Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-09-20 2.0.1
2018-12-15 1.3-3
2018-10-17 1.3-2
2017-03-15 1.3-1
2016-12-21 1.3
2015-08-21 1.2
2015-05-19 1.1
2015-05-18 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-12-20 1.3.3
2018-08-09 1.3.2
2018-07-24 1.3.1
2011-12-09 1.2.1
2010-09-16 1.2
2010-08-31 1.1
2008-10-28 1.0
Title: Compare Supervised Machine Learning Models Using Shiny App
Description: Implementation of a shiny app to easily compare supervised machine learning model performances.
You provide the data and configure each model parameter directly on the shiny app.
Different supervised learning algorithms can be tested either on Spark or H2O frameworks to suit your regression and classification tasks.
Implementation of available machine learning models on R has been done by Lantz (2013, ISBN:9781782162148).
Author: Jean Bertin
Maintainer: Jean Bertin <jean.bertin@mines-paris.org>
Diff between shinyML versions 0.2.0 dated 2019-10-29 and 1.0.0 dated 2020-10-03
shinyML-0.2.0/shinyML/R/shiny_h2o.R |only shinyML-0.2.0/shinyML/R/shiny_spark.R |only shinyML-0.2.0/shinyML/man/shiny_h2o.Rd |only shinyML-0.2.0/shinyML/man/shiny_spark.Rd |only shinyML-0.2.0/shinyML/vignettes/shinyML.html |only shinyML-1.0.0/shinyML/DESCRIPTION | 25 +++--- shinyML-1.0.0/shinyML/LICENSE.note | 5 + shinyML-1.0.0/shinyML/MD5 | 40 +++++----- shinyML-1.0.0/shinyML/NAMESPACE | 24 +++++- shinyML-1.0.0/shinyML/NEWS.md | 19 ++++ shinyML-1.0.0/shinyML/R/shinyML_classification.R |only shinyML-1.0.0/shinyML/R/shinyML_regression.R |only shinyML-1.0.0/shinyML/README.md | 62 ++++++++++----- shinyML-1.0.0/shinyML/build/vignette.rds |binary shinyML-1.0.0/shinyML/inst/doc/vignettes.R | 12 ++- shinyML-1.0.0/shinyML/inst/doc/vignettes.Rmd | 27 +++--- shinyML-1.0.0/shinyML/inst/doc/vignettes.html | 79 ++++++++++---------- shinyML-1.0.0/shinyML/man/shinyML_classification.Rd |only shinyML-1.0.0/shinyML/man/shinyML_regression.Rd |only shinyML-1.0.0/shinyML/vignettes/all_models.gif |binary shinyML-1.0.0/shinyML/vignettes/auto_ML.gif |binary shinyML-1.0.0/shinyML/vignettes/explore_data.gif |binary shinyML-1.0.0/shinyML/vignettes/logo_shinyML.jpg |only shinyML-1.0.0/shinyML/vignettes/one_model.gif |binary shinyML-1.0.0/shinyML/vignettes/shinyML.png |binary shinyML-1.0.0/shinyML/vignettes/vignettes.Rmd | 27 +++--- 26 files changed, 194 insertions(+), 126 deletions(-)
Title: HTML Widgets for R
Description: A framework for creating HTML widgets that render in various
contexts including the R console, 'R Markdown' documents, and 'Shiny'
web applications.
Author: Ramnath Vaidyanathan [aut, cph],
Yihui Xie [aut],
JJ Allaire [aut],
Joe Cheng [aut],
Carson Sievert [aut, cre] (<https://orcid.org/0000-0002-4958-2844>),
Kenton Russell [aut, cph],
RStudio [cph]
Maintainer: Carson Sievert <carson@rstudio.com>
Diff between htmlwidgets versions 1.5.1 dated 2019-10-08 and 1.5.2 dated 2020-10-03
DESCRIPTION | 18 MD5 | 44 - R/scaffold.R | 2 R/sizing.R | 12 build/vignette.rds |binary inst/NEWS | 5 inst/doc/develop_advanced.R | 18 inst/doc/develop_advanced.Rmd | 6 inst/doc/develop_advanced.html | 811 +++++++++++---------------------- inst/doc/develop_intro.R | 2 inst/doc/develop_intro.Rmd | 12 inst/doc/develop_intro.html | 1003 +++++++++++++++-------------------------- inst/doc/develop_sizing.Rmd | 2 inst/doc/develop_sizing.html | 821 +++++++++++---------------------- man/createWidget.Rd | 14 man/htmlwidgets-package.Rd | 2 man/htmlwidgets-shiny.Rd | 11 man/saveWidget.Rd | 12 man/scaffoldWidget.Rd | 2 man/sizingPolicy.Rd | 28 - vignettes/develop_advanced.Rmd | 6 vignettes/develop_intro.Rmd | 12 vignettes/develop_sizing.Rmd | 2 23 files changed, 1088 insertions(+), 1757 deletions(-)
Title: Handy File and String Manipulation
Description: This started out as a package for file and string
manipulation. Since then, the 'fs' and 'strex' packages emerged,
offering functionality previously given by this package (but it's done
better in these new ones). Those packages have hence almost pushed
'filesstrings' into extinction. However, it still has a small number
of unique, handy file manipulation functions which can be seen in the
vignette. One example is a function to remove spaces from all file
names in a directory.
Author: Rory Nolan [aut, cre, cph] (<https://orcid.org/0000-0002-5239-4043>),
Sergi Padilla-Parra [ths] (<https://orcid.org/0000-0002-8010-9481>)
Maintainer: Rory Nolan <rorynoolan@gmail.com>
Diff between filesstrings versions 3.1.6 dated 2020-09-16 and 3.1.7 dated 2020-10-03
DESCRIPTION | 17 +++++----- MD5 | 39 +++++++++++++----------- NAMESPACE | 4 -- NEWS.md | 8 ++++- R/all-equal.R | 67 ++++++++++++++++++++++++------------------ R/argument-checking.R |only R/files.R | 68 ++++++++++++++++++------------------------- R/filesstrings-package.R | 11 ++---- R/roxy.R |only R/utils.R | 2 + README.md | 2 - build/partial.rdb |binary inst/doc/files.html | 4 +- man/filesstrings.Rd | 7 +--- man/nth_number_after_mth.Rd | 2 - man/nth_number_before_mth.Rd | 2 - man/singleize.Rd | 2 - man/str_after_nth.Rd | 2 - man/str_before_nth.Rd | 2 - man/str_locate_nth.Rd | 2 - man/trim_anything.Rd | 2 - tests/testthat/test-roxy.R |only 22 files changed, 123 insertions(+), 120 deletions(-)
Title: Common Plots for Analysis
Description: Select data analysis plots, under a standardized calling interface implemented on top of 'ggplot2' and 'plotly'.
