, or mass balance, mass flow rate data collected from chemical or particulate separation processes aided by constraints governed by the conservation of mass. Functions included in the package aid the user in organizing and constraining data, using Markov chain Monte Carlo methods to obtain samples from Bayesian models, and in computation of the marginal likelihood of the data, given a particular model, for model selection. Marginal likelihood is approximated by methods in Chib S (1995) <doi:10.2307/2291521>.
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
Imports: Rdpack, Matrix, MASS, pracma, tmvtnorm, LaplacesDemon, HDInterval
RdMacros: Rdpack
Suggests: knitr, rmarkdown, covr, spelling, tgp, testthat
VignetteBuilder: knitr
URL: https://github.com/skoermer/BayesMassBal
BugReports: https://github.com/skoermer/BayesMassBal/issues
Language: en-US
NeedsCompilation: no
Packaged: 2020-07-06 20:02:31 UTC; Scott
Repository: CRAN
Date/Publication: 2020-07-07 09:00:16 UTC

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Package vdiffr updated to version 0.3.2.2 with previous version 0.3.2.1 dated 2020-06-28

Title: Visual Regression Testing and Graphical Diffing
Description: An extension to the 'testthat' package that makes it easy to add graphical unit tests. It provides a Shiny application to manage the test cases.
Author: Lionel Henry [cre, aut], RStudio [cph], Carl Sutherland [aut] (jg-imagediff library), Humble Software [cph] (jg-imagediff library), David Hong [aut] (TwoFace library), jQuery Foundation [cph] (jQuery library), jQuery contributors [ctb, cph] (jQuery library; authors listed in inst/htmlwidgets/lib/jquery-authors.txt), T Jake Luciani [aut] (svglite), Matthieu Decorde [aut] (svglite), Vaudor Lise [aut] (svglite), Tony Plate [ctb] (svglite: Early line dashing code), David Gohel [ctb] (svglite: Line dashing code and raster code), Yixuan Qiu [ctb] (svglite: Improved styles; polypath implementation), Håkon Malmedal [ctb] (svglite: Opacity code)
Maintainer: Lionel Henry <lionel@rstudio.com>

Diff between vdiffr versions 0.3.2.1 dated 2020-06-28 and 0.3.2.2 dated 2020-07-07

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Package svglite updated to version 1.2.3.2 with previous version 1.2.3.1 dated 2020-06-28

Title: An 'SVG' Graphics Device
Description: A graphics device for R that produces 'Scalable Vector Graphics'. 'svglite' is a fork of the older 'RSvgDevice' package.
Author: Hadley Wickham [aut], Lionel Henry [aut], Thomas Lin Pedersen [cre, aut] (<https://orcid.org/0000-0002-5147-4711>), T Jake Luciani [aut], Matthieu Decorde [aut], Vaudor Lise [aut], Tony Plate [ctb] (Early line dashing code), David Gohel [ctb] (Line dashing code and raster code), Yixuan Qiu [ctb] (Improved styles; polypath implementation), Håkon Malmedal [ctb] (Opacity code), RStudio [cph]
Maintainer: Thomas Lin Pedersen <thomas.pedersen@rstudio.com>

Diff between svglite versions 1.2.3.1 dated 2020-06-28 and 1.2.3.2 dated 2020-07-07

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Package cairoDevice updated to version 2.28.2 with previous version 2.28.1 dated 2020-06-28

Title: Embeddable Cairo Graphics Device Driver
Description: This device uses Cairo and GTK to draw to the screen, file (png, svg, pdf, and ps) or memory (arbitrary GdkDrawable or Cairo context). The screen device may be embedded into RGtk2 interfaces and supports all interactive features of other graphics devices, including getGraphicsEvent().
Author: Michael Lawrence
Maintainer: Michael Lawrence <michafla@gene.com>

Diff between cairoDevice versions 2.28.1 dated 2020-06-28 and 2.28.2 dated 2020-07-07

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Package Cairo updated to version 1.5-12.2 with previous version 1.5-12.1 dated 2020-06-28

