Mon, 10 Jan 2022

Package dbscan updated to version 1.1-9 with previous version 1.1-8 dated 2021-04-27

Title: Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms
Description: A fast reimplementation of several density-based algorithms of the DBSCAN family for spatial data. Includes the clustering algorithms DBSCAN (density-based spatial clustering of applications with noise) and HDBSCAN (hierarchical DBSCAN), the ordering algorithm OPTICS (ordering points to identify the clustering structure), and the outlier detection algorithm LOF (local outlier factor). The implementations use the kd-tree data structure (from library ANN) for faster k-nearest neighbor search. An R interface to fast kNN and fixed-radius NN search is also provided. Hahsler, Piekenbrock and Doran (2019) <doi:10.18637/jss.v091.i01>.
Author: Michael Hahsler [aut, cre, cph], Matthew Piekenbrock [aut, cph], Sunil Arya [ctb, cph], David Mount [ctb, cph]
Maintainer: Michael Hahsler <mhahsler@lyle.smu.edu>

Diff between dbscan versions 1.1-8 dated 2021-04-27 and 1.1-9 dated 2022-01-10

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More information about dbscan at CRAN
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Package idiogramFISH updated to version 2.0.8 with previous version 2.0.6 dated 2021-09-30

Title: Shiny App. Idiograms with Marks and Karyotype Indices
Description: Plot idiograms of karyotypes, plasmids, circular chr. having a set of data.frames for chromosome data and optionally mark data. Two styles of chromosomes can be used: without or with visible chromatids. Supports micrometers, cM and Mb or any unit. Three styles of centromeres are available: triangle, rounded and inProtein; and six styles of marks are available: square (squareLeft), dots, cM (cMLeft), cenStyle, upArrow (downArrow), exProtein (inProtein); its legend (label) can be drawn inline or to the right of karyotypes. Idiograms can also be plotted in concentric circles. It is possible to calculate chromosome indices by Levan et al. (1964) <https:onlinelibrary.wiley.com/doi/abs/10.1111/j.1601-5223.1964.tb01953.x>, karyotype indices of Watanabe et al. (1999) <doi:10.1007/PL00013869> and Romero-Zarco (1986) <doi:10.2307/1221906> and classify chromosomes by morphology Guerra (1986) and Levan et al. (1964).
Author: Fernando Roa [aut, cre], Mariana PC Telles [ctb]
Maintainer: Fernando Roa <froao@unal.edu.co>

Diff between idiogramFISH versions 2.0.6 dated 2021-09-30 and 2.0.8 dated 2022-01-10

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More information about idiogramFISH at CRAN
Permanent link

Package deeptime updated to version 0.2.1 with previous version 0.2.0 dated 2021-09-02

Title: Plotting Tools for Anyone Working in Deep Time
Description: Extends the functionality of other plotting packages like 'ggplot2' and 'lattice' to help facilitate the plotting of data over long time intervals, including, but not limited to, geological, evolutionary, and ecological data. The primary goal of 'deeptime' is to enable users to add highly customizable timescales to their visualizations. Other functions are also included to assist with other areas of deep time visualization.
Author: William Gearty [aut, cre]
Maintainer: William Gearty <willgearty@gmail.com>

Diff between deeptime versions 0.2.0 dated 2021-09-02 and 0.2.1 dated 2022-01-10

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Package PAMpal updated to version 0.15.0 with previous version 0.14.4 dated 2021-10-09

Title: Load and Process Passive Acoustic Data
Description: Tools for loading and processing passive acoustic data. Read in data that has been processed in 'Pamguard' (<https://www.pamguard.org/>), apply a suite processing functions, and export data for reports or external modeling tools. Parameter calculations implement methods by Oswald et al (2007) <doi:10.1121/1.2743157>, Griffiths et al (2020) <doi:10.1121/10.0001229> and Baumann-Pickering et al (2010) <doi:10.1121/1.3479549>.
Author: Taiki Sakai [aut, cre], Jay Barlow [ctb], Emily Griffiths [ctb], Michael Oswald [ctb], Simone Baumann-Pickering [ctb], Julie Oswald [ctb]
Maintainer: Taiki Sakai <taiki.sakai@noaa.gov>

