Title: Paws Low-Level Amazon Web Services API
Description: Functions for making low-level API requests to Amazon Web Services
<https://aws.amazon.com>. The functions handle building, signing, and
sending requests, and receiving responses. They are designed to help build
higher-level interfaces to individual services, such as Simple Storage
Service (S3).
Author: David Kretch [aut, cre],
Adam Banker [aut],
Amazon.com, Inc. [cph]
Maintainer: David Kretch <david.kretch@gmail.com>
Diff between paws.common versions 0.3.13 dated 2021-10-12 and 0.3.14 dated 2021-10-24
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS.md | 4 ++++ tests/testthat/test_net.R | 9 +++++++++ 4 files changed, 19 insertions(+), 6 deletions(-)
Title: Integrates 'Google Firebase' Authentication Method with 'Shiny'
Description: Authenticate users in 'Shiny' applications using 'Google Firebase'
with any of the many methods provided; email and password, email link, or
using a third-party provider such as 'Github', 'Twitter', or 'Google'.
Author: John Coene [aut, cre]
Maintainer: John Coene <jcoenep@gmail.com>
Diff between firebase versions 0.2.0 dated 2021-09-15 and 0.2.1 dated 2021-10-24
DESCRIPTION | 8 ++-- MD5 | 55 ++++++++++++++++--------------- NAMESPACE | 2 + NEWS.md | 8 ++++ R/class-core.R | 31 +++++++++++++++++ R/class-phone.R |only R/class-ui.R | 21 ++++++++++- R/config.R | 2 + R/dependencies.R | 58 +++++++++++++++++++++++++-------- README.md | 3 + inst/firebase/js/firebase-analytics.js | 2 - inst/firebase/js/firebase-app.js | 2 - inst/firebase/js/firebase-auth.js | 2 - inst/firebase/js/firebase-firestore.js | 2 - inst/fireblaze/core.js | 43 +++++++++++++----------- inst/fireblaze/email-link.js | 4 +- inst/fireblaze/email-password.js | 24 ++++++------- inst/fireblaze/oauth.js | 8 ++-- inst/fireblaze/phone.js |only inst/fireblaze/social.js | 32 +++++++++--------- inst/fireblaze/ui-utils.js | 6 +++ man/Firebase.Rd | 38 +++++++++++++++++++++ man/FirebaseEmailLink.Rd | 2 + man/FirebaseEmailPassword.Rd | 2 + man/FirebaseOauthProviders.Rd | 2 + man/FirebaseSocial.Rd | 2 + man/FirebaseUI.Rd | 5 ++ man/config.Rd | 2 + man/dependencies.Rd | 15 +++++++- man/recaptcha.Rd |only 30 files changed, 273 insertions(+), 108 deletions(-)
Title: Perform and Display Google Trends Queries
Description: An interface for retrieving and displaying the information
returned online by Google Trends is provided. Trends (number of
hits) over the time as well as geographic representation of the
results can be displayed.
Author: Philippe Massicotte [aut, cre],
Dirk Eddelbuettel [aut]
Maintainer: Philippe Massicotte <pmassicotte@hotmail.com>
Diff between gtrendsR versions 1.4.8 dated 2021-02-23 and 1.5.0 dated 2021-10-24
DESCRIPTION | 8 MD5 | 20 +- NEWS.md | 14 + R/gtrends.R | 121 ++++++------ R/related_queries.R | 45 ++-- R/related_topics.R | 40 ++-- R/setHandleParameters.R | 44 ++-- R/zzz.R | 439 ++++++++++++++++++++++++--------------------- README.md | 2 man/gtrends.Rd | 22 +- man/setHandleParameters.Rd | 46 ++-- 11 files changed, 439 insertions(+), 362 deletions(-)
Title: Linear Model Evaluation with Randomized Residuals in a
Permutation Procedure
Description: Linear model calculations are made for many random versions of data.
Using residual randomization in a permutation procedure, sums of squares are
calculated over many permutations to generate empirical probability distributions
for evaluating model effects. This packaged is described by
Collyer & Adams (2018) <doi:10.1111/2041-210X.13029>. Additionally, coefficients, statistics, fitted values, and residuals generated over many
permutations can be used for various procedures including pairwise tests, prediction, classification, and
model comparison. This package should provide most tools one could need for the analysis of
high-dimensional data, especially in ecology and evolutionary biology, but certainly other fields, as well.
