Title: Zero-Truncated Poisson Lognormal Distribution
Description: Functions for obtaining the density, random variates
and maximum likelihood estimates of the Zero-truncated Poisson lognormal
distribution and their mixture distribution.
Author: Masatoshi Katabuchi
Maintainer: Masatoshi Katabuchi <mattocci27@gmail.com>
Diff between ztpln versions 0.1.0 dated 2020-07-24 and 0.1.1 dated 2020-07-27
DESCRIPTION | 11 +-- MD5 | 10 +-- NAMESPACE | 7 -- R/ztpln.r | 7 -- inst/doc/ztpln.html | 150 +++++++++++++++++++++++++--------------------------- src/dztpln.cpp | 10 ++- 6 files changed, 93 insertions(+), 102 deletions(-)
Title: Download Data from the Reserve Bank of New Zealand Website
Description: Provides a convenient way of accessing data published by the Reserve Bank of New Zealand (RBNZ) on their website, <https://www.rbnz.govt.nz/statistics>. A range of financial and economic data is provided in spreadsheet format including exchange and interest rates, commercial lending statistics, Reserve Bank market operations, financial institution statistics, household financial data, New Zealand debt security information, and economic indicators. This package provides a method to download those spreadsheets and read them directly into R.
Author: Jasper Watson [aut, cre]
Maintainer: Jasper Watson <jasper.g.watson@gmail.com>
Diff between RBNZ versions 1.0.1 dated 2020-04-10 and 1.1.0 dated 2020-07-27
DESCRIPTION | 8 MD5 | 22 +- NEWS.md | 4 R/availableData.R | 2 R/readSeriesPage.R | 2 R/readSpreadsheet.R | 15 + R/seriesDescriptions.R | 22 ++ R/seriesOptions.R | 2 README.md | 16 + build/vignette.rds |binary inst/doc/Overview.html | 486 ++++++++++++++++++++++++++++++------------------- man/C65.Rd |only man/C66.Rd |only 13 files changed, 373 insertions(+), 206 deletions(-)
Title: Supervised Data Transformation by Means of Neural Network Hidden
Layer
Description: A supervised transformation of datasets is performed.
The aim is similar to that of Principal Component Analysis (PCA), that is, to carry out data transformation and dimensionality reduction, but in a non-linear supervised way.
This is achieved by first training a 3-layer Multi-Layer Perceptron and then using the activations of the hidden layer as a transformation of the input features.
In fact, it takes advantage of the change of representation provided by the hidden layer of a neural network.
This can be useful as data pre-processing for Machine Learning methods in general, specially for those that do not work well with many irrelevant or redundant features.
Rumelhart, D.E., Hinton, G.E. and Williams, R.J. (1986) "Learning representations by back-propagating errors" <doi:10.1038/323533a0>.
Author: Ricardo Aler [aut, cre],
Jose Valls [aut],
Ines Galvan [aut],
David Camacho [aut]
Maintainer: Ricardo Aler <ricardo.aler@uc3m.es>
Diff between nntrf versions 0.1.1 dated 2020-07-21 and 0.1.2 dated 2020-07-27
nntrf-0.1.1/nntrf/inst/error_knn_nntrf.rda |only nntrf-0.1.1/nntrf/inst/error_knn_nntrf_tune.rda |only nntrf-0.1.1/nntrf/inst/error_knn_nntrf_tune5.rda |only nntrf-0.1.1/nntrf/inst/error_knn_pca_tune.rda |only nntrf-0.1.1/nntrf/inst/error_knn_tune.rda |only nntrf-0.1.2/nntrf/DESCRIPTION | 8 nntrf-0.1.2/nntrf/MD5 | 39 +- nntrf-0.1.2/nntrf/NAMESPACE | 1 nntrf-0.1.2/nntrf/NEWS.md | 4 nntrf-0.1.2/nntrf/R/nntrf.R | 132 ++++++++- nntrf-0.1.2/nntrf/README.md | 2 nntrf-0.1.2/nntrf/inst/doc/nntrf.R | 27 + nntrf-0.1.2/nntrf/inst/doc/nntrf.Rmd | 33 +- nntrf-0.1.2/nntrf/inst/doc/nntrf.html | 41 +-- nntrf-0.1.2/nntrf/inst/doc/nntrf_tuning.R | 163 ++++++++---- nntrf-0.1.2/nntrf/inst/doc/nntrf_tuning.Rmd | 192 +++++++++----- nntrf-0.1.2/nntrf/inst/doc/nntrf_tuning.html | 311 ++++++++++++++--------- nntrf-0.1.2/nntrf/inst/extdata |only nntrf-0.1.2/nntrf/man/nntrf.Rd | 27 + nntrf-0.1.2/nntrf/vignettes/nntrf.Rmd | 33 +- nntrf-0.1.2/nntrf/vignettes/nntrf_tuning.Rmd | 192 +++++++++----- 21 files changed, 821 insertions(+), 384 deletions(-)
Title: Journal Abbreviations for BibTeX Documents
Description: Since the reference management software (such as 'Zotero', 'Mendeley') exports Bib file journal abbreviation is not detailed enough, the 'journalabbr' package only abbreviates the journal field of Bib file, and then outputs a new Bib file for generating reference format with journal abbreviation on other software (such as 'texstudio'). The abbreviation table is from 'JabRef'. At the same time, 'Shiny' application is provided to generate 'thebibliography', a reference format that can be directly used for latex paper writing based on 'Rmd' files.
Author: ShuCai Zou [aut, cre],
Yu Chen [aut]
Maintainer: ShuCai Zou <zscmoyujian@163.com>
Diff between journalabbr versions 0.2.0 dated 2020-07-26 and 0.2.1 dated 2020-07-27
DESCRIPTION | 6 +-- MD5 | 4 +- inst/shiny-examples/appckwx/app.R | 60 +++++++++++++++++++++++++------------- 3 files changed, 45 insertions(+), 25 deletions(-)
Title: Download and Augment the Corpus of Plenary Protocols of the
German Bundestag
Description: Data package to disseminate the 'GermaParl' corpus of parliamentary debates of
the German Bundestag prepared in the 'PolMine Project'. The package includes a small subset of
the corpus for demonstration and testing purposes. The package includes functionality to
download the full corpus and supplementary data from the open science repository 'Zenodo'.
Author: Andreas Blaette [aut, cre],
Christoph Leonhardt [ctb]
Maintainer: Andreas Blaette <andreas.blaette@uni-due.de>
Diff between GermaParl versions 1.5.0 dated 2020-07-24 and 1.5.1 dated 2020-07-27
DESCRIPTION | 10 +++++----- MD5 | 22 +++++++++++----------- NEWS.md | 8 ++++++++ R/GermaParl.R | 39 ++++++++++++++++++++++++++++++++++++--- README.md | 9 ++++----- data/germaparl_stats.RData |binary inst/doc/GermaParl.R | 14 +++++++++++++- inst/doc/GermaParl.Rmd | 18 ++++++++++++++++-- inst/doc/GermaParl.html | 31 +++++++++++++++++++++++++++---- man/germaparl_by_lp.Rd | 29 ++++++++++++++++++++++------- man/germaparl_by_year.Rd | 21 +++++++++++++++++++-- vignettes/GermaParl.Rmd | 18 ++++++++++++++++-- 12 files changed, 177 insertions(+), 42 deletions(-)
Title: Capture Hi-C Analysis Engine
Description: Toolkit for processing and calling interactions in capture Hi-C data. Converts BAM files into counts of reads linking restriction fragments, and identifies pairs of fragments that interact more than expected by chance. Significant interactions are identified by comparing the observed read count to the expected background rate from a count regression model.
Author: Erle Holgersen [aut, cre],
Olivia Leavy [aut],
Olivia Fletcher [aut],
Frank Dudbridge [aut],
Syed Haider [aut]
Maintainer: Erle Holgersen <erle.holgersen@gmail.com>
Diff between chicane versions 0.1.1 dated 2019-10-01 and 0.1.2 dated 2020-07-27
chicane-0.1.1/chicane/R/make.modelfit.plot.R |only chicane-0.1.1/chicane/man/make.modelfit.plot.Rd |only chicane-0.1.1/chicane/vignettes/Introduction_cache |only chicane-0.1.2/chicane/DESCRIPTION | 19 chicane-0.1.2/chicane/MD5 | 97 - chicane-0.1.2/chicane/NAMESPACE | 13 chicane-0.1.2/chicane/NEWS | 7 chicane-0.1.2/chicane/R/chicane.R | 4 chicane-0.1.2/chicane/R/compare.replicates.R |only chicane-0.1.2/chicane/R/convert.standard.format.R |only chicane-0.1.2/chicane/R/convert.to.one.based.R |only chicane-0.1.2/chicane/R/create.locus.plot.R |only chicane-0.1.2/chicane/R/create.modelfit.plot.R |only chicane-0.1.2/chicane/R/distance.bin.R | 1 chicane-0.1.2/chicane/R/fit.model.R | 3 chicane-0.1.2/chicane/R/get.components.R |only chicane-0.1.2/chicane/R/get.interaction.id.R |only chicane-0.1.2/chicane/R/model.try.catch.R | 14 chicane-0.1.2/chicane/R/run.model.fitting.R | 2 chicane-0.1.2/chicane/R/stratified.enrichment.sample.R | 1 chicane-0.1.2/chicane/build/vignette.rds |binary chicane-0.1.2/chicane/inst/doc/Introduction.R | 16 chicane-0.1.2/chicane/inst/doc/Introduction.Rmd | 8 chicane-0.1.2/chicane/inst/doc/Introduction.html | 556 ++++++--- chicane-0.1.2/chicane/inst/doc/Visualising_Interactions.R | 8 chicane-0.1.2/chicane/inst/doc/Visualising_Interactions.Rmd | 2 chicane-0.1.2/chicane/inst/doc/Visualising_Interactions.html | 594 ++++++---- chicane-0.1.2/chicane/inst/extdata/T47D_2q35_filtered_chicane_calls.txt |only chicane-0.1.2/chicane/man/bre80.Rd | 6 chicane-0.1.2/chicane/man/chicane.Rd | 36 chicane-0.1.2/chicane/man/compare.replicates.Rd |only chicane-0.1.2/chicane/man/convert.bam.Rd | 3 chicane-0.1.2/chicane/man/convert.standard.format.Rd |only chicane-0.1.2/chicane/man/convert.to.one.based.Rd |only chicane-0.1.2/chicane/man/create.locus.plot.Rd |only chicane-0.1.2/chicane/man/create.modelfit.plot.Rd |only chicane-0.1.2/chicane/man/distance.split.Rd | 8 chicane-0.1.2/chicane/man/filter.fragments.Rd | 8 chicane-0.1.2/chicane/man/fit.glm.Rd | 14 chicane-0.1.2/chicane/man/fit.model.Rd | 22 chicane-0.1.2/chicane/man/get.components.Rd |only chicane-0.1.2/chicane/man/get.interaction.id.Rd |only chicane-0.1.2/chicane/man/model.try.catch.Rd | 14 chicane-0.1.2/chicane/man/prepare.data.Rd | 14 chicane-0.1.2/chicane/man/run.model.fitting.Rd | 17 chicane-0.1.2/chicane/man/test.enrichment.Rd | 11 chicane-0.1.2/chicane/vignettes/Introduction.Rmd | 8 chicane-0.1.2/chicane/vignettes/Visualising_Interactions.Rmd | 2 48 files changed, 998 insertions(+), 510 deletions(-)
Title: Create R Markdown from Lists
Description: Programmatically create R Markdown documents from lists.
