Title: Generating Multi-State Survival Data
Description: Generation of survival data with one (binary)
time-dependent covariate. Generation of survival data arising
from a progressive illness-death model.
Author: Artur Araujo [aut, cre] (<https://orcid.org/0000-0003-1419-4208>),
Luis Meira-Machado [aut] (<https://orcid.org/0000-0002-8577-7665>),
Susana Faria [aut] (<https://orcid.org/0000-0001-8014-9902>)
Maintainer: Artur Araujo <artur.stat@gmail.com>
Diff between genSurv versions 1.0.3 dated 2015-11-09 and 1.0.4 dated 2021-10-19
DESCRIPTION | 49 ++++++++++++++++++++------- MD5 | 32 ++++++++++------- NAMESPACE | 2 - R/dgBIV.R | 4 +- README.md |only build |only inst/CITATION | 30 ++++++++++------ inst/NEWS.Rd | 88 +++++++++++++++++++++++++------------------------ man/as.CMM.Rd | 15 +++++--- man/as.TDCM.Rd | 15 +++++--- man/as.THMM.Rd | 15 +++++--- man/genCMM.Rd | 25 ++++++++----- man/genCPHM.Rd | 7 +++ man/genSurv-package.Rd | 38 +++++++++++---------- man/genTDCM.Rd | 39 ++++++++++++--------- man/genTHMM.Rd | 25 ++++++++----- src/Makevars |only src/dgBIV.h |only src/genSurv-win.def |only src/init.c |only 20 files changed, 233 insertions(+), 151 deletions(-)
Title: Deconvolution of Bulk RNA-Seq Data Based on Deep Learning
Description: Deconvolution of bulk RNA-Seq data using context-specific deconvolution models based on Deep Neural Networks using scRNA-Seq data as input. These models are able to make accurate estimates of the cell composition of bulk RNA-Seq samples from the same context using the advances provided by Deep Learning and the meaningful information provided by scRNA-Seq data. See Torroja and Sanchez-Cabo (2019) <doi:10.3389/fgene.2019.00978> for more details.
Author: Diego Mañanes [aut, cre] (<https://orcid.org/0000-0001-7247-6794>),
Carlos Torroja [aut] (<https://orcid.org/0000-0001-8914-3400>),
Fatima Sanchez-Cabo [aut] (<https://orcid.org/0000-0003-1881-1664>)
Maintainer: Diego Mañanes <dmananesc@cnic.es>
Diff between digitalDLSorteR versions 0.1.0 dated 2021-10-08 and 0.1.1 dated 2021-10-19
DESCRIPTION | 8 ++-- MD5 | 34 +++++++++--------- NEWS.md | 9 ++++- R/dnnModel.R | 1 R/loadData.R | 1 R/simBulk.R | 4 +- R/simSingleCell.R | 70 ++++++++++++++++++++++----------------- R/utils.R | 1 README.md | 8 +++- build/partial.rdb |binary inst/doc/newModels.html | 66 ++++++++++++++++++------------------ man/estimateZinbwaveParams.Rd | 1 man/generateBulkCellMatrix.Rd | 1 man/loadSCProfiles.Rd | 1 man/showProbPlot.Rd | 1 man/simBulkProfiles.Rd | 1 man/simSCProfiles.Rd | 1 man/trainDigitalDLSorterModel.Rd | 1 18 files changed, 123 insertions(+), 86 deletions(-)
More information about digitalDLSorteR at CRAN
Permanent link
Title: Van Westendorp Price Sensitivity Meter Analysis
Description: An implementation of the van Westendorp Price
Sensitivity Meter in R, which is a survey-based approach
to analyze consumer price preferences and sensitivity
(van Westendorp 1976, isbn:9789283100386).
Author: Max Alletsee [aut, cre]
Maintainer: Max Alletsee <max.alletsee@gmail.com>
Diff between pricesensitivitymeter versions 1.2.1 dated 2021-03-21 and 1.2.2 dated 2021-10-19
pricesensitivitymeter-1.2.1/pricesensitivitymeter/NEWS |only pricesensitivitymeter-1.2.2/pricesensitivitymeter/DESCRIPTION | 11 pricesensitivitymeter-1.2.2/pricesensitivitymeter/MD5 | 23 +- pricesensitivitymeter-1.2.2/pricesensitivitymeter/NEWS.md |only pricesensitivitymeter-1.2.2/pricesensitivitymeter/R/psm_plot.R | 10 pricesensitivitymeter-1.2.2/pricesensitivitymeter/README.md | 115 +++++----- pricesensitivitymeter-1.2.2/pricesensitivitymeter/build/vignette.rds |binary pricesensitivitymeter-1.2.2/pricesensitivitymeter/inst/doc/interpolation-in-small-samples.html | 8 pricesensitivitymeter-1.2.2/pricesensitivitymeter/inst/doc/using-weighted-data.Rmd | 2 pricesensitivitymeter-1.2.2/pricesensitivitymeter/inst/doc/using-weighted-data.html | 14 - pricesensitivitymeter-1.2.2/pricesensitivitymeter/inst/doc/visualizing-psm-results.html | 8 pricesensitivitymeter-1.2.2/pricesensitivitymeter/man/figures |only pricesensitivitymeter-1.2.2/pricesensitivitymeter/man/psm_plot.rd | 8 pricesensitivitymeter-1.2.2/pricesensitivitymeter/vignettes/using-weighted-data.Rmd | 2 14 files changed, 106 insertions(+), 95 deletions(-)
More information about pricesensitivitymeter at CRAN
Permanent link
Title: Graphical VAR for Experience Sampling Data
Description: Estimates within and between time point interactions in experience sampling data, using the Graphical vector autoregression model in combination with regularization. See also Epskamp, Waldorp, Mottus & Borsboom (2018) <doi:10.1080/00273171.2018.1454823>.
Author: Sacha Epskamp [aut, cre],
Eren Asena [ctb]
Maintainer: Sacha Epskamp <mail@sachaepskamp.com>
Diff between graphicalVAR versions 0.2.4 dated 2020-10-23 and 0.3 dated 2021-10-19
DESCRIPTION | 15 ++++++++++----- MD5 | 18 +++++++++--------- NAMESPACE | 1 + NEWS | 7 +++++++ R/Kappa.R | 8 ++++++-- R/Rothmana.R | 42 ++++++++++++++++++++++++++++++------------ R/dataPrep.R | 49 ++++++++++++++++++++++++++++++------------------- R/graphicalVAR.R | 12 ++++++++---- R/simMLgvar.R | 7 ++++--- man/graphicalVAR.Rd | 29 ++++++++++++++++++++--------- 10 files changed, 125 insertions(+), 63 deletions(-)
Title: Retrieving, Managing and Analysing Air Quality and Weather Data
for Lombardy (Italy) using ARPA Lombardia Open Database
Description: Contains functions for retrieving, managing and analysing air quality and weather data from Regione Lombardia open database (<https://www.dati.lombardia.it/>).
Data are collected by ARPA Lombardia (Lombardia Environmental Protection Agency), Italy, through its ground monitoring network.
See the webpage <https://www.arpalombardia.it/Pages/ARPA_Home_Page.aspx> for further information on ARPA Lombardia's activities and history.
Data quality (e.g. missing values, exported values, graphical mapping) has been checked involving members of the ARPA Lombardia's office for air quality control.
The package makes available observations since 1989 (for weather) and 1996 (for air quality) and are updated with daily frequency by the regional agency.
Author: Paolo Maranzano [aut, cre, cph]
(<https://orcid.org/0000-0002-9228-2759>),
Andrea Algieri [aut, cph]
Maintainer: Paolo Maranzano <pmaranzano.ricercastatistica@gmail.com>
Diff between ARPALData versions 1.2.0 dated 2021-09-12 and 1.2.1 dated 2021-10-19
DESCRIPTION | 8 +- MD5 | 36 +++++------ R/ARPALdf_Summary_map.R | 2 R/Time_aggregate.R | 7 +- R/get_ARPA_Lombardia_AQ_data_1y.R | 20 +----- R/get_ARPA_Lombardia_AQ_municipal_registry.R | 2 R/get_ARPA_Lombardia_AQ_registry.R | 2 R/get_ARPA_Lombardia_W_data.R | 4 - R/get_ARPA_Lombardia_W_data_1y.R | 78 +++++++++++++----------- R/get_ARPA_Lombardia_W_registry.R | 2 R/registry_KNN_dist.R | 8 +- R/url_dataset_year.R | 2 man/ARPALdf_Summary_map.Rd | 2 man/Time_aggregate.Rd | 7 +- man/get_ARPA_Lombardia_AQ_municipal_registry.Rd | 2 man/get_ARPA_Lombardia_AQ_registry.Rd | 2 man/get_ARPA_Lombardia_W_data.Rd | 2 man/get_ARPA_Lombardia_W_registry.Rd | 2 man/registry_KNN_dist.Rd | 5 - 19 files changed, 101 insertions(+), 92 deletions(-)
Title: Computational Geometry
Description: R interface to (some of) cddlib
(<https://github.com/cddlib/cddlib>).
Converts back and forth between two representations of a convex polytope:
as solution of a set of linear equalities and inequalities and as
convex hull of set of points and rays.
Also does linear programming and redundant generator elimination
(for example, convex hull in n dimensions). All functions can use exact
infinite-precision rational arithmetic.
Author: Charles J. Geyer <charlie@stat.umn.edu> and
Glen D. Meeden <glen@stat.umn.edu>, incorporates code from
cddlib (ver 0.94f) written by Komei Fukuda <fukuda@ifor.math.ethz.ch>
Maintainer: Charles J. Geyer <charlie@stat.umn.edu>
Diff between rcdd versions 1.2-2 dated 2019-04-22 and 1.4 dated 2021-10-19
DESCRIPTION | 15 +-- MD5 | 60 +++++++------- R/onAttach.R | 4 build/vignette.rds |binary inst/doc/vinny.R | 57 +++++++++++++ inst/doc/vinny.Rnw | 192 ++++++++++++++++++++++++++++++++++++++++++++++- inst/doc/vinny.pdf |binary man/qgram.Rd | 10 +- man/scdd.Rd | 2 tests/allfaces.Rout.save | 9 -- tests/arith.Rout.save | 9 -- tests/bar-gmp.Rout.save | 9 -- tests/bar.Rout.save | 11 +- tests/bug.Rout.save | 9 -- tests/bug2.Rout.save | 9 -- tests/chull.Rout.save | 9 -- tests/chull2.Rout.save | 11 +- tests/convert.Rout.save | 9 -- tests/fred.Rout.save | 9 -- tests/lpcdd.Rout.save | 9 -- tests/make.Rout.save | 11 +- tests/oops.Rout.save | 9 -- tests/qgram.Rout.save | 9 -- tests/qmatmult.Rout.save | 9 -- tests/qux-gmp.Rout.save | 9 -- tests/qux.Rout.save | 9 -- tests/redund.Rout.save | 9 -- tests/sammy.Rout.save | 9 -- tests/subset.Rout.save | 9 -- tests/zero.Rout.save | 9 -- vignettes/vinny.Rnw | 192 ++++++++++++++++++++++++++++++++++++++++++++++- 31 files changed, 572 insertions(+), 155 deletions(-)
Title: Superfast Likelihood Inference for Stationary Gaussian Time
Series
Description: Likelihood evaluations for stationary Gaussian time series are typically obtained via the Durbin-Levinson algorithm, which scales as O(n^2) in the number of time series observations. This package provides a "superfast" O(n log^2 n) algorithm written in C++, crossing over with Durbin-Levinson around n = 300. Efficient implementations of the score and Hessian functions are also provided, leading to superfast versions of inference algorithms such as Newton-Raphson and Hamiltonian Monte Carlo. The C++ code provides a Toeplitz matrix class packaged as a header-only library, to simplify low-level usage in other packages and outside of R.