Author: Michael Collyer [aut, cre] (<https://orcid.org/0000-0003-0238-2201>),
Dean Adams [aut] (<https://orcid.org/0000-0001-9172-7894>)
Maintainer: Michael Collyer <mlcollyer@gmail.com>
Diff between RRPP versions 1.1.0 dated 2021-10-09 and 1.1.1 dated 2021-10-24
DESCRIPTION | 6 +- MD5 | 14 +++--- NEWS.md | 8 +++ R/RRPP.support.code.r | 65 ++++++++++++------------------- R/lm.rrpp.r | 2 inst/doc/ANOVA.vs.MANOVA.html | 4 - inst/doc/Using.RRPP.html | 4 - tests/testthat/test-RRPP.R | 86 +++++++++++++++++++++++++++++++++++++++++- 8 files changed, 131 insertions(+), 58 deletions(-)
Title: Creating Groups from Data
Description: Methods for dividing data into groups.
Create balanced partitions and cross-validation folds.
Perform time series windowing and general grouping and splitting of data.
Balance existing groups with up- and downsampling or collapse them to fewer groups.
Author: Ludvig Renbo Olsen [aut, cre]
Maintainer: Ludvig Renbo Olsen <r-pkgs@ludvigolsen.dk>
Diff between groupdata2 versions 1.5.0 dated 2021-07-03 and 2.0.0 dated 2021-10-24
DESCRIPTION | 12 MD5 | 87 - NAMESPACE | 9 NEWS.md | 31 R/collapse_groups.R |only R/collapse_groups_auto_tuning.R |only R/collapse_groups_by.R |only R/create_num_col_groups.R | 112 + R/every_n_method.R |only R/find_missing_starts.R | 15 R/fold.R | 139 +- R/group.R | 9 R/group_factor.R | 44 R/group_size_methods.R | 2 R/helpers.R | 58 R/numerical_balancing.R | 597 ++++++++- R/ranked_balances.R |only R/scale_and_combine.R |only R/summarize_balances.R |only R/summarize_group_cols.R | 2 R/summarizers.R |only README.md | 553 ++++---- build/groupdata2.pdf |binary inst/doc/automatic_groups_with_groupdata2.html | 373 +---- inst/doc/cross-validation_with_groupdata2.html | 687 +++-------- inst/doc/description_of_groupdata2.Rmd | 45 inst/doc/description_of_groupdata2.html | 1013 ++++++---------- inst/doc/introduction_to_groupdata2.html | 211 --- inst/doc/time_series_with_groupdata2.html | 385 +----- man/all_groups_identical.Rd | 2 man/collapse_groups.Rd |only man/collapse_groups_by.Rd |only man/fold.Rd | 85 + man/group.Rd | 37 man/group_factor.Rd | 37 man/partition.Rd | 2 man/ranked_balances.Rd |only man/splt.Rd | 28 man/summarize_balances.Rd |only man/summarize_group_cols.Rd | 5 tests/testthat/test_balance.R | 9 tests/testthat/test_collapse_groups.R |only tests/testthat/test_collapse_groups_auto_tuning.R |only tests/testthat/test_collapse_groups_by.R |only tests/testthat/test_differs_from_previous.R | 22 tests/testthat/test_find_missing_starts.R | 3 tests/testthat/test_fold.R | 331 ++++- tests/testthat/test_group_factor.R | 97 + tests/testthat/test_numerically_balanced_grouping.R | 1244 +++++++++++++++++++- tests/testthat/test_summarize_balances.R |only tests/testthat/test_summarize_group_cols.R | 6 tests/testthat/test_summarizers.R |only vignettes/description_of_groupdata2.Rmd | 45 53 files changed, 3993 insertions(+), 2344 deletions(-)
Title: Linguistic Typology and Mapping
Description: Provides R with the Glottolog database <https://glottolog.org/> and some more abilities for purposes of linguistic mapping. The Glottolog database contains the catalogue of languages of the world. This package helps researchers to make a linguistic maps, using philosophy of the Cross-Linguistic Linked Data project <https://clld.org/>, which allows for while at the same time facilitating uniform access to the data across publications. A tutorial for this package is available on GitHub pages <https://docs.ropensci.org/lingtypology/> and package vignette. Maps created by this package can be used both for the investigation and linguistic teaching. In addition, package provides an ability to download data from typological databases such as WALS, AUTOTYP and some others and to create your own database website.