Author: Michael J. Kane [aut, cph, cre]
(<https://orcid.org/0000-0003-1899-6662>)
Maintainer: Michael J. Kane <michael.kane@yale.edu>
Diff between listdown versions 0.2.20 dated 2020-07-15 and 0.2.21 dated 2020-07-27
listdown-0.2.20/listdown/tests/testthat/comp-comp.rds |only listdown-0.2.21/listdown/DESCRIPTION | 6 listdown-0.2.21/listdown/MD5 | 51 - listdown-0.2.21/listdown/NEWS.md | 4 listdown-0.2.21/listdown/R/depth-first-pres-list-visitor.r | 2 listdown-0.2.21/listdown/inst/doc/listdown.html | 2 listdown-0.2.21/listdown/inst/doc/listdown.rmd | 2 listdown-0.2.21/listdown/inst/jss/pre-review-response.md | 2 listdown-0.2.21/listdown/inst/jss/supplemental-material/listdown-jss.log | 266 +++++----- listdown-0.2.21/listdown/inst/jss/supplemental-material/listdown-jss.pdf |binary listdown-0.2.21/listdown/inst/jss/supplemental-material/listdown-jss.rmd | 2 listdown-0.2.21/listdown/inst/jss/supplemental-material/listdown-jss.tex | 48 - listdown-0.2.21/listdown/inst/jss/supplemental-material/trial-report.html | 30 - listdown-0.2.21/listdown/tests/testthat/reference-data/as-yml.rds |binary listdown-0.2.21/listdown/tests/testthat/reference-data/cc-dendro.rds |binary listdown-0.2.21/listdown/tests/testthat/reference-data/chunk-decorator-option-1.rds |binary listdown-0.2.21/listdown/tests/testthat/reference-data/chunk-option-1.rds |binary listdown-0.2.21/listdown/tests/testthat/reference-data/chunk-option-2.rds |binary listdown-0.2.21/listdown/tests/testthat/reference-data/chunk-option-3.rds |binary listdown-0.2.21/listdown/tests/testthat/reference-data/chunk-option-4.rds |binary listdown-0.2.21/listdown/tests/testthat/reference-data/ld-cc-list-2-output.rds |only listdown-0.2.21/listdown/tests/testthat/reference-data/test-make-chunks-1.rds |binary listdown-0.2.21/listdown/tests/testthat/reference-data/test-make-chunks-2.rds |binary listdown-0.2.21/listdown/tests/testthat/reference-data/test-rmarkdown-header.rds |binary listdown-0.2.21/listdown/tests/testthat/reference-data/test-workflowr-header.rds |binary listdown-0.2.21/listdown/tests/testthat/reference-data/test_list.rds |binary listdown-0.2.21/listdown/tests/testthat/test-list.r |only listdown-0.2.21/listdown/vignettes/listdown.rmd | 2 28 files changed, 200 insertions(+), 217 deletions(-)
Title: Tools Inspired by 'Stata' to Manipulate Tabular Data
Description: A set of tools inspired by 'Stata' to explore data.frames ('summarize',
'tabulate', 'xtile', 'pctile', 'binscatter', elapsed quarters/month, lead/lag).
Author: Matthieu Gomez [aut, cre]
Maintainer: Matthieu Gomez <mg3901@columbia.edu>
Diff between statar versions 0.7.1 dated 2019-07-05 and 0.7.2 dated 2020-07-27
statar-0.7.1/statar/R/spread_.R |only statar-0.7.2/statar/DESCRIPTION | 10 +-- statar-0.7.2/statar/MD5 | 43 +++++++------- statar-0.7.2/statar/NAMESPACE | 89 ------------------------------ statar-0.7.2/statar/R/fill_gap.R | 22 +++---- statar-0.7.2/statar/R/is.panel.R | 5 - statar-0.7.2/statar/R/join.R | 10 +-- statar-0.7.2/statar/R/n_narm.R | 2 statar-0.7.2/statar/R/pctile.R | 2 statar-0.7.2/statar/R/statar.R | 94 +------------------------------- statar-0.7.2/statar/R/statascii.R | 4 - statar-0.7.2/statar/R/sum_up.R | 35 +++++------ statar-0.7.2/statar/R/tab.R | 12 ++-- statar-0.7.2/statar/R/tlead-tlag.R | 4 - statar-0.7.2/statar/R/winsorize.R | 4 - statar-0.7.2/statar/man/fill_gap.Rd | 11 ++- statar-0.7.2/statar/man/is.panel.Rd | 4 - statar-0.7.2/statar/man/join.Rd | 15 ++++- statar-0.7.2/statar/man/stat_binmean.Rd | 26 +++++--- statar-0.7.2/statar/man/statar.Rd | 1 statar-0.7.2/statar/man/sum_up.Rd | 2 statar-0.7.2/statar/man/tempname.Rd | 3 - statar-0.7.2/statar/man/winsorize.Rd | 18 ++++-- 23 files changed, 133 insertions(+), 283 deletions(-)
Title: Indices of Effect Size and Standardized Parameters
Description: Provide utilities to work with indices of effect size and standardized parameters for a wide variety of models (see support list of insight; Lüdecke, Waggoner & Makowski (2019) <doi:10.21105/joss.01412>), allowing computation and conversion of indices such as Cohen's d, r, odds, etc.
Author: Mattan S. Ben-Shachar [aut, cre]
(<https://orcid.org/0000-0002-4287-4801>),
Dominique Makowski [aut] (<https://orcid.org/0000-0001-5375-9967>),
Daniel Lüdecke [aut] (<https://orcid.org/0000-0002-8895-3206>),
Ken Kelley [ctb],
David Stanley [ctb]
Maintainer: Mattan S. Ben-Shachar <matanshm@post.bgu.ac.il>
Diff between effectsize versions 0.3.1 dated 2020-05-19 and 0.3.2 dated 2020-07-27
effectsize-0.3.1/effectsize/tests/testthat/test-ANOVA_ES.R |only effectsize-0.3.1/effectsize/tests/testthat/test_standardized_differences.R |only effectsize-0.3.2/effectsize/DESCRIPTION | 18 effectsize-0.3.2/effectsize/MD5 | 186 ++++--- effectsize-0.3.2/effectsize/NAMESPACE | 11 effectsize-0.3.2/effectsize/NEWS.md | 20 effectsize-0.3.2/effectsize/R/adjust.R | 39 - effectsize-0.3.2/effectsize/R/change_scale.R | 6 effectsize-0.3.2/effectsize/R/cohens_d.R | 40 - effectsize-0.3.2/effectsize/R/convert_chisq.R | 17 effectsize-0.3.2/effectsize/R/convert_d_to_r.R | 20 effectsize-0.3.2/effectsize/R/convert_odds_to_d.R | 31 + effectsize-0.3.2/effectsize/R/convert_tF_to_pve.R | 35 - effectsize-0.3.2/effectsize/R/convert_tFz_to_r.R | 28 - effectsize-0.3.2/effectsize/R/effectsize.R | 36 + effectsize-0.3.2/effectsize/R/equivalence_test.R | 52 -- effectsize-0.3.2/effectsize/R/eta_squared.R | 208 ++++---- effectsize-0.3.2/effectsize/R/eta_squared_posterior.R |only effectsize-0.3.2/effectsize/R/format_standardize.R | 2 effectsize-0.3.2/effectsize/R/interpret.R | 9 effectsize-0.3.2/effectsize/R/interpret_bayesian_indices.R | 18 effectsize-0.3.2/effectsize/R/interpret_bf.R | 12 effectsize-0.3.2/effectsize/R/interpret_d.R | 16 effectsize-0.3.2/effectsize/R/interpret_fit.R | 56 +- effectsize-0.3.2/effectsize/R/interpret_odds.R | 12 effectsize-0.3.2/effectsize/R/interpret_omega_squared.R | 7 effectsize-0.3.2/effectsize/R/interpret_p.R | 3 effectsize-0.3.2/effectsize/R/interpret_parameters.R | 9 effectsize-0.3.2/effectsize/R/interpret_r.R | 15 effectsize-0.3.2/effectsize/R/interpret_r2.R | 14 effectsize-0.3.2/effectsize/R/normalize.R | 15 effectsize-0.3.2/effectsize/R/phi_cramers_v.R | 39 + effectsize-0.3.2/effectsize/R/ranktransform.R | 12 effectsize-0.3.2/effectsize/R/sd_pooled.R | 3 effectsize-0.3.2/effectsize/R/standardize.R | 31 - effectsize-0.3.2/effectsize/R/standardize.data.frame.R | 6 effectsize-0.3.2/effectsize/R/standardize_parameters.R | 34 - effectsize-0.3.2/effectsize/README.md | 17 effectsize-0.3.2/effectsize/build/partial.rdb |binary effectsize-0.3.2/effectsize/build/vignette.rds |binary effectsize-0.3.2/effectsize/inst/doc/convert.R | 5 effectsize-0.3.2/effectsize/inst/doc/convert.Rmd | 5 effectsize-0.3.2/effectsize/inst/doc/convert.html | 6 effectsize-0.3.2/effectsize/inst/doc/from_test_statistics.R | 18 effectsize-0.3.2/effectsize/inst/doc/from_test_statistics.Rmd | 19 effectsize-0.3.2/effectsize/inst/doc/from_test_statistics.html | 120 ++-- effectsize-0.3.2/effectsize/inst/doc/interpret.R | 5 effectsize-0.3.2/effectsize/inst/doc/interpret.Rmd | 5 effectsize-0.3.2/effectsize/inst/doc/interpret.html | 36 - effectsize-0.3.2/effectsize/inst/doc/logistic.R |only effectsize-0.3.2/effectsize/inst/doc/logistic.Rmd |only effectsize-0.3.2/effectsize/inst/doc/logistic.html |only effectsize-0.3.2/effectsize/inst/doc/standardize_data.R | 20 effectsize-0.3.2/effectsize/inst/doc/standardize_data.Rmd | 20 effectsize-0.3.2/effectsize/inst/doc/standardize_data.html | 208 ++++---- effectsize-0.3.2/effectsize/inst/doc/standardize_parameters.R | 5 effectsize-0.3.2/effectsize/inst/doc/standardize_parameters.Rmd | 5 effectsize-0.3.2/effectsize/inst/doc/standardize_parameters.html | 66 +- effectsize-0.3.2/effectsize/man/F_to_eta2.Rd | 16 effectsize-0.3.2/effectsize/man/adjust.Rd | 96 +-- effectsize-0.3.2/effectsize/man/change_scale.Rd | 3 effectsize-0.3.2/effectsize/man/chisq_to_phi.Rd | 6 effectsize-0.3.2/effectsize/man/cohens_d.Rd | 18 effectsize-0.3.2/effectsize/man/d_to_r.Rd | 244 +++++----- effectsize-0.3.2/effectsize/man/effectsize.Rd | 79 +-- effectsize-0.3.2/effectsize/man/equivalence_test.effectsize_table.Rd | 50 +- effectsize-0.3.2/effectsize/man/eta_squared.Rd | 50 +- effectsize-0.3.2/effectsize/man/eta_squared_posterior.Rd |only effectsize-0.3.2/effectsize/man/format_standardize.Rd | 60 +- effectsize-0.3.2/effectsize/man/interpret.Rd | 4 effectsize-0.3.2/effectsize/man/interpret_bf.Rd | 11 effectsize-0.3.2/effectsize/man/interpret_d.Rd | 11 effectsize-0.3.2/effectsize/man/interpret_ess.Rd | 21 effectsize-0.3.2/effectsize/man/interpret_gfi.Rd | 38 - effectsize-0.3.2/effectsize/man/interpret_odds.Rd | 9 effectsize-0.3.2/effectsize/man/interpret_omega_squared.Rd | 5 effectsize-0.3.2/effectsize/man/interpret_p.Rd | 3 effectsize-0.3.2/effectsize/man/interpret_parameters.Rd | 6 effectsize-0.3.2/effectsize/man/interpret_r.Rd | 11 effectsize-0.3.2/effectsize/man/interpret_r2.Rd | 11 effectsize-0.3.2/effectsize/man/normalize.Rd | 9 effectsize-0.3.2/effectsize/man/phi.Rd | 4 effectsize-0.3.2/effectsize/man/ranktransform.Rd | 7 effectsize-0.3.2/effectsize/man/rules.Rd | 1 effectsize-0.3.2/effectsize/man/sd_pooled.Rd | 7 effectsize-0.3.2/effectsize/man/standardize.Rd | 6 effectsize-0.3.2/effectsize/man/standardize_parameters.Rd | 15 effectsize-0.3.2/effectsize/man/t_to_r.Rd | 13 effectsize-0.3.2/effectsize/tests/testthat/test-cramers_v_etc.R |only effectsize-0.3.2/effectsize/tests/testthat/test-effectsize.htest.R |only effectsize-0.3.2/effectsize/tests/testthat/test-eta_squared_etc.R |only effectsize-0.3.2/effectsize/tests/testthat/test-eta_squared_posterior.R |only effectsize-0.3.2/effectsize/tests/testthat/test-ranktransform.R |only effectsize-0.3.2/effectsize/tests/testthat/test-standardize_parameters.R | 8 effectsize-0.3.2/effectsize/tests/testthat/test-standardized_differences.R |only effectsize-0.3.2/effectsize/vignettes/convert.Rmd | 5 effectsize-0.3.2/effectsize/vignettes/from_test_statistics.Rmd | 19 effectsize-0.3.2/effectsize/vignettes/interpret.Rmd | 5 effectsize-0.3.2/effectsize/vignettes/logistic.Rmd |only effectsize-0.3.2/effectsize/vignettes/standardize_data.Rmd | 20 effectsize-0.3.2/effectsize/vignettes/standardize_parameters.Rmd | 5 101 files changed, 1351 insertions(+), 1145 deletions(-)
Title: Data Operator
Description: Flexibly convert data between long and wide format using just two
functions: reshape_toLong() and reshape_toWide().
Author: Jing Zhang, Zhi Jin
Maintainer: Jing Zhang<zj391120@163.com>
Diff between do versions 1.3.0.0 dated 2020-06-30 and 1.4.0.0 dated 2020-07-27
DESCRIPTION | 8 +-- MD5 | 28 ++++++++++-- NAMESPACE | 94 ++++++++++++++++++++++++------------------- R/NAcount.R |only R/dump.it.R |only R/model.data.R |only R/nms.R |only build/vignette.rds |binary inst/doc/version-update.Rmd | 6 ++ inst/doc/version-update.html | 35 +++++++++++----- man/NA.col.prob.Rd |only man/NA.col.sums.Rd |only man/NA.row.prob.Rd |only man/NA.row.sums.Rd |only man/NA.whole.prob.Rd |only man/NA.whole.sums.Rd |only man/character.nms.Rd |only man/dump.it.Rd |only man/factor.nms.Rd |only man/model.data.Rd |only man/name.n.Rd |only man/numeric.nms.Rd |only vignettes/version-update.Rmd | 6 ++ 23 files changed, 117 insertions(+), 60 deletions(-)
Title: Radial Velocity Method for Detecting Exoplanets
Description: Has various functions designed to implement the
Hermite-Gaussian Radial Velocity (HGRV) estimation approach of
Holzer et al. (2020) <arXiv:2005.14083>, which is a particular application of the radial
velocity method for detecting exoplanets. The overall approach consists
of four sequential steps, each of which has a function in this package:
(1) estimate the template spectrum with the function estimate_template(),
(2) find absorption features in the estimated template with the function
findabsorptionfeatures(), (3) fit Gaussians to the absorption features
with the function Gaussfit(), (4) apply the HGRV with simple linear
regression by calling the function hgrv(). This package is meant to be
open source. But please cite the paper Holzer et al. (2020) <arXiv:2005.14083> when
publishing results that use this package.
Author: Parker Holzer
Maintainer: Parker Holzer <parker.holzer@yale.edu>
Diff between rvmethod versions 0.1.0 dated 2020-06-04 and 0.1.1 dated 2020-07-27
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS.md | 4 +++- R/gaussfit.R | 5 +++-- 4 files changed, 12 insertions(+), 9 deletions(-)
Title: Binned Data Analysis
Description: Algorithms developed for binned data analysis,
gene expression data analysis and
measurement error models for ordinal data analysis.
Author: Bin Wang <bwang831@gmail.com>
Maintainer: Bin Wang <bwang831@gmail.com>
Diff between bda versions 14.3.19 dated 2020-03-30 and 15.0.2 dated 2020-07-27
bda-14.3.19/bda/man/ofc.Rd |only bda-15.0.2/bda/DESCRIPTION | 8 - bda-15.0.2/bda/MD5 | 34 +++- bda-15.0.2/bda/NAMESPACE | 4 bda-15.0.2/bda/R/fitFSD.R | 184 ++++++++++++++++++++++++++ bda-15.0.2/bda/R/lpsmooth.R | 194 ++++++++++++++++++++++++---- bda-15.0.2/bda/R/vas.R | 280 ++++++++++++++++++++++++++++++++++++++--- bda-15.0.2/bda/R/wkde.R |only bda-15.0.2/bda/R/zzz.R | 2 bda-15.0.2/bda/data/Pain.RData |only bda-15.0.2/bda/data/datalist | 3 bda-15.0.2/bda/man/VAS.Rd | 6 bda-15.0.2/bda/man/dataOFC.Rd |only bda-15.0.2/bda/man/dataPain.Rd |only bda-15.0.2/bda/man/lpsmooth.Rd | 5 bda-15.0.2/bda/man/wkde.Rd |only bda-15.0.2/bda/src/binning.f | 48 +++++++ bda-15.0.2/bda/src/cKDE.c |only bda-15.0.2/bda/src/init.c | 52 +++++++ bda-15.0.2/bda/src/lpsmooth.c | 2 bda-15.0.2/bda/src/npr.c |only bda-15.0.2/bda/src/wkde.c |only bda-15.0.2/bda/src/wnpr.c |only 23 files changed, 754 insertions(+), 68 deletions(-)
Title: Accesses Air Quality Data from the Open Data Platform OpenAQ
Description: Allows access to air quality data from the API of
the OpenAQ platform <https://docs.openaq.org/>, with the different
services the API offers (getting measurements for a given query,
getting latest measurements, getting lists of available
countries/cities/locations).