Plots of interest include: 'ROC', gain curve, scatter plot with marginal distributions,
conditioned scatter plot with marginal densities,
box and stem with matching theoretical distribution, and density with matching theoretical distribution.
Author: John Mount [aut, cre],
Nina Zumel [aut],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between WVPlots versions 1.2.9 dated 2020-09-20 and 1.3.0 dated 2020-10-03
WVPlots-1.2.9/WVPlots/R/sigr_stand_ins.R |only WVPlots-1.3.0/WVPlots/DESCRIPTION | 12 - WVPlots-1.3.0/WVPlots/MD5 | 25 +-- WVPlots-1.3.0/WVPlots/NAMESPACE | 7 - WVPlots-1.3.0/WVPlots/NEWS.md | 8 + WVPlots-1.3.0/WVPlots/R/GainCurve.R | 94 +++++++++++++ WVPlots-1.3.0/WVPlots/R/LiftCurve.R | 99 ++++++++++++++ WVPlots-1.3.0/WVPlots/R/ROC.R | 75 +++++++--- WVPlots-1.3.0/WVPlots/inst/doc/WVPlots_concept.html | 130 +++++++++---------- WVPlots-1.3.0/WVPlots/inst/doc/WVPlots_examples.html | 4 WVPlots-1.3.0/WVPlots/man/GainCurvePlotList.Rd |only WVPlots-1.3.0/WVPlots/man/LiftCurvePlot.Rd | 2 WVPlots-1.3.0/WVPlots/man/LiftCurvePlotList.Rd |only WVPlots-1.3.0/WVPlots/man/ROCPlot.Rd | 14 +- WVPlots-1.3.0/WVPlots/man/ROCPlotList.Rd | 11 + 15 files changed, 365 insertions(+), 116 deletions(-)
Title: Statistical Inference of Vine Copulas
Description: Provides tools for the statistical analysis of vine copula models.
The package includes tools for parameter estimation, model selection,
simulation, goodness-of-fit tests, and visualization. Tools for estimation,
selection and exploratory data analysis of bivariate copula models are also
provided.
Author: Thomas Nagler [aut, cre],
Ulf Schepsmeier [aut],
Jakob Stoeber [aut],
Eike Christian Brechmann [aut],
Benedikt Graeler [aut],
Tobias Erhardt [aut],
Carlos Almeida [ctb],
Aleksey Min [ctb, ths],
Claudia Czado [ctb, ths],
Mathias Hofmann [ctb],
Matthias Killiches [ctb],
Harry Joe [ctb],
Thibault Vatter [ctb]
Maintainer: Thomas Nagler <mail@tnagler.com>
Diff between VineCopula versions 2.3.0 dated 2019-11-26 and 2.4.0 dated 2020-10-03
DESCRIPTION | 8 +- MD5 | 92 ++++++++++++++--------------- NAMESPACE | 11 --- NEWS.md | 21 ++++++ R/BiCopDeriv.R | 2 R/BiCopDeriv2.R | 2 R/BiCopGofTest.R | 2 R/BiCopHfuncDeriv.R | 2 R/BiCopHfuncDeriv2.R | 2 R/BiCopLambda.R | 2 R/BiCopSelect.R | 4 - R/BiCopVuongClarke.R | 2 R/RVineGofTest3.R | 4 - R/RVineGrad.R | 6 - R/RVineHessian.R | 6 - R/RVineMLE.R | 2 R/RVineSim.R | 123 ++++++++++++++++++++++++++++++++++++---- R/RVineStdError.R | 6 - R/RVineStructureSelect.R | 2 R/TauMatrix.R | 2 R/VineCopula-package.R | 10 +-- R/preprocessors.R | 5 - README.md | 16 ++--- build/partial.rdb |binary inst/include/VineCopula/tools.h | 1 man/BiCopDeriv.Rd | 2 man/BiCopDeriv2.Rd | 2 man/BiCopGofTest.Rd | 2 man/BiCopHfuncDeriv.Rd | 2 man/BiCopHfuncDeriv2.Rd | 2 man/BiCopKDE.Rd | 2 man/BiCopLambda.Rd | 2 man/BiCopSelect.Rd | 4 - man/BiCopVuongClarke.Rd | 2 man/RVineGofTest.Rd | 4 - man/RVineGrad.Rd | 6 - man/RVineHessian.Rd | 6 - man/RVineMLE.Rd | 2 man/RVineSim.Rd | 4 - man/RVineStdError.Rd | 6 - man/RVineTreePlot.Rd | 6 - man/VineCopula-package.Rd | 10 +-- man/daxreturns.Rd | 6 + man/plot.RVineMatrix.Rd | 12 +-- src/likelihood.c | 7 -- src/pit.c | 3 src/tools.c | 9 -- 47 files changed, 268 insertions(+), 166 deletions(-)
Title: Automatic Unobserved Components Models
Description: Comprehensive analysis and forecasting
of univariate time series using automatic
unobserved components models and algorithms.
Harvey, AC (1989) <doi:10.1017/CBO9781107049994>.
Pedregal, DJ and Young PC (2002) <doi:10.1002/9780470996430>.
Durbin J and Koopman SJ (2012) <doi:10.1093/acprof:oso/9780199641178.001.0001>.