Diff between PAMpal versions 0.14.4 dated 2021-10-09 and 0.15.0 dated 2022-01-10

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 PAMpal-0.15.0/PAMpal/man/getBinaryData.Rd             |    2 
 PAMpal-0.15.0/PAMpal/man/getDetectorData.Rd           |    6 +
 PAMpal-0.15.0/PAMpal/man/testClick.Rd                 |    2 
 PAMpal-0.15.0/PAMpal/man/testGPL.Rd                   |only
 PAMpal-0.15.0/PAMpal/tests/testthat/test-processPps.R |    2 
 PAMpal-0.15.0/PAMpal/tests/testthat/test-workStudy.R  |    2 
 33 files changed, 401 insertions(+), 137 deletions(-)

More information about PAMpal at CRAN
Permanent link

Package PAMmisc updated to version 1.8.0 with previous version 1.7.0 dated 2021-10-08

Title: Miscellaneous Functions for Passive Acoustic Analysis
Description: A collection of miscellaneous functions for passive acoustics. Much of the content here is adapted to R from code written by other people. If you have any ideas of functions to add, please contact Taiki Sakai.
Author: Taiki Sakai [aut, cre], Jay Barlow [ctb], Julie Oswald [ctb], Val Schmidt [ctb]
Maintainer: Taiki Sakai <taiki.sakai@noaa.gov>

Diff between PAMmisc versions 1.7.0 dated 2021-10-08 and 1.8.0 dated 2022-01-10

 PAMmisc-1.7.0/PAMmisc/data/erddapList.RData |only
 PAMmisc-1.8.0/PAMmisc/DESCRIPTION           |   10 +-
 PAMmisc-1.8.0/PAMmisc/MD5                   |   42 ++++++------
 PAMmisc-1.8.0/PAMmisc/NAMESPACE             |    5 +
 PAMmisc-1.8.0/PAMmisc/NEWS.md               |   16 ++++
 PAMmisc-1.8.0/PAMmisc/R/addPgGps.R          |    5 +
 PAMmisc-1.8.0/PAMmisc/R/browseEdinfo.R      |   13 +++
 PAMmisc-1.8.0/PAMmisc/R/createSSP.R         |only
 PAMmisc-1.8.0/PAMmisc/R/data.R              |   11 +++
 PAMmisc-1.8.0/PAMmisc/R/downloadEnv.R       |   23 ++++--
 PAMmisc-1.8.0/PAMmisc/R/erddapToEdinfo.R    |   92 +++++++++++++++++++++++++--
 PAMmisc-1.8.0/PAMmisc/R/formatURL.R         |    2 
 PAMmisc-1.8.0/PAMmisc/R/getEdinfo.R         |   95 +++++++++++++++-------------
 PAMmisc-1.8.0/PAMmisc/R/matchEnvData.R      |   84 +++++++++++++++++++++---
 PAMmisc-1.8.0/PAMmisc/R/ncToData.R          |   41 ++++++++----
 PAMmisc-1.8.0/PAMmisc/R/ncUtils.R           |   62 ++++++++++++++++--
 PAMmisc-1.8.0/PAMmisc/README.md             |    6 +
 PAMmisc-1.8.0/PAMmisc/data/erddapList.rda   |only
 PAMmisc-1.8.0/PAMmisc/data/hycomList.rda    |only
 PAMmisc-1.8.0/PAMmisc/man/addPgGps.Rd       |    3 
 PAMmisc-1.8.0/PAMmisc/man/createSSP.Rd      |only
 PAMmisc-1.8.0/PAMmisc/man/downloadEnv.Rd    |   10 ++
 PAMmisc-1.8.0/PAMmisc/man/erddapToEdinfo.Rd |   14 +++-
 PAMmisc-1.8.0/PAMmisc/man/hycomList.Rd      |only
 PAMmisc-1.8.0/PAMmisc/man/ncToData.Rd       |    4 +
 25 files changed, 420 insertions(+), 118 deletions(-)

