Sat, 25 Jul 2020

Package survminer updated to version 0.4.8 with previous version 0.4.7 dated 2020-05-28

Title: Drawing Survival Curves using 'ggplot2'
Description: Contains the function 'ggsurvplot()' for drawing easily beautiful and 'ready-to-publish' survival curves with the 'number at risk' table and 'censoring count plot'. Other functions are also available to plot adjusted curves for `Cox` model and to visually examine 'Cox' model assumptions.
Author: Alboukadel Kassambara [aut, cre], Marcin Kosinski [aut], Przemyslaw Biecek [aut], Scheipl Fabian [ctb]
Maintainer: Alboukadel Kassambara <alboukadel.kassambara@gmail.com>

Diff between survminer versions 0.4.7 dated 2020-05-28 and 0.4.8 dated 2020-07-25

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Package rvest updated to version 0.3.6 with previous version 0.3.5 dated 2019-11-08

Title: Easily Harvest (Scrape) Web Pages
Description: Wrappers around the 'xml2' and 'httr' packages to make it easy to download, then manipulate, HTML and XML.
Author: Hadley Wickham [aut, cre], RStudio [cph]
Maintainer: Hadley Wickham <hadley@rstudio.com>

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Package robotstxt updated to version 0.7.8 with previous version 0.7.7 dated 2020-06-27

Title: A 'robots.txt' Parser and 'Webbot'/'Spider'/'Crawler' Permissions Checker
Description: Provides functions to download and parse 'robots.txt' files. Ultimately the package makes it easy to check if bots (spiders, crawler, scrapers, ...) are allowed to access specific resources on a domain.
Author: Peter Meissner [aut, cre], Kun Ren [aut, cph] (Author and copyright holder of list_merge.R.), Oliver Keys [ctb] (original release code review), Rich Fitz John [ctb] (original release code review)
Maintainer: Peter Meissner <retep.meissner@gmail.com>

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Package rcarbon updated to version 1.3.2 with previous version 1.3.1 dated 2020-03-18

Title: Calibration and Analysis of Radiocarbon Dates
Description: Enables the calibration and analysis of radiocarbon dates, often but not exclusively for the purposes of archaeological research. It includes functions not only for basic calibration, uncalibration, and plotting of one or more dates, but also a statistical framework for building demographic and related longitudinal inferences from aggregate radiocarbon date lists, including: Monte-Carlo simulation test (Timpson et al 2014 <doi:10.1016/j.jas.2014.08.011>), random mark permutation test (Crema et al 2016 <doi:10.1371/journal.pone.0154809>) and spatial permutation tests (Crema, Bevan, and Shennan 2017 <doi:10.1016/j.jas.2017.09.007>).
Author: Andrew Bevan [aut], Enrico Crema [aut, cre], R. Kyle Bocinsky [ctb], Martin Hinz [ctb], Philip Riris [ctb], Fabio Silva [ctb]
Maintainer: Enrico Crema <enrico.crema@gmail.com>

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Package paleobioDB updated to version 0.7.0 with previous version 0.6.0 dated 2019-02-26

Title: Download and Process Data from the Paleobiology Database
Description: Includes 19 functions to wrap each endpoint of the PaleobioDB API, plus 8 functions to visualize and process the fossil data. The API documentation for the Paleobiology Database can be found in <http://paleobiodb.org/data1.1/>.
Author: Sara Varela [aut, cre], Javier González Hernández [aut], Luciano Fabris Sgarbi [aut]
Maintainer: Sara Varela <svarela@paleobiogeography.org>

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Package MVNtestchar updated to version 1.1.3 with previous version 1.1.2 dated 2020-07-18

Title: Test for Multivariate Normal Distribution Based on a Characterization
Description: Provides a test of multivariate normality of an unknown sample that does not require estimation of the nuisance parameters, the mean and covariance matrix. Rather, a sequence of transformations removes these nuisance parameters and results in a set of sample matrices that are positive definite. These matrices are uniformly distributed on the space of positive definite matrices in the unit hyper-rectangle if and only if the original data is multivariate normal (Fairweather, 1973, Doctoral dissertation, University of Washington). The package performs a goodness of fit test of this hypothesis. In addition to the test, functions in the package give visualizations of the support region of positive definite matrices for bivariate samples.
Author: William Fairweather [aut, cre]
Maintainer: William Fairweather <wrf343@flowervalleyconsulting.com>

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Package mlr3proba updated to version 0.2.0 with previous version 0.1.6 dated 2020-06-05