Author: Diego J. Pedregal [aut, cre] (<https://orcid.org/0000-0003-4958-0969>)
Maintainer: Diego J. Pedregal <Diego.Pedregal@uclm.es>
Diff between UComp versions 2.0 dated 2020-09-29 and 2.1 dated 2020-10-03
UComp-2.0/UComp/man/Forecast.Rd |only UComp-2.0/UComp/man/coef.UComp.Rd |only UComp-2.0/UComp/man/fitted.UComp.Rd |only UComp-2.0/UComp/man/logLik.UComp.Rd |only UComp-2.0/UComp/man/plot.UComp.Rd |only UComp-2.0/UComp/man/predict.UComp.Rd |only UComp-2.0/UComp/man/print.UComp.Rd |only UComp-2.0/UComp/man/residuals.UComp.Rd |only UComp-2.0/UComp/man/summary.UComp.Rd |only UComp-2.0/UComp/man/tsdiag.UComp.Rd |only UComp-2.1/UComp/DESCRIPTION | 8 - UComp-2.1/UComp/MD5 | 51 +++----- UComp-2.1/UComp/NAMESPACE | 6 UComp-2.1/UComp/R/RcppExports.R | 14 +- UComp-2.1/UComp/R/UCS3functions.R | 206 +++++++++------------------------ UComp-2.1/UComp/R/UCcomponents.R | 5 UComp-2.1/UComp/R/UCestim.R | 7 - UComp-2.1/UComp/R/UCfilter.R | 41 ++++++ UComp-2.1/UComp/R/UCmodel.R | 28 +++- UComp-2.1/UComp/R/UCvalidate.R | 12 + UComp-2.1/UComp/R/data.R | 2 UComp-2.1/UComp/man/OECDgdp.Rd | 54 ++++---- UComp-2.1/UComp/man/UC.Rd | 5 UComp-2.1/UComp/man/UCcomponents.Rd | 5 UComp-2.1/UComp/man/UCdisturb.Rd | 5 UComp-2.1/UComp/man/UCestim.Rd | 7 - UComp-2.1/UComp/man/UCfilter.Rd | 5 UComp-2.1/UComp/man/UChp.Rd |only UComp-2.1/UComp/man/UCmodel.Rd | 5 UComp-2.1/UComp/man/UCsetup.Rd | 5 UComp-2.1/UComp/man/UCsmooth.Rd | 5 UComp-2.1/UComp/man/UCvalidate.Rd | 6 32 files changed, 243 insertions(+), 239 deletions(-)
Title: Create, Modify and Analyse Phylogenetic Trees
Description: Efficient implementations of functions for the creation,
modification and analysis of phylogenetic trees.
Applications include:
generation of trees with specified shapes;
analysis of tree shape;
rooting of trees and extraction of subtrees;
calculation and depiction of node support;
calculation of ancestor-descendant relationships;
import and export of trees from Newick, Nexus (Maddison et al. 1997)
<doi:10.1093/sysbio/46.4.590>,
and TNT <http://www.lillo.org.ar/phylogeny/tnt/> formats;
and analysis of splits and cladistic information.
Author: Martin R. Smith [aut, cre, cph]
(<https://orcid.org/0000-0001-5660-1727>),
Emmanuel Paradis [cph] (<https://orcid.org/0000-0003-3092-2199>)
Maintainer: Martin R. Smith <martin.smith@durham.ac.uk>
Diff between TreeTools versions 1.3.0 dated 2020-09-22 and 1.3.1 dated 2020-10-03
DESCRIPTION | 6 MD5 | 30 ++-- NEWS.md | 5 R/Splits.R | 4 R/parse_files.R | 188 ++++++++++++++++------------ build/partial.rdb |binary inst/doc/filesystem-navigation.html | 4 inst/doc/load-data.html | 4 inst/doc/load-trees.html | 4 inst/extdata/tests/tnt-trees-and-matrix.tnt |only man/ReadTntTree.Rd | 2 src/TreeTools-init.c | 2 tests/figs/support-r |only tests/testthat/test-Support.R | 12 + tests/testthat/test-TreeNumber.R | 5 tests/testthat/test-mst.R | 1 tests/testthat/test-parsers.R | 27 +++- 17 files changed, 188 insertions(+), 106 deletions(-)
Title: Superfast Likelihood Inference for Stationary Gaussian Time
Series
Description: Likelihood evaluations for stationary Gaussian time series are typically obtained via the Durbin-Levinson algorithm, which scales as O(n^2) in the number of time series observations. This package provides a "superfast" O(n log^2 n) algorithm written in C++, crossing over with Durbin-Levinson around n = 300. Efficient implementations of the score and Hessian functions are also provided, leading to superfast versions of inference algorithms such as Newton-Raphson and Hamiltonian Monte Carlo. The C++ code provides a Toeplitz matrix class packaged as a header-only library, to simplify low-level usage in other packages and outside of R.
Author: Yun Ling [aut],
Martin Lysy [aut, cre]
Maintainer: Martin Lysy <mlysy@uwaterloo.ca>
Diff between SuperGauss versions 2.0.0 dated 2020-09-21 and 2.0.1 dated 2020-10-03
DESCRIPTION | 6 ++-- MD5 | 18 ++++++------ inst/doc/SuperGauss-quicktut.html | 34 ++++++++++++------------ tests/testthat/test-Circulant-basics.R | 1 tests/testthat/test-Circulant-determinant.R | 1 tests/testthat/test-Circulant-product.R | 1 tests/testthat/test-Circulant-solve.R | 1 tests/testthat/test-NormalCirculant-grad_full.R | 1 tests/testthat/test-NormalCirculant-logdens.R | 1 tests/testthat/test-fft.R | 2 + 10 files changed, 37 insertions(+), 29 deletions(-)
Title: High Performance Algorithms for Vine Copula Modeling
Description: Provides an interface to 'vinecopulib', a C++ library for vine
copula modeling. The 'rvinecopulib' package implements the core features of the
popular 'VineCopula' package, in particular inference algorithms for both vine
copula and bivariate copula models. Advantages over 'VineCopula' are a sleeker
and more modern API, improved performances, especially in high dimensions,
nonparametric and multi-parameter families, and the ability to model discrete
variables. The 'rvinecopulib' package includes 'vinecopulib' as header-only
C++ library (currently version 0.5.4). Thus users do not need to install
'vinecopulib' itself in order to use 'rvinecopulib'. Since their initial
releases, 'vinecopulib' is licensed under the MIT License, and 'rvinecopulib'
is licensed under the GNU GPL version 3.