More information about PAMmisc at CRAN
Permanent link

Package gWidgets2 updated to version 1.0-9 with previous version 1.0-8 dated 2019-02-27

Title: Rewrite of gWidgets API for Simplified GUI Construction
Description: Re-implementation of the 'gWidgets' API. The API is defined in this package. A second, toolkit-specific package is required to use it. At this point only 'gWidgets2tcltk' is viable.
Author: John Verzani
Maintainer: John Verzani <jverzani@gmail.com>

Diff between gWidgets2 versions 1.0-8 dated 2019-02-27 and 1.0-9 dated 2022-01-10

 gWidgets2-1.0-8/gWidgets2/inst/doc                            |only
 gWidgets2-1.0-9/gWidgets2/DESCRIPTION                         |   13 
 gWidgets2-1.0-9/gWidgets2/MD5                                 |  172 ++++-----
 gWidgets2-1.0-9/gWidgets2/R/guiToolkit.R                      |   14 
 gWidgets2-1.0-9/gWidgets2/man/S4-classes.Rd                   |   41 --
 gWidgets2-1.0-9/gWidgets2/man/XXX.Rd                          |    1 
 gWidgets2-1.0-9/gWidgets2/man/add.Rd                          |    8 
 gWidgets2-1.0-9/gWidgets2/man/call_meth.Rd                    |    1 
 gWidgets2-1.0-9/gWidgets2/man/check_deprecated.Rd             |    1 
 gWidgets2-1.0-9/gWidgets2/man/check_return_class.Rd           |    1 
 gWidgets2-1.0-9/gWidgets2/man/dispose.Rd                      |    3 
 gWidgets2-1.0-9/gWidgets2/man/editable.Rd                     |    7 
 gWidgets2-1.0-9/gWidgets2/man/enabled.Rd                      |    7 
 gWidgets2-1.0-9/gWidgets2/man/flatten.Rd                      |    1 
 gWidgets2-1.0-9/gWidgets2/man/focus.Rd                        |    5 
 gWidgets2-1.0-9/gWidgets2/man/font.Rd                         |   11 
 gWidgets2-1.0-9/gWidgets2/man/gWidgets-handlers.Rd            |  181 ++--------
 gWidgets2-1.0-9/gWidgets2/man/gWidgets2-S3methods.Rd          |   46 --
 gWidgets2-1.0-9/gWidgets2/man/gWidgets2-package.Rd            |    7 
 gWidgets2-1.0-9/gWidgets2/man/gWidgets2-undocumented.Rd       |    1 
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 gWidgets2-1.0-9/gWidgets2/man/galert.Rd                       |   13 
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 gWidgets2-1.0-9/gWidgets2/man/gcheckboxgroup.Rd               |   37 +-
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 gWidgets2-1.0-9/gWidgets2/man/gcontainer.Rd                   |    1 
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 gWidgets2-1.0-9/gWidgets2/man/getWithDefault.Rd               |    1 
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 gWidgets2-1.0-9/gWidgets2/man/gexpandgroup.Rd                 |   36 +
 gWidgets2-1.0-9/gWidgets2/man/gfile.Rd                        |   77 ++--
 gWidgets2-1.0-9/gWidgets2/man/gfilter.Rd                      |   52 +-