Title: Probabilistic Supervised Learning for 'mlr3'
Description: Provides extensions for probabilistic supervised learning for 'mlr3'. This includes extending the regression task to probabilistic and interval regression, adding a survival task, and other specialized models, predictions, and measures.
Author: Raphael Sonabend [aut, cre] (<https://orcid.org/0000-0001-9225-4654>), Franz Kiraly [aut], Michel Lang [aut] (<https://orcid.org/0000-0001-9754-0393>), Nurul Ain Toha [ctb], Andreas Bender [ctb] (<https://orcid.org/0000-0001-5628-8611>)
Maintainer: Raphael Sonabend <raphael.sonabend.15@ucl.ac.uk>

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Package gdalUtilities updated to version 1.1.1 with previous version 1.1.0 dated 2020-04-29

Title: Wrappers for 'GDAL' Utilities Executables
Description: R's 'sf' package ships with self-contained 'GDAL' executables, including a bare bones interface to several 'GDAL'-related utility programs collectively known as the 'GDAL utilities'. For each of those utilities, this package provides an R wrapper whose formal arguments closely mirror those of the 'GDAL' command line interface. The utilities operate on data stored in files and typically write their output to other files. Therefore, to process data stored in any of R's more common spatial formats (i.e. those supported by the 'sp', 'sf', and 'raster' packages), first write them to disk, then process them with the package's wrapper functions before reading the outputted results back into R.
Author: Joshua O'Brien
Maintainer: Joshua O'Brien <joshmobrien@gmail.com>

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Package contextual updated to version 0.9.8.4 with previous version 0.9.8.3 dated 2020-03-04

Title: Simulation and Analysis of Contextual Multi-Armed Bandit Policies
Description: Facilitates the simulation and evaluation of context-free and contextual multi-Armed Bandit policies or algorithms to ease the implementation, evaluation, and dissemination of both existing and new bandit algorithms and policies.
Author: Robin van Emden [aut, cre] (<https://orcid.org/0000-0001-5820-8638>), Maurits Kaptein [ctb] (<https://orcid.org/0000-0002-6316-7524>)
Maintainer: Robin van Emden <robinvanemden@gmail.com>

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 contextual-0.9.8.4/contextual/MD5                                                                                     |  237 ++--
 contextual-0.9.8.4/contextual/NAMESPACE                                                                               |    2 
 contextual-0.9.8.4/contextual/NEWS.md                                                                                 |   11 
 contextual-0.9.8.4/contextual/R/agent.R                                                                               |    5 
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 contextual-0.9.8.4/contextual/man/dec-set.Rd                                                                          |   42 
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 contextual-0.9.8.4/contextual/man/ind.Rd                                                                              |   32 
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Package choroplethr updated to version 3.6.4 with previous version 3.6.3 dated 2018-08-15

Title: Simplify the Creation of Choropleth Maps in R
Description: Choropleths are thematic maps where geographic regions, such as states, are colored according to some metric, such as the number of people who live in that state. This package simplifies this process by 1. Providing ready-made functions for creating choropleths of common maps. 2. Providing data and API connections to interesting data sources for making choropleths. 3. Providing a framework for creating choropleths from arbitrary shapefiles. 4. Overlaying those maps over reference maps from Google Maps.
Author: Ari Lamstein [aut, cre], Brian Johnson [ctb], Trulia, Inc. [cph]
Maintainer: Ari Lamstein <ari@lamsteinconsulting.com>

Diff between choroplethr versions 3.6.3 dated 2018-08-15 and 3.6.4 dated 2020-07-25

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Package assignPOP updated to version 1.2.0 with previous version 1.1.9 dated 2020-03-16

Title: Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework
Description: Use Monte-Carlo and K-fold cross-validation coupled with machine- learning classification algorithms to perform population assignment, with functionalities of evaluating discriminatory power of independent training samples, identifying informative loci, reducing data dimensionality for genomic data, integrating genetic and non-genetic data, and visualizing results.
Author: Kuan-Yu (Alex) Chen [aut, cre], Elizabeth A. Marschall [aut], Michael G. Sovic [aut], Anthony C. Fries [aut], H. Lisle Gibbs [aut], Stuart A. Ludsin [aut]
Maintainer: Kuan-Yu (Alex) Chen <alexkychen@gmail.com>

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More information about assignPOP at CRAN
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Package robregcc updated to version 1.1 with previous version 1.0 dated 2019-10-14

Title: Robust Regression with Compositional Covariates
Description: We implement the algorithm estimating the parameters of the robust regression model with compositional covariates. The model simultaneously treats outliers and provides reliable parameter estimates. Publication reference: Mishra, A., Mueller, C.,(2019) <arXiv:1909.04990>.
Author: Aditya Mishra [aut, cre], Christian Muller [ctb]
Maintainer: Aditya Mishra <amishra@flatironinstitute.org>

