Sun, 03 Oct 2021

Package xpectr updated to version 0.4.1 with previous version 0.4.0 dated 2020-06-18

Title: Generates Expectations for 'testthat' Unit Testing
Description: Helps systematize and ease the process of building unit tests with the 'testthat' package by providing tools for generating expectations.
Author: Ludvig Renbo Olsen [aut, cre], R. Mark Sharp [ctb]
Maintainer: Ludvig Renbo Olsen <r-pkgs@ludvigolsen.dk>

Diff between xpectr versions 0.4.0 dated 2020-06-18 and 0.4.1 dated 2021-10-03

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Package MatTransMix updated to version 0.1.15 with previous version 0.1.14 dated 2021-07-13

Title: Clustering with Matrix Gaussian and Matrix Transformation Mixture Models
Description: Provides matrix Gaussian mixture models, matrix transformation mixture models and their model-based clustering results. The parsimonious models of the mean matrices and variance covariance matrices are implemented with a total of 196 variations.
Author: Xuwen Zhu [aut, cre], Volodymyr Melnykov [aut], Shuchismita Sarkar [ctb], Michael Hutt [ctb, cph], Stephen Moshier [ctb, cph], Rouben Rostamian [ctb, cph], Carl Edward Rasmussen [ctb, cph], Dianne Cook [ctb, cph]
Maintainer: Xuwen Zhu <xzhu20@cba.ua.edu>

Diff between MatTransMix versions 0.1.14 dated 2021-07-13 and 0.1.15 dated 2021-10-03

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Package vtree updated to version 5.4.6 with previous version 5.1.9 dated 2021-01-17

Title: Display Information About Nested Subsets of a Data Frame
Description: A tool for calculating and drawing "variable trees". Variable trees display information about nested subsets of a data frame.
Author: Nick Barrowman [aut, cre] Sebastian Gatscha <kona1@gmx.at> [aut] (Shiny interface) Franco Momoli <fmomoli@uottawa.ca> [cph] (the.matrix data frame)
Maintainer: Nick Barrowman <nbarrowman@cheo.on.ca>

Diff between vtree versions 5.1.9 dated 2021-01-17 and 5.4.6 dated 2021-10-03

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Package LCCR updated to version 1.2 with previous version 1.1 dated 2021-09-19

Title: Latent Class Capture-Recapture Models
Description: Estimation of latent class models with individual covariates for capture-recapture data. See Forcina and Bartolucci (2021)<arxiv:2106.03811>.
Author: Francesco Bartolucci [aut, cre], Antonio Forcina [aut]
Maintainer: Francesco Bartolucci <francesco.bartolucci@unipg.it>

Diff between LCCR versions 1.1 dated 2021-09-19 and 1.2 dated 2021-10-03

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Package supc updated to version 0.2.5 with previous version 0.2.4 dated 2021-09-24

Title: The Self-Updating Process Clustering Algorithms
Description: Implements the self-updating process clustering algorithms proposed in Shiu and Chen (2016) <doi:10.1080/00949655.2015.1049605>.
Author: Wush Wu [aut, cre], Shang-Ying Shiu [aut, ctb]
Maintainer: Wush Wu <wush978@gmail.com>

Diff between supc versions 0.2.4 dated 2021-09-24 and 0.2.5 dated 2021-10-03

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Package runner updated to version 0.4.1 with previous version 0.4.0 dated 2021-04-22

Title: Running Operations for Vectors
Description: Lightweight library for rolling windows operations. Package enables full control over the window length, window lag and a time indices. With a runner one can apply any R function on a rolling windows. The package eases work with equally and unequally spaced time series.
Author: Dawid Kałędkowski [aut, cre] (<https://orcid.org/0000-0001-9533-457X>)
Maintainer: Dawid Kałędkowski <dawid.kaledkowski@gmail.com>

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Package easyPSID updated to version 0.1.2 with previous version 0.1.1 dated 2020-02-16

Title: Reading, Formatting, and Organizing the Panel Study of Income Dynamics (PSID)
Description: Provides various functions for reading and preparing the Panel Study of Income Dynamics (PSID) for longitudinal analysis, including functions that read the PSID's fixed width format files directly into R, rename all of the PSID's longitudinal variables so that recurring variables have consistent names across years, simplify assembling longitudinal datasets from cross sections of the PSID Family Files, and export the resulting PSID files into file formats common among other statistical programming languages ('SAS', 'STATA', and 'SPSS').
Author: Brian Aronson [aut, cre]
Maintainer: Brian Aronson <bdaronson@gmail.com>

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Package UKFE updated to version 0.1.8 with previous version 0.1.7 dated 2021-06-11