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 gWidgets2-1.0-9/gWidgets2/man/gframe.Rd                       |   33 +
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 gWidgets2-1.0-9/gWidgets2/man/gimage.Rd                       |   32 +
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 gWidgets2-1.0-9/gWidgets2/man/gnotebook.Rd                    |   11 
 gWidgets2-1.0-9/gWidgets2/man/gpanedgroup.Rd                  |    8 
 gWidgets2-1.0-9/gWidgets2/man/gprogressbar.Rd                 |    3 
 gWidgets2-1.0-9/gWidgets2/man/gradio.Rd                       |   33 +
 gWidgets2-1.0-9/gWidgets2/man/gseparator.Rd                   |    8 
 gWidgets2-1.0-9/gWidgets2/man/gslider.Rd                      |   39 +-
 gWidgets2-1.0-9/gWidgets2/man/gspinbutton.Rd                  |   38 +-
 gWidgets2-1.0-9/gWidgets2/man/gstackwidget.Rd                 |    5 
 gWidgets2-1.0-9/gWidgets2/man/gstatusbar.Rd                   |    3 
 gWidgets2-1.0-9/gWidgets2/man/gtable.Rd                       |   41 +-
 gWidgets2-1.0-9/gWidgets2/man/gtext.Rd                        |   69 ++-
 gWidgets2-1.0-9/gWidgets2/man/gtimer.Rd                       |   15 
 gWidgets2-1.0-9/gWidgets2/man/gtoolbar.Rd                     |   28 -
 gWidgets2-1.0-9/gWidgets2/man/gtoolkit.Rd                     |    1 
 gWidgets2-1.0-9/gWidgets2/man/gtree.Rd                        |   47 +-
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 gWidgets2-1.0-9/gWidgets2/man/gwidget.Rd                      |   10 
 gWidgets2-1.0-9/gWidgets2/man/gwindow.Rd                      |   39 +-
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 gWidgets2-1.0-9/gWidgets2/man/installing_gWidgets_toolkits.Rd |    1 
 gWidgets2-1.0-9/gWidgets2/man/isExtant.Rd                     |    3 
 gWidgets2-1.0-9/gWidgets2/man/is_MacOSX.Rd                    |    1 
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 gWidgets2-1.0-9/gWidgets2/man/is_empty.Rd                     |    1 
 gWidgets2-1.0-9/gWidgets2/man/methods.Rd                      |    5 
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 gWidgets2-1.0-9/gWidgets2/man/redo.Rd                         |    3 
 gWidgets2-1.0-9/gWidgets2/man/short_summary.Rd                |   13 
 gWidgets2-1.0-9/gWidgets2/man/size.Rd                         |    7 
 gWidgets2-1.0-9/gWidgets2/man/svalue.Rd                       |    5 
 gWidgets2-1.0-9/gWidgets2/man/tag.Rd                          |    7 
 gWidgets2-1.0-9/gWidgets2/man/tooltip.Rd                      |    1 
 gWidgets2-1.0-9/gWidgets2/man/undo.Rd                         |    3 
 gWidgets2-1.0-9/gWidgets2/man/visible.Rd                      |    7 
 87 files changed, 982 insertions(+), 830 deletions(-)