Author: Thomas Nagler [aut, cre],
Thibault Vatter [aut]
Maintainer: Thomas Nagler <info@vinecopulib.org>
Diff between rvinecopulib versions 0.5.3.1.0 dated 2020-08-12 and 0.5.4.1.0 dated 2020-10-03
DESCRIPTION | 8 MD5 | 32 - NEWS.md | 15 R/bicop_methods.R | 3 R/rvinecopulib.R | 2 R/vinecop_methods.R | 3 README.md | 2 inst/include/vinecopulib/bicop/frank.hpp | 4 inst/include/vinecopulib/bicop/implementation/class.ipp | 18 inst/include/vinecopulib/bicop/implementation/frank.ipp | 287 ++++---------- inst/include/vinecopulib/bicop/implementation/kernel.ipp | 1 inst/include/vinecopulib/version.hpp | 4 inst/include/vinecopulib/vinecop/implementation/class.ipp | 5 man/bicop_methods.Rd | 3 man/rvinecopulib.Rd | 2 man/vinecop_methods.Rd | 3 tests/testthat/Rplots.pdf |binary 17 files changed, 175 insertions(+), 217 deletions(-)
Title: Spectral Analysis Tools using the Multitaper Method
Description: Implements multitaper spectral analysis using discrete prolate spheroidal sequences (Slepians) and sine tapers. It includes an adaptive weighted multitaper spectral estimate, a coherence estimate, Thomson's Harmonic F-test, and complex demodulation. The Slepians sequences are generated efficiently using a tridiagonal matrix solution, and jackknifed confidence intervals are available for most estimates. This package is an implementation of the method described in D.J. Thomson (1982) "Spectrum estimation and harmonic analysis" <doi:10.1109/PROC.1982.12433>.
Author: Karim Rahim <karim.rahim@queensu.ca>, Wesley S. Burr <wesleyburr@trentu.ca>
Maintainer: Karim Rahim <karim.rahim@queensu.ca>
Diff between multitaper versions 1.0-14 dated 2017-10-25 and 1.0-15 dated 2020-10-03
DESCRIPTION | 11 ++++++----- MD5 | 6 +++--- R/plotsHelper.R | 2 +- man/spec.mtm.Rd | 8 ++------ 4 files changed, 12 insertions(+), 15 deletions(-)
Title: Mini Games from Adventures of Beta and Bit
Description: Three games: proton, frequon and regression. Each one is a console-based data-crunching game for younger and older data scientists.
Act as a data-hacker and find Slawomir Pietraszko's credentials to the Proton server.
In proton you have to solve four data-based puzzles to find the login and password.
There are many ways to solve these puzzles. You may use loops, data filtering, ordering, aggregation or other tools.
Only basics knowledge of R is required to play the game, yet the more functions you know, the more approaches you can try.
In frequon you will help to perform statistical cryptanalytic attack on a corpus of ciphered messages.
This time seven sub-tasks are pushing the bar much higher. Do you accept the challenge?
In regression you will test your modeling skills in a series of eight sub-tasks.
Try only if ANOVA is your close friend.
It's a part of Beta and Bit project.
You will find more about the Beta and Bit project at <https://betabit.wiki>.
Author: Przemyslaw Biecek [aut, cre],
Witold Chodor [trl],
Katarzyna Fak [aut],
Tomasz Zoltak [aut],
Foundation SmarterPoland.pl [cph]
Maintainer: Przemyslaw Biecek <przemyslaw.biecek@gmail.com>
Diff between BetaBit versions 1.3 dated 2016-07-30 and 1.4 dated 2020-10-03
BetaBit-1.3/BetaBit/README.md |only BetaBit-1.3/BetaBit/data/datalist |only BetaBit-1.4/BetaBit/DESCRIPTION | 13 ++++--- BetaBit-1.4/BetaBit/MD5 | 36 +++++++++++----------- BetaBit-1.4/BetaBit/NAMESPACE | 4 ++ BetaBit-1.4/BetaBit/R/read_gpx.R |only BetaBit-1.4/BetaBit/man/EnglishLetterFrequency.Rd | 5 +-- BetaBit-1.4/BetaBit/man/FSW.Rd | 5 +-- BetaBit-1.4/BetaBit/man/bash_history.Rd | 5 +-- BetaBit-1.4/BetaBit/man/dataFSW.Rd | 5 +-- BetaBit-1.4/BetaBit/man/employees.Rd | 5 +-- BetaBit-1.4/BetaBit/man/frequon.Rd | 1 BetaBit-1.4/BetaBit/man/guns.Rd | 7 +--- BetaBit-1.4/BetaBit/man/logs.Rd | 5 +-- BetaBit-1.4/BetaBit/man/proton.Rd | 1 BetaBit-1.4/BetaBit/man/read_gpx.Rd |only BetaBit-1.4/BetaBit/man/regression.Rd | 1 BetaBit-1.4/BetaBit/man/top1000passwords.Rd | 5 +-- BetaBit-1.4/BetaBit/man/top100commonWords.Rd | 5 +-- BetaBit-1.4/BetaBit/man/varLabels.Rd | 5 +-- BetaBit-1.4/BetaBit/man/wikiquotes.Rd | 5 +-- 21 files changed, 62 insertions(+), 51 deletions(-)
Title: Sparse Arrays and Multivariate Polynomials
Description: Sparse arrays interpreted as multivariate polynomials.
Author: Robin K. S. Hankin [aut, cre] (<https://orcid.org/0000-0001-5982-0415>)
Maintainer: Robin K. S. Hankin <hankin.robin@gmail.com>
Diff between spray versions 1.0-9 dated 2020-05-17 and 1.0-10 dated 2020-10-03
DESCRIPTION | 12 ++++++------ MD5 | 12 ++++++------ NAMESPACE | 1 + README.md | 2 +- build/spray.pdf |binary build/vignette.rds |binary inst/doc/spray.pdf |binary 7 files changed, 14 insertions(+), 13 deletions(-)
Title: Logistic Regression Trees
Description: A logistic regression tree is a decision tree with logistic regressions at its leaves. A particular stochastic expectation maximization algorithm is used to draw a few good trees, that are then assessed via the user's criterion of choice among BIC / AIC / test set Gini. The formal development is given in a PhD chapter, see Ehrhardt (2019) <https://github.com/adimajo/manuscrit_these/releases/>.
Author: Adrien Ehrhardt [aut, cre]
Maintainer: Adrien Ehrhardt <adrien.ehrhardt@centraliens-lille.org>
Diff between glmtree versions 0.1 dated 2019-10-06 and 0.2 dated 2020-10-03
DESCRIPTION | 10 MD5 | 36 - R/cutDataset.R | 49 - R/generateData.R | 83 +- R/glmtree.R | 219 +++---- R/normalizedGini.R | 15 R/predict_tweaked.R | 18 build/vignette.rds |binary inst/CITATION |only inst/doc/glmtree.R | 16 inst/doc/glmtree.html | 1049 +++++++++++++++++----------------- inst/document.R |only inst/lint.R |only inst/rhubcheck.R |only man/glmdisc-class.Rd | 1 man/glmtree.Rd | 19 man/normalizedGini.Rd | 2 tests/testthat/Rplots.pdf |only tests/testthat/test-cutdataset.R | 24 tests/testthat/test-generatedata.R |only tests/testthat/test-glmtree.R |only tests/testthat/test-initialization.R |only tests/testthat/test-normalizedgini.R |only tests/testthat/test-predict_tweaked.R |only 24 files changed, 814 insertions(+), 727 deletions(-)
Title: 3D Animated Interactive Visualizations Using SVG and WebGL
Description: Creates 3D animated, interactive visualizations that can be viewed in a web browser.