Title: UK Flood Estimation
Description: Functions to implement the methods of the Flood Estimation Handbook (FEH), associated updates and the revitalised flood hydrograph model (ReFH). Currently the package uses NRFA peak flow dataset version 10. Aside from FEH functionality, further hydrological functions are available. Most of the methods implemented in this package are described in one or more of the following: "Flood Estimation Handbook", Centre for Ecology & Hydrology (1999, ISBN:0 948540 94 X). "Flood Estimation Handbook Supplementary Report No. 1", Kjeldsen (2007, ISBN:0 903741 15 7). "Regional Frequency Analysis - an approach based on L-moments", Hosking & Wallis (1997, ISBN: 978 0 521 01940 8). "Proposal of the extreme rank plot for extreme value analysis: with an emphasis on flood frequency studies", Hammond (2019, <doi:10.2166/nh.2019.157>). "Making better use of local data in flood frequency estimation", Environment Agency (2017, ISBN: 978 1 84911 387 8). "Improving the FEH statistical procedures for flood frequency estimation", Environment Agency (2008, ISBN: 978 1 84432 920 5). "Low flow estimation in the United Kingdom", Institute of Hydrology (1992, ISBN 0 948540 45 1). Wallingford HydroSolutions, (2016, <http://software.hydrosolutions.co.uk/winfap4/Urban-Adjustment-Procedure-Technical-Note.pdf>). Data from the UK National River Flow Archive (<https://nrfa.ceh.ac.uk/>, terms and conditions: <https://nrfa.ceh.ac.uk/costs-terms-and-conditions>.
Author: Anthony Hammond
Maintainer: Anthony Hammond <agqhammond@gmail.com>

Diff between UKFE versions 0.1.7 dated 2021-06-11 and 0.1.8 dated 2021-10-03

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Package see updated to version 0.6.8 with previous version 0.6.7 dated 2021-08-23

Title: Visualisation Toolbox for 'easystats' and Extra Geoms, Themes and Color Palettes for 'ggplot2'
Description: Provides plotting utilities supporting easystats-packages (<https://github.com/easystats/easystats>) and some extra themes, geoms, and scales for 'ggplot2'. Color scales are based on <https://materialui.co/colors>.
Author: Daniel Lüdecke [aut, cre] (<https://orcid.org/0000-0002-8895-3206>, @strengejacke), Dominique Makowski [aut, inv] (<https://orcid.org/0000-0001-5375-9967>, @Dom_Makowski), Indrajeet Patil [aut, ctb] (<https://orcid.org/0000-0003-1995-6531>, @patilindrajeets), Mattan S. Ben-Shachar [aut, ctb] (<https://orcid.org/0000-0002-4287-4801>, @mattansb), Brenton M. Wiernik [aut, ctb] (<https://orcid.org/0000-0001-9560-6336>), Philip Waggoner [aut, ctb] (<https://orcid.org/0000-0002-7825-7573>), Jeffrey R. Stevens [ctb] (<https://orcid.org/0000-0003-2375-1360>), Matthew Smith [rev] (@SmithMatt90), Jakob Bossek [rev] (@BossekJakob)
Maintainer: Daniel Lüdecke <d.luedecke@uke.de>

Diff between see versions 0.6.7 dated 2021-08-23 and 0.6.8 dated 2021-10-03

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Package DoseFinding updated to version 1.0-2 with previous version 1.0-1 dated 2021-06-25

Title: Planning and Analyzing Dose Finding Experiments
Description: The DoseFinding package provides functions for the design and analysis of dose-finding experiments (with focus on pharmaceutical Phase II clinical trials). It provides functions for: multiple contrast tests, fitting non-linear dose-response models (using Bayesian and non-Bayesian estimation), calculating optimal designs and an implementation of the MCPMod methodology (Pinheiro et al. (2014) <doi:10.1002/sim.6052>).
Author: Bjoern Bornkamp [aut, cre] (<https://orcid.org/0000-0002-6294-8185>), Jose Pinheiro [aut], Frank Bretz [aut], Ludger Sandig [aut]
Maintainer: Bjoern Bornkamp <bbnkmp@mail.de>

Diff between DoseFinding versions 1.0-1 dated 2021-06-25 and 1.0-2 dated 2021-10-03

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Package icecream updated to version 0.2.0 with previous version 0.1.1 dated 2021-05-31

Title: Print Debugging Made Sweeter
Description: Provides user-friendly and configurable print debugging via a single function, ic(). Wrap an expression in ic() to print the expression, its value and (where available) its source location. Debugging output can be toggled globally without modifying code.
Author: Lewin Appleton-Fox [aut, cre], Dominik Rafacz [aut] (<https://orcid.org/0000-0003-0925-1909>), Ben Stiles [ctb]
Maintainer: Lewin Appleton-Fox <lewin.a.f@gmail.com>