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Package googleVis updated to version 0.6.11 with previous version 0.6.10 dated 2021-02-19

Title: R Interface to Google Charts
Description: R interface to Google's chart tools, allowing users to create interactive charts based on data frames. Charts are displayed locally via the R HTTP help server. A modern browser with an Internet connection is required. The data remains local and is not uploaded to Google.
Author: Markus Gesmann [aut, cre], Diego de Castillo [aut], Joe Cheng [ctb], Ashley Baldry [ctb], Durey Ingeniería [ctb]
Maintainer: Markus Gesmann <markus.gesmann@googlemail.com>

Diff between googleVis versions 0.6.10 dated 2021-02-19 and 0.6.11 dated 2022-01-10

 googleVis-0.6.10/googleVis/NEWS                             |only
 googleVis-0.6.10/googleVis/vignettes/mystyles.css           |only
 googleVis-0.6.11/googleVis/DESCRIPTION                      |   17 
 googleVis-0.6.11/googleVis/MD5                              |   47 
 googleVis-0.6.11/googleVis/NEWS.md                          |only
 googleVis-0.6.11/googleVis/R/gvis.R                         |    3 
 googleVis-0.6.11/googleVis/R/gvisAnnotatedTimeLine.R        |   52 
 googleVis-0.6.11/googleVis/R/gvisAnnotationChart.R          |   49 
 googleVis-0.6.11/googleVis/R/gvisMotionChart.R              |    6 
 googleVis-0.6.11/googleVis/R/zzz.R                          |    2 
 googleVis-0.6.11/googleVis/README.md                        |   11 
 googleVis-0.6.11/googleVis/build/googleVis.pdf              |binary
 googleVis-0.6.11/googleVis/build/vignette.rds               |binary
 googleVis-0.6.11/googleVis/data/Cats.RData                  |binary
 googleVis-0.6.11/googleVis/inst/doc/googleVis_examples.R    |    9 
 googleVis-0.6.11/googleVis/inst/doc/googleVis_examples.Rmd  |   24 
 googleVis-0.6.11/googleVis/inst/doc/googleVis_examples.html | 2328 ++++--------
 googleVis-0.6.11/googleVis/inst/doc/googleVis_intro.R       |    4 
 googleVis-0.6.11/googleVis/inst/doc/googleVis_intro.Rmd     |   44 
 googleVis-0.6.11/googleVis/inst/doc/googleVis_intro.html    | 1846 +++++----
 googleVis-0.6.11/googleVis/inst/googleVis_hexagon.R         |only
 googleVis-0.6.11/googleVis/man/figures                      |only
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 googleVis-0.6.11/googleVis/man/gvisAnnotationChart.Rd       |   49 
 googleVis-0.6.11/googleVis/man/gvisMotionChart.Rd           |    4 
 googleVis-0.6.11/googleVis/vignettes/googleVis_examples.Rmd |   24 
 googleVis-0.6.11/googleVis/vignettes/googleVis_intro.Rmd    |   44 
 27 files changed, 2047 insertions(+), 2565 deletions(-)

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Package crypto2 updated to version 1.4.0 with previous version 1.3.0 dated 2021-06-24

Title: Download Crypto Currency Data from 'CoinMarketCap' without 'API'
Description: Retrieves crypto currency information and historical prices as well as information on the exchanges they are listed on. Historical data contains daily open, high, low and close values for all crypto currencies. All data is scraped from <https://coinmarketcap.com> via their 'web-api'.
Author: Sebastian Stoeckl [aut, cre] (<https://orcid.org/0000-0002-4196-6093>, Package commissioner and maintainer.), Jesse Vent [ctb] (Creator of the crypto package that provided the idea and basis for this package.)
Maintainer: Sebastian Stoeckl <sebastian.stoeckl@uni.li>

Diff between crypto2 versions 1.3.0 dated 2021-06-24 and 1.4.0 dated 2022-01-10

 DESCRIPTION           |   12 +--
 MD5                   |   22 +++---
 NAMESPACE             |    1 
 NEWS.md               |    6 +
 R/crypto_history.R    |   93 +++++++++++++++++------------
 R/crypto_info.R       |  151 ++++++++++++++++++++++++++++++-----------------
 R/crypto_list.R       |   14 +++-
 R/globals.R           |    2 
 README.md             |  158 +++++++++++++++++++++++++++-----------------------
 man/crypto_history.Rd |   11 ++-
 man/crypto_info.Rd    |   11 +++
 man/exchange_info.Rd  |   11 +++
 12 files changed, 305 insertions(+), 187 deletions(-)

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New package TT with initial version 0.92
Package: TT
Title: Display Tree Structured Data using Datatable Widget (DT)
Version: 0.92
Description: Wrapper of datatable widget, allowing display of data.tree objects. All arguments of the data.tree become columns and each node is a row. Adds column with buttons allowing folding and unfolding the levels.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Depends: R (>= 2.10)
Imports: DT, dplyr (>= 1.0.0), magrittr, purrr, data.tree, htmlwidgets
NeedsCompilation: no
Packaged: 2022-01-08 10:15:25 UTC; mi
Author: Michal Zielaskowski [aut, cre]
Maintainer: Michal Zielaskowski <michal.zielaskowski@gmail.com>
Repository: CRAN
Date/Publication: 2022-01-10 18:12:51 UTC