Author: Yun Ling [aut],
Martin Lysy [aut, cre]
Maintainer: Martin Lysy <mlysy@uwaterloo.ca>
Diff between SuperGauss versions 2.0.1 dated 2020-10-03 and 2.0.2 dated 2021-10-19
DESCRIPTION | 8 MD5 | 14 build/vignette.rds |binary configure | 731 ++++++++++++++++++++++++++++++++++++++ configure.ac | 12 inst/doc/SuperGauss-quicktut.html | 51 +- man/SuperGauss-package.Rd | 2 man/Toeplitz.Rd | 7 8 files changed, 789 insertions(+), 36 deletions(-)
Title: Fast Region-Based Association Tests on Summary Statistics
Description: An adaptation of classical region/gene-based association analysis
techniques to the use of summary statistics (P values and effect sizes)
and correlations between genetic variants as input. It is a tool to perform
the most popular and efficient gene-based tests using the results of genome-wide
association (meta-)analyses without having the original genotypes and
phenotypes at hand.
Author: Nadezhda M. Belonogova <belon@bionet.nsc.ru> and
Gulnara R. Svishcheva <gulsvi@bionet.nsc.ru>
with contributions from:
Seunggeun Lee (kernel functions), Pierre Lafaye de Micheaux ('davies' method),
Minghui Wang, Yiyuan Liu, Shizhong Han (simpleM function),
Yaowu Liu (ACAT function), Thomas Lumley ('kuonen' method),
and James O. Ramsay (functional data analysis functions)
Maintainer: Nadezhda M. Belonogova <belon@bionet.nsc.ru>
Diff between sumFREGAT versions 1.2.1 dated 2021-02-28 and 1.2.2 dated 2021-10-19
sumFREGAT-1.2.1/sumFREGAT/R/FFGAS.R |only sumFREGAT-1.2.1/sumFREGAT/R/MLR.R |only sumFREGAT-1.2.1/sumFREGAT/man/FFGAS.rd |only sumFREGAT-1.2.2/sumFREGAT/ChangeLog | 5 sumFREGAT-1.2.2/sumFREGAT/DESCRIPTION | 6 sumFREGAT-1.2.2/sumFREGAT/MD5 | 39 sumFREGAT-1.2.2/sumFREGAT/NAMESPACE | 2 sumFREGAT-1.2.2/sumFREGAT/R/ACAT.R | 2 sumFREGAT-1.2.2/sumFREGAT/R/ACATO.R | 5 sumFREGAT-1.2.2/sumFREGAT/R/BT.R | 11 sumFREGAT-1.2.2/sumFREGAT/R/FLM.R | 46 - sumFREGAT-1.2.2/sumFREGAT/R/KMTest_Optimal.R | 86 +- sumFREGAT-1.2.2/sumFREGAT/R/PCA.R | 178 ++-- sumFREGAT-1.2.2/sumFREGAT/R/SKAT.R | 48 - sumFREGAT-1.2.2/sumFREGAT/R/SKATO.R | 66 - sumFREGAT-1.2.2/sumFREGAT/R/check.R | 37 sumFREGAT-1.2.2/sumFREGAT/R/genewise.R | 28 sumFREGAT-1.2.2/sumFREGAT/R/get.sumstat.R | 557 +++++++------ sumFREGAT-1.2.2/sumFREGAT/R/sumSTAAR.R |only sumFREGAT-1.2.2/sumFREGAT/R/sumchi.R | 2 sumFREGAT-1.2.2/sumFREGAT/man/gene-based_test_functions.rd | 47 - sumFREGAT-1.2.2/sumFREGAT/man/sumFREGAT-package.rd | 2 sumFREGAT-1.2.2/sumFREGAT/man/sumSTAAR.rd |only 23 files changed, 622 insertions(+), 545 deletions(-)
Title: Graph Plotting Methods, Psychometric Data Visualization and
Graphical Model Estimation
Description: Weighted network visualization and analysis, as well as Gaussian graphical model computation. See Epskamp et al. (2012) <doi:10.18637/jss.v048.i04>.
Author: Sacha Epskamp [aut, cre],
Giulio Costantini [aut],
Jonas Haslbeck [aut],
Adela Isvoranu [aut],
Angelique O. J. Cramer [ctb],
Lourens J. Waldorp [ctb],
Verena D. Schmittmann [ctb],
Denny Borsboom [ctb]
Maintainer: Sacha Epskamp <mail@sachaepskamp.com>
Diff between qgraph versions 1.6.9 dated 2021-01-28 and 1.9 dated 2021-10-19
DESCRIPTION | 8 ++++---- MD5 | 22 +++++++++++----------- NEWS | 16 ++++++++++++++++ R/centralityFunctions.R | 13 ++++++++++++- R/centralityPlot.R | 2 +- R/clusteringPlot.R | 2 +- R/cor_auto.R | 4 ++-- R/qgraph.R | 28 ++++++++++++++++++++++------ R/vein.R | 15 ++++++++++++++- man/CentAndClusfuns.Rd | 4 ++-- man/qgraph.Rd | 12 +----------- man/qgraph_loadings.Rd | 10 ++++++---- 12 files changed, 92 insertions(+), 44 deletions(-)
Title: Ensemble Algorithms for Time Series Forecasting with Modeltime
Description: A 'modeltime' extension that implements time series ensemble forecasting methods including model averaging,
weighted averaging, and stacking. These techniques are popular methods
to improve forecast accuracy and stability. Refer to papers such as
"Machine-Learning Models for Sales Time Series Forecasting" Pavlyshenko, B.M. (2019) <doi:10.3390>.
Author: Matt Dancho [aut, cre],
Business Science [cph]
Maintainer: Matt Dancho <mdancho@business-science.io>
Diff between modeltime.ensemble versions 0.4.2 dated 2021-07-16 and 1.0.0 dated 2021-10-19
DESCRIPTION | 15 +++--- MD5 | 28 ++++++++---- NAMESPACE | 4 + NEWS.md | 14 ++++++ R/00_global_variables.R | 3 - R/nested_ensemble_average.R |only R/nested_ensemble_weighted.R |only R/utils-parallel_processing.R |only README.md | 6 +- build/vignette.rds |binary inst/doc/getting-started-with-modeltime-ensemble.html | 12 +---- inst/doc/nested-ensembles.R |only inst/doc/nested-ensembles.Rmd |only inst/doc/nested-ensembles.html |only inst/doc/recursive-ensembles.html | 12 ++--- man/ensemble_nested_average.Rd |only man/ensemble_nested_weighted.Rd |only tests/testthat/test-ensemble_model_spec.R | 42 +++++++----------- tests/testthat/test-nested-ensembles.R |only vignettes/nested-ensembles.Rmd |only 20 files changed, 77 insertions(+), 59 deletions(-)
More information about modeltime.ensemble at CRAN
Permanent link
Title: Language Server Protocol
Description: An implementation of the Language Server Protocol
for R. The Language Server protocol is used by an editor client to
integrate features like auto completion. See
<https://microsoft.github.io/language-server-protocol/> for details.
Author: Randy Lai [aut, cre],
Kun Ren [ctb]
Maintainer: Randy Lai <randy.cs.lai@gmail.com>
Diff between languageserver versions 0.3.11 dated 2021-07-22 and 0.3.12 dated 2021-10-19
languageserver-0.3.11/languageserver/man/document_code_action_reply.Rd |only languageserver-0.3.12/languageserver/DESCRIPTION | 17 - languageserver-0.3.12/languageserver/MD5 | 39 +- languageserver-0.3.12/languageserver/NEWS.md | 17 + languageserver-0.3.12/languageserver/R/completion.R | 14 languageserver-0.3.12/languageserver/R/definition.R | 8 languageserver-0.3.12/languageserver/R/document.R | 2 languageserver-0.3.12/languageserver/R/handlers-langfeatures.R | 4 languageserver-0.3.12/languageserver/R/hover.R | 15 languageserver-0.3.12/languageserver/R/namespace.R | 2 languageserver-0.3.12/languageserver/R/signature.R | 4 languageserver-0.3.12/languageserver/R/utils.R | 45 ++ languageserver-0.3.12/languageserver/R/workspace.R | 4 languageserver-0.3.12/languageserver/README.md | 34 +- languageserver-0.3.12/languageserver/tests/testthat/helper-utils.R | 95 +++--- languageserver-0.3.12/languageserver/tests/testthat/test-completion.R | 71 ++++ languageserver-0.3.12/languageserver/tests/testthat/test-definition.R | 74 ++++ languageserver-0.3.12/languageserver/tests/testthat/test-hover.R | 153 +++++++++- languageserver-0.3.12/languageserver/tests/testthat/test-link.R | 136 ++++++++ languageserver-0.3.12/languageserver/tests/testthat/test-signature.R | 19 + languageserver-0.3.12/languageserver/tests/testthat/test-workspace.R | 2 21 files changed, 650 insertions(+), 105 deletions(-)
More information about languageserver at CRAN
Permanent link
Title: Fair Data Adaptation with Quantile Preservation
Description: An implementation of the fair data adaptation with quantile
preservation described in Plecko & Meinshausen (2019) <arXiv:1911.06685>.
The adaptation procedure uses the specified causal graph to pre-process the
given training and testing data in such a way to remove the bias caused by
the protected attribute. The procedure uses tree ensembles for quantile
regression.
Author: Drago Plecko [aut, cre],
Nicolas Bennett [aut]
Maintainer: Drago Plecko <drago.plecko@stat.math.ethz.ch>
Diff between fairadapt versions 0.2.0 dated 2021-07-28 and 0.2.1 dated 2021-10-19
fairadapt-0.2.0/fairadapt/tests/PSCF |only fairadapt-0.2.0/fairadapt/tests/benchmarking |only fairadapt-0.2.0/fairadapt/tests/hidden |only fairadapt-0.2.0/fairadapt/tests/real-data |only fairadapt-0.2.0/fairadapt/vignettes/jss.fdb_latexmk |only fairadapt-0.2.0/fairadapt/vignettes/jss.fls |only fairadapt-0.2.0/fairadapt/vignettes/jss_files/figure-latex/census-adapt-1.pdf |only fairadapt-0.2.0/fairadapt/vignettes/jss_files/figure-latex/graph-semimarkov-1.pdf |only fairadapt-0.2.0/fairadapt/vignettes/jss_files/figure-latex/log-and-graph-1.pdf |only fairadapt-0.2.0/fairadapt/vignettes/jss_files/figure-latex/mat-1.pdf |only fairadapt-0.2.0/fairadapt/vignettes/jss_files/figure-latex/resolving-graph-1.pdf |only fairadapt-0.2.0/fairadapt/vignettes/jss_files/figure-latex/vis-diff-1.pdf |only fairadapt-0.2.1/fairadapt/DESCRIPTION | 21 fairadapt-0.2.1/fairadapt/MD5 | 125 - fairadapt-0.2.1/fairadapt/NEWS.md | 5 fairadapt-0.2.1/fairadapt/R/checks.R | 18 fairadapt-0.2.1/fairadapt/R/data.R | 2 fairadapt-0.2.1/fairadapt/R/fairadapt.R | 6 fairadapt-0.2.1/fairadapt/R/generics.R | 15 fairadapt-0.2.1/fairadapt/R/graphs.R | 4 fairadapt-0.2.1/fairadapt/README.md | 4 fairadapt-0.2.1/fairadapt/build/vignette.rds |binary fairadapt-0.2.1/fairadapt/inst/doc/jss.R | 358 ++- fairadapt-0.2.1/fairadapt/inst/doc/jss.Rmd | 901 ++++++---- fairadapt-0.2.1/fairadapt/inst/doc/jss.pdf |binary fairadapt-0.2.1/fairadapt/man/fairTwins.Rd | 2 fairadapt-0.2.1/fairadapt/man/fairadapt.Rd | 5 fairadapt-0.2.1/fairadapt/man/gov_census.Rd | 2 fairadapt-0.2.1/fairadapt/tests/testthat/_snaps/generics/auto_cts.png |binary fairadapt-0.2.1/fairadapt/tests/testthat/_snaps/generics/auto_rf.png |binary fairadapt-0.2.1/fairadapt/tests/testthat/_snaps/generics/ftdef_cts.csv | 99 + fairadapt-0.2.1/fairadapt/tests/testthat/_snaps/generics/ftdef_lin.csv | 99 + fairadapt-0.2.1/fairadapt/tests/testthat/_snaps/generics/ftdef_rf.csv | 99 + fairadapt-0.2.1/fairadapt/tests/testthat/_snaps/generics/plot_cts.png |binary fairadapt-0.2.1/fairadapt/tests/testthat/_snaps/generics/plot_rf.png |binary fairadapt-0.2.1/fairadapt/tests/testthat/helpers.R | 9 fairadapt-0.2.1/fairadapt/tests/testthat/test-checks.R | 2 fairadapt-0.2.1/fairadapt/tests/testthat/test-generics.R | 6 fairadapt-0.2.1/fairadapt/vignettes/jss.Rmd | 901 ++++++---- fairadapt-0.2.1/fairadapt/vignettes/jss.bib | 297 ++- fairadapt-0.2.1/fairadapt/vignettes/jss_cache |only fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/before-adapt-1.pdf |only fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/census-graph-1.pdf |binary fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/census-tikz-1.pdf |only fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/census-tikz-1.png |only fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/fairtwin-plot-1.pdf |only fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/graph-plot-1.pdf |only fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/rel-edu-1.pdf |only fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/rel-edu-1.png |only fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/res-graph-1.pdf |only fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/semi-graph-1.pdf |only fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/semi-markov-1.pdf |only fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/semi-markov-1.png |only fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/uni-adm-1.pdf |only fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/uni-adm-1.png |only fairadapt-0.2.1/fairadapt/vignettes/jss_files/figure-latex/vis-adapt-1.pdf |binary 56 files changed, 1945 insertions(+), 1035 deletions(-)
Title: Build and Run Spatially Explicit Agent-Based Models
Description: Build and run spatially explicit
agent-based models using only the R platform. 'NetLogoR' follows the same
framework as the 'NetLogo' software
(Wilensky, 1999 <http://ccl.northwestern.edu/netlogo/>) and is a translation
in R of the structure and functions of 'NetLogo'.