Author: Maëlle Salmon [aut, cre],
Andrew MacDonald [rev] (Andrew MacDonald reviewed the package for
rOpenSci, see
https://github.com/ropensci/software-review/issues/24),
Andy Teucher [rev] (Andy Teucher reviewed the package for rOpenSci, see
https://github.com/ropensci/software-review/issues/24),
Mikayla Murphy [ctb]
Maintainer: Maëlle Salmon <maelle.salmon@yahoo.se>
Diff between ropenaq versions 0.2.9 dated 2020-03-26 and 0.2.10 dated 2020-07-27
DESCRIPTION | 12 +-- MD5 | 16 ++-- NEWS.md | 8 ++ R/measurements.R | 30 ++++--- R/utils.R | 109 ++++++++++++++++------------- tests/fixtures/aq_measurements_Chennai.yml | 64 ++++++++--------- tests/fixtures/status.yml |only tests/testthat/test-aq_measurements.R | 48 ++++++------ tests/testthat/test-buildQueries.R | 1 tests/testthat/test-test-get_status.R |only 10 files changed, 160 insertions(+), 128 deletions(-)
Title: Compute Scores for Different Implicit Measures
Description: A tool for computing the scores for the Implicit Association Test
(IAT; Greenwald, McGhee & Schwartz (1998) <doi:10.1037/0022-3514.74.6.1464>)
and the Single Category-IAT (SC-IAT: Karpinski & Steinman
(2006) <doi:10.1037/0022-3514.91.1.16>). Functions for preparing the data
(both for the IAT and the SC-IAT), plotting the results, and obtaining a
table with the scores of implicit measures descriptive statistics are
provided.
Author: Ottavia M. Epifania [aut, cre],
Pasquale Anselmi [ctb],
Egidio Robusto [ctb]
Maintainer: Ottavia M. Epifania <otta.epifania@gmail.com>
Diff between implicitMeasures versions 0.1.3 dated 2020-05-28 and 0.2.0 dated 2020-07-27
implicitMeasures-0.1.3/implicitMeasures/R/Dsciat.R |only implicitMeasures-0.1.3/implicitMeasures/R/IATrel.R |only implicitMeasures-0.1.3/implicitMeasures/R/computeD.R |only implicitMeasures-0.1.3/implicitMeasures/R/d_distr.R |only implicitMeasures-0.1.3/implicitMeasures/R/d_plot.R |only implicitMeasures-0.1.3/implicitMeasures/inst/joss |only implicitMeasures-0.1.3/implicitMeasures/man/Dsciat.Rd |only implicitMeasures-0.1.3/implicitMeasures/man/IATrel.Rd |only implicitMeasures-0.1.3/implicitMeasures/man/computeD.Rd |only implicitMeasures-0.1.3/implicitMeasures/man/d_distr.Rd |only implicitMeasures-0.1.3/implicitMeasures/man/d_plot.Rd |only implicitMeasures-0.1.3/implicitMeasures/tests/testthat/test-Dsciat.R |only implicitMeasures-0.1.3/implicitMeasures/tests/testthat/test-IATrel_descript_d.R |only implicitMeasures-0.1.3/implicitMeasures/tests/testthat/test-computeD.R |only implicitMeasures-0.1.3/implicitMeasures/tests/testthat/test-d_distr_d_plot.R |only implicitMeasures-0.2.0/implicitMeasures/DESCRIPTION | 10 - implicitMeasures-0.2.0/implicitMeasures/LICENSE | 2 implicitMeasures-0.2.0/implicitMeasures/MD5 | 100 +++++----- implicitMeasures-0.2.0/implicitMeasures/NAMESPACE | 12 - implicitMeasures-0.2.0/implicitMeasures/NEWS.md | 7 implicitMeasures-0.2.0/implicitMeasures/R/IAT_rel.R |only implicitMeasures-0.2.0/implicitMeasures/R/compute_iat.R |only implicitMeasures-0.2.0/implicitMeasures/R/compute_sciat.R |only implicitMeasures-0.2.0/implicitMeasures/R/d_density.R |only implicitMeasures-0.2.0/implicitMeasures/R/d_point.R |only implicitMeasures-0.2.0/implicitMeasures/R/descript_d.R | 4 implicitMeasures-0.2.0/implicitMeasures/R/dsciat1.R |only implicitMeasures-0.2.0/implicitMeasures/R/dsciat2.R |only implicitMeasures-0.2.0/implicitMeasures/R/iatdscores.R |only implicitMeasures-0.2.0/implicitMeasures/R/multi_dsciat.R | 44 ++-- implicitMeasures-0.2.0/implicitMeasures/R/multi_dscore.R | 12 - implicitMeasures-0.2.0/implicitMeasures/README.md | 54 +++-- implicitMeasures-0.2.0/implicitMeasures/build/vignette.rds |binary implicitMeasures-0.2.0/implicitMeasures/data/dsciat1.rda |only implicitMeasures-0.2.0/implicitMeasures/data/dsciat2.rda |only implicitMeasures-0.2.0/implicitMeasures/data/iatdscores.rda |only implicitMeasures-0.2.0/implicitMeasures/inst/doc/IAT-example.R | 20 +- implicitMeasures-0.2.0/implicitMeasures/inst/doc/IAT-example.Rmd | 52 ++--- implicitMeasures-0.2.0/implicitMeasures/inst/doc/IAT-example.html | 92 +++++---- implicitMeasures-0.2.0/implicitMeasures/inst/doc/SC-IAT-example.R | 21 +- implicitMeasures-0.2.0/implicitMeasures/inst/doc/SC-IAT-example.Rmd | 46 ++-- implicitMeasures-0.2.0/implicitMeasures/inst/doc/SC-IAT-example.html | 92 +++++---- implicitMeasures-0.2.0/implicitMeasures/inst/doc/implicitMeasures.R | 2 implicitMeasures-0.2.0/implicitMeasures/inst/doc/implicitMeasures.Rmd | 14 - implicitMeasures-0.2.0/implicitMeasures/inst/doc/implicitMeasures.html | 46 +++- implicitMeasures-0.2.0/implicitMeasures/inst/paper.Rmd |only implicitMeasures-0.2.0/implicitMeasures/inst/paper.bib | 23 +- implicitMeasures-0.2.0/implicitMeasures/inst/paper.md |only implicitMeasures-0.2.0/implicitMeasures/man/IAT_rel.Rd |only implicitMeasures-0.2.0/implicitMeasures/man/compute_iat.Rd |only implicitMeasures-0.2.0/implicitMeasures/man/compute_sciat.Rd |only implicitMeasures-0.2.0/implicitMeasures/man/d_density.Rd |only implicitMeasures-0.2.0/implicitMeasures/man/d_point.Rd |only implicitMeasures-0.2.0/implicitMeasures/man/descript_d.Rd | 4 implicitMeasures-0.2.0/implicitMeasures/man/dsciat1.Rd |only implicitMeasures-0.2.0/implicitMeasures/man/dsciat2.Rd |only implicitMeasures-0.2.0/implicitMeasures/man/figures/README-unnamed-chunk-2-1.png |binary implicitMeasures-0.2.0/implicitMeasures/man/iatdscores.Rd |only implicitMeasures-0.2.0/implicitMeasures/man/multi_dsciat.Rd | 4 implicitMeasures-0.2.0/implicitMeasures/man/raw_data.Rd | 6 implicitMeasures-0.2.0/implicitMeasures/tests/testthat/test-IAT_rel_descript_d.R |only implicitMeasures-0.2.0/implicitMeasures/tests/testthat/test-compute_iat-replicate.R |only implicitMeasures-0.2.0/implicitMeasures/tests/testthat/test-compute_iat.R |only implicitMeasures-0.2.0/implicitMeasures/tests/testthat/test-compute_sciat-replicate.R |only implicitMeasures-0.2.0/implicitMeasures/tests/testthat/test-compute_sciat.R |only implicitMeasures-0.2.0/implicitMeasures/tests/testthat/test-d_density_d_plot.R |only implicitMeasures-0.2.0/implicitMeasures/tests/testthat/test-multi_dscore_multi_dsciat.R | 8 implicitMeasures-0.2.0/implicitMeasures/vignettes/IAT-example.Rmd | 52 ++--- implicitMeasures-0.2.0/implicitMeasures/vignettes/SC-IAT-example.Rmd | 46 ++-- implicitMeasures-0.2.0/implicitMeasures/vignettes/implicitMeasures.Rmd | 14 - 70 files changed, 446 insertions(+), 341 deletions(-)
More information about implicitMeasures at CRAN
Permanent link
Title: User Interface for Collecting and Analysing Social Networks
Description: A 'Shiny' application for the interactive visualisation and
analysis of networks that also provides a web interface for collecting
social media data using 'vosonSML'.