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New package tornado with initial version 0.1.1
Package: tornado
Title: Plots for Model Sensitivity and Variable Importance
Version: 0.1.1
Description: Draws tornado plots for model sensitivity to univariate changes. Implements methods for many modeling methods including linear models, generalized linear models, survival regression models, and arbitrary machine learning models in the caret package. Also draws variable importance plots.
License: GPL-3
Encoding: UTF-8
Suggests: testthat, covr, caret, glmnet, randomForest, knitr, rmarkdown
Imports: survival, assertthat, ggplot2, scales, grid, gridExtra
VignetteBuilder: knitr
URL: https://github.com/bertcarnell/tornado
BugReports: https://github.com/bertcarnell/tornado/issues
NeedsCompilation: no
Packaged: 2022-01-09 04:20:28 UTC; bertc
Author: Rob Carnell [aut, cre]
Maintainer: Rob Carnell <bertcarnell@gmail.com>
Repository: CRAN
Date/Publication: 2022-01-10 18:50:02 UTC

More information about tornado at CRAN
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New package sehrnett with initial version 0.0.2
Package: sehrnett
Title: A Very Nice Interface to 'WordNet'
Version: 0.0.2
Description: A very nice interface to Princeton's 'WordNet' without 'rJava' dependency. 'WordNet' data is not included. Princeton University makes 'WordNet' available to research and commercial users free of charge provided the terms of their license (<https://wordnet.princeton.edu/license-and-commercial-use>) are followed, and proper reference is made to the project using an appropriate citation (<https://wordnet.princeton.edu/citing-wordnet>).
License: GPL (>= 3)
Encoding: UTF-8
Suggests: covr, testthat (>= 3.0.0)
Imports: DBI, RSQLite, magrittr, tibble, purrr, utils, dplyr
Config/testthat/parallel: true
NeedsCompilation: no
Packaged: 2022-01-09 13:44:08 UTC; chainsawriot
Author: Chung-hong Chan [aut, cre] (<https://orcid.org/0000-0002-6232-7530>)
Maintainer: Chung-hong Chan <chainsawtiney@gmail.com>
Repository: CRAN
Date/Publication: 2022-01-10 18:50:05 UTC

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Package rnn updated to version 1.5.0 with previous version 1.4.0 dated 2020-07-03

Title: Recurrent Neural Network
Description: Implementation of a Recurrent Neural Network architectures in native R, including Long Short-Term Memory (Hochreiter and Schmidhuber, <doi:10.1162/neco.1997.9.8.1735>), Gated Recurrent Unit (Chung et al., <arXiv:1412.3555>) and vanilla RNN.
Author: Bastiaan Quast [aut, cre] (<https://orcid.org/0000-0002-2951-3577>), Dimitri Fichou [aut]
Maintainer: Bastiaan Quast <bquast@gmail.com>

Diff between rnn versions 1.4.0 dated 2020-07-03 and 1.5.0 dated 2022-01-10

 rnn-1.4.0/rnn/tests/testthat/test_rnn.R |only
 rnn-1.5.0/rnn/DESCRIPTION               |   15 
 rnn-1.5.0/rnn/MD5                       |   26 -
 rnn-1.5.0/rnn/R/rnn.R                   |    2 
 rnn-1.5.0/rnn/README.md                 |   16 
 rnn-1.5.0/rnn/build/vignette.rds        |binary
 rnn-1.5.0/rnn/inst/CITATION             |    2 
 rnn-1.5.0/rnn/inst/doc/GRU_units.html   |  276 +++-----------
 rnn-1.5.0/rnn/inst/doc/LSTM_units.html  |  277 +++-----------
 rnn-1.5.0/rnn/inst/doc/basic_rnn.html   |  589 ++++++++++++++-----------------
 rnn-1.5.0/rnn/inst/doc/rnn.html         |  605 ++++++++++++--------------------
 rnn-1.5.0/rnn/inst/doc/rnn_units.html   |  227 ++----------
 rnn-1.5.0/rnn/inst/doc/sinus.html       |  393 ++++++++------------
 rnn-1.5.0/rnn/man/rnn.Rd                |    2 
 rnn-1.5.0/rnn/tests/testthat/test-rnn.R |only
 15 files changed, 893 insertions(+), 1537 deletions(-)