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Package collections updated to version 0.3.4 with previous version 0.3.3 dated 2020-06-14

Title: High Performance Container Data Types
Description: Provides high performance container data types such as queues, stacks, deques, dicts and ordered dicts. Benchmarks <https://randy3k.github.io/collections/articles/benchmark.html> have shown that these containers are asymptotically more efficient than those offered by other packages.
Author: Randy Lai [aut, cre], Andrea Mazzoleni [cph] (tommy hash table library), Yann Collet [cph] (xxhash algorithm)
Maintainer: Randy Lai <randy.cs.lai@gmail.com>

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New package sarp.snowprofile with initial version 1.0.0
Package: sarp.snowprofile
Version: 1.0.0
Date: 2020-07-20
Title: Snow Profile Analysis for Snowpack and Avalanche Research
Authors@R: c( person(given = "Pascal", family = "Haegeli", role = c("aut", "cre"), email = "pascal_haegeli@sfu.ca"), person(given = "Simon", family = "Horton", role = "aut", email = "shorton@sfu.ca"), person(given = "Florian", family = "Herla", role = "aut", email = "fherla@sfu.ca"), person("SFU Avalanche Research Program", role = "fnd") )
Description: Analysis and plotting tools for snow profile data produced from manual snowpack observations and physical snowpack models. The functions in this package support snowpack and avalanche research by reading various formats of data (including CAAML, SMET, generic csv, and outputs from the snow cover model SNOWPACK), manipulate the data, and produce graphics such as stratigraphy and time series profiles. Package developed by the Simon Fraser University Avalanche Research Program <http://www.avalancheresearch.ca>. Graphics apply visualization concepts from Horton, Nowak, and Haegeli (2020, <doi:10.5194/nhess-20-1557-2020>).
URL: http://www.avalancheresearch.ca
License: CC BY-SA 4.0
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Language: en-CA
Imports: data.table, methods, xml2,
Depends: R (>= 2.10)
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2020-07-20 16:13:30 UTC; shorton
Author: Pascal Haegeli [aut, cre], Simon Horton [aut], Florian Herla [aut], SFU Avalanche Research Program [fnd]
Maintainer: Pascal Haegeli <pascal_haegeli@sfu.ca>
Repository: CRAN
Date/Publication: 2020-07-25 11:00:02 UTC

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Package owd (with last version 1.0.4) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2020-07-24 1.0.4

Permanent link
Package vistime updated to version 1.1.0 with previous version 1.0.0 dated 2020-04-17

Title: Pretty Timelines
Description: A library for creating time based charts, like Gantt or timelines. Possible outputs include 'ggplot' diagrams, 'Plotly' graphs, 'Highchart' widgets and 'data.frames'. Results can be used in the 'RStudio' viewer pane, in 'RMarkdown' documents or in 'Shiny' apps. In the interactive outputs created by 'Plotly.js' and 'Highcharts.js', you can interact with the plot using mouse hover or zoom.
Author: Sandro Raabe [aut, cre]
Maintainer: Sandro Raabe <sa.ra.online@posteo.de>

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Package uiucthemes updated to version 0.3.1 with previous version 0.3.0 dated 2019-10-02

Title: 'R' 'Markdown' Themes for 'UIUC' Documents and Presentations
Description: A set of custom 'R' 'Markdown' templates for documents and presentations with the University of Illinois at Urbana-Champaign (UIUC) color scheme and identity standards.
Author: James Balamuta [aut, cre] (<https://orcid.org/0000-0003-2826-8458>), Steven Andrew Culpepper [ctb] (Provided the Minimal Orange Beamer Theme), David Dalpiaz [ctb] (Collaborated on the LaTeX Journal Theme), Jose Luis Rodriguez [ctb] (Provided the Market Information Lab (MIL) Beamer Theme)
Maintainer: James Balamuta <balamut2@illinois.edu>

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Package gpindex updated to version 0.1.2 with previous version 0.1.1 dated 2020-06-14

Title: Generalized Price and Quantity Indexes
Description: A small package for calculating lots of different price indexes, and by extension quantity indexes. Provides tools to build and work with any type of generalized bilateral index (of which most price indexes are), along with a few important indexes that don't belong to the generalized family. Implements and extends many of the methods in Balk (2008, ISBN:978-1-107-40496-0) and ILO, IMF, OECD, Eurostat, UN, and World Bank (2004, ISBN:92-2-113699-X) for bilateral price indexes.
Author: Steve Martin [aut, cre, cph]
Maintainer: Steve Martin <stevemartin041@gmail.com>