Author: Bryan Gertzel, Robert Ackland
Maintainer: Bryan Gertzel <bryan.gertzel@anu.edu.au>
Diff between VOSONDash versions 0.5.4 dated 2020-05-20 and 0.5.7 dated 2020-07-27
VOSONDash-0.5.4/VOSONDash/man/loadDemoGraph.Rd |only VOSONDash-0.5.7/VOSONDash/DESCRIPTION | 18 VOSONDash-0.5.7/VOSONDash/MD5 | 68 - VOSONDash-0.5.7/VOSONDash/NAMESPACE | 21 VOSONDash-0.5.7/VOSONDash/NEWS.md | 29 VOSONDash-0.5.7/VOSONDash/R/VOSONDash-package.R | 9 VOSONDash-0.5.7/VOSONDash/R/assortativity.R | 2 VOSONDash-0.5.7/VOSONDash/R/networkGraphs.R | 53 + VOSONDash-0.5.7/VOSONDash/R/textAnalysis.R | 376 +++++++--- VOSONDash-0.5.7/VOSONDash/R/utils.R | 18 VOSONDash-0.5.7/VOSONDash/README.md | 16 VOSONDash-0.5.7/VOSONDash/inst/vosondash/global.R | 13 VOSONDash-0.5.7/VOSONDash/inst/vosondash/modules/textAnalysisModule.R | 48 + VOSONDash-0.5.7/VOSONDash/inst/vosondash/packages.R | 12 VOSONDash-0.5.7/VOSONDash/inst/vosondash/server.R | 6 VOSONDash-0.5.7/VOSONDash/inst/vosondash/server/igraphPlot.R | 11 VOSONDash-0.5.7/VOSONDash/inst/vosondash/server/networkGraphsServer.R | 63 + VOSONDash-0.5.7/VOSONDash/inst/vosondash/server/redditServer.R | 6 VOSONDash-0.5.7/VOSONDash/inst/vosondash/server/textAnalysisServer.R | 233 ++---- VOSONDash-0.5.7/VOSONDash/inst/vosondash/server/twitterServer.R | 7 VOSONDash-0.5.7/VOSONDash/inst/vosondash/server/visnetworkPlot.R | 44 - VOSONDash-0.5.7/VOSONDash/inst/vosondash/server/youtubeServer.R | 6 VOSONDash-0.5.7/VOSONDash/inst/vosondash/ui/networkGraphsUI.R | 12 VOSONDash-0.5.7/VOSONDash/inst/vosondash/ui/textAnalysisUI.R | 29 VOSONDash-0.5.7/VOSONDash/man/applyCategoricalFilters.Rd | 2 VOSONDash-0.5.7/VOSONDash/man/corpusFromGraph.Rd |only VOSONDash-0.5.7/VOSONDash/man/dtbGraph.Rd |only VOSONDash-0.5.7/VOSONDash/man/eawGraph.Rd |only VOSONDash-0.5.7/VOSONDash/man/emptyPlotMessage.Rd | 4 VOSONDash-0.5.7/VOSONDash/man/getSystemFontFamilies.Rd |only VOSONDash-0.5.7/VOSONDash/man/getVertexCategories.Rd | 2 VOSONDash-0.5.7/VOSONDash/man/loadPackageGraph.Rd |only VOSONDash-0.5.7/VOSONDash/man/mixmat.Rd | 2 VOSONDash-0.5.7/VOSONDash/man/wordCloudPlot.Rd | 29 VOSONDash-0.5.7/VOSONDash/man/wordFreqChart.Rd | 16 VOSONDash-0.5.7/VOSONDash/man/wordFreqFromCorpus.Rd |only VOSONDash-0.5.7/VOSONDash/man/wordSentChart.Rd | 48 - VOSONDash-0.5.7/VOSONDash/man/wordSentData.Rd |only VOSONDash-0.5.7/VOSONDash/man/wordSentValenceChart.Rd | 39 - 39 files changed, 830 insertions(+), 412 deletions(-)
More information about image.LineSegmentDetector at CRAN
Permanent link
More information about image.libfacedetection at CRAN
Permanent link
More information about image.CornerDetectionHarris at CRAN
Permanent link
More information about image.CornerDetectionF9 at CRAN
Permanent link
More information about image.ContourDetector at CRAN
Permanent link
More information about image.binarization at CRAN
Permanent link
Title: Create Tidy Data Frames of Marginal Effects for 'ggplot' from
Model Outputs
Description: Compute marginal effects from statistical models and returns the
result as tidy data frames. These data frames are ready to use with the
'ggplot2'-package. Marginal effects can be calculated for many different
models. Interaction terms, splines and polynomial terms are also supported.
The main functions are ggpredict(), ggemmeans() and ggeffect(). There is a
generic plot()-method to plot the results using 'ggplot2'.
Author: Daniel Lüdecke [aut, cre] (<https://orcid.org/0000-0002-8895-3206>),
Frederik Aust [ctb] (<https://orcid.org/0000-0003-4900-788X>),
Sam Crawley [ctb] (<https://orcid.org/0000-0002-7847-0411>)
Maintainer: Daniel Lüdecke <d.luedecke@uke.de>
Diff between ggeffects versions 0.15.0 dated 2020-06-16 and 0.15.1 dated 2020-07-27
DESCRIPTION | 14 MD5 | 76 +- NEWS.md | 12 R/efc.R | 13 R/get_predictions_glmmTMB.R | 4 R/get_predictions_mclogit.R |only R/get_predictions_stan.R | 21 R/ggeffect.R | 22 R/ggemmeans.R | 6 R/ggpredict.R | 40 - R/predictions.R | 2 R/utils_get_cleaned_terms.R | 5 R/utils_model_function.R | 3 build/partial.rdb |binary build/vignette.rds |binary inst/doc/ggeffects.Rmd | 2 inst/doc/ggeffects.html | 832 +++++++++++------------ inst/doc/introduction_effectsatvalues.html | 504 +++++++------ inst/doc/introduction_plotcustomize.html | 132 ++- inst/doc/introduction_plotmethod.html | 208 +++-- inst/doc/introduction_randomeffects.R | 20 inst/doc/introduction_randomeffects.Rmd | 46 - inst/doc/introduction_randomeffects.html | 488 +++++++------ inst/doc/practical_logisticmixedmodel.html | 250 +++--- inst/doc/practical_robustestimation.html | 230 +++--- inst/doc/technical_differencepredictemmeans.html | 310 ++++---- inst/doc/technical_stata.html | 102 +- man/efc.Rd | 13 man/ggpredict.Rd | 38 - tests/testthat/test-MixMod.R | 10 tests/testthat/test-brms-categ-cum.R |only tests/testthat/test-brms-ppd.R | 3 tests/testthat/test-brms-trial.R | 2 tests/testthat/test-glmmTMB.R | 2 tests/testthat/test-rstanarm-ppd.R | 4 tests/testthat/test-rstanarm.R | 4 tests/testthat/test-zeroinfl.R | 4 tests/testthat/test-zi_prob.R | 7 vignettes/ggeffects.Rmd | 2 vignettes/introduction_randomeffects.Rmd | 46 - 40 files changed, 1888 insertions(+), 1589 deletions(-)
More information about utilityFunctionTools at CRAN
Permanent link
Title: R Interface to Stan
Description: User-facing R functions are provided to parse, compile, test,
estimate, and analyze Stan models by accessing the header-only Stan library
provided by the 'StanHeaders' package. The Stan project develops a probabilistic
programming language that implements full Bayesian statistical inference
via Markov Chain Monte Carlo, rough Bayesian inference via 'variational'
approximation, and (optionally penalized) maximum likelihood estimation via
optimization. In all three cases, automatic differentiation is used to quickly
and accurately evaluate gradients without burdening the user with the need to
derive the partial derivatives.
Author: Jiqiang Guo [aut],
Jonah Gabry [aut],
Ben Goodrich [cre, aut],
Sebastian Weber [aut],
Daniel Lee [ctb],
Krzysztof Sakrejda [ctb],
Modrak Martin [ctb],
Trustees of Columbia University [cph],
Oleg Sklyar [cph] (R/cxxfunplus.R),
The R Core Team [cph] (R/pairs.R, R/dynGet.R),
Jens Oehlschlaegel-Akiyoshi [cph] (R/pairs.R),
John Maddock [cph] (gamma.hpp),
Paul Bristow [cph] (gamma.hpp),
Nikhar Agrawal [cph] (gamma.hpp),
Christopher Kormanyos [cph] (gamma.hpp),
Bronder Steve [ctb]
Maintainer: Ben Goodrich <benjamin.goodrich@columbia.edu>
Diff between rstan versions 2.21.1 dated 2020-07-08 and 2.21.2 dated 2020-07-27
DESCRIPTION | 17 ++-- MD5 | 34 ++++---- NAMESPACE | 2 R/check_hmc_diagnostics.R | 6 - R/cxxfunplus.R | 11 +- R/expose_stan_functions.R | 11 +- R/makefile_op.R | 81 ++++++++++++++++++++ R/options.R | 2 R/plugin.R | 29 ++++--- R/stanc.R | 34 ++++---- R/stanmodel-class.R | 9 +- R/zzz.R | 11 +- inst/NEWS | 6 + inst/doc/SBC.html | 6 - inst/doc/external.html | 20 ++--- inst/doc/rstan.html | 143 ++++++++++++++++++------------------ inst/doc/stanfit-objects.html | 164 +++++++++++++++++++++--------------------- src/stan_fit.cpp | 2 18 files changed, 344 insertions(+), 244 deletions(-)
Title: Easy Interface to the Statistical Disclosure Control Package
'sdcTable'
Description: The main function, ProtectTable(), performs table suppression according to a
frequency rule with a data set as the only required input. Within this function,
protectTable(), protectLinkedTables() or runArgusBatchFile() in package 'sdcTable' is called.
Lists of level-hierarchy (parameter 'dimList') and other required input to these functions
are created automatically.
The function, PTgui(), starts a graphical user interface based on the shiny package.
Author: Øyvind Langsrud [aut, cre]
Maintainer: Øyvind Langsrud <oyl@ssb.no>
Diff between easySdcTable versions 0.5.0 dated 2020-04-04 and 0.6.0 dated 2020-07-27
DESCRIPTION | 10 MD5 | 36 +- NAMESPACE | 1 NEWS.md | 9 R/ProtectTable.R | 176 +++++++++++- R/ProtectTable1.R | 3 R/PtGui.R | 5 build/vignette.rds |binary inst/doc/easySdcTableVignette.html | 88 +++--- inst/doc/singletonsAndZeros.html | 77 +++-- man/EasyData.Rd | 48 +-- man/IncDefault.Rd | 42 +- man/PTgui.Rd | 178 ++++++------ man/PTwrap.Rd | 138 ++++----- man/ProtectTable.Rd | 534 ++++++++++++++++++------------------- man/ProtectTable1.Rd | 220 +++++++-------- man/ReplaceDimList.Rd | 88 +++--- man/sosialFiktiv.Rd | 40 +- tests/testthat/test-ProtectTable.R | 43 ++ 19 files changed, 986 insertions(+), 750 deletions(-)
Title: Retrieve and Analyze Clinical Trials in Public Registers
Description: Provides functions for querying, retrieving and analysing
protocol- and results-related information on clinical trials from
two public registers, the European Union Clinical Trials Register
(EUCTR, <https://www.clinicaltrialsregister.eu/>) and
ClinicalTrials.gov (CTGOV, <https://clinicaltrials.gov/>). The
information is transformed and then stored in a database (nodbi).
Functions are provided for accessing and analysing the locally
stored information on the clinical trials, as well as for
identifying duplicate records. The package is motivated by the need
for aggregating and trend-analysing the design, conduct and outcomes
across clinical trials.