'NetLogoR' provides new R classes to define model agents and functions to
implement spatially explicit agent-based models in the R environment.
This package allows benefiting of the fast and easy coding phase from the
highly developed 'NetLogo' framework, coupled with the versatility, power
and massive resources of the R software.
Examples of three models (Ants <http://ccl.northwestern.edu/netlogo/models/Ants>,
Butterfly (Railsback and Grimm, 2012) and Wolf-Sheep-Predation
<http://ccl.northwestern.edu/netlogo/models/WolfSheepPredation>) written using
'NetLogoR' are available. The 'NetLogo' code of the original version of these
models is provided alongside.
A programming guide inspired from the 'NetLogo' Programming Guide
(<https://ccl.northwestern.edu/netlogo/docs/programming.html>) and a dictionary
of 'NetLogo' primitives (<https://ccl.northwestern.edu/netlogo/docs/dictionary.html>)
equivalences are also available.
NOTE: To increment 'time', these functions can use a for loop or can be
integrated with a discrete event simulator, such as 'SpaDES'
(<https://cran.r-project.org/package=SpaDES>).
The suggested package 'fastshp' can be installed with
'install.packages("fastshp", repos = "https://rforge.net", type = "source")'.
Author: Sarah Bauduin [aut] (<https://orcid.org/0000-0002-3252-5894>),
Eliot J B McIntire [aut, cre] (<https://orcid.org/0000-0002-6914-8316>),
Alex M Chubaty [aut] (<https://orcid.org/0000-0001-7146-8135>),
Her Majesty the Queen in Right of Canada, as represented by the
Minister of Natural Resources Canada [cph]
Maintainer: Eliot J B McIntire <eliot.mcintire@canada.ca>
Diff between NetLogoR versions 0.3.8 dated 2021-07-10 and 0.3.9 dated 2021-10-19
DESCRIPTION | 12 ++--- MD5 | 26 +++++------ NAMESPACE | 1 NEWS.md | 8 +++ R/NetLogoR-package.R | 10 +++- R/world-functions.R | 78 ++++++++++------------------------ R/worldNLR-classes-methods.R | 12 ++++- README.md | 7 +-- build/vignette.rds |binary inst/doc/ProgrammingGuide.html | 24 +++++----- man/projNowhere.Rd | 5 ++ man/raster2world.Rd | 23 +++++----- man/stackWorlds.Rd | 7 ++- tests/testthat/test-world-functions.R | 12 ++++- 14 files changed, 119 insertions(+), 106 deletions(-)
Title: Langevin Analysis in One and Two Dimensions
Description: Estimate drift and diffusion functions from time series and
generate synthetic time series from given drift and diffusion coefficients.
Author: Philip Rinn [aut, cre],
Pedro G. Lind [aut],
David Bastine [ctb]
Maintainer: Philip Rinn <philip.rinn@uni-oldenburg.de>
Diff between Langevin versions 1.3.0 dated 2021-10-18 and 1.3.1 dated 2021-10-19
ChangeLog | 4 ++++ DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- inst/doc/Langevin.pdf |binary src/Makevars | 6 ------ src/Makevars.win | 12 +----------- 6 files changed, 14 insertions(+), 26 deletions(-)
Title: Download, Edit and Include Wind and Sea Currents Data in
Ecological and Evolutionary Analysis
Description: Tools for download and manage surface wind and sea currents data from the Global Forecasting System <https://www.ncei.noaa.gov/products/weather-climate-models/global-forecast> and to compute connectivity between locations.
Author: Javier Fernández-López [aut, cre],
Klaus Schliep [aut],
Yurena Arjona [aut]
Maintainer: Javier Fernández-López <jflopez.bio@gmail.com>
Diff between rWind versions 1.1.5 dated 2020-02-17 and 1.1.7 dated 2021-10-19
DESCRIPTION | 16 MD5 | 53 +- NEWS | 16 R/rWind-package.R | 14 R/wind_functions2.R | 869 +++++++++++++++++++++++-------------------- README.md | 122 +++++- build/vignette.rds |binary inst/WORDLIST |only inst/doc/Shortest_paths.R | 16 inst/doc/Shortest_paths.Rmd | 2 inst/doc/Shortest_paths.html | 258 ++++++++---- man/arrowDir.Rd | 11 man/flow.dispersion.Rd | 17 man/flow.dispersion_int.Rd | 16 man/rWind-package.Rd | 10 man/seaOscar.dl.Rd | 23 - man/tidy.rWind_series.Rd | 5 man/uv2ds.Rd | 11 man/wind.data.Rd | 9 man/wind.dl.Rd | 30 - man/wind.dl_2.Rd | 32 - man/wind.fit_int.Rd | 6 man/wind.mean.Rd | 10 man/wind.series.Rd | 8 man/wind2raster.Rd | 5 man/wind2raster_int.Rd | 4 tests/testthat/test_rWind.R | 31 - vignettes/Shortest_paths.Rmd | 2 28 files changed, 921 insertions(+), 675 deletions(-)
Title: Access, Retrieve, and Work with Canadian Census Data and
Geography
Description: Integrated, convenient, and uniform access to Canadian
Census data and geography retrieved using the 'CensusMapper' API. This package produces analysis-ready
tidy data frames and spatial data in multiple formats, as well as convenience functions
for working with Census variables, variable hierarchies, and region selection. API
keys are freely available with free registration at <https://censusmapper.ca/api>.
Census data and boundary geometries are reproduced and distributed on an "as
is" basis with the permission of Statistics Canada (Statistics Canada 2001; 2006;
2011; 2016).
Author: Jens von Bergmann [aut] (API creator and maintainer),
Dmitry Shkolnik [aut, cre] (Package maintainer, responsible for
correspondence),
Aaron Jacobs [aut]
Maintainer: Dmitry Shkolnik <shkolnikd@gmail.com>
Diff between cancensus versions 0.4.3 dated 2021-06-08 and 0.4.4 dated 2021-10-19
DESCRIPTION | 6 MD5 | 48 NEWS.md | 5 build/vignette.rds |binary inst/doc/Dwellings_by_document_type_cross_tabulation.html | 339 inst/doc/Making_maps_with_cancensus.R | 7 inst/doc/Making_maps_with_cancensus.Rmd | 7 inst/doc/Making_maps_with_cancensus.html | 5062 -------------- inst/doc/Taxfiler_Data.R | 8 inst/doc/Taxfiler_Data.Rmd | 8 inst/doc/Taxfiler_Data.html | 389 - inst/doc/cancensus.R | 9 inst/doc/cancensus.Rmd | 9 inst/doc/cancensus.html | 484 - inst/doc/data_discovery.R | 15 inst/doc/data_discovery.Rmd | 15 inst/doc/data_discovery.html | 1736 ---- inst/doc/intersecting_geometries.R | 8 inst/doc/intersecting_geometries.Rmd | 8 inst/doc/intersecting_geometries.html | 321 vignettes/Making_maps_with_cancensus.Rmd | 7 vignettes/Taxfiler_Data.Rmd | 8 vignettes/cancensus.Rmd | 9 vignettes/data_discovery.Rmd | 15 vignettes/intersecting_geometries.Rmd | 8 25 files changed, 745 insertions(+), 7786 deletions(-)
Title: Rare Variant Analysis and Genetic Simulations
Description: Rare variant association tests: burden tests (Bocher et al. 2019 <doi:10.1002/gepi.22210>) and the Sequence Kernel Association Test (Bocher et al. 2021 <doi:10.1038/s41431-020-00792-8>) in the whole genome; and genetic simulations.