Diff between icecream versions 0.1.1 dated 2021-05-31 and 0.2.0 dated 2021-10-03

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New package framecleaner with initial version 0.1.0
Package: framecleaner
Title: Clean Data Frames
Version: 0.1.0
Maintainer: Harrison Tietze <Harrison4192@gmail.com>
Description: Provides a friendly interface for modifying data frames with a sequence of piped commands built upon the 'tidyverse' Wickham et al., (2019) <doi:10.21105/joss.01686> . The majority of commands wrap 'dplyr' mutate statements in a convenient way to concisely solve common issues that arise when tidying small to medium data sets. Includes smart defaults and allows flexible selection of columns via 'tidyselect'.
License: MIT + file LICENSE
Encoding: UTF-8
Imports: dplyr, stringr, stringi, tidyselect, purrr, janitor, rlang, lubridate, magrittr, tibble, rstudioapi, tidyr, forcats, bit64, rio, readr, vroom, readxl, fs, rlist, printr
Suggests: knitr, rmarkdown, badger
VignetteBuilder: knitr
URL: https://github.com/Harrison4192/framecleaner, https://harrison4192.github.io/framecleaner/
BugReports: https://github.com/Harrison4192/framecleaner/issues
NeedsCompilation: no
Packaged: 2021-10-01 10:49:33 UTC; Harrison
Author: Harrison Tietze [aut, cre]
Repository: CRAN
Date/Publication: 2021-10-03 09:10:02 UTC

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New package ARTofR with initial version 0.2.2
Package: ARTofR
Title: Who Ever Care About the [Art of R] Scripts?
Version: 0.2.2
Description: Decorate your comments and keep them neat! Please check <https://github.com/Hzhang-ouce/ARTofR> for instructions.
License: MIT + file LICENSE
Encoding: UTF-8
Imports: bannerCommenter, clipr, methods
Suggests: rmarkdown, knitr
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2021-10-01 12:59:24 UTC; Huanyuan
Author: Huanyuan Zhang [aut, cre] (<https://orcid.org/0000-0003-4801-8771>)
Maintainer: Huanyuan Zhang <hyzhang1996@gmail.com>
Repository: CRAN
Date/Publication: 2021-10-03 09:10:05 UTC

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Package mwTensor updated to version 0.99.2 with previous version 0.99.1 dated 2021-09-22

Title: Multi-Way Component Analysis
Description: For single tensor data, any matrix factorization method can be specified the matricised tensor in each dimension by Multi-way Component Analysis (MWCA). An originally extended MWCA is also implemented to specify and decompose multiple matrices and tensors simultaneously (CoupledMWCA). See the reference section of GitHub README.md <https://github.com/rikenbit/mwTensor>, for details of the methods.
Author: Koki Tsuyuzaki [aut, cre]
Maintainer: Koki Tsuyuzaki <k.t.the-answer@hotmail.co.jp>

Diff between mwTensor versions 0.99.1 dated 2021-09-22 and 0.99.2 dated 2021-10-03

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New package hierbase with initial version 0.0.4
Package: hierbase
Title: Enabling Hierarchical Multiple Testing
Version: 0.0.4
Description: Implementation of hierarchical inference based on Renaux and Bühlmann (2021) 'Efficient Multiple Testing Adjustment for Hierarchical Inference' <arXiv:2104.15028>. The R-package hierbase offers tools to perform hierarchical inference for one or multiple data sets based on ready-to-use (group) test functions or alternatively a user specified (group) test function. The procedure is based on an efficient hierarchical multiple testing correction and controls the family-wise error rate (FWER). The functions can easily be run in parallel. Hierarchical inference can be applied to (low- or) high-dimensional data sets to find significant groups or single variables (depending on the signal strength and correlation structure) in a data-driven and automated procedure. Possible applications can for example be found in statistical genetics and statistical genomics.
License: GPL-3
Encoding: UTF-8
Depends: R (>= 4.0.0)
Imports: glmnet, hdi, methods, parallel, stats, SIHR
Suggests: knitr, MASS, testthat
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2021-09-30 20:54:49 UTC; renauxc
Author: Claude Renaux [aut, cre], Peter Bühlmann [ths]
Maintainer: Claude Renaux <renaux@stat.math.ethz.ch>
Repository: CRAN
Date/Publication: 2021-10-03 08:30:02 UTC