Author: Ralf Herold [aut, cre] (<https://orcid.org/0000-0002-8148-6748>)
Maintainer: Ralf Herold <ralf.herold@mailbox.org>
Diff between ctrdata versions 1.2.1 dated 2020-05-18 and 1.3.0 dated 2020-07-27
DESCRIPTION | 10 MD5 | 65 ++-- NEWS.md | 14 R/main.R | 260 ++++++++++-------- R/utils.R | 287 +++++++++++++++----- README.md | 55 ++- build/vignette.rds |binary inst/doc/ctrdata_get_started.pdf |binary inst/doc/ctrdata_usage_examples.pdf |binary inst/image/README-ctrdata_results_neuroblastoma.png |binary inst/tinytest/ctrdata_ctgov.R | 34 +- inst/tinytest/ctrdata_euctr.R | 193 ++++++++++--- inst/tinytest/setup_ctrdata.R | 20 - inst/tinytest/test_ctrdata_ctrfindactivesubstance.R | 11 inst/tinytest/test_ctrdata_mongo_local_ctgov.R | 24 - inst/tinytest/test_ctrdata_mongo_local_euctr.R | 24 - inst/tinytest/test_ctrdata_mongo_remote_rw_ctgov.R | 22 - inst/tinytest/test_ctrdata_mongo_remote_rw_euctr.R | 24 - inst/tinytest/test_ctrdata_other_functions.R | 68 ++++ inst/tinytest/test_ctrdata_param_checks.R |only inst/tinytest/test_ctrdata_sqlite_ctgov.R | 21 - inst/tinytest/test_ctrdata_sqlite_euctr.R | 21 - man/ctrFindActiveSubstanceSynonyms.Rd | 4 man/ctrGetQueryUrlFromBrowser.Rd | 20 + man/ctrLoadQueryIntoDb.Rd | 7 man/ctrOpenSearchPagesInBrowser.Rd | 11 man/dbFindFields.Rd | 17 - man/dbFindIdsUniqueTrials.Rd | 8 man/dbGetFieldsIntoDf.Rd | 40 ++ man/dbQueryHistory.Rd | 7 man/dfListExtractKey.Rd | 9 man/dfMergeTwoVariablesRelevel.Rd | 5 man/installCygwinWindowsDoInstall.Rd | 4 tests/tinytest.R | 28 + 34 files changed, 896 insertions(+), 417 deletions(-)
Title: Model Tropical Cyclone Wind Speeds
Description: Allows users to input tracking data for a hurricane
or other tropical storm, along with a data frame of grid points at which
to model wind speeds. Functions in this package will then calculate wind
speeds at each point based on wind model equations. This modeling framework
is currently set up to model winds for North American locations with
Atlantic basin storms. This work was supported
in part by grants from the National Institute of Environmental Health
Sciences (R00ES022631), the National Science Foundation (1331399), and the
Department of Energy (DE-FG02-08ER64644).
Author: Brooke Anderson [aut, cre],
Andrea Schumacher [aut],
Seth Guikema [aut],
Steven Quiring [aut],
Joshua Ferreri [aut],
Andrea Staid [ctb],
Michael Guo [ctb],
Lei Ming [ctb],
Laiyin Zhu [ctb]
Maintainer: Brooke Anderson <brooke.anderson@colostate.edu>
Diff between stormwindmodel versions 0.1.3 dated 2020-04-01 and 0.1.4 dated 2020-07-27
DESCRIPTION | 24 - MD5 | 40 +- NEWS.md | 10 README.md | 68 ++-- build/vignette.rds |binary inst/doc/Details.html | 451 ++++++++++++++++-------------- inst/doc/Overview.R | 3 inst/doc/Overview.Rmd | 3 inst/doc/Overview.html | 213 +++++++------- man/county_points.Rd | 6 man/figures/README-unnamed-chunk-11-1.png |binary man/figures/README-unnamed-chunk-14-1.png |binary man/figures/README-unnamed-chunk-15-1.png |binary man/figures/README-unnamed-chunk-16-1.png |binary man/figures/README-unnamed-chunk-17-1.png |binary man/figures/README-unnamed-chunk-18-1.png |binary man/figures/README-unnamed-chunk-7-1.png |binary man/floyd_tracks.Rd | 6 man/katrina_tracks.Rd | 6 man/landmask.Rd | 6 vignettes/Overview.Rmd | 3 21 files changed, 468 insertions(+), 371 deletions(-)
More information about stormwindmodel at CRAN
Permanent link
Title: Visualisation Toolbox for 'easystats' and Extra Geoms, Themes
and Color Palettes for 'ggplot2'
Description: Provides plotting utilities supporting easystats-packages (<https://github.com/easystats/easystats>)
and some extra themes, geoms, and scales for 'ggplot2'. Color scales are
based on <https://www.materialui.co/colors>.
Author: Daniel Lüdecke [aut, cre] (<https://orcid.org/0000-0002-8895-3206>),
Dominique Makowski [aut, inv] (<https://orcid.org/0000-0001-5375-9967>),
Philip Waggoner [aut, ctb] (<https://orcid.org/0000-0002-7825-7573>),
Mattan S. Ben-Shachar [aut] (<https://orcid.org/0000-0002-4287-4801>)
Maintainer: Daniel Lüdecke <d.luedecke@uke.de>
Diff between see versions 0.5.1 dated 2020-06-13 and 0.5.2 dated 2020-07-27
DESCRIPTION | 8 MD5 | 171 ++++++++------ NAMESPACE | 22 + NEWS.md | 12 + R/data_plot.R | 86 ++----- R/geom_violinhalf.R | 36 +-- R/plot.bayesfactor_models.R | 136 +++++------ R/plot.bayesfactor_parameters.R | 17 + R/plot.check_collinearity.R | 15 + R/plot.check_distribution.R | 18 + R/plot.check_heteroscedasticity.R | 15 + R/plot.check_homogeneity.R | 14 + R/plot.check_normality.R | 18 + R/plot.check_outliers.R | 20 + R/plot.cluster_analysis.R | 18 + R/plot.compare_performance.R | 22 + R/plot.describe_distribution.R | 17 + R/plot.easycormatrix.R | 68 ++++- R/plot.easycorrelation.R | 20 + R/plot.effectsize_table.R | 17 + R/plot.equivalence_test.R | 17 + R/plot.estimate_contrasts.R | 18 + R/plot.estimate_density.R | 29 ++ R/plot.hdi.R | 26 ++ R/plot.n_factors.R | 28 +- R/plot.p_direction.R | 24 +- R/plot.p_significance.R | 22 + R/plot.parameters_model.R | 19 + R/plot.parameters_pca.R | 21 + R/plot.parameters_sem.R | 21 - R/plot.parameters_simulate.R | 19 + R/plot.performance_roc.R | 22 + R/plot.point_estimates.R | 28 ++ R/plot.rope.R | 22 + R/plot.si.R | 24 +- R/print.check_model.R | 12 - R/scale_color_bluebrown.R |only R/scale_color_flat.R | 3 R/scale_color_material.R | 1 R/scale_color_metro.R | 1 R/scale_color_see.R |only R/scale_color_social.R | 1 inst |only man/add_plot_attributes.Rd | 74 +++--- man/bluebrown_colors.Rd |only man/coord_radar.Rd | 68 ++--- man/data_plot.Rd | 363 ++----------------------------- man/dot-es_names.Rd | 32 +- man/flat_colors.Rd | 46 +-- man/geom_point2.Rd | 76 +++--- man/geom_poolpoint.Rd | 112 ++++----- man/geom_violindot.Rd | 180 +++++++-------- man/geom_violinhalf.Rd | 168 +++++++------- man/material_colors.Rd | 46 +-- man/metro_colors.Rd | 46 +-- man/palette_bluebrown.Rd |only man/palette_flat.Rd | 44 +-- man/palette_material.Rd | 44 +-- man/palette_metro.Rd | 44 +-- man/palette_pizza.Rd | 46 +-- man/palette_see.Rd |only man/palette_social.Rd | 44 +-- man/plot.see_bayesfactor_models.Rd |only man/plot.see_bayesfactor_parameters.Rd |only man/plot.see_check_collinearity.Rd |only man/plot.see_check_distribution.Rd |only man/plot.see_check_heteroscedasticity.Rd |only man/plot.see_check_homogeneity.Rd |only man/plot.see_check_normality.Rd |only man/plot.see_check_outliers.Rd |only man/plot.see_cluster_analysis.Rd |only man/plot.see_compare_performance.Rd |only man/plot.see_easycormatrix.Rd |only man/plot.see_easycorrelation.Rd |only man/plot.see_effectsize_table.Rd |only man/plot.see_equivalence_test.Rd |only man/plot.see_estimate_contrasts.Rd |only man/plot.see_estimate_density.Rd |only man/plot.see_hdi.Rd |only man/plot.see_n_factors.Rd |only man/plot.see_p_direction.Rd |only man/plot.see_p_significance.Rd |only man/plot.see_parameters_distribution.Rd |only man/plot.see_parameters_model.Rd |only man/plot.see_parameters_pca.Rd |only man/plot.see_parameters_simulate.Rd |only man/plot.see_performance_roc.Rd |only man/plot.see_point_estimate.Rd |only man/plot.see_rope.Rd |only man/plot.see_si.Rd |only man/plots.Rd | 62 ++--- man/scale_color_bluebrown.Rd |only man/scale_color_flat.Rd | 166 +++++++------- man/scale_color_material.Rd | 222 +++++++++--------- man/scale_color_metro.Rd | 212 +++++++++--------- man/scale_color_pizza.Rd | 204 ++++++++--------- man/scale_color_see.Rd |only man/scale_color_social.Rd | 222 +++++++++--------- man/see_colors.Rd |only man/social_colors.Rd | 46 +-- man/theme_abyss.Rd | 2 man/theme_blackboard.Rd | 2 man/theme_lucid.Rd | 2 man/theme_modern.Rd | 2 man/theme_radar.Rd | 2 105 files changed, 1969 insertions(+), 1716 deletions(-)
Title: Markov Model for Online Multi-Channel Attribution
Description: Advertisers use a variety of online marketing channels to reach consumers and they want to know the degree each channel contributes to their marketing success. This is called online multi-channel attribution problem. This package contains a probabilistic algorithm for the attribution problem. The model uses a k-order Markov representation to identify structural correlations in the customer journey data. The package also contains three heuristic algorithms (first-touch, last-touch and linear-touch approach) for the same problem. The algorithms are implemented in C++.