Author: Aaron M Olsen, Alejandro J Romero
Maintainer: Aaron M Olsen <aarolsen@gmail.com>
Diff between svgViewR versions 1.4 dated 2019-07-09 and 1.4.1 dated 2020-10-03
svgViewR-1.4.1/svgViewR/DESCRIPTION | 14 svgViewR-1.4.1/svgViewR/MD5 | 99 ++-- svgViewR-1.4.1/svgViewR/NAMESPACE | 2 svgViewR-1.4.1/svgViewR/R/RM2quat_svg.R |only svgViewR-1.4.1/svgViewR/R/addMeshes.R |only svgViewR-1.4.1/svgViewR/R/applyQuat_svg.R |only svgViewR-1.4.1/svgViewR/R/axisAngle2Tmat.R | 13 svgViewR-1.4.1/svgViewR/R/cameraParameters.R | 7 svgViewR-1.4.1/svgViewR/R/cleanMesh.R |only svgViewR-1.4.1/svgViewR/R/cprod_svg.R | 2 svgViewR-1.4.1/svgViewR/R/create_circle_plane_mesh.R |only svgViewR-1.4.1/svgViewR/R/create_cuboid_mesh.R |only svgViewR-1.4.1/svgViewR/R/create_curved_plane_mesh.R |only svgViewR-1.4.1/svgViewR/R/create_curved_ring_mesh.R |only svgViewR-1.4.1/svgViewR/R/create_cylinder_mesh.R |only svgViewR-1.4.1/svgViewR/R/create_plane_mesh.R | 24 - svgViewR-1.4.1/svgViewR/R/create_ring_plane_mesh.R |only svgViewR-1.4.1/svgViewR/R/create_square_ring_mesh.R |only svgViewR-1.4.1/svgViewR/R/darkenCol.R | 9 svgViewR-1.4.1/svgViewR/R/fitPlane_svg.R |only svgViewR-1.4.1/svgViewR/R/lightenCol.R | 9 svgViewR-1.4.1/svgViewR/R/quat2RM_svg.R |only svgViewR-1.4.1/svgViewR/R/readOBJ.R | 3 svgViewR-1.4.1/svgViewR/R/set_plane_corners.R |only svgViewR-1.4.1/svgViewR/R/svg.arrow.R | 23 svgViewR-1.4.1/svgViewR/R/svg.box.R | 6 svgViewR-1.4.1/svgViewR/R/svg.carrow.R | 6 svgViewR-1.4.1/svgViewR/R/svg.ccuboid.R | 1 svgViewR-1.4.1/svgViewR/R/svg.cone.R | 6 svgViewR-1.4.1/svgViewR/R/svg.coupler.R | 8 svgViewR-1.4.1/svgViewR/R/svg.cplanes.R | 60 +- svgViewR-1.4.1/svgViewR/R/svg.cuboid.R | 47 - svgViewR-1.4.1/svgViewR/R/svg.cylinder.R | 6 svgViewR-1.4.1/svgViewR/R/svg.dcylinder.R | 5 svgViewR-1.4.1/svgViewR/R/svg.frame.R | 6 svgViewR-1.4.1/svgViewR/R/svg.iplanes.R |only svgViewR-1.4.1/svgViewR/R/svg.lines.R | 7 svgViewR-1.4.1/svgViewR/R/svg.mesh.R | 237 ++++++++-- svgViewR-1.4.1/svgViewR/R/svg.new.R | 21 svgViewR-1.4.1/svgViewR/R/svg.open.R | 20 svgViewR-1.4.1/svgViewR/R/svg.pal.R | 21 svgViewR-1.4.1/svgViewR/R/svg.panel.R |only svgViewR-1.4.1/svgViewR/R/svg.plane.R | 1 svgViewR-1.4.1/svgViewR/R/svg.socket.R | 1 svgViewR-1.4.1/svgViewR/R/svg.sphere.R | 1 svgViewR-1.4.1/svgViewR/R/svg.spheres.R | 14 svgViewR-1.4.1/svgViewR/R/svg.text.R | 4 svgViewR-1.4.1/svgViewR/R/svg.transform.R | 46 + svgViewR-1.4.1/svgViewR/R/svg.triangle.R | 1 svgViewR-1.4.1/svgViewR/R/webColor.R | 14 svgViewR-1.4.1/svgViewR/R/writeOBJ.R | 14 svgViewR-1.4.1/svgViewR/R/write_html.R | 37 + svgViewR-1.4.1/svgViewR/inst/extdata/css/server_stylesheet.css | 25 + svgViewR-1.4.1/svgViewR/inst/extdata/js/render.scene.js | 188 +++++-- svgViewR-1.4.1/svgViewR/man/svg.mesh.Rd | 19 svgViewR-1.4.1/svgViewR/man/svg.new.Rd | 12 svgViewR-1.4.1/svgViewR/man/svgViewR-package.Rd | 25 - svgViewR-1.4/svgViewR/R/RM2quat.R |only svgViewR-1.4/svgViewR/R/applyQuat.R |only svgViewR-1.4/svgViewR/R/quat2RM.R |only 60 files changed, 812 insertions(+), 252 deletions(-)
Title: Download Data from the International Monetary Fund's Data API
Description: Explore and download data from the International Monetary Fund's
data API <http://data.imf.org/>.
Author: Christopher Gandrud [aut, cre]
Maintainer: Christopher Gandrud <christopher.gandrud@gmail.com>
Diff between imfr versions 0.1.9 dated 2020-08-29 and 0.1.9.1 dated 2020-10-03
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- NEWS | 5 +++++ R/utils.R | 28 ++++++++++++++++++++-------- tests/testthat/test-next.R | 6 ++++++ 5 files changed, 39 insertions(+), 16 deletions(-)
Title: Asymptotic Complexity Testing Framework
Description: It classifies the asymptotic time/memory complexity class for an
algorithm/function through the complexity classifiers, with data
frames returned by the quantifiers. The data frames can be passed
onto the plotting functions for obtaining a visual description of
the benchmarks against data sizes if the user intends to diagnose
the trend via the traditional method. For testing the algorithm
against an expected time complexity class, the user can directly
use the expect functions. Please check
<https://anirban166.github.io/testComplexity/articles/testComplexity>
to get started.