Author: George Moroz [aut, cre] (<https://orcid.org/0000-0003-1990-6083>),
Kirill Koncha [ctb] (<https://orcid.org/0000-0003-0676-2658>),
Mikhail Leonov [ctb],
Anna Smirnova [ctb]
Maintainer: George Moroz <agricolamz@gmail.com>
Diff between lingtypology versions 1.1.6 dated 2021-10-14 and 1.1.7 dated 2021-10-24
DESCRIPTION | 6 - MD5 | 24 ++++--- NAMESPACE | 1 R/lang.country.R |only R/soundcomparisons.feature.R | 50 +++++++++++++--- R/vanuatu.feature.R | 76 +++++++++++++++++++++---- inst/doc/lingtypology_creating_maps.html | 4 - inst/doc/lingtypology_db_API.html | 4 - inst/doc/lingtypology_dplyr.html | 4 - inst/doc/lingtypology_glottolog_functions.html | 4 - inst/doc/lingtypology_intro.html | 4 - man/lang.country.Rd |only man/soundcomparisons.feature.Rd | 3 tests/testthat/test-soundcomparisons-feature.R | 12 +-- 14 files changed, 141 insertions(+), 51 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-10-17 0.1.8
2021-10-07 0.1.7
2021-07-28 0.1.6
2021-03-22 0.1.5
2020-11-03 0.1.4
2020-02-09 0.1.3
2019-12-14 0.1.2
2019-05-22 0.1.1
2019-04-25 0.1.0
2019-03-21 0.0.10
2018-12-19 0.0.9
2018-10-22 0.0.8
2018-05-17 0.0.7
2018-02-22 0.0.6
2017-08-13 0.0.5
2017-06-21 0.0.4
2017-06-13 0.0.3
2017-06-12 0.0.2
2017-05-19 0.0.1
2017-05-18 0.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-01-07 0.4.5
2020-06-27 0.4.4
2019-12-01 0.4.2
2019-09-09 0.4.1
2019-07-11 0.4.0
2019-01-16 0.3.6
2018-08-02 0.3.3
2018-06-22 0.3.0
2018-05-30 0.2.7
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-10-17 0.1.3
2021-10-08 0.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-10-27 0.0.5
Title: Side Grammar Graphics
Description: The grammar of graphics as shown in 'ggplot2' has provided
an expressive API for users to build plots. 'ggside' extends 'ggplot2'
by allowing users to add graphical information about one of the main panel's
axis using a familiar 'ggplot2' style API with tidy data. This package is
particularly useful for visualizing metadata on a discrete axis, or summary
graphics on a continuous axis such as a boxplot or a density distribution.
Author: Justin Landis [aut, cre]
Maintainer: Justin Landis <jtlandis314@gmail.com>
Diff between ggside versions 0.1.2 dated 2021-07-21 and 0.1.3 dated 2021-10-24
ggside-0.1.2/ggside/man/figures/README-unnamed-chunk-2-1.png |only ggside-0.1.3/ggside/DESCRIPTION | 6 ggside-0.1.3/ggside/MD5 | 44 ggside-0.1.3/ggside/NAMESPACE | 4 ggside-0.1.3/ggside/NEWS.md | 5 ggside-0.1.3/ggside/R/Layer.r | 848 +++++----- ggside-0.1.3/ggside/R/plot-construction.R | 5 ggside-0.1.3/ggside/R/sideLayer.R | 114 - ggside-0.1.3/ggside/README.md | 10 ggside-0.1.3/ggside/inst/doc/ggside_aes_mapping.html | 8 ggside-0.1.3/ggside/inst/doc/ggside_basic_usage.html | 28 ggside-0.1.3/ggside/man/figures/README-example-1.png |binary ggside-0.1.3/ggside/man/figures/README-example-mix-scales-1.png |only ggside-0.1.3/ggside/tests/testthat/_snaps/ggside_scales/xsidey-ysidex-facetgrid.svg | 14 ggside-0.1.3/ggside/tests/testthat/_snaps/ggside_scales/xsidey-ysidex-facetnull.svg | 14 ggside-0.1.3/ggside/tests/testthat/_snaps/ggside_scales/xsidey-ysidex-facetwrap.svg | 14 ggside-0.1.3/ggside/tests/testthat/_snaps/vdiff_irisScatter/basic-side-histo.svg | 6 ggside-0.1.3/ggside/tests/testthat/_snaps/vdiff_irisScatter/collapsed-histo.svg | 33 ggside-0.1.3/ggside/tests/testthat/_snaps/vdiff_irisScatter/facetgrid-collapsed-density.svg | 42 ggside-0.1.3/ggside/tests/testthat/_snaps/vdiff_irisScatter/facetgrid-histo.svg | 33 ggside-0.1.3/ggside/tests/testthat/_snaps/vdiff_irisScatter/facetgrid-side-density.svg | 42 ggside-0.1.3/ggside/tests/testthat/_snaps/vdiff_irisScatter/stacked-side-density.svg | 42 ggside-0.1.3/ggside/tests/testthat/_snaps/vdiff_irisScatter/yside-histo.svg | 33 ggside-0.1.3/ggside/tests/testthat/test_vdiff_diamondplots.R | 3 24 files changed, 689 insertions(+), 659 deletions(-)
Title: Portable Native and Joint Stack Traces
Description: Obtain the native stack trace and fuse it with R's
stack trace for easier debugging of R packages with native code.