Author: Ozvan Bocher and Hervé Perdry
Maintainer: Ozvan Bocher <bocherozvan@gmail.com>
Diff between Ravages versions 0.1.5 dated 2021-05-12 and 1.0.0 dated 2021-10-19
Ravages-0.1.5/Ravages/R/random_bed_matrix.r |only Ravages-0.1.5/Ravages/man/random.bed.matrix.Rd |only Ravages-1.0.0/Ravages/DESCRIPTION | 12 Ravages-1.0.0/Ravages/MD5 | 102 ++- Ravages-1.0.0/Ravages/NAMESPACE | 19 Ravages-1.0.0/Ravages/NEWS | 21 Ravages-1.0.0/Ravages/R/CAST.r | 16 Ravages-1.0.0/Ravages/R/RAVA_FIRST.r |only Ravages-1.0.0/Ravages/R/adjustedCADD_annotation.r |only Ravages-1.0.0/Ravages/R/burden.r | 6 Ravages-1.0.0/Ravages/R/burden_continuous.r | 25 Ravages-1.0.0/Ravages/R/burden_continuous_subscores.r |only Ravages-1.0.0/Ravages/R/burden_mlogit.r | 18 Ravages-1.0.0/Ravages/R/burden_mlogit_subscores.r |only Ravages-1.0.0/Ravages/R/burden_subscores.r |only Ravages-1.0.0/Ravages/R/filter_adjustedCADD.r |only Ravages-1.0.0/Ravages/R/filter_rare_variants.r | 19 Ravages-1.0.0/Ravages/R/genotypic.freq.r | 9 Ravages-1.0.0/Ravages/R/or_matrix_fix.r | 10 Ravages-1.0.0/Ravages/R/or_matrix_fix_same_variant.r | 10 Ravages-1.0.0/Ravages/R/random_bed_matrix_haplo.r | 30 - Ravages-1.0.0/Ravages/R/rbm_GRR.r |only Ravages-1.0.0/Ravages/R/rbm_GRR_power.r |only Ravages-1.0.0/Ravages/R/rbm_haplos_power.r |only Ravages-1.0.0/Ravages/R/set_CADDregions.r |only Ravages-1.0.0/Ravages/R/set_genomic_region.r | 19 Ravages-1.0.0/Ravages/R/set_genomic_region_subregion.r |only Ravages-1.0.0/Ravages/data/Subregions_LCT_example.RData |only Ravages-1.0.0/Ravages/data/datalist | 1 Ravages-1.0.0/Ravages/data/genes.b37.RData |binary Ravages-1.0.0/Ravages/data/genes.b38.RData |binary Ravages-1.0.0/Ravages/inst/doc/Ravages_Simulations_vignette.R | 72 -- Ravages-1.0.0/Ravages/inst/doc/Ravages_Simulations_vignette.Rmd | 139 ++--- Ravages-1.0.0/Ravages/inst/doc/Ravages_Simulations_vignette.html | 157 ++--- Ravages-1.0.0/Ravages/inst/doc/Ravages_vignette.R | 102 ++- Ravages-1.0.0/Ravages/inst/doc/Ravages_vignette.Rmd | 235 ++++++-- Ravages-1.0.0/Ravages/inst/doc/Ravages_vignette.html | 274 +++++++--- Ravages-1.0.0/Ravages/man/CAST.Rd | 7 Ravages-1.0.0/Ravages/man/GRR.matrix.Rd | 4 Ravages-1.0.0/Ravages/man/GnomADgenes.Rd | 2 Ravages-1.0.0/Ravages/man/Jaccard.Rd | 8 Ravages-1.0.0/Ravages/man/RAVA_FIRST.Rd |only Ravages-1.0.0/Ravages/man/SKAT.Rd | 9 Ravages-1.0.0/Ravages/man/adjustedCADD_annotation.Rd |only Ravages-1.0.0/Ravages/man/burden.Rd | 28 - Ravages-1.0.0/Ravages/man/burden.continuous.Rd | 15 Ravages-1.0.0/Ravages/man/burden.continuous.subscores.Rd |only Ravages-1.0.0/Ravages/man/burden.mlogit.Rd | 10 Ravages-1.0.0/Ravages/man/burden.mlogit.subscores.Rd |only Ravages-1.0.0/Ravages/man/burden.subscores.Rd |only Ravages-1.0.0/Ravages/man/burden.weighted.matrix.Rd | 2 Ravages-1.0.0/Ravages/man/filter.rare.variants.Rd | 19 Ravages-1.0.0/Ravages/man/filter_adjustedCADD.Rd |only Ravages-1.0.0/Ravages/man/genes.positions.Rd | 10 Ravages-1.0.0/Ravages/man/genotypic.freq.Rd | 9 Ravages-1.0.0/Ravages/man/rbm.GRR.Rd |only Ravages-1.0.0/Ravages/man/rbm.GRR.power.Rd |only Ravages-1.0.0/Ravages/man/rbm.haplos.power.Rd |only Ravages-1.0.0/Ravages/man/rbm.haplos.thresholds.Rd | 12 Ravages-1.0.0/Ravages/man/set.CADDregions.Rd |only Ravages-1.0.0/Ravages/man/set.genomic.region.Rd | 15 Ravages-1.0.0/Ravages/man/set.genomic.region.subregion.Rd |only Ravages-1.0.0/Ravages/man/subregions.LCT.Rd |only Ravages-1.0.0/Ravages/vignettes/Ravages_Simulations_vignette.Rmd | 139 ++--- Ravages-1.0.0/Ravages/vignettes/Ravages_vignette.Rmd | 235 ++++++-- 65 files changed, 1160 insertions(+), 660 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-10-19 3.2.0
2021-06-01 3.1.6
2021-04-27 3.1.5
2021-02-03 3.1.3
2021-01-15 3.1.2
2020-12-03 3.1.1
2020-10-28 3.1.0
2020-10-06 3.0.0
2020-09-12 2.0.1
2020-09-04 2.0.0
2020-06-23 1.1.2
2020-06-21 1.1.1
2020-05-29 1.0.0
2020-05-27 0.3.1
2020-04-11 0.3.0
2020-02-11 0.2.5
2020-02-02 0.2.0
2019-12-19 0.1.3
2019-10-24 0.1.2
2019-09-17 0.1.1
2019-08-28 0.1.0
Title: Create Tables from Different Types of Regression
Description: Create regression tables from generalized linear model(GLM), generalized estimating equation(GEE), generalized linear mixed-effects model(GLMM), Cox proportional hazards model, survey-weighted generalized linear model(svyglm) and survey-weighted Cox model results for publication.
Author: Jinseob Kim [aut, cre] (<https://orcid.org/0000-0002-9403-605X>),
Zarathu [cph, fnd]
Maintainer: Jinseob Kim <jinseob2kim@gmail.com>
Diff between jstable versions 1.0.6 dated 2021-07-25 and 1.0.7 dated 2021-10-19
DESCRIPTION | 8 +-- MD5 | 20 ++++---- NEWS.md | 4 + R/cox2.R | 4 - R/gee.R | 16 +++--- R/glmshow.R | 9 ++- R/lmer.R | 125 ++++++++++++++++++++++++-------------------------- R/svycox.R | 10 ++-- R/svyglm.R | 5 +- build/vignette.rds |binary inst/doc/jstable.html | 31 ++++++------ 11 files changed, 120 insertions(+), 112 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-05-07 6.0.2
2021-02-13 6.0.0
2021-01-08 5.0.2
2020-12-08 5.0.1
2020-12-07 5.0.0
2020-10-25 4.1.0
2020-10-05 4.0.0
2020-09-13 3.2.0
2020-06-19 3.1.0
2020-05-31 3.0.0
2020-04-11 2.0.0
2020-03-06 1.2.0
2020-02-09 1.1.0
2020-02-06 1.0.0
Title: 'ggplot2' Based Plots with Statistical Details
Description: Extension of 'ggplot2', 'ggstatsplot' creates graphics with
details from statistical tests included in the plots themselves. It
provides an easier syntax to generate information-rich plots for
statistical analysis of continuous (violin plots, scatterplots,
histograms, dot plots, dot-and-whisker plots) or categorical (pie and
bar charts) data. Currently, it supports the most common types of
statistical approaches and tests: parametric, nonparametric, robust,
and Bayesian versions of t-test/ANOVA, correlation analyses,
contingency table analysis, meta-analysis, and regression analyses.
Author: Indrajeet Patil [cre, aut, cph]
(<https://orcid.org/0000-0003-1995-6531>, @patilindrajeets)
Maintainer: Indrajeet Patil <patilindrajeet.science@gmail.com>
Diff between ggstatsplot versions 0.8.0 dated 2021-06-09 and 0.9.0 dated 2021-10-19
ggstatsplot-0.8.0/ggstatsplot/R/grouped_ggbarstats.R |only ggstatsplot-0.8.0/ggstatsplot/R/grouped_ggbetweenstats.R |only ggstatsplot-0.8.0/ggstatsplot/R/grouped_ggcorrmat.R |only ggstatsplot-0.8.0/ggstatsplot/R/grouped_ggdotplotstats.R |only ggstatsplot-0.8.0/ggstatsplot/R/grouped_gghistostats.R |only ggstatsplot-0.8.0/ggstatsplot/R/grouped_ggpiestats.R |only ggstatsplot-0.8.0/ggstatsplot/R/grouped_ggscatterstats.R |only ggstatsplot-0.8.0/ggstatsplot/R/grouped_ggwithinstats.R |only ggstatsplot-0.8.0/ggstatsplot/R/helpers_ggcoefstats_graphics.R |only ggstatsplot-0.8.0/ggstatsplot/R/helpers_grouped_functions.R |only ggstatsplot-0.8.0/ggstatsplot/R/theme_ggstatsplot.R |only ggstatsplot-0.8.0/ggstatsplot/data/VR_dilemma.rdata |only ggstatsplot-0.8.0/ggstatsplot/data/movies_wide.rdata |only ggstatsplot-0.8.0/ggstatsplot/man/VR_dilemma.Rd |only ggstatsplot-0.8.0/ggstatsplot/man/figures/README-ggcoefstats2-1.png |only ggstatsplot-0.8.0/ggstatsplot/man/figures/README-ggscatterstats3-1.png |only ggstatsplot-0.8.0/ggstatsplot/man/figures/arguments.png |only ggstatsplot-0.8.0/ggstatsplot/man/figures/ggstatsverse.jpg |only ggstatsplot-0.8.0/ggstatsplot/man/figures/lifecycle-archived.svg |only ggstatsplot-0.8.0/ggstatsplot/man/figures/lifecycle-defunct.svg |only ggstatsplot-0.8.0/ggstatsplot/man/figures/lifecycle-deprecated.svg |only ggstatsplot-0.8.0/ggstatsplot/man/figures/lifecycle-experimental.svg |only ggstatsplot-0.8.0/ggstatsplot/man/figures/lifecycle-maturing.svg |only ggstatsplot-0.8.0/ggstatsplot/man/figures/lifecycle-questioning.svg |only ggstatsplot-0.8.0/ggstatsplot/man/figures/lifecycle-stable.svg |only ggstatsplot-0.8.0/ggstatsplot/man/figures/lifecycle-superseded.svg |only ggstatsplot-0.8.0/ggstatsplot/man/ggcoefstats_label_maker.Rd |only ggstatsplot-0.8.0/ggstatsplot/man/movies_wide.Rd |only ggstatsplot-0.8.0/ggstatsplot/tests/README.md |only ggstatsplot-0.8.0/ggstatsplot/tests/testthat/Rplots.pdf |only ggstatsplot-0.8.0/ggstatsplot/vignettes/web_only/combine_plots.Rmd |only ggstatsplot-0.8.0/ggstatsplot/vignettes/web_only/effsize_interpretation.Rmd |only ggstatsplot-0.8.0/ggstatsplot/vignettes/web_only/other_resources.Rmd |only ggstatsplot-0.8.0/ggstatsplot/vignettes/web_only/session_info.Rmd |only ggstatsplot-0.9.0/ggstatsplot/DESCRIPTION | 24 ggstatsplot-0.9.0/ggstatsplot/MD5 | 316 +- ggstatsplot-0.9.0/ggstatsplot/NAMESPACE | 86 ggstatsplot-0.9.0/ggstatsplot/NEWS.md | 134 - ggstatsplot-0.9.0/ggstatsplot/R/combine_plots.R | 17 ggstatsplot-0.9.0/ggstatsplot/R/data.R | 161 - ggstatsplot-0.9.0/ggstatsplot/R/extract_stats.R | 21 ggstatsplot-0.9.0/ggstatsplot/R/ggbarstats.R | 194 - ggstatsplot-0.9.0/ggstatsplot/R/ggbetweenstats.R | 276 +- ggstatsplot-0.9.0/ggstatsplot/R/ggcoefstats.R | 239 - ggstatsplot-0.9.0/ggstatsplot/R/ggcorrmat.R | 147 - ggstatsplot-0.9.0/ggstatsplot/R/ggdotplotstats.R | 182 - ggstatsplot-0.9.0/ggstatsplot/R/gghistostats.R | 206 + ggstatsplot-0.9.0/ggstatsplot/R/ggpiestats.R | 222 + ggstatsplot-0.9.0/ggstatsplot/R/ggscatterstats.R | 342 +- ggstatsplot-0.9.0/ggstatsplot/R/ggstatsplot-package.R | 35 ggstatsplot-0.9.0/ggstatsplot/R/ggwithinstats.R | 280 +- ggstatsplot-0.9.0/ggstatsplot/R/global_vars.R | 7 ggstatsplot-0.9.0/ggstatsplot/R/helpers_ggbetweenstats_graphics.R | 161 - ggstatsplot-0.9.0/ggstatsplot/R/helpers_ggcatstats_graphics.R | 55 ggstatsplot-0.9.0/ggstatsplot/R/helpers_gghistostats_graphics.R | 15 ggstatsplot-0.9.0/ggstatsplot/R/pairwise_comparisons.R |only ggstatsplot-0.9.0/ggstatsplot/R/reexports.R | 51 ggstatsplot-0.9.0/ggstatsplot/R/utils.R |only ggstatsplot-0.9.0/ggstatsplot/README.md | 486 +--- ggstatsplot-0.9.0/ggstatsplot/build/vignette.rds |binary ggstatsplot-0.9.0/ggstatsplot/inst/WORDLIST | 31 ggstatsplot-0.9.0/ggstatsplot/inst/doc/additional.R | 2 ggstatsplot-0.9.0/ggstatsplot/inst/doc/additional.Rmd | 77 ggstatsplot-0.9.0/ggstatsplot/inst/doc/additional.html | 64 ggstatsplot-0.9.0/ggstatsplot/man/combine_plots.Rd | 13 ggstatsplot-0.9.0/ggstatsplot/man/extract_stats.Rd | 14 ggstatsplot-0.9.0/ggstatsplot/man/figures/README-ggbarstats1-1.png |binary ggstatsplot-0.9.0/ggstatsplot/man/figures/README-ggbarstats2-1.png |binary ggstatsplot-0.9.0/ggstatsplot/man/figures/README-ggbetweenstats1-1.png |binary ggstatsplot-0.9.0/ggstatsplot/man/figures/README-ggbetweenstats2-1.png |binary ggstatsplot-0.9.0/ggstatsplot/man/figures/README-ggcoefstats1-1.png |binary ggstatsplot-0.9.0/ggstatsplot/man/figures/README-ggdotplotstats1-1.png |binary ggstatsplot-0.9.0/ggstatsplot/man/figures/README-gghistostats2-1.png |binary ggstatsplot-0.9.0/ggstatsplot/man/figures/README-ggpiestats1-1.png |binary ggstatsplot-0.9.0/ggstatsplot/man/figures/README-ggpiestats2-1.png |binary ggstatsplot-0.9.0/ggstatsplot/man/figures/README-ggscatterstats1-1.png |binary ggstatsplot-0.9.0/ggstatsplot/man/figures/README-ggscatterstats2-1.png |binary ggstatsplot-0.9.0/ggstatsplot/man/figures/README-ggwithinstats1-1.png |binary ggstatsplot-0.9.0/ggstatsplot/man/figures/README-ggwithinstats2-1.png |binary ggstatsplot-0.9.0/ggstatsplot/man/figures/README-ridgeplot-1.png |binary ggstatsplot-0.9.0/ggstatsplot/man/ggbarstats.Rd | 29 ggstatsplot-0.9.0/ggstatsplot/man/ggbetweenstats.Rd | 20 ggstatsplot-0.9.0/ggstatsplot/man/ggcoefstats.Rd | 32 ggstatsplot-0.9.0/ggstatsplot/man/ggcorrmat.Rd | 23 ggstatsplot-0.9.0/ggstatsplot/man/ggdotplotstats.Rd | 16 ggstatsplot-0.9.0/ggstatsplot/man/gghistostats.Rd | 19 ggstatsplot-0.9.0/ggstatsplot/man/ggpiestats.Rd | 31 ggstatsplot-0.9.0/ggstatsplot/man/ggscatterstats.Rd | 89 ggstatsplot-0.9.0/ggstatsplot/man/ggstatsplot-package.Rd | 16 ggstatsplot-0.9.0/ggstatsplot/man/ggwithinstats.Rd | 34 ggstatsplot-0.9.0/ggstatsplot/man/grouped_ggbarstats.Rd | 93 ggstatsplot-0.9.0/ggstatsplot/man/grouped_ggbetweenstats.Rd | 96 ggstatsplot-0.9.0/ggstatsplot/man/grouped_ggcorrmat.Rd | 57 ggstatsplot-0.9.0/ggstatsplot/man/grouped_ggdotplotstats.Rd | 68 ggstatsplot-0.9.0/ggstatsplot/man/grouped_gghistostats.Rd | 21 ggstatsplot-0.9.0/ggstatsplot/man/grouped_ggpiestats.Rd | 83 ggstatsplot-0.9.0/ggstatsplot/man/grouped_ggscatterstats.Rd | 121 - ggstatsplot-0.9.0/ggstatsplot/man/grouped_ggwithinstats.Rd | 110 ggstatsplot-0.9.0/ggstatsplot/man/grouped_list.Rd | 5 ggstatsplot-0.9.0/ggstatsplot/man/movies_long.Rd | 4 ggstatsplot-0.9.0/ggstatsplot/man/pairwise_comparisons.Rd |only ggstatsplot-0.9.0/ggstatsplot/man/reexports.Rd | 10 ggstatsplot-0.9.0/ggstatsplot/man/theme_ggstatsplot.Rd | 16 ggstatsplot-0.9.0/ggstatsplot/tests/testthat.R | 1 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/additional_args.md |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/combine_plots.md | 3 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/ggbarstats.md | 6 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/ggbetweenstats.md | 12 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/ggcoefstats |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/ggcoefstats.md | 234 - ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/ggcorrmat.md | 12 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/ggdotplotstats.md | 3 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/ggpiestats.md | 12 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/ggscatterstats |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/ggscatterstats.md | 98 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/ggwithinstats.md | 43 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/grouped_ggbetweenstats |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/grouped_ggcorrmat |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/grouped_ggcorrmat.md |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/grouped_ggpiestats |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/grouped_ggscatterstats |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/grouped_ggwithinstats |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/pairwise_comparisons_between.md |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/pairwise_comparisons_within.md |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/pairwise_ggsignif.md | 322 +- ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/vdiffr_figs/ggbarstats-works.svg | 4 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/vdiffr_figs/ggbetweenstats-works.svg | 40 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/vdiffr_figs/ggcoefstats-works.svg | 186 - ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/vdiffr_figs/ggcorrmat-works-with-nas.svg |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/vdiffr_figs/ggpiestats-works.svg | 134 - ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/vdiffr_figs/ggscatterstats-works.svg | 481 ++- ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/vdiffr_figs/grouped-ggbarstats-works.svg | 10 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/vdiffr_figs/grouped-ggbetweenstats-works.svg | 65 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/vdiffr_figs/grouped-ggpiestats-works.svg | 288 +- ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/vdiffr_figs/grouped-ggscatterstats-works.svg | 1210 ++++------ ggstatsplot-0.9.0/ggstatsplot/tests/testthat/_snaps/z_ggcoefstats_dataframes.md | 186 - ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-additional_args.R |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-edge_case_null.R | 18 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-ggbarstats.R | 153 - ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-ggbetweenstats.R | 174 - ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-ggcoefstats.R | 142 - ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-ggcorrmat.R | 65 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-ggdotplotstats.R | 99 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-gghistostats.R | 140 - ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-ggpiestats.R | 303 +- ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-ggscatterstats.R | 274 +- ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-ggwithinstats.R | 327 +- ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-grouped_ggbarstats.R | 31 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-grouped_ggbetweenstats.R | 119 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-grouped_ggcorrmat.R | 96 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-grouped_ggdotplotstats.R | 23 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-grouped_gghistostats.R | 30 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-grouped_ggpiestats.R | 81 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-grouped_ggscatterstats.R | 170 - ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-grouped_ggwithinstats.R | 209 - ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-pairwise_caption_helpers.R |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-pairwise_comparisons_between.R |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-pairwise_comparisons_within.R |only ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-pairwise_ggsignif.R | 7 ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-vdiffr_figs.R | 247 +- ggstatsplot-0.9.0/ggstatsplot/tests/testthat/test-z_ggcoefstats_dataframes.R | 428 +-- ggstatsplot-0.9.0/ggstatsplot/vignettes/additional.Rmd | 77 ggstatsplot-0.9.0/ggstatsplot/vignettes/web_only/benchmarking.Rmd | 4 ggstatsplot-0.9.0/ggstatsplot/vignettes/web_only/dependencies.Rmd | 12 ggstatsplot-0.9.0/ggstatsplot/vignettes/web_only/faq.Rmd | 99 ggstatsplot-0.9.0/ggstatsplot/vignettes/web_only/ggbetweenstats.Rmd | 134 - ggstatsplot-0.9.0/ggstatsplot/vignettes/web_only/ggcoefstats.Rmd | 266 +- ggstatsplot-0.9.0/ggstatsplot/vignettes/web_only/ggcorrmat.Rmd | 63 ggstatsplot-0.9.0/ggstatsplot/vignettes/web_only/ggdotplotstats.Rmd | 22 ggstatsplot-0.9.0/ggstatsplot/vignettes/web_only/gghistostats.Rmd | 19 ggstatsplot-0.9.0/ggstatsplot/vignettes/web_only/ggpiestats.Rmd | 30 ggstatsplot-0.9.0/ggstatsplot/vignettes/web_only/ggscatterstats.Rmd | 60 ggstatsplot-0.9.0/ggstatsplot/vignettes/web_only/ggwithinstats.Rmd | 127 - ggstatsplot-0.9.0/ggstatsplot/vignettes/web_only/pairwise.Rmd |only ggstatsplot-0.9.0/ggstatsplot/vignettes/web_only/principles.Rmd | 48 ggstatsplot-0.9.0/ggstatsplot/vignettes/web_only/purrr_examples.Rmd | 340 +- 176 files changed, 6142 insertions(+), 6496 deletions(-)
Title: Crosstables for Descriptive Analyses
Description: Create descriptive tables for continuous and categorical variables.
Apply summary statistics and counting function, with or without a grouping variable, and create beautiful reports using 'rmarkdown' or 'officer'.
You can also compute statistical tests and effect sizes if needed.