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New package RCPA3 with initial version 1.0.1
Package: RCPA3
Title: Data and Functions for R Companion to Political Analysis 3rd Ed
Version: 1.0.1
Description: Bundles the datasets and functions featured in Philip H. Pollock and Barry C. Edwards (Forthcoming 2022)<https://edge.sagepub.com/pollock>, "An R Companion to Political Analysis, 3rd Edition," Thousand Oaks, CA: Sage Publications.
License: CC0
LazyData: TRUE
Encoding: UTF-8
Depends: R (>= 4.0)
Imports: beepr, car, descr, graphics, grDevices, haven, Hmisc, knitr, lmtest, methods, stats, survey, utils, weights
Suggests: hexbin, rgl, scatterplot3d, gdata
NeedsCompilation: no
Packaged: 2022-01-08 05:19:12 UTC; User
Author: Barry Edwards [aut, cre], Philip Pollock [aut]
Maintainer: Barry Edwards <barry.edwards@ucf.edu>
Repository: CRAN
Date/Publication: 2022-01-10 18:02:47 UTC

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New package rbch with initial version 0.1-1
Package: rbch
Version: 0.1-1
Date: 2022-01-08
Title: Extraction and Analysis of Data from the Bitcoin Cash (BCH) Blockchain
Author: Rucknium [cre, aut, cph] (<https://orcid.org/0000-0001-5999-8950>), Bernhard Pfaff [aut, cph] (Creator of rbtc, the package that rbch is originally based on.)
Maintainer: Rucknium <Rucknium@protonmail.com>
Description: Issues RPC-JSON calls to 'bitcoind', the daemon of Bitcoin Cash (BCH), to extract transaction data from the blockchain. BCH is a fork of Bitcoin that permits a greater number of transactions per second. A BCH daemon is available under an MIT license from the Bitcoin Unlimited website <https://www.bitcoinunlimited.info>.
License: GPL-3
URL: https://github.com/Rucknium/rbch, https://www.bitcoinunlimited.info
BugReports: https://github.com/Rucknium/rbch/issues
SystemRequirements: BCHunlimited (>= 1.9.2)
Depends: R (>= 3.4.0)
Imports: gmp, httr, methods, openssl, rjson
NeedsCompilation: no
Packaged: 2022-01-08 21:02:43 UTC; test
Repository: CRAN
Date/Publication: 2022-01-10 18:42:47 UTC

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New package qacBase with initial version 1.0.2
Package: qacBase
Title: Functions to Facilitate Exploratory Data Analysis
Version: 1.0.2
Description: Functions for descriptive statistics, data management, and data visualization.
Depends: R (>= 3.5.0)
Encoding: UTF-8
LazyData: true
License: MIT + file LICENSE
VignetteBuilder: knitr
BugReports: https://github.com/rkabacoff/qacBase/issues
URL: https://github.com/rkabacoff/qacBase
Suggests: rmarkdown, knitr, kableExtra
Imports: ggplot2, dplyr, tidyr, ggcorrplot, multcompView, PMCMRplus, crayon, purrr, haven, rlang, ggExtra, patchwork
NeedsCompilation: no
Packaged: 2022-01-08 21:55:22 UTC; rkaba
Author: Kabacoff Robert [aut, cre], Barich Griffen [ctb], Jamrog Kelly [ctb], Kravchenko Elizaveta [ctb], Kuruvilla Jacob [ctb], Liu Lex [ctb], Nakamura Shota [ctb], Pham Kim [ctb], Rodriguez Belen [ctb], Ross Shane [ctb], Russo Chris [ctb], Corpuz Frederick [ctb], Juradat Nurah [ctb], Karp Harrison [ctb], Koech Kevin [ctb], Peters Anna [ctb], Shah Dhhyey [ctb], Stevenson Kenneth [ctb], Thomas-Franz Kaitlyn [ctb], Zheng Jiner [ctb], Aldarmaki Ahmed [ctb], Alneyadi Mohammed [ctb], Altai Chossis [ctb], Colorado Sofia [ctb], Northrop Blake [ctb], Peretz Shea [ctb], Qin Cher [ctb], Tuhabonye Emma [ctb], Wong Phillip [ctb]
Maintainer: Kabacoff Robert <rkabacoff@wesleyan.edu>
Repository: CRAN
Date/Publication: 2022-01-10 18:52:49 UTC