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Package extRC updated to version 1.1 with previous version 1.0 dated 2020-01-13

Title: Extended RC Models for Contingency Tables
Description: Maximum likelihood estimation of an extended class of row-column (RC) association models for two-dimensional contingency tables, which are formulated by a condition of reduced rank on a matrix of extended association parameters; see Forcina (2019) <arXiv:1910.13848>. These parameters are defined by choosing the logit type for the row and column variables among four different options and a transformation derived from suitable divergence measures.
Author: Francesco Bartolucci, Antonio Forcina
Maintainer: Francesco Bartolucci <francesco.bartolucci@unipg.it>

Diff between extRC versions 1.0 dated 2020-01-13 and 1.1 dated 2020-07-25

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Package causact updated to version 0.3.3 with previous version 0.3.2 dated 2020-07-09

Title: Accelerated Bayesian Analytics with DAGs
Description: Accelerate Bayesian analytics workflows in 'R' through interactive modelling, visualization, and inference. Define probabilistic graphical models using directed acyclic graphs (DAGs) as a unifying language for business stakeholders, statisticians, and programmers. This package relies on the sleek and elegant 'greta' package for Bayesian inference. 'greta', in turn, is an interface into 'TensorFlow' from 'R'. Install 'greta' using instructions available here: <http://www.causact.com/install-tensorflow-greta-and-causact.html>. See <http://github.com/flyaflya/causact> or <http://causact.com> for more documentation.
Author: Adam Fleischhacker [aut, cre, cph], Daniela Dapena [ctb], Rose Nguyen [ctb], Jared Sharpe [ctb]
Maintainer: Adam Fleischhacker <ajf@udel.edu>

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Package arrow updated to version 1.0.0 with previous version 0.17.1 dated 2020-05-19

Title: Integration to 'Apache' 'Arrow'
Description: 'Apache' 'Arrow' <https://arrow.apache.org/> is a cross-language development platform for in-memory data. It specifies a standardized language-independent columnar memory format for flat and hierarchical data, organized for efficient analytic operations on modern hardware. This package provides an interface to the 'Arrow C++' library.
Author: Romain François [aut] (<https://orcid.org/0000-0002-2444-4226>), Jeroen Ooms [aut], Neal Richardson [aut, cre], Javier Luraschi [ctb], Jeffrey Wong [ctb], Apache Arrow [aut, cph]
Maintainer: Neal Richardson <neal@ursalabs.org>

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 arrow-1.0.0/arrow/tests/testthat/test-dplyr.R               |   18 
 arrow-1.0.0/arrow/tests/testthat/test-expression.R          |   52 
 arrow-1.0.0/arrow/tests/testthat/test-feather.R             |   27 
 arrow-1.0.0/arrow/tests/testthat/test-filesystem.R          |   15 
 arrow-1.0.0/arrow/tests/testthat/test-json.R                |    2 
 arrow-1.0.0/arrow/tests/testthat/test-metadata.R            |only
 arrow-1.0.0/arrow/tests/testthat/test-parquet.R             |   22 
 arrow-1.0.0/arrow/tests/testthat/test-python.R              |   28 
 arrow-1.0.0/arrow/tests/testthat/test-read-record-batch.R   |    8 
 arrow-1.0.0/arrow/tests/testthat/test-read-write.R          |   45 
 arrow-1.0.0/arrow/tests/testthat/test-record-batch-reader.R |   23 
 arrow-1.0.0/arrow/tests/testthat/test-scalar.R              |only
 arrow-1.0.0/arrow/tests/testthat/test-schema.R              |    9 
 arrow-1.0.0/arrow/tests/testthat/test-type.R                |    2 
 arrow-1.0.0/arrow/tests/testthat/test-utf.R                 |only
 arrow-1.0.0/arrow/tools/autobrew                            |   16 
 arrow-1.0.0/arrow/tools/linuxlibs.R                         |  185 +
 arrow-1.0.0/arrow/tools/winlibs.R                           |    4 
 arrow-1.0.0/arrow/vignettes/arrow.Rmd                       |  128 +
 arrow-1.0.0/arrow/vignettes/dataset.Rmd                     |    5 
 arrow-1.0.0/arrow/vignettes/install.Rmd                     |   15 
 145 files changed, 5211 insertions(+), 2796 deletions(-)

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Previous versions (as known to CRANberries) which should be available via the Archive link are:

2018-12-03 0.1.8
2018-02-14 0.1.7
2016-03-17 0.1.6
2016-03-06 0.1.5
2016-01-26 0.1.4
2016-01-09 0.1.3
2016-01-08 0.1.2
2015-11-16 0.1.1
2015-11-06 0.1.0

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