Author: Davide Altomare, David Loris
Maintainer: Davide Altomare <info@channelattribution.net>
Diff between ChannelAttribution versions 2.0.1 dated 2020-07-14 and 2.0.2 dated 2020-07-27
DESCRIPTION | 14 +++++++------- MD5 | 18 +++++++++--------- R/ChannelAttribution.R | 11 +++++++++-- man/ChannelAttribution-package.Rd | 15 ++++++++------- man/auto_markov_model.Rd | 2 +- man/choose_order.Rd | 2 +- man/heuristic_models.Rd | 2 +- man/markov_model.Rd | 2 +- man/transition_matrix.Rd | 2 +- src/ChannelAttribution.cpp | 2 +- 10 files changed, 39 insertions(+), 31 deletions(-)
More information about ChannelAttribution at CRAN
Permanent link
Title: Models for Non Linear Causality Detection in Time Series
Description: Models for non-linear time series analysis and causality detection. The main functionalities of this package consist of an implementation of the classical causality test (C.W.J.Granger 1980) <doi:10.1016/0165-1889(80)90069-X>, and a non-linear version of it based on feed-forward neural networks. This package contains also an implementation of the Transfer Entropy <doi:10.1103/PhysRevLett.85.461>, and the continuous Transfer Entropy using an approximation based on the k-nearest neighbors <doi:10.1103/PhysRevE.69.066138>. There are also some other useful tools, like the VARNN (Vector Auto-Regressive Neural Network) prediction model, the Augmented test of stationarity, and the discrete and continuous entropy and mutual information.
Author: Youssef Hmamouche [aut, cre]
Maintainer: Youssef Hmamouche <hmamoucheyussef@gmail.com>
Diff between NlinTS versions 1.4.0 dated 2020-07-21 and 1.4.1 dated 2020-07-27
DESCRIPTION | 8 +- MD5 | 34 +++++----- R/modules.R | 2 build/partial.rdb |binary inst/include/dense.h | 10 +-- inst/include/layer.h | 2 inst/include/network.h | 6 - inst/include/nlinCausalityTest.h | 2 inst/include/varnn.h | 5 - inst/include/varnnExport.h | 2 man/varmlp.Rd | 2 src/causalityTest.cpp | 28 +++----- src/dense.cpp | 130 ++++++++++++++++++++++++--------------- src/fdist.cpp | 8 +- src/network.cpp | 50 ++++++++------- src/nlinCausalityTest.cpp | 5 - src/varnn.cpp | 41 +++++++----- src/varnnExport.cpp | 4 - 18 files changed, 193 insertions(+), 146 deletions(-)
Title: Multilevel Mediation Analysis
Description: Do multilevel mediation analysis with generalized additive multilevel models. The analysis method is described in Yu and Li (2020), "Third-Variable Effect Analysis with Multilevel Additive Models", submitted.
Author: Qingzhao Yu, Bin Li
Maintainer: Qingzhao Yu <qyu@lsuhsc.edu>
Diff between mlma versions 5.0-0 dated 2020-05-08 and 5.1-0 dated 2020-07-27
DESCRIPTION | 10 +-- MD5 | 16 ++--- R/mlma.r | 56 ++++++++++------- inst/doc/MLMAvignette.R | 17 ++--- inst/doc/MLMAvignette.Rmd | 40 ++++++------ inst/doc/MLMAvignette.html | 142 ++++++++++++++++++++------------------------- man/plot.mlma.Rd | 2 man/plot.mlma.boot.Rd | 2 vignettes/MLMAvignette.Rmd | 40 ++++++------ 9 files changed, 160 insertions(+), 165 deletions(-)
Title: Reproducible Data Retrieval from the ICPSR Archive
Description: Reproducible, programmatic retrieval of datasets from the
Inter-university Consortium for Political and Social Research archive.
Author: Frederick Solt [aut, cre, cph],
Kellen Gracey [aut],
Eric Persson [ctb],
Joanna Pepin [ctb],
J. Hathaway [ctb],
Jennifer Lin [ctb],
John Bulloch [ctb]
Maintainer: Frederick Solt <frederick-solt@uiowa.edu>
Diff between icpsrdata versions 0.4.0 dated 2019-05-24 and 0.5.0 dated 2020-07-27
DESCRIPTION | 23 +++++++----- MD5 | 20 +++++----- NEWS.md | 3 + R/icpsrdownload.R | 11 +++-- README.md | 13 ++++-- build/vignette.rds |binary inst/doc/icpsrdata-vignette.R | 12 +++--- inst/doc/icpsrdata-vignette.Rmd | 6 ++- inst/doc/icpsrdata-vignette.html | 73 +++++++++++++++++++++++++-------------- man/icpsr_download.Rd | 17 ++++++--- vignettes/icpsrdata-vignette.Rmd | 6 ++- 11 files changed, 117 insertions(+), 67 deletions(-)
Title: Template Model Builder: A General Random Effect Tool Inspired by
'ADMB'
Description: With this tool, a user should be able to quickly implement
complex random effect models through simple C++ templates. The package combines
'CppAD' (C++ automatic differentiation), 'Eigen' (templated matrix-vector
library) and 'CHOLMOD' (sparse matrix routines available from R) to obtain
an efficient implementation of the applied Laplace approximation with exact
derivatives. Key features are: Automatic sparseness detection, parallelism
through 'BLAS' and parallel user templates.
Author: Kasper Kristensen [aut, cre, cph],
Brad Bell [cph],
Hans Skaug [ctb],
Arni Magnusson [ctb],
Casper Berg [ctb],
Anders Nielsen [ctb],
Martin Maechler [ctb],
Theo Michelot [ctb],
Mollie Brooks [ctb],
Alex Forrence [ctb],
Christoffer Moesgaard Albertsen [ctb],
Cole Monnahan [ctb]
Maintainer: Kasper Kristensen <kaskr@dtu.dk>
Diff between TMB versions 1.7.17 dated 2020-07-23 and 1.7.18 dated 2020-07-27
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- NEWS | 6 ++++++ inst/include/tmb_core.hpp | 4 ++-- 4 files changed, 15 insertions(+), 9 deletions(-)
Title: R6 Mathematical Sets Interface
Description: An object-oriented package for mathematical sets, upgrading the current gold-standard {sets}. Many forms of mathematical sets are implemented, including (countably finite) sets, tuples, intervals (countably infinite or uncountable), and fuzzy variants. Wrappers extend functionality by allowing symbolic representations of complex operations on sets, including unions, (cartesian) products, exponentiation, and differences (asymmetric and symmetric).
Author: Raphael Sonabend [aut, cre] (<https://orcid.org/0000-0001-9225-4654>),
Franz Kiraly [aut]
Maintainer: Raphael Sonabend <raphael.sonabend.15@ucl.ac.uk>
Diff between set6 versions 0.1.7 dated 2020-07-18 and 0.1.8 dated 2020-07-27
set6-0.1.7/set6/tests/testthat/test-set6news.R |only set6-0.1.8/set6/DESCRIPTION | 6 +-- set6-0.1.8/set6/MD5 | 15 ++++----- set6-0.1.8/set6/NEWS.md | 6 +++ set6-0.1.8/set6/R/set6.news.R | 2 + set6-0.1.8/set6/inst/doc/set6.html | 4 +- set6-0.1.8/set6/tests/testthat/test_operations_setcomplement.R | 7 ++-- set6-0.1.8/set6/tests/testthat/test_operations_setintersect.R | 9 +++-- set6-0.1.8/set6/tests/testthat/test_operations_setunion.R | 16 +++++----- 9 files changed, 38 insertions(+), 27 deletions(-)
Title: Quantitative Analysis of Textual Data
Description: A fast, flexible, and comprehensive framework for
quantitative text analysis in R. Provides functionality for corpus management,
creating and manipulating tokens and ngrams, exploring keywords in context,
forming and manipulating sparse matrices
of documents by features and feature co-occurrences, analyzing keywords, computing feature similarities and
distances, applying content dictionaries, applying supervised and unsupervised machine learning,
visually representing text and text analyses, and more.
Author: Kenneth Benoit [cre, aut, cph]
(<https://orcid.org/0000-0002-0797-564X>),
Kohei Watanabe [aut] (<https://orcid.org/0000-0001-6519-5265>),
Haiyan Wang [aut] (<https://orcid.org/0000-0003-4992-4311>),
Paul Nulty [aut] (<https://orcid.org/0000-0002-7214-4666>),
Adam Obeng [aut] (<https://orcid.org/0000-0002-2906-4775>),
Stefan Müller [aut] (<https://orcid.org/0000-0002-6315-4125>),
Akitaka Matsuo [aut] (<https://orcid.org/0000-0002-3323-6330>),
Jiong Wei Lua [aut],
Jouni Kuha [aut] (<https://orcid.org/0000-0002-1156-8465>),
William Lowe [aut] (<https://orcid.org/0000-0002-1549-6163>),
Christian Müller [ctb],
Lori Young [dtc] (Lexicoder Sentiment Dictionary 2015),
Stuart Soroka [dtc] (Lexicoder Sentiment Dictionary 2015),
Ian Fellows [cph] (authored wordcloud C source code (modified)),
European Research Council [fnd] (ERC-2011-StG 283794-QUANTESS)
Maintainer: Kenneth Benoit <kbenoit@lse.ac.uk>
Diff between quanteda versions 2.1.0 dated 2020-07-05 and 2.1.1 dated 2020-07-27
DESCRIPTION | 10 ++++---- MD5 | 38 ++++++++++++++++----------------- NEWS.md | 8 ++++++ R/corpus_reshape.R | 34 ++++++++++++----------------- R/corpus_segment.R | 14 ++++++------ R/dictionaries.R | 16 ++++++------- R/quanteda_options.R | 11 ++++++--- R/textstat_summary.R | 30 ++++++++++++-------------- R/tokenizers.R | 30 ++++++-------------------- R/utils.R | 6 +++++ inst/doc/quickstart.html | 4 +-- man/flatten_dictionary.Rd | 12 +++++----- man/quanteda_options.Rd | 8 ++++-- man/textstat_summary.Rd | 29 +++++++++++-------------- tests/data/dfmat_sotu.rda |binary tests/testthat/test-cache.R | 5 +++- tests/testthat/test-corpus_reshape.R | 19 ++++++++++++++-- tests/testthat/test-dictionaries.R | 6 +++++ tests/testthat/test-nfunctions.R | 2 - tests/testthat/test-textstat_summary.R | 30 +++++++++++++------------- 20 files changed, 164 insertions(+), 148 deletions(-)
Title: Assessment of Regression Models Performance
Description: Utilities for computing measures to assess model quality,
which are not directly provided by R's 'base' or 'stats' packages. These
include e.g. measures like r-squared, intraclass correlation coefficient
(Nakagawa, Johnson & Schielzeth (2017) <doi:10.1098/rsif.2017.0213>),
root mean squared error or functions to check models for overdispersion,
singularity or zero-inflation and more. Functions apply to a large variety of
regression models, including generalized linear models, mixed effects models
and Bayesian models.