Title: R Graphics Device using Cairo Graphics Library for Creating High-Quality Bitmap (PNG, JPEG, TIFF), Vector (PDF, SVG, PostScript) and Display (X11 and Win32) Output
Description: R graphics device using cairographics library that can be used to create high-quality vector (PDF, PostScript and SVG) and bitmap output (PNG,JPEG,TIFF), and high-quality rendering in displays (X11 and Win32). Since it uses the same back-end for all output, copying across formats is WYSIWYG. Files are created without the dependence on X11 or other external programs. This device supports alpha channel (semi-transparent drawing) and resulting images can contain transparent and semi-transparent regions. It is ideal for use in server environments (file output) and as a replacement for other devices that don't have Cairo's capabilities such as alpha support or anti-aliasing. Backends are modular such that any subset of backends is supported.
Author: Simon Urbanek <Simon.Urbanek@r-project.org>, Jeffrey Horner <jeff.horner@vanderbilt.edu>
Maintainer: Simon Urbanek <Simon.Urbanek@r-project.org>

Diff between Cairo versions 1.5-12.1 dated 2020-06-28 and 1.5-12.2 dated 2020-07-07

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Package zipangu updated to version 0.2.1 with previous version 0.2.0 dated 2020-01-10

Title: Japanese Utility Functions and Data
Description: Some data treated by the Japanese R user require unique operations and processing. These are caused by address, Kanji, and traditional year representations. 'zipangu' transforms specific to Japan into something more general one.
Author: Shinya Uryu [aut, cre] (<https://orcid.org/0000-0002-0493-6186>), Hiroaki Yutani [ctb] (<https://orcid.org/0000-0002-3385-7233>), Kazuhiro Maeda [ctb]
Maintainer: Shinya Uryu <suika1127@gmail.com>

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Package iheatmapr updated to version 0.5.0 with previous version 0.4.12 dated 2019-11-23

Title: Interactive, Complex Heatmaps
Description: Make complex, interactive heatmaps. 'iheatmapr' includes a modular system for iteratively building up complex heatmaps, as well as the iheatmap() function for making relatively standard heatmaps.
Author: Alicia Schep [aut, cre] (<https://orcid.org/0000-0002-3915-0618>), Sarah Kummerfeld [aut] (<https://orcid.org/0000-0002-0089-2358>), Genentech [cph], Andee Kaplan [rev] (Reviewer for rOpensci review process https://github.com/ropensci/onboarding/issues/107), Carl Ganz [rev] (Reviewer for rOpensci review process https://github.com/ropensci/onboarding/issues/107), Alex Johnson [ctb] (plotly.js library), Étienne Tétreault-Pinard [ctb] (plotly.js library), Mikola Lysenko [ctb] (plotly.js library), Ricky Reusser [ctb] (plotly.js library), Robert Monfera [ctb] (plotly.js library), Nicolas Riesco [ctb] (plotly.js library), Miklós Tusz [ctb] (plotly.js library), Chelsea Douglas [ctb] (plotly.js library), Ben Postlethwaite [ctb] (plotly.js library), Chris Parmer [ctb] (plotly.js library), Alex Vados [ctb] (plotly.js library), Plotly [cph] (plotly.js library), Frederick Boehm [ctb] (colorbars & main_heatmap)
Maintainer: Alicia Schep <aschep@gmail.com>

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 man/modify_layout.Rd                                                        |    1 
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Package ecap updated to version 0.1.1 with previous version 0.1.0 dated 2020-06-29

Title: Excess Certainty Adjusted Probability Estimate
Description: Implements the Excess Certainty Adjusted Probability adjustment procedure as described in the paper "Irrational Exuberance: Correcting Bias in Probability Estimates" by Gareth James, Peter Radchenko, and Bradley Rava (Journal of the American Statistical Association, 2020; <arXiv:1910.13570>). The package includes a function that preforms the ECAP adjustment and a function that estimates the parameters needed for implementing ECAP. For testing and reproducibility, the ESPN and FiveThirtyEight data used in the paper are also included.
Author: Bradley Rava, Peter Radchenko, and Gareth M. James
Maintainer: Bradley Rava <brava@marshall.usc.edu>

Diff between ecap versions 0.1.0 dated 2020-06-29 and 0.1.1 dated 2020-07-07

 DESCRIPTION |    6 +++---
 MD5         |    8 ++++----
 NEWS        |    6 +++++-
 R/ecap.R    |    6 +++++-
 man/ecap.Rd |    2 +-
 5 files changed, 18 insertions(+), 10 deletions(-)

More information about ecap at CRAN
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