Author: Dan Chaltiel [aut, cre] (<https://orcid.org/0000-0003-3488-779X>),
David Hajage [ccp]
Maintainer: Dan Chaltiel <dan.chaltiel@gmail.com>
Diff between crosstable versions 0.2.1 dated 2021-03-08 and 0.2.2 dated 2021-10-19
crosstable-0.2.1/crosstable/R/summarise_survival.R |only crosstable-0.2.1/crosstable/R/summarize_categorical.R |only crosstable-0.2.1/crosstable/R/summarize_numeric.R |only crosstable-0.2.1/crosstable/man/body_add_table_legend.Rd |only crosstable-0.2.1/crosstable/man/str_wrap2.Rd |only crosstable-0.2.2/crosstable/DESCRIPTION | 21 crosstable-0.2.2/crosstable/MD5 | 197 - crosstable-0.2.2/crosstable/NAMESPACE | 27 crosstable-0.2.2/crosstable/NEWS.md | 31 crosstable-0.2.2/crosstable/R/burgled.R |only crosstable-0.2.2/crosstable/R/compact.R | 8 crosstable-0.2.2/crosstable/R/cross_by.R | 77 crosstable-0.2.2/crosstable/R/cross_categorical.R | 153 crosstable-0.2.2/crosstable/R/cross_numeric.R | 158 crosstable-0.2.2/crosstable/R/cross_survival.R | 126 crosstable-0.2.2/crosstable/R/crosstable-package.R | 1 crosstable-0.2.2/crosstable/R/crosstable.R | 334 + crosstable-0.2.2/crosstable/R/effect.R | 511 +-- crosstable-0.2.2/crosstable/R/flextable.R | 106 crosstable-0.2.2/crosstable/R/funs.R | 31 crosstable-0.2.2/crosstable/R/gt.R | 32 crosstable-0.2.2/crosstable/R/labels.R | 36 crosstable-0.2.2/crosstable/R/officer.R | 298 + crosstable-0.2.2/crosstable/R/openxlsx.R | 134 crosstable-0.2.2/crosstable/R/test.R | 35 crosstable-0.2.2/crosstable/R/utils.R | 95 crosstable-0.2.2/crosstable/README.md | 88 crosstable-0.2.2/crosstable/build/vignette.rds |binary crosstable-0.2.2/crosstable/inst/WORDLIST |only crosstable-0.2.2/crosstable/inst/doc/crosstable-install.Rmd | 23 crosstable-0.2.2/crosstable/inst/doc/crosstable-install.html | 73 crosstable-0.2.2/crosstable/inst/doc/crosstable-report.R | 27 crosstable-0.2.2/crosstable/inst/doc/crosstable-report.Rmd | 81 crosstable-0.2.2/crosstable/inst/doc/crosstable-report.html | 120 crosstable-0.2.2/crosstable/inst/doc/crosstable-selection.R | 35 crosstable-0.2.2/crosstable/inst/doc/crosstable-selection.Rmd | 58 crosstable-0.2.2/crosstable/inst/doc/crosstable-selection.html | 409 -- crosstable-0.2.2/crosstable/inst/doc/crosstable.R | 86 crosstable-0.2.2/crosstable/inst/doc/crosstable.Rmd | 210 - crosstable-0.2.2/crosstable/inst/doc/crosstable.html | 619 +-- crosstable-0.2.2/crosstable/man/apply_labels.Rd | 59 crosstable-0.2.2/crosstable/man/as_flextable.Rd | 197 - crosstable-0.2.2/crosstable/man/as_gt.Rd | 141 crosstable-0.2.2/crosstable/man/as_workbook.Rd | 16 crosstable-0.2.2/crosstable/man/body_add_crosstable.Rd | 94 crosstable-0.2.2/crosstable/man/body_add_crosstable_footnote.Rd | 39 crosstable-0.2.2/crosstable/man/body_add_gg2.Rd | 109 crosstable-0.2.2/crosstable/man/body_add_img2.Rd | 95 crosstable-0.2.2/crosstable/man/body_add_legend.Rd |only crosstable-0.2.2/crosstable/man/body_add_list.Rd | 104 crosstable-0.2.2/crosstable/man/body_add_normal.Rd | 84 crosstable-0.2.2/crosstable/man/body_add_title.Rd | 8 crosstable-0.2.2/crosstable/man/compact.Rd | 109 crosstable-0.2.2/crosstable/man/confint_numeric.Rd | 3 crosstable-0.2.2/crosstable/man/cross_summary.Rd | 57 crosstable-0.2.2/crosstable/man/crosstable-package.Rd | 4 crosstable-0.2.2/crosstable/man/crosstable.Rd | 42 crosstable-0.2.2/crosstable/man/crosstable_effect_args.Rd | 50 crosstable-0.2.2/crosstable/man/crosstable_options.Rd | 1 crosstable-0.2.2/crosstable/man/crosstable_test_args.Rd | 84 crosstable-0.2.2/crosstable/man/display_effect.Rd | 41 crosstable-0.2.2/crosstable/man/display_test.Rd | 45 crosstable-0.2.2/crosstable/man/docx_bookmarks2.Rd | 8 crosstable-0.2.2/crosstable/man/effect_summary.Rd | 106 crosstable-0.2.2/crosstable/man/effect_survival.Rd | 45 crosstable-0.2.2/crosstable/man/effect_tabular.Rd | 87 crosstable-0.2.2/crosstable/man/format_fixed.Rd | 7 crosstable-0.2.2/crosstable/man/generate_autofit_macro.Rd |only crosstable-0.2.2/crosstable/man/get_label.Rd | 3 crosstable-0.2.2/crosstable/man/import_labels.Rd | 7 crosstable-0.2.2/crosstable/man/peek.Rd | 43 crosstable-0.2.2/crosstable/man/remove_labels.Rd | 53 crosstable-0.2.2/crosstable/man/rename_dataframe_with_labels.Rd | 49 crosstable-0.2.2/crosstable/man/set_label.Rd | 10 crosstable-0.2.2/crosstable/man/summaryFunctions.Rd | 200 - crosstable-0.2.2/crosstable/man/test_correlation_auto.Rd | 3 crosstable-0.2.2/crosstable/man/test_summarize_auto.Rd | 46 crosstable-0.2.2/crosstable/man/test_survival_logrank.Rd | 40 crosstable-0.2.2/crosstable/man/test_tabular_auto.Rd | 46 crosstable-0.2.2/crosstable/tests/testthat/_snaps/1-crosstable.md | 1703 ---------- crosstable-0.2.2/crosstable/tests/testthat/_snaps/1-effects.md |only crosstable-0.2.2/crosstable/tests/testthat/_snaps/1-tests.md |only crosstable-0.2.2/crosstable/tests/testthat/_snaps/4-officer.md | 286 + crosstable-0.2.2/crosstable/tests/testthat/docx/4-officer/snap_crosstables_double_with_effects.docx |binary crosstable-0.2.2/crosstable/tests/testthat/docx/4-officer/snap_crosstables_double_with_effects_new.docx |only crosstable-0.2.2/crosstable/tests/testthat/docx/4-officer/snap_crosstables_helpers.docx |binary crosstable-0.2.2/crosstable/tests/testthat/docx/4-officer/snap_crosstables_simple.docx |binary crosstable-0.2.2/crosstable/tests/testthat/docx/4-officer/snap_crosstables_simple_new.docx |only crosstable-0.2.2/crosstable/tests/testthat/docx/4-officer/snap_crosstables_triple.docx |binary crosstable-0.2.2/crosstable/tests/testthat/docx/4-officer/snap_crosstables_triple_new.docx |only crosstable-0.2.2/crosstable/tests/testthat/docx/4-officer/snap_utils_functions.docx |binary crosstable-0.2.2/crosstable/tests/testthat/docx/4-officer/snap_utils_functions_new.docx |only crosstable-0.2.2/crosstable/tests/testthat/helper-init_dataset.R | 46 crosstable-0.2.2/crosstable/tests/testthat/test-1-crosstable.R | 448 -- crosstable-0.2.2/crosstable/tests/testthat/test-1-effects.R |only crosstable-0.2.2/crosstable/tests/testthat/test-1-tests.R |only crosstable-0.2.2/crosstable/tests/testthat/test-2-selection.R | 8 crosstable-0.2.2/crosstable/tests/testthat/test-3-compact.R | 18 crosstable-0.2.2/crosstable/tests/testthat/test-4-officer.R | 122 crosstable-0.2.2/crosstable/tests/testthat/xlsx/test_openxlsx1.xlsx |binary crosstable-0.2.2/crosstable/tests/testthat/xlsx/test_openxlsx2.xlsx |binary crosstable-0.2.2/crosstable/tests/testthat/xlsx/test_openxlsx3.xlsx |binary crosstable-0.2.2/crosstable/tests/testthat/xlsx/test_openxlsx4.xlsx |binary crosstable-0.2.2/crosstable/tests/testthat/xlsx/test_openxlsx5.xlsx |only crosstable-0.2.2/crosstable/tests/testthat/xlsx/test_openxlsx6.xlsx |only crosstable-0.2.2/crosstable/vignettes/crosstable-install.Rmd | 23 crosstable-0.2.2/crosstable/vignettes/crosstable-report.Rmd | 81 crosstable-0.2.2/crosstable/vignettes/crosstable-selection.Rmd | 58 crosstable-0.2.2/crosstable/vignettes/crosstable.Rmd | 210 - 109 files changed, 4440 insertions(+), 4938 deletions(-)
Title: Multiple Pairwise Comparison Tests
Description: Multiple pairwise comparison tests on tidy data for
one-way analysis of variance for both between-subjects and
within-subjects designs. Currently, it supports only the most common
types of statistical analyses and tests: parametric (Welch's and
Student's t-test), nonparametric (Durbin-Conover and Dunn test),
robust (Yuen’s trimmed means test), and Bayes Factor (Student's
t-test).
Author: Indrajeet Patil [cre, aut, cph]
(<https://orcid.org/0000-0003-1995-6531>, @patilindrajeets)
Maintainer: Indrajeet Patil <patilindrajeet.science@gmail.com>
Diff between pairwiseComparisons versions 3.1.6 dated 2021-06-01 and 3.2.0 dated 2021-10-19
pairwiseComparisons-3.1.6/pairwiseComparisons/R/data.R |only pairwiseComparisons-3.1.6/pairwiseComparisons/R/helpers.R |only pairwiseComparisons-3.1.6/pairwiseComparisons/data |only pairwiseComparisons-3.1.6/pairwiseComparisons/man/bugs_long.Rd |only pairwiseComparisons-3.1.6/pairwiseComparisons/man/movies_long.Rd |only pairwiseComparisons-3.1.6/pairwiseComparisons/man/movies_wide.Rd |only pairwiseComparisons-3.2.0/pairwiseComparisons/DESCRIPTION | 19 pairwiseComparisons-3.2.0/pairwiseComparisons/LICENSE | 4 pairwiseComparisons-3.2.0/pairwiseComparisons/MD5 | 59 pairwiseComparisons-3.2.0/pairwiseComparisons/NAMESPACE | 87 pairwiseComparisons-3.2.0/pairwiseComparisons/NEWS.md | 292 +- pairwiseComparisons-3.2.0/pairwiseComparisons/R/attach.R |only pairwiseComparisons-3.2.0/pairwiseComparisons/R/global_vars.R | 37 pairwiseComparisons-3.2.0/pairwiseComparisons/R/pairwise_comparisons.R | 767 +++--- pairwiseComparisons-3.2.0/pairwiseComparisons/R/reexports.R | 54 pairwiseComparisons-3.2.0/pairwiseComparisons/README.md | 1120 ++++------ pairwiseComparisons-3.2.0/pairwiseComparisons/inst/CITATION | 10 pairwiseComparisons-3.2.0/pairwiseComparisons/inst/WORDLIST | 69 pairwiseComparisons-3.2.0/pairwiseComparisons/man/figures/README-ggsignif-1.png |binary pairwiseComparisons-3.2.0/pairwiseComparisons/man/figures/README-ggsignif2-1.png |binary pairwiseComparisons-3.2.0/pairwiseComparisons/man/p_adjust_text.Rd | 48 pairwiseComparisons-3.2.0/pairwiseComparisons/man/pairwise_caption.Rd | 75 pairwiseComparisons-3.2.0/pairwiseComparisons/man/pairwise_comparisons.Rd | 443 +-- pairwiseComparisons-3.2.0/pairwiseComparisons/man/reexports.Rd | 46 pairwiseComparisons-3.2.0/pairwiseComparisons/tests/spelling.R | 12 pairwiseComparisons-3.2.0/pairwiseComparisons/tests/testthat.R | 9 pairwiseComparisons-3.2.0/pairwiseComparisons/tests/testthat/_snaps/additional_args.md | 140 - pairwiseComparisons-3.2.0/pairwiseComparisons/tests/testthat/_snaps/pairwise_comparisons_between.md | 238 +- pairwiseComparisons-3.2.0/pairwiseComparisons/tests/testthat/_snaps/pairwise_comparisons_within.md | 294 +- pairwiseComparisons-3.2.0/pairwiseComparisons/tests/testthat/test-additional_args.R | 108 pairwiseComparisons-3.2.0/pairwiseComparisons/tests/testthat/test-pairwise_caption_helpers.R | 118 - pairwiseComparisons-3.2.0/pairwiseComparisons/tests/testthat/test-pairwise_comparisons_between.R | 612 ++--- pairwiseComparisons-3.2.0/pairwiseComparisons/tests/testthat/test-pairwise_comparisons_within.R | 408 +-- 33 files changed, 2517 insertions(+), 2552 deletions(-)
More information about pairwiseComparisons at CRAN
Permanent link
Title: Tidy Dataframes and Expressions with Statistical Details
Description: Utilities for producing dataframes with rich details for the
most common types of statistical approaches and tests: parametric,
nonparametric, robust, and Bayesian t-test, one-way ANOVA, correlation
analyses, contingency table analyses, and meta-analyses. The
functions are pipe-friendly and provide a consistent syntax to work
with tidy data. These dataframes additionally contain expressions with
statistical details, and can be used in graphing packages. This
package also forms the statistical processing backend for
'ggstatsplot'.