Author: Daniel Lüdecke [aut, cre] (<https://orcid.org/0000-0002-8895-3206>),
Dominique Makowski [aut, ctb] (<https://orcid.org/0000-0001-5375-9967>),
Philip Waggoner [aut, ctb] (<https://orcid.org/0000-0002-7825-7573>),
Indrajeet Patil [aut, ctb] (<https://orcid.org/0000-0003-1995-6531>)
Maintainer: Daniel Lüdecke <d.luedecke@uke.de>
Diff between performance versions 0.4.7 dated 2020-06-14 and 0.4.8 dated 2020-07-27
DESCRIPTION | 12 MD5 | 115 +++---- NAMESPACE | 9 NEWS.md | 15 R/check_collinearity.R | 17 + R/check_distribution.R | 19 + R/check_itemscale.R | 4 R/check_normality.R | 7 R/check_outliers.R | 84 ++--- R/cronbachs_alpha.R | 2 R/icc.R | 79 ++-- R/performance_lrt.R | 6 R/print-methods.R | 38 +- R/r2.R | 22 + R/sysdata.rda |binary build/partial.rdb |binary inst/CITATION |only man/binned_residuals.Rd | 124 +++---- man/check_autocorrelation.Rd | 72 ++-- man/check_collinearity.Rd | 188 +++++------ man/check_distribution.Rd | 108 +++--- man/check_heteroscedasticity.Rd | 62 +-- man/check_homogeneity.Rd | 78 ++-- man/check_itemscale.Rd | 4 man/check_model.Rd | 116 +++---- man/check_outliers.Rd | 368 +++++++++++------------ man/check_overdispersion.Rd | 142 ++++---- man/check_singularity.Rd | 150 ++++----- man/check_zeroinflation.Rd | 76 ++-- man/cronbachs_alpha.Rd | 72 ++-- man/icc.Rd | 58 +-- man/item_reliability.Rd | 86 ++--- man/item_split_half.Rd | 74 ++-- man/looic.Rd | 48 +-- man/model_performance.Rd | 82 ++--- man/model_performance.merMod.Rd | 74 ++-- man/performance_aicc.Rd | 74 ++-- man/performance_hosmer.Rd | 66 ++-- man/performance_logloss.Rd | 72 ++-- man/performance_lrt.Rd | 58 +-- man/performance_pcp.Rd | 122 +++---- man/performance_rmse.Rd | 94 ++--- man/performance_roc.Rd | 110 +++--- man/performance_rse.Rd | 52 +-- man/performance_score.Rd | 130 ++++---- man/r2.Rd | 88 ++--- man/r2_bayes.Rd | 124 +++---- man/r2_coxsnell.Rd | 74 ++-- man/r2_efron.Rd | 68 ++-- man/r2_kullback.Rd | 54 +-- man/r2_loo.Rd | 56 +-- man/r2_mcfadden.Rd | 66 ++-- man/r2_nagelkerke.Rd | 50 +-- man/r2_tjur.Rd | 56 +-- man/r2_xu.Rd | 58 +-- man/r2_zeroinflated.Rd | 80 ++--- tests/testthat/test-check_collinearity.R | 25 + tests/testthat/test-icc.R | 15 tests/testthat/test-model_performance.bayesian.R | 27 - 59 files changed, 2076 insertions(+), 1954 deletions(-)
Title: Fit Statistical Models Using Hamiltonian Monte Carlo
Description: Provide users with a framework to learn the intricacies of the Hamiltonian Monte Carlo algorithm with hands-on experience by tuning and fitting their own models. All of the code is written in R. Theoretical references are listed below:.
Neal, Radford (2011) "Handbook of Markov Chain Monte Carlo" ISBN: 978-1420079418,
Betancourt, Michael (2017) "A Conceptual Introduction to Hamiltonian Monte Carlo" <arXiv:1701.02434>,
Thomas, S., Tu, W. (2020) "Learning Hamiltonian Monte Carlo in R" <arXiv: arXiv:2006.16194>,
Gelman, A., Carlin, J. B., Stern, H. S., Dunson, D. B., Vehtari, A., & Rubin, D. B. (2013) "Bayesian Data Analysis" ISBN: 978-1439840955,
Agresti, Alan (2015) "Foundations of Linear and Generalized Linear Models ISBN: 978-1118730034,
Pinheiro, J., Bates, D. (2006) "Mixed-effects Models in S and S-Plus" ISBN: 978-1441903174.
Author: Samuel Thomas [cre, aut],
Wanzhu Tu [ctb]
Maintainer: Samuel Thomas <samthoma@iu.edu>
Diff between hmclearn versions 0.0.3 dated 2020-06-25 and 0.0.4 dated 2020-07-27
DESCRIPTION | 20 ++-- MD5 | 40 ++++---- R/mcmc_functions.R | 10 +- README.md | 4 inst/doc/linear_mixed_effects_hmclearn.Rmd | 84 +++++++++++----- inst/doc/linear_mixed_effects_hmclearn.html | 129 +++++++++++++++----------- inst/doc/linear_regression_hmclearn.Rmd | 6 - inst/doc/linear_regression_hmclearn.html | 7 - inst/doc/logistic_mixed_effects_hmclearn.Rmd | 10 +- inst/doc/logistic_mixed_effects_hmclearn.html | 11 +- inst/doc/logistic_regression_hmclearn.Rmd | 9 + inst/doc/logistic_regression_hmclearn.html | 9 + inst/doc/poisson_regression_hmclearn.Rmd | 5 - inst/doc/poisson_regression_hmclearn.html | 7 - man/hmc.Rd | 4 man/hmc.fit.Rd | 4 vignettes/linear_mixed_effects_hmclearn.Rmd | 84 +++++++++++----- vignettes/linear_regression_hmclearn.Rmd | 6 - vignettes/logistic_mixed_effects_hmclearn.Rmd | 10 +- vignettes/logistic_regression_hmclearn.Rmd | 9 + vignettes/poisson_regression_hmclearn.Rmd | 5 - 21 files changed, 292 insertions(+), 181 deletions(-)
Title: Fast Polygon to Raster Conversion
Description: Provides a drop-in replacement for rasterize() from the 'raster'
package that takes 'sf'-type objects, and is much faster. There is support
for the main options provided by the rasterize() function, including
setting the field used and background value, and options for
aggregating multi-layer rasters. Uses the scan line algorithm attributed to
Wylie et al. (1967) <doi:10.1145/1465611.1465619>.
Author: Noam Ross [aut, cre] (<https://orcid.org/0000-0002-2136-0000>),
Michael Sumner [ctb] (<https://orcid.org/0000-0002-2471-7511>),
EcoHealth Alliance [cph],
USAID PREDICT [fnd]
Maintainer: Noam Ross <ross@ecohealthalliance.org>
Diff between fasterize versions 1.0.2 dated 2020-03-25 and 1.0.3 dated 2020-07-27
DESCRIPTION | 9 +++++---- MD5 | 39 ++++++++++++++++++++------------------- NEWS.md | 4 ++++ R/RcppExports.R | 2 +- R/raster-methods.R | 2 +- build/vignette.rds |binary inst/doc/using-fasterize.html | 40 ++++++++++++++++++++++------------------ man/fasterize.Rd | 2 +- src/Makevars |only src/check_inputs.cpp | 1 - src/check_inputs.h | 1 - src/edge.h | 1 - src/edgelist.cpp | 1 - src/fasterize.cpp | 3 +-- src/fasterize.h | 1 - src/pixelfn.cpp | 1 - src/pixelfn.h | 1 - src/rasterize_polygon.cpp | 1 - src/rasterize_polygon.h | 1 - src/utils.cpp | 1 - src/utils.h | 1 - 21 files changed, 55 insertions(+), 57 deletions(-)
Title: Data Analysis Using Regression and Multilevel/Hierarchical
Models
Description: Functions to accompany A. Gelman and J. Hill, Data Analysis Using Regression and Multilevel/Hierarchical Models, Cambridge University Press, 2007.
Author: Andrew Gelman [aut],
Yu-Sung Su [aut, cre],
Masanao Yajima [ctb],
Jennifer Hill [ctb],
Maria Grazia Pittau [ctb],
Jouni Kerman [ctb],
Tian Zheng [ctb],
Vincent Dorie [ctb]
Maintainer: Yu-Sung Su <suyusung@tsinghua.edu.cn>
Diff between arm versions 1.11-1 dated 2020-04-27 and 1.11-2 dated 2020-07-27
CHANGELOG | 7 DESCRIPTION | 10 - MD5 | 16 +- NAMESPACE | 6 R/balance.R | 393 +++++++++++++++++++++++++++++++------------------------- R/matching.R | 132 +++++++++++------- man/balance.Rd | 39 ++--- man/matching.Rd | 4 man/mcsamp.Rd | 3 9 files changed, 346 insertions(+), 264 deletions(-)
Title: Statistics and Metrics for Seismic Data
Description: Classes and functions for metrics calculation as part of the
'IRIS DMC MUSTANG' project. The functionality in this package
builds upon the base classes of the 'IRISSeismic' package.
Metrics include basic statistics as well as higher level
'health' metrics that can help identify problematic seismometers.
Author: Jonathan Callahan [aut],
Rob Casey [aut],
Mary Templeton [aut],
Gillian Sharer [aut, cre]
Maintainer: Gillian Sharer <gillian@iris.washington.edu>
Diff between IRISMustangMetrics versions 2.4.0 dated 2020-07-09 and 2.4.1 dated 2020-07-27
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- R/ISPAQUtils.R | 4 ++-- R/maxRangeMetric.R | 15 +++++++++++++-- man/IRISMustangMetrics-package.Rd | 6 ++++++ 5 files changed, 28 insertions(+), 11 deletions(-)
More information about IRISMustangMetrics at CRAN
Permanent link