Author: Anirban Chetia <bloodraven166@gmail.com>
Maintainer: Anirban Cheta <bloodraven166@gmail.com>
Diff between testComplexity versions 0.1.0 dated 2020-09-22 and 0.1.1 dated 2020-10-03
DESCRIPTION | 6 ++-- MD5 | 33 +++++++++++++-------------- NEWS.md |only R/asymptoticMemoryComplexityClass.R | 3 ++ R/asymptoticMemoryUsage.R | 6 ++++ R/expect_linear_time.R | 1 R/expect_loglinear_time.R | 1 R/expect_quadratic_time.R | 1 R/expect_time_complexity.R | 3 -- R/plotMemoryUsage.R | 3 ++ man/asymptoticMemoryComplexityClass.Rd | 3 ++ man/asymptoticMemoryUsage.Rd | 3 ++ man/expect_linear_time.Rd | 1 man/expect_loglinear_time.Rd | 1 man/expect_quadratic_time.Rd | 1 man/expect_time_complexity.Rd | 3 -- man/plotMemoryUsage.Rd | 3 ++ tests/testthat/test-testsfortestComplexity.R | 18 +++++++++----- 18 files changed, 54 insertions(+), 36 deletions(-)
More information about testComplexity at CRAN
Permanent link
Title: Common R Scripts and Utilities Used by the Statnet Project
Software
Description: Non-statistical utilities used by the software developed by the Statnet Project. They may also be of use to others.
Author: Pavel N. Krivitsky [aut, cre] (<https://orcid.org/0000-0002-9101-3362>),
Skye Bender-deMoll [ctb]
Maintainer: Pavel N. Krivitsky <pavel@statnet.org>
Diff between statnet.common versions 4.3.0 dated 2019-06-02 and 4.4.1 dated 2020-10-03
statnet.common-4.3.0/statnet.common/R/rle_utils.R |only statnet.common-4.3.0/statnet.common/build |only statnet.common-4.3.0/statnet.common/man/as.rle.Rd |only statnet.common-4.3.0/statnet.common/man/compress.data.frame.Rd |only statnet.common-4.3.0/statnet.common/man/rle.utils.Rd |only statnet.common-4.3.0/statnet.common/src/rle_utils.c |only statnet.common-4.4.1/statnet.common/DESCRIPTION | 16 - statnet.common-4.4.1/statnet.common/LICENSE | 5 statnet.common-4.4.1/statnet.common/MD5 | 70 +++---- statnet.common-4.4.1/statnet.common/NAMESPACE | 30 +-- statnet.common-4.4.1/statnet.common/NEWS | 47 ++++ statnet.common-4.4.1/statnet.common/NEWS.md | 34 +++ statnet.common-4.4.1/statnet.common/R/cite.utilities.R | 2 statnet.common-4.4.1/statnet.common/R/control.utilities.R | 70 ++++++- statnet.common-4.4.1/statnet.common/R/deprecation_utils.R | 2 statnet.common-4.4.1/statnet.common/R/formula.utilities.R | 57 +++++ statnet.common-4.4.1/statnet.common/R/logspace.utils.R | 13 - statnet.common-4.4.1/statnet.common/R/mcmc-utils.R | 2 statnet.common-4.4.1/statnet.common/R/misc.utilities.R | 100 ++++++++-- statnet.common-4.4.1/statnet.common/R/rle_reexport.R |only statnet.common-4.4.1/statnet.common/R/startup.utilities.R | 9 statnet.common-4.4.1/statnet.common/R/statnet.common-deprecated.R |only statnet.common-4.4.1/statnet.common/R/string.utilities.R | 2 statnet.common-4.4.1/statnet.common/R/wmatrix.R | 8 statnet.common-4.4.1/statnet.common/R/zzz.R | 2 statnet.common-4.4.1/statnet.common/inst/CITATION | 6 statnet.common-4.4.1/statnet.common/man/check.control.class.Rd | 8 statnet.common-4.4.1/statnet.common/man/compress_rows.Rd | 6 statnet.common-4.4.1/statnet.common/man/compress_rows.data.frame.Rd |only statnet.common-4.4.1/statnet.common/man/deInf.Rd |only statnet.common-4.4.1/statnet.common/man/despace.Rd | 2 statnet.common-4.4.1/statnet.common/man/diff.control.list.Rd |only statnet.common-4.4.1/statnet.common/man/forkTimeout.Rd | 8 statnet.common-4.4.1/statnet.common/man/logspace.utils.Rd | 9 statnet.common-4.4.1/statnet.common/man/opttest.Rd | 9 statnet.common-4.4.1/statnet.common/man/persistEval.Rd | 28 +- statnet.common-4.4.1/statnet.common/man/print.control.list.Rd | 6 statnet.common-4.4.1/statnet.common/man/rle-reexport.Rd |only statnet.common-4.4.1/statnet.common/man/set.control.class.Rd | 8 statnet.common-4.4.1/statnet.common/man/split.array.Rd |only statnet.common-4.4.1/statnet.common/man/trim_env.Rd |only statnet.common-4.4.1/statnet.common/man/wmatrix.Rd | 26 ++ statnet.common-4.4.1/statnet.common/src/init.c | 4 43 files changed, 431 insertions(+), 158 deletions(-)
More information about statnet.common at CRAN
Permanent link
Title: Mixed-Effect Models, Particularly Spatial Models
Description: Inference based on mixed-effect models, including generalized linear mixed models with spatial correlations and models with non-Gaussian random effects (e.g., Beta). Various approximations of likelihood or restricted likelihood are implemented, in particular Laplace approximation and h-likelihood (Lee and Nelder 2001 <doi:10.1093/biomet/88.4.987>). Both classical geostatistical models, and Markov random field models on irregular grids (as considered in the 'INLA' package, <http://www.r-inla.org>), can be fitted. Variation in residual variance (heteroscedasticity) can itself be represented by a mixed-effect model.