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New package EventWinRatios with initial version 0.1.0
Package: EventWinRatios
Title: Event-Specific Win Ratios for Terminal and Non-Terminal Events
Version: 0.1.0
Maintainer: Daewoo Pak <dpak@yonsei.ac.kr>
Description: Provides several confidence interval and testing procedures using event-specific win ratios for semi-competing risks data with non-terminal and terminal events, as developed in Yang et al. (2021, preprint). Compared with conventional methods for survival data, these procedures are designed to utilize more data for improved inference procedures with semi-competing risks data. The event-specific win ratios were introduced in Yang and Troendle (2021<doi:10.1177/1740774520972408>). In this package, the event-specific win ratios and confidence intervals are obtained for each event type, and several testing procedures are developed for the global null of no treatment effect on either terminal or non-terminal events. Furthermore, a test of proportional hazard assumptions, under which the event-specific win ratios converge to the hazard ratios, and a test of equal hazard ratios are provided. For summarizing the treatment effect on all events, confidence intervals for linear combinations of the event-specific win ratios are available using pre-determined or data-driven weights. Asymptotic properties of these inference procedures are discussed in Yang et al (2021, preprint). Also, transformations are used to yield better control of the type one error rates for moderately sized data sets.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
NeedsCompilation: no
Packaged: 2021-10-01 08:43:02 UTC; heavy
Author: Daewoo Pak [aut, cre], Song Yang [aut]
Repository: CRAN
Date/Publication: 2021-10-03 08:50:05 UTC

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New package edcpR with initial version 1.0.1
Package: edcpR
Title: Ecological Data Collection and Processing Package
Version: 1.0.1
Description: This is the course package for the exercise portion of the "Ecological Data Collection and Processing" course.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
Depends: R (>= 2.10)
NeedsCompilation: no
Packaged: 2021-10-01 08:19:16 UTC; u0134601
Author: Ward Fonteyn [aut, cre]
Maintainer: Ward Fonteyn <ward.fonteyn@kuleuven.be>
Repository: CRAN
Date/Publication: 2021-10-03 08:50:02 UTC

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Package matsindf updated to version 0.3.9 with previous version 0.3.8 dated 2021-09-03

Title: Matrices in Data Frames
Description: Provides functions to collapse a tidy data frame into matrices in a data frame and expand a data frame of matrices into a tidy data frame.
Author: Matthew Heun [aut, cre] (<https://orcid.org/0000-0002-7438-214X>)
Maintainer: Matthew Heun <matthew.heun@me.com>

Diff between matsindf versions 0.3.8 dated 2021-09-03 and 0.3.9 dated 2021-10-03

 DESCRIPTION                       |   10 +++++-----
 MD5                               |   19 ++++++++++---------
 NAMESPACE                         |    1 +
 NEWS.md                           |   18 +++++++++++++++++-
 R/utilities.R                     |   29 ++++++++++++++++++++++++++++-
 inst/CITATION                     |    4 ++--
 inst/doc/matsindf.html            |    4 ++--
 inst/doc/midf_apply_primer.html   |    4 ++--
 man/df_to_msg.Rd                  |only
 man/group_by_everything_except.Rd |    2 +-
 tests/testthat/test-utilities.R   |    6 ++++++
 11 files changed, 74 insertions(+), 23 deletions(-)

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Package batchr updated to version 0.0.2 with previous version 0.0.1 dated 2021-02-16

Title: Batch Process Files
Description: Processes multiple files with a user-supplied function. The key design principle is that only files which were last modified before the directory was configured are processed. A hidden file stores the configuration time and function etc while successfully processed files are automatically touched to update their modification date. As a result batch processing can be stopped and restarted and any files created (or modified or deleted) during processing are ignored.
Author: Joe Thorley [cre, aut] (<https://orcid.org/0000-0002-7683-4592>), Audrey Beliveau [ctb], Ayla Pearson [ctb] (<https://orcid.org/0000-0001-7388-1222>), Poisson Consulting [cph, fnd]
Maintainer: Joe Thorley <joe@poissonconsulting.ca>

Diff between batchr versions 0.0.1 dated 2021-02-16 and 0.0.2 dated 2021-10-03

 DESCRIPTION                     |   33 +--
 MD5                             |   39 +--
 NEWS.md                         |    7 
 README.md                       |    7 
 build/vignette.rds              |binary
 inst/doc/batchr.html            |  410 ++++++++++------------------------------
 man/batchr-package.Rd           |   18 -
 man/figures                     |only
 tests/testthat/test-cleanup.R   |    2 
 tests/testthat/test-completed.R |    2 
 tests/testthat/test-config.R    |    2 
 tests/testthat/test-demo.R      |    2 
 tests/testthat/test-files.R     |    2 
 tests/testthat/test-is-clean.R  |    2 
 tests/testthat/test-process.R   |    2 
 tests/testthat/test-read.R      |    2 
 tests/testthat/test-reconfig.R  |    2 
 tests/testthat/test-report.R    |    2 
 tests/testthat/test-run.R       |    2 
 tests/testthat/test-seeds.R     |    2 
 tests/testthat/test-status.R    |    5 
 21 files changed, 172 insertions(+), 371 deletions(-)

More information about batchr at CRAN
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