Author: Indrajeet Patil [cre, aut, cph]
(<https://orcid.org/0000-0003-1995-6531>, @patilindrajeets)
Maintainer: Indrajeet Patil <patilindrajeet.science@gmail.com>
Diff between statsExpressions versions 1.1.0 dated 2021-05-30 and 1.2.0 dated 2021-10-19
statsExpressions-1.1.0/statsExpressions/R/bf_extractor.R |only statsExpressions-1.1.0/statsExpressions/data/VR_dilemma.rdata |only statsExpressions-1.1.0/statsExpressions/man/VR_dilemma.Rd |only statsExpressions-1.1.0/statsExpressions/man/bf_extractor.Rd |only statsExpressions-1.1.0/statsExpressions/man/tidy_model_effectsize.Rd |only statsExpressions-1.1.0/statsExpressions/tests/testthat/test-bf_extractor.R |only statsExpressions-1.2.0/statsExpressions/DESCRIPTION | 22 statsExpressions-1.2.0/statsExpressions/LICENSE | 4 statsExpressions-1.2.0/statsExpressions/MD5 | 193 - statsExpressions-1.2.0/statsExpressions/NAMESPACE | 145 statsExpressions-1.2.0/statsExpressions/NEWS.md | 740 ++-- statsExpressions-1.2.0/statsExpressions/R/centrality_description.R |only statsExpressions-1.2.0/statsExpressions/R/contingency_table.R | 495 +- statsExpressions-1.2.0/statsExpressions/R/corr_test.R | 184 - statsExpressions-1.2.0/statsExpressions/R/data.R | 286 - statsExpressions-1.2.0/statsExpressions/R/global_vars.R | 70 statsExpressions-1.2.0/statsExpressions/R/helpers_easystats.R | 121 statsExpressions-1.2.0/statsExpressions/R/helpers_expr_templates.R | 675 +-- statsExpressions-1.2.0/statsExpressions/R/long_to_wide_converter.R |only statsExpressions-1.2.0/statsExpressions/R/meta_analysis.R | 234 - statsExpressions-1.2.0/statsExpressions/R/one_sample_test.R | 379 +- statsExpressions-1.2.0/statsExpressions/R/oneway_anova.R | 677 +-- statsExpressions-1.2.0/statsExpressions/R/reexports.R | 106 statsExpressions-1.2.0/statsExpressions/R/statsExpressions-package.R | 65 statsExpressions-1.2.0/statsExpressions/R/tidy_model_expressions.R |only statsExpressions-1.2.0/statsExpressions/R/two_sample_test.R | 511 +- statsExpressions-1.2.0/statsExpressions/R/utils.R |only statsExpressions-1.2.0/statsExpressions/README.md | 1380 ++++---- statsExpressions-1.2.0/statsExpressions/build/vignette.rds |binary statsExpressions-1.2.0/statsExpressions/inst/CITATION | 28 statsExpressions-1.2.0/statsExpressions/inst/WORDLIST | 151 statsExpressions-1.2.0/statsExpressions/inst/doc/stats_details.R | 16 statsExpressions-1.2.0/statsExpressions/inst/doc/stats_details.Rmd | 499 +- statsExpressions-1.2.0/statsExpressions/inst/doc/stats_details.html | 1704 +++++----- statsExpressions-1.2.0/statsExpressions/man/bugs_long.Rd | 86 statsExpressions-1.2.0/statsExpressions/man/centrality_description.Rd |only statsExpressions-1.2.0/statsExpressions/man/contingency_table.Rd | 274 - statsExpressions-1.2.0/statsExpressions/man/corr_test.Rd | 188 - statsExpressions-1.2.0/statsExpressions/man/expr_template.Rd | 245 - statsExpressions-1.2.0/statsExpressions/man/figures/README-anova_parametric2-1.png |binary statsExpressions-1.2.0/statsExpressions/man/figures/README-anova_rob1-1.png |binary statsExpressions-1.2.0/statsExpressions/man/figures/README-centrality-1.png |only statsExpressions-1.2.0/statsExpressions/man/figures/README-corr-1.png |binary statsExpressions-1.2.0/statsExpressions/man/figures/README-custom_expr-1.png |binary statsExpressions-1.2.0/statsExpressions/man/figures/README-gof-1.png |binary statsExpressions-1.2.0/statsExpressions/man/figures/README-metaanalysis-1.png |binary statsExpressions-1.2.0/statsExpressions/man/figures/README-t_one-1.png |binary statsExpressions-1.2.0/statsExpressions/man/figures/README-t_two-1.png |binary statsExpressions-1.2.0/statsExpressions/man/figures/README-t_two_paired1-1.png |binary statsExpressions-1.2.0/statsExpressions/man/format_num.Rd |only statsExpressions-1.2.0/statsExpressions/man/iris_long.Rd | 82 statsExpressions-1.2.0/statsExpressions/man/long_to_wide_converter.Rd |only statsExpressions-1.2.0/statsExpressions/man/meta_analysis.Rd | 213 - statsExpressions-1.2.0/statsExpressions/man/movies_long.Rd | 92 statsExpressions-1.2.0/statsExpressions/man/movies_wide.Rd | 96 statsExpressions-1.2.0/statsExpressions/man/one_sample_test.Rd | 284 - statsExpressions-1.2.0/statsExpressions/man/oneway_anova.Rd | 404 +- statsExpressions-1.2.0/statsExpressions/man/reexports.Rd | 70 statsExpressions-1.2.0/statsExpressions/man/statsExpressions-package.Rd | 86 statsExpressions-1.2.0/statsExpressions/man/stats_type_switch.Rd |only statsExpressions-1.2.0/statsExpressions/man/tidy_model_expressions.Rd |only statsExpressions-1.2.0/statsExpressions/man/tidy_model_parameters.Rd | 50 statsExpressions-1.2.0/statsExpressions/man/two_sample_test.Rd | 398 +- statsExpressions-1.2.0/statsExpressions/tests/spelling.R | 12 statsExpressions-1.2.0/statsExpressions/tests/testthat.R | 9 statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/centrality_description.md |only statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/contingency_table.md | 485 +- statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/corr_test.md | 232 - statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/format_num.md |only statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/long_to_wide_converter.md |only statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/meta_random_parametric.md | 46 statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/meta_random_robust.md | 49 statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/one_sample.md | 327 - statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/one_two_sample_dataframes.md | 238 - statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/oneway_anova_bayes.md | 80 statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/oneway_anova_nonparametric.md | 144 statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/oneway_anova_parametric.md | 200 - statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/oneway_anova_robust.md | 165 statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/tidy_model_expressions.md |only statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/tidy_model_expressions_F.md |only statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/two_sample_bayes.md | 42 statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/two_sample_nonparametric.md | 92 statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/two_sample_parametric.md | 205 - statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/two_sample_robust.md | 214 - statsExpressions-1.2.0/statsExpressions/tests/testthat/_snaps/z_meta_random_bayes.md | 20 statsExpressions-1.2.0/statsExpressions/tests/testthat/test-centrality_description.R |only statsExpressions-1.2.0/statsExpressions/tests/testthat/test-contingency_table.R | 653 +-- statsExpressions-1.2.0/statsExpressions/tests/testthat/test-corr_test.R | 304 - statsExpressions-1.2.0/statsExpressions/tests/testthat/test-format_num.R |only statsExpressions-1.2.0/statsExpressions/tests/testthat/test-grouped_dataframes.R | 90 statsExpressions-1.2.0/statsExpressions/tests/testthat/test-long_to_wide_converter.R |only statsExpressions-1.2.0/statsExpressions/tests/testthat/test-loop_execution.R | 105 statsExpressions-1.2.0/statsExpressions/tests/testthat/test-loop_execution_bayes.R | 190 - statsExpressions-1.2.0/statsExpressions/tests/testthat/test-meta_random_parametric.R | 62 statsExpressions-1.2.0/statsExpressions/tests/testthat/test-meta_random_robust.R | 60 statsExpressions-1.2.0/statsExpressions/tests/testthat/test-one_sample.R | 350 +- statsExpressions-1.2.0/statsExpressions/tests/testthat/test-one_two_sample_dataframes.R | 205 - statsExpressions-1.2.0/statsExpressions/tests/testthat/test-oneway_anova_bayes.R | 391 +- statsExpressions-1.2.0/statsExpressions/tests/testthat/test-oneway_anova_nonparametric.R | 292 - statsExpressions-1.2.0/statsExpressions/tests/testthat/test-oneway_anova_parametric.R | 439 +- statsExpressions-1.2.0/statsExpressions/tests/testthat/test-oneway_anova_robust.R | 141 statsExpressions-1.2.0/statsExpressions/tests/testthat/test-stats_type_switch.R |only statsExpressions-1.2.0/statsExpressions/tests/testthat/test-tidy_model_expressions.R |only statsExpressions-1.2.0/statsExpressions/tests/testthat/test-tidy_model_expressions_F.R |only statsExpressions-1.2.0/statsExpressions/tests/testthat/test-two_sample_bayes.R | 281 - statsExpressions-1.2.0/statsExpressions/tests/testthat/test-two_sample_nonparametric.R | 288 - statsExpressions-1.2.0/statsExpressions/tests/testthat/test-two_sample_parametric.R | 332 - statsExpressions-1.2.0/statsExpressions/tests/testthat/test-two_sample_robust.R | 316 - statsExpressions-1.2.0/statsExpressions/tests/testthat/test-z_meta_random_bayes.R | 124 statsExpressions-1.2.0/statsExpressions/vignettes/stats_details.Rmd | 499 +- statsExpressions-1.2.0/statsExpressions/vignettes/web_only/dataframe_outputs.Rmd | 1168 +++--- 111 files changed, 10012 insertions(+), 10091 deletions(-)
More information about statsExpressions at CRAN
Permanent link
Title: Portfolio Management with R
Description: Functions and examples for 'Portfolio
Management with R': backtesting investment and
trading strategies, computing profit/loss and
returns, analysing trades, handling lists of
transactions, reporting, and more.