Author: François Rousset [aut, cre, cph]
(<https://orcid.org/0000-0003-4670-0371>),
Jean-Baptiste Ferdy [aut, cph],
Alexandre Courtiol [aut] (<https://orcid.org/0000-0003-0637-2959>),
GSL authors [ctb] (src/gsl_bessel.*)
Maintainer: François Rousset <francois.rousset@umontpellier.fr>
Diff between spaMM versions 3.4.1 dated 2020-08-11 and 3.5.0 dated 2020-10-03
DESCRIPTION | 8 MD5 | 88 ++++---- R/HLCor_body.R | 15 - R/HLfit_body.R | 16 + R/LR.R | 32 +-- R/RcppExports.R | 4 R/calc_logdisp_cov.R | 72 +++--- R/confint.R | 2 R/corrHLfit-internals.R | 15 + R/corrHLfit.R | 7 R/correlationFns.R | 15 + R/extractors.R | 54 ++++- R/fitme.R | 7 R/fitmecorrHLfit_body_internals.R | 30 +- R/geo_info.R | 29 +- R/get_cPredVar.R | 2 R/newPLS.R | 22 +- R/postfit_internals.R | 7 R/predict.R | 33 ++- R/preprocess.R | 10 R/preprocess_internals.R | 23 +- R/sXaug_Matrix_QRP_CHM.R | 3 R/source_MV.R | 369 +++++++++++++++++++++++++++++++++-- R/spaMM_boot.R | 3 R/update.HL.R | 2 R/utils.R | 8 build/partial.rdb |binary inst/NEWS.Rd | 21 + man/CauchyCorr.Rd | 5 man/Matern.corr.Rd | 16 + man/confint.Rd | 14 + man/extractors.Rd | 7 man/fitme.Rd | 10 man/fix_predVar.Rd | 2 man/get_RLRSim_args.Rd |only man/get_cPredVar.Rd | 2 man/get_inits_from_fit.Rd | 5 man/get_ranPars.Rd | 28 +- man/options.Rd | 2 man/spaMM.Rd | 7 src/RcppExports.cpp | 13 + src/gsl_bessel.cpp | 25 ++ tests/testthat/test-CAR.R | 1 tests/testthat/test-IsoriX.R | 1 tests/testthat/test-nested-geostat.R |only tests/testthat/test-predVar.R | 4 46 files changed, 831 insertions(+), 208 deletions(-)
Title: R Client for the Microsoft Cognitive Services 'Text-to-Speech'
REST API
Description: R Client for the Microsoft Cognitive Services
'Text-to-Speech' REST API, including voice synthesis. A valid account
must be registered at the Microsoft Cognitive Services website
<https://azure.microsoft.com/services/cognitive-services/> in order to
obtain a (free) API key. Without an API key, this package will not
work properly.
Author: John Muschelli [aut, cre] (<https://orcid.org/0000-0001-6469-1750>)
Maintainer: John Muschelli <muschellij2@gmail.com>
Diff between mscstts versions 0.6.0 dated 2020-10-01 and 0.6.1 dated 2020-10-03
DESCRIPTION | 6 +++--- MD5 | 2 +- 2 files changed, 4 insertions(+), 4 deletions(-)
Title: Multi-Collinearity Visualization
Description: Visualize the relationship between linear regression variables and causes of multi-collinearity.
Implements the method in Lin et. al. (2020) <doi:10.1080/10618600.2020.1779729>.
Author: Kevin Wang [aut, cre],
Chen Lin [aut],
Samuel Mueller [aut]
Maintainer: Kevin Wang <kevin.wang09@gmail.com>
Diff between mcvis versions 1.0.4 dated 2020-06-03 and 1.0.6 dated 2020-10-03
mcvis-1.0.4/mcvis/R/ggplot.mcvis.R |only mcvis-1.0.4/mcvis/man/ggplot.mcvis.Rd |only mcvis-1.0.4/mcvis/tests/testthat/test-vif-intercept.R |only mcvis-1.0.4/mcvis/tests/testthat/test-vif-nointercept.R |only mcvis-1.0.6/mcvis/DESCRIPTION | 20 +- mcvis-1.0.6/mcvis/MD5 | 35 +-- mcvis-1.0.6/mcvis/NAMESPACE | 4 mcvis-1.0.6/mcvis/NEWS.md | 5 mcvis-1.0.6/mcvis/R/alt_plot.R |only mcvis-1.0.6/mcvis/R/ggplot_mcvis.R |only mcvis-1.0.6/mcvis/R/igraph_mcvis.R |only mcvis-1.0.6/mcvis/R/mcvis.R | 30 ++- mcvis-1.0.6/mcvis/R/plot.mcvis.R | 79 +------- mcvis-1.0.6/mcvis/R/shiny_mcvis.R | 4 mcvis-1.0.6/mcvis/inst/CITATION | 5 mcvis-1.0.6/mcvis/inst/doc/mcvis.R | 10 - mcvis-1.0.6/mcvis/inst/doc/mcvis.Rmd | 36 ++- mcvis-1.0.6/mcvis/inst/doc/mcvis.html | 150 ++++++++-------- mcvis-1.0.6/mcvis/man/plot.mcvis.Rd | 55 ++++- mcvis-1.0.6/mcvis/man/shiny_mcvis.Rd | 4 mcvis-1.0.6/mcvis/tests/testthat/test-plot-mcvis.R | 7 mcvis-1.0.6/mcvis/vignettes/mcvis.Rmd | 36 ++- 22 files changed, 257 insertions(+), 223 deletions(-)
Title: Metabolomics Personalized Pathway Analysis Tool
Description: A personalized metabolites and pathway analysis tool. With the metabolites data provided by users, lilikoi maps the metabolites data into pathways and calculates pathway deregulation scores. It enables users to perform exploratory analysis, classification and prognosis analysis on both metabolites and pathways. References: Fadhl M AlAkwaa, Breck Yunits, Sijia Huang, Hassam Alhajaji, Lana X Garmire <doi.org/10.1093/gigascience/giy136> H. Paul Benton <http://www.metabolomics-forum.com/index.php?topic=281.0> Jeff Xia <https://github.com/cangfengzhe/Metabo/blob/master/MetaboAnalyst/website/name_match.R> Travers Ching, Xun Zhu, Lana X. Garmire (2018) <doi:10.1371/journal.pcbi.1006076>.