Author: Kirill Müller [aut, cre] (<https://orcid.org/0000-0002-1416-3412>),
R Consortium [fnd],
Ian Lance Taylor [aut] (Bundled libbacktrace library),
Free Software Foundation [cph] (Bundled libbacktrace library)
Maintainer: Kirill Müller <krlmlr+r@mailbox.org>
Diff between winch versions 0.0.6 dated 2020-11-16 and 0.0.7 dated 2021-10-24
DESCRIPTION | 9 MD5 | 23 +- NEWS.md | 8 R/add_trace_back.R | 80 +++++++ README.md | 2 build/vignette.rds |binary inst/doc/report.Rmd | 4 inst/doc/report.html | 370 ++++++----------------------------- src/trace_back_backtrace.c | 2 src/trace_back_unwind.c | 2 tests/testthat/_snaps |only tests/testthat/test-add_trace_back.R | 33 +++ vignettes/report.Rmd | 4 13 files changed, 212 insertions(+), 325 deletions(-)
Title: Processing various types of data on GEO and TCGA
Description: Gene Expression Omnibus(GEO) and The Cancer Genome Atlas (TCGA)
provide us with a wealth of data, such as RNA-seq, DNA Methylation, SNP
and Copy number variation data. It's easy to download data from TCGA using the
gdc tool, but processing these data into a format suitable for bioinformatics
analysis requires more work. This R package was developed to handle these data.
Author: Erqiang Hu [aut, cre]
Maintainer: Erqiang Hu <13766876214@163.com>
Diff between GeoTcgaData versions 1.0.1 dated 2021-08-01 and 1.0.2 dated 2021-10-24
DESCRIPTION | 6 +- MD5 | 18 +++--- R/CNV.R | 8 +-- R/SNP.R | 10 ++- R/TCGA_id_conversion.R | 7 +- R/id_conversion_all.r | 24 ++++----- R/sysdata.rda |binary README.md | 2 inst/doc/GeoTcgaData.html | 117 ++++++++++++++++++++------------------------ man/id_conversion_vector.Rd | 3 - 10 files changed, 98 insertions(+), 97 deletions(-)
Title: Minimal R/Shiny Interface to JavaScript Library 'ECharts'
Description: The goal is to deliver the full functionality of 'ECharts' with minimal overhead. 'ECharts' is based on data structures and 'echarty' users build R lists for these same data structures. One to three 'echarty' commands are usually sufficient to produce any chart.
Author: Larry Helgason [aut, cre, cph],
John Coene [aut, cph]
Maintainer: Larry Helgason <larry@helgasoft.com>
Diff between echarty versions 0.3.1 dated 2021-07-30 and 1.4.0 dated 2021-10-24
DESCRIPTION | 12 - MD5 | 43 ++- NAMESPACE | 1 NEWS.md | 25 ++ R/echarty.R | 524 ++++++++++++++++++++++++++------------------ R/examples.R | 92 ++++--- demo/eshiny.R | 151 ++++++------ inst/htmlwidgets/echarty.js | 228 +++++++++---------- inst/js/echarts.min.js | 4 man/ec.clmn.Rd | 19 + man/ec.data.Rd | 3 man/ec.examples.Rd | 96 ++++---- man/ec.fromJson.Rd | 2 man/ec.init.Rd | 31 +- man/ec.inspect.Rd | 2 man/ec.layout.Rd | 13 - man/ec.paxis.Rd |only man/ec.plugjs.Rd | 21 - man/ecr.band.Rd | 2 man/ecr.ebars.Rd | 2 man/ecs.exec.Rd | 2 tests |only 22 files changed, 742 insertions(+), 531 deletions(-)
Title: 'HJ-Biplot' using Different Ways of Penalization Plotting with
'ggplot2'
Description: 'HJ-Biplot' is a multivariate method that allow represent multivariate data on a subspace of low dimension, in such a way that most of the variability of the information is captured in a few dimensions. This package implements three new techniques and constructs in each case the 'HJ-Biplot', adapting restrictions to reduce weights and / or produce zero weights in the dimensions, based on the regularization theories. It implements three methods of regularization: Ridge, LASSO and Elastic Net.
Author: Mitzi Isabel Cubilla-Montilla <mitzi@usal.es>,
Carlos Alfredo Torres-Cubilla <carlos_t22@usal.es>,
Purificacion Galindo Villardon <pgalindo@usal.es> and
Ana Belen Nieto-Librero <ananieto@usal.es>
Maintainer: Mitzi Isabel Cubilla-Montilla <mitzi@usal.es>
Diff between SparseBiplots versions 4.0.0 dated 2020-06-27 and 4.0.1 dated 2021-10-24
DESCRIPTION | 9 ++++----- MD5 | 11 ++++++----- R/ElasticNet_HJBiplot.R | 2 +- R/LASSO_HJBiplot.R | 2 +- R/Plot_Biplot.R | 2 +- R/Ridge_HJBiplot.R | 2 +- inst |only 7 files changed, 14 insertions(+), 14 deletions(-)