Author: Enrico Schumann [aut, cre] (<https://orcid.org/0000-0001-7601-6576>)
Maintainer: Enrico Schumann <es@enricoschumann.net>
Diff between PMwR versions 0.16-1 dated 2021-09-18 and 0.17-0 dated 2021-10-19
PMwR-0.16-1/PMwR/tests/README |only PMwR-0.17-0/PMwR/ChangeLog | 50 +++++ PMwR-0.17-0/PMwR/DESCRIPTION | 8 PMwR-0.17-0/PMwR/MD5 | 64 +++---- PMwR-0.17-0/PMwR/NEWS | 20 ++ PMwR-0.17-0/PMwR/R/internal.R | 10 - PMwR-0.17-0/PMwR/R/is_valid_ISIN.R | 4 PMwR-0.17-0/PMwR/R/plot_trading_hours.R | 12 - PMwR-0.17-0/PMwR/R/rc.R |only PMwR-0.17-0/PMwR/R/rebalance.R | 34 +++ PMwR-0.17-0/PMwR/R/returns.R | 83 +++------ PMwR-0.17-0/PMwR/inst/CITATION | 4 PMwR-0.17-0/PMwR/inst/doc/An_overview_of_PMwR.R | 6 PMwR-0.17-0/PMwR/inst/doc/An_overview_of_PMwR.Rnw | 140 +++++++++++++--- PMwR-0.17-0/PMwR/inst/doc/An_overview_of_PMwR.pdf |binary PMwR-0.17-0/PMwR/inst/doc/Computing_returns.pdf |binary PMwR-0.17-0/PMwR/inst/doc/Drawdowns_streaks.pdf |binary PMwR-0.17-0/PMwR/inst/doc/FinTeX.pdf |binary PMwR-0.17-0/PMwR/inst/doc/pl_open_positions.pdf |binary PMwR-0.17-0/PMwR/inst/doc/q32.pdf |binary PMwR-0.17-0/PMwR/inst/tinytest/test_rc.R | 80 +++++++++ PMwR-0.17-0/PMwR/inst/tinytest/test_returns.R | 8 PMwR-0.17-0/PMwR/inst/tinytest/test_returns_dataframe.R | 7 PMwR-0.17-0/PMwR/inst/tinytest/test_returns_rebalance.R | 13 + PMwR-0.17-0/PMwR/man/PMwR-package.Rd | 2 PMwR-0.17-0/PMwR/man/instrument.Rd | 8 PMwR-0.17-0/PMwR/man/position.Rd | 18 +- PMwR-0.17-0/PMwR/man/quote32.Rd | 1 PMwR-0.17-0/PMwR/man/rc.Rd | 57 ++++-- PMwR-0.17-0/PMwR/man/returns.Rd | 11 - PMwR-0.17-0/PMwR/man/scale1.Rd | 6 PMwR-0.17-0/PMwR/man/trade-analysis.Rd | 2 PMwR-0.17-0/PMwR/man/valuation.Rd | 6 PMwR-0.17-0/PMwR/vignettes/An_overview_of_PMwR.Rnw | 140 +++++++++++++--- 34 files changed, 593 insertions(+), 201 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-05-25 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-03-14 1.1-0
2017-05-20 1.0-1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-07-25 2.4.2
2021-05-29 2.4.1
2021-05-04 2.4.0
2021-01-12 2.3.0
2020-11-04 2.2.3
2019-09-26 2.1.1
2019-01-29 2.0.0
2018-06-16 1.1
2018-02-23 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-03-02 0.7.0
2020-04-16 0.6.0
2020-03-05 0.5.2
2019-07-25 0.5.0
2018-04-03 0.4.7
2018-02-27 0.4.6
2017-01-19 0.3.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-07-12 1.3
2020-12-15 1.2
2020-08-29 1.1
2020-07-10 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-01-13 1.3
2020-05-31 1.2
2019-01-11 1.1
2018-11-27 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-05-18 0.3.0
2018-11-01 0.2.1
2018-03-19 0.1.1
2018-03-19 0.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-08-28 1.0.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-05-15 0.1.1
2020-05-08 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-02-07 0.1.1
2019-10-28 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-24 2.1.0
2017-08-16 1.2.0
2017-06-23 1.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-01-21 0.1.1
2018-04-05 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-10-14 2.0-18
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-11-13 1.0.0.6
2017-03-08 1.0.0.4
2017-03-02 1.0.0.3
2016-08-26 0.16.8.19
2015-11-03 0.15.11
2015-09-15 0.9.15
2015-06-12 0.6.15
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-12-03 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-09-01 0.16.8.25
2016-02-12 0.16.01.29
2015-11-24 0.15.11
2015-10-27 0.10.15
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-11-30 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-04-06 0.3.4
2020-12-13 0.3.3
2020-10-17 0.3.2
2020-06-03 0.3.1
2020-01-09 0.3.0
2019-07-09 0.2.3
2019-01-27 0.2.2
2019-01-21 0.2.1
2018-09-10 0.2.0
2018-04-09 0.1.2
Title: Radiation and Photovoltaic Systems
Description: Calculation methods of solar radiation and performance of photovoltaic systems from daily and intradaily irradiation data sources.
Author: Oscar Perpiñán Lamigueiro [cre, aut]
(<https://orcid.org/0000-0002-4134-7196>)
Maintainer: Oscar Perpiñán Lamigueiro <oscar.perpinan@upm.es>
Diff between solaR versions 0.45 dated 2020-01-19 and 0.46 dated 2021-10-19
DESCRIPTION | 8 ++-- MD5 | 73 +++++++++++++++++++++---------------------- R/fSolD.R | 2 - README.md | 36 +++++++++++---------- build |only inst/CITATION | 26 +++++++-------- man/G0-class.Rd | 4 +- man/Gef-class.Rd | 4 +- man/HQCurve.Rd | 4 +- man/NmgSFB.Rd | 4 +- man/ProdGCPV-class.Rd | 4 +- man/ProdPVPS-class.Rd | 4 +- man/Shade-class.Rd | 6 +-- man/Sol-class.Rd | 4 +- man/calcG0.Rd | 4 +- man/calcGef.Rd | 4 +- man/calcShd.Rd | 4 +- man/calcSol.Rd | 8 ++-- man/compareLosses-methods.Rd | 4 +- man/defunct.Rd | 2 - man/fBTd.Rd | 4 +- man/fCompD.Rd | 4 +- man/fCompI.Rd | 4 +- man/fInclin.Rd | 4 +- man/fProd.Rd | 4 +- man/fPump.Rd | 4 +- man/fSolD.Rd | 8 ++-- man/fSolI.Rd | 8 ++-- man/fSombra.Rd | 4 +- man/fTemp.Rd | 4 +- man/fTheta.Rd | 4 +- man/local2UTC.Rd | 4 +- man/optimShd.Rd | 4 +- man/prodExample.Rd | 2 - man/prodGCPV.Rd | 4 +- man/prodPVPS.Rd | 4 +- man/pumpCoef.Rd | 6 +-- man/solaR-package.Rd | 5 ++ 38 files changed, 146 insertions(+), 140 deletions(-)
Title: Convert Rd to 'Roxygen' Documentation
Description: Functions to convert Rd to 'roxygen' documentation. It can parse an
Rd file to a list, create the 'roxygen' documentation and update the original
R script (e.g. the one containing the definition of the function)
accordingly. This package also provides utilities that can help developers
build packages using 'roxygen' more easily. The 'formatR' package can be used
to reformat the R code in the examples sections so that the code will be
more readable.
Author: Hadley Wickham [aut],
Yihui Xie [aut, cre] (<https://orcid.org/0000-0003-0645-5666>)
Maintainer: Yihui Xie <xie@yihui.name>
Diff between Rd2roxygen versions 1.11 dated 2020-06-24 and 1.12 dated 2021-10-19
Rd2roxygen-1.11/Rd2roxygen/NEWS |only Rd2roxygen-1.12/Rd2roxygen/DESCRIPTION | 8 Rd2roxygen-1.12/Rd2roxygen/MD5 | 18 - Rd2roxygen-1.12/Rd2roxygen/NEWS.md |only Rd2roxygen-1.12/Rd2roxygen/R/build.R | 2 Rd2roxygen-1.12/Rd2roxygen/R/utils.R | 23 - Rd2roxygen-1.12/Rd2roxygen/README.md | 4 Rd2roxygen-1.12/Rd2roxygen/build/vignette.rds |binary Rd2roxygen-1.12/Rd2roxygen/inst/doc/Rd2roxygen.Rmd | 6 Rd2roxygen-1.12/Rd2roxygen/inst/doc/Rd2roxygen.html | 330 +++----------------- Rd2roxygen-1.12/Rd2roxygen/vignettes/Rd2roxygen.Rmd | 6 11 files changed, 87 insertions(+), 310 deletions(-)
Title: R Commander Plug-in for Case 1 (Object Case) Best-Worst Scaling
Description: Adds menu items to the R Commander for implementing case 1 (object case) best-worst scaling (BWS1) from designing choice sets to measuring preferences for items. BWS1 is a question-based survey method that constructs various combinations of items (choice sets) using the experimental designs, asks respondents to select the best and worst items in each choice set, and then measures preferences for the items by analyzing the responses. For details on BWS1, refer to Louviere et al. (2015) <doi:10.1017/CBO9781107337855>.
Author: Hideo Aizaki
Maintainer: Hideo Aizaki <azk-r@spa.nifty.com>
Diff between RcmdrPlugin.BWS1 versions 0.1-4 dated 2020-12-17 and 0.1-5 dated 2021-10-19
DESCRIPTION | 8 - MD5 | 10 - NEWS | 5 R/RcmdrPlugin.BWS1.R | 225 +++++++++++++--------------------------- inst/etc/menus.txt | 3 man/RcmdrPlugin.BWS1-package.Rd | 40 +++---- 6 files changed, 111 insertions(+), 180 deletions(-)
More information about RcmdrPlugin.BWS1 at CRAN
Permanent link
Title: A Lightweight, Modern and Flexible Logging Utility
Description: Inspired by the the 'futile.logger' R package and 'logging' Python module, this utility provides a flexible and extensible way of formatting and delivering log messages with low overhead.
Author: Gergely Daróczi [aut, cre] (<https://orcid.org/0000-0003-3149-8537>),
System1 [fnd]
Maintainer: Gergely Daróczi <daroczig@rapporter.net>
Diff between logger versions 0.2.1 dated 2021-07-06 and 0.2.2 dated 2021-10-19
DESCRIPTION | 8 +-- MD5 | 30 ++++++------ NEWS.md | 6 ++ README.md | 2 build/vignette.rds |binary inst/doc/Intro.html | 16 +++--- inst/doc/anatomy.html | 12 ++-- inst/doc/customize_logger.Rmd | 2 inst/doc/customize_logger.html | 76 +++++++++++++++---------------- inst/doc/migration.R | 2 inst/doc/migration.Rmd | 2 inst/doc/migration.html | 46 +++++++++--------- inst/doc/r_packages.html | 2 tests/testthat/test-CRANSKIP-appenders.R | 2 vignettes/customize_logger.Rmd | 2 vignettes/migration.Rmd | 2 16 files changed, 108 insertions(+), 102 deletions(-)
Title: Brings Seurat to the Tidyverse
Description: It creates an invisible layer that allow to see the 'Seurat' object
as tibble and interact seamlessly with the tidyverse.
Author: Stefano Mangiola [aut, cre],
Maria Doyle [ctb]
Maintainer: Stefano Mangiola <mangiolastefano@gmail.com>
Diff between tidyseurat versions 0.2.7 dated 2021-08-25 and 0.3.0 dated 2021-10-19
DESCRIPTION | 10 MD5 | 15 R/dplyr_methods.R | 2328 ++++++++++++++++++++++---------------------- R/zzz.R | 7 README.md | 1092 ++++++++++---------- build/tidyseurat.pdf |binary inst/CITATION |only inst/doc/introduction.html | 12 tests/testthat/test-dplyr.R | 298 ++--- 9 files changed, 1885 insertions(+), 1877 deletions(-)
Title: Linear Model with Breakpoint
Description: Exact significance tests for a changepoint in linear or multiple linear regression.
Confidence regions with exact coverage probabilities for the changepoint. Based on
Knowles, Siegmund and Zhang (1991) <doi:10.1093/biomet/78.1.15>.
Author: Marc Adams [aut, cre],
authors of R function 'lm' [ctb] (general interface),
authors of 'lm.gls' [ctb] (interface and R code for covariate weights),
U.S. NIST [ctb] (C++ code for TNT::Vector template)
Maintainer: Marc Adams <lm.br.pkg@gmail.com>
Diff between lm.br versions 2.9.3 dated 2017-04-27 and 2.9.4 dated 2021-10-19
DESCRIPTION | 16 +++--- MD5 | 24 +++++----- build/vignette.rds |binary demo/testscript.R | 2 inst/doc/lm.br.R | 122 ++++++++++++++++++++++++++--------------------------- inst/doc/lm.br.pdf |binary man/lm.br.Rd | 22 ++++----- src/gam_fs.cpp | 2 src/globals.h | 8 ++- src/pre_calc.cpp | 12 ++--- src/set_Sigma.cpp | 4 - src/set_sy.cpp | 4 - src/set_theta0.cpp | 4 - 13 files changed, 112 insertions(+), 108 deletions(-)