Author: Xinying Fang [aut],
Yu Liu [aut],
Zhijie Ren [aut],
Fadhl Alakwaa [aut],
Sijia Huang [aut],
Lana Garmire [aut, cre]
Maintainer: Lana Garmire <lgarmire@med.umich.edu>
Diff between lilikoi versions 2.0.1 dated 2020-08-24 and 2.0.2 dated 2020-10-03
DESCRIPTION | 8 +- MD5 | 24 +++--- R/lilikoi.featuresSelection.r | 2 R/lilikoi.globals.R | 5 + R/lilikoi.machine_learning.r | 21 ++--- R/lilikoi.meta_path.R | 147 +++++++++++++++++++++++++--------------- R/lilikoi.preproc_knn.R | 2 R/lilikoi.prognosis.R | 4 - inst/doc/Vignette.html | 4 - man/lilikoi.machine_learning.Rd | 6 + man/lilikoi.meta_path.Rd | 7 - man/lilikoi.preproc_knn.Rd | 2 man/lilikoi.prognosis.Rd | 4 - 13 files changed, 139 insertions(+), 97 deletions(-)
Title: Multivariate Elastic Net Regression
Description: Implements high-dimensional multivariate regression by stacked generalisation (Wolpert 1992 <doi:10.1016/S0893-6080(05)80023-1>). For positively correlated outcomes, a single multivariate regression is typically more predictive than multiple univariate regressions. Includes functions for model fitting, extracting coefficients, outcome prediction, and performance measurement. If required, install MRCE from GitHub (<https://github.com/cran/MRCE>).
Author: Armin Rauschenberger [aut, cre]
Maintainer: Armin Rauschenberger <armin.rauschenberger@uni.lu>
Diff between joinet versions 0.0.3 dated 2019-11-13 and 0.0.5 dated 2020-10-03
DESCRIPTION | 15 - MD5 | 32 +- NEWS.md | 8 R/functions.R | 651 +++++++++++++++++++++++++++++++++++++++++++++++--- R/pkgname.R | 4 README.md | 12 build/vignette.rds |binary inst/doc/article.Rmd | 7 inst/doc/article.html | 13 inst/doc/joinet.R | 39 -- inst/doc/joinet.Rmd | 19 - inst/doc/joinet.html | 39 -- man/cv.joinet.Rd | 35 ++ man/joinet-package.Rd | 4 man/joinet.Rd | 18 - vignettes/article.Rmd | 7 vignettes/joinet.Rmd | 19 - 17 files changed, 741 insertions(+), 181 deletions(-)
Title: Fast Gaussian Process Computation Using Vecchia's Approximation
Description: Functions for fitting and doing predictions with
Gaussian process models using Vecchia's (1988) approximation.
Package also includes functions for reordering input locations,
finding ordered nearest neighbors (with help from 'FNN' package),
grouping operations, and conditional simulations.
Covariance functions for spatial and spatial-temporal data
on Euclidean domains and spheres are provided. The original
approximation is due to Vecchia (1988)
<http://www.jstor.org/stable/2345768>, and the reordering and
grouping methods are from Guinness (2018)
<doi:10.1080/00401706.2018.1437476>.
Model fitting employs a Fisher scoring algorithm described
in Guinness (2019) <arXiv:1905.08374>.
Author: Joseph Guinness [aut, cre],
Matthias Katzfuss [aut],
Youssef Fahmy [aut]
Maintainer: Joseph Guinness <joeguinness@gmail.com>
Diff between GpGp versions 0.2.2 dated 2020-07-12 and 0.3.0 dated 2020-10-03
DESCRIPTION | 16 - MD5 | 53 ++--- NEWS.md | 8 R/argo2016.R | 4 R/fisher_scoring.R | 26 +- R/fit_model.R | 5 R/predictions.R | 2 README.md | 9 data/datalist |only man/argo2016.Rd | 2 src/Makevars | 3 src/RcppExports.cpp | 360 +++++++++++++++++++-------------------- src/basis.h | 5 src/covmatrix_funs.h | 4 src/covmatrix_funs_01.h | 70 +++---- src/covmatrix_funs_02.h | 85 ++++----- src/covmatrix_funs_03.h | 111 +++++------- src/covmatrix_funs_04.h | 25 +- src/covmatrix_funs_05.h | 25 +- src/covmatrix_funs_06.h | 45 ++-- src/covmatrix_funs_07.h | 45 ++-- src/covmatrix_funs_08.h | 57 +++--- src/covmatrix_funs_09.h | 21 +- src/covmatrix_funs_10.h | 37 +--- src/covmatrix_funs_11.h | 37 +--- src/covmatrix_funs_12.h | 37 +--- src/onepass.h | 220 +++++++++++++++-------- src/vecchia_loglik_grad_info.cpp | 8 28 files changed, 698 insertions(+), 622 deletions(-)
Title: Wrapper for 'FFTW3' Includes: One-Dimensional Univariate,
One-Dimensional Multivariate, and Two-Dimensional Transform
Description: Provides a wrapper for several 'FFTW' functions. This package provides access to the two-dimensional 'FFT', the multivariate 'FFT', and the one-dimensional real to complex 'FFT' using the 'FFTW3' library. The package includes the functions fftw() and mvfftw() which are designed to mimic the functionality of the R functions fft() and mvfft(). The 'FFT' functions have a parameter that allows them to not return the redundant complex conjugate when the input is real data.
Author: Karim Rahim <karim.rahim@queensu.ca>
Maintainer: Karim Rahim <karim.rahim@queensu.ca>
Diff between fftwtools versions 0.9-8 dated 2017-03-25 and 0.9-9 dated 2020-10-03
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- build/vignette.rds |binary inst/doc/testTimeAndSimpleUse.R | 1 - inst/doc/testTimeAndSimpleUse.pdf |binary 5 files changed, 8 insertions(+), 9 deletions(-)
Title: Mixed Effect Excess Hazard Models
Description: Fit flexible (excess) hazard regression models with the possibility of including non-proportional effects of covariables and of adding a random effect at the cluster level (corresponding to a shared frailty).
Author: Hadrien Charvat, Aurelien Belot
Maintainer: Hadrien Charvat <chadrien@ncc.go.jp>
Diff between mexhaz versions 1.8 dated 2020-07-08 and 1.9 dated 2020-10-03
DESCRIPTION | 10 +++++---- MD5 | 21 ++++++++++++++----- NEWS | 9 ++++++++ R/mexhaz.R | 56 +++++++++++++++-------------------------------------- R/predict.mexhaz.R | 47 ++++++++++++++++++-------------------------- build |only inst |only src/DeltaWeibR.c | 2 - src/HazardWeibC.c |only src/HazardWeibL.c |only src/HazardWeibR.c |only src/init.c | 6 +++++ vignettes |only 13 files changed, 73 insertions(+), 78 deletions(-)