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New package ebmc with initial version 1.0.1
Package: ebmc
Title: Ensemble-Based Methods for Class Imbalance Problem
Version: 1.0.1
Author: Hsiang Hao, Chen
Maintainer: "Hsiang Hao, Chen" <kbman1101@gmail.com>
Description: Four ensemble-based methods (SMOTEBoost, RUSBoost, UnderBagging, and SMOTEBagging) for class imbalance problem are implemented for binary classification. Such methods adopt ensemble methods and data re-sampling techniques to improve model performance in presence of class imbalance problem. One special feature offers the possibility to choose multiple supervised learning algorithms to build weak learners within ensemble models. References: Nitesh V. Chawla, Aleksandar Lazarevic, Lawrence O. Hall, and Kevin W. Bowyer (2003) <doi:10.1007/978-3-540-39804-2_12>, Chris Seiffert, Taghi M. Khoshgoftaar, Jason Van Hulse, and Amri Napolitano (2010) <doi:10.1109/TSMCA.2009.2029559>, R. Barandela, J. S. Sanchez, R. M. Valdovinos (2003) <doi:10.1007/s10044-003-0192-z>, Shuo Wang and Xin Yao (2009) <doi:10.1109/CIDM.2009.4938667>, Yoav Freund and Robert E. Schapire (1997) <doi:10.1006/jcss.1997.1504>.
Depends: methods
Imports: e1071, rpart, C50, randomForest, pROC, smotefamily
License: GPL (>= 3)
Encoding: UTF-8
NeedsCompilation: no
Packaged: 2022-01-08 07:15:04 UTC; kbman
Repository: CRAN
Date/Publication: 2022-01-10 18:12:44 UTC

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New package autoReg with initial version 0.1.0
Package: autoReg
Title: Automatic Linear and Logistic Regression and Survival Analysis
Version: 0.1.0
URL: https://github.com/cardiomoon/autoReg, https://cardiomoon.github.io/autoReg/
BugReports: https://github.com/cardiomoon/autoReg/issues
Description: Make summary tables for descriptive statistics and select explanatory variables automatically in various regression models. Support linear models, generalized linear models and cox-proportional hazard models. Generate publication-ready tables summarizing result of regression analysis and plots. The tables and plots can be exported in "HTML", "pdf('LaTex')", "docx('MS Word')" and "pptx('MS Powerpoint')" documents.
License: GPL-3
Encoding: UTF-8
Imports: moonBook(>= 0.3.0), nortest, dplyr, stringr, tidyselect, tidyr, purrr, survival, mice, officer, flextable, rlang, patchwork, ggplot2, boot, broom, cmprsk
Suggests: knitr, finalfit, lme4, TH.data, rmarkdown, survminer, asaur
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2022-01-08 08:33:46 UTC; cardiomoon
Author: Keon-Woong Moon [aut, cre]
Maintainer: Keon-Woong Moon <cardiomoon@gmail.com>
Repository: CRAN
Date/Publication: 2022-01-10 18:12:47 UTC

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New package approxOT with initial version 1.0
Package: approxOT
Title: Approximate and Exact Optimal Transport Methods
Version: 1.0
Date: 2022-01-07
Author: Eric Dunipace
Maintainer: Eric Dunipace <edunipace@mail.harvard.edu>
Description: R and C++ functions to perform exact and approximate optimal transport. All C++ methods are linkable to other R packages via their header files.
License: GPL (>= 3.0)
Imports: Rcpp (>= 1.0.3), stats
LinkingTo: Rcpp, RcppEigen, RcppCGAL, BH
BugReports: https://github.com/ericdunipace/approxOT/issues
Suggests: testthat (>= 2.1.0), transport
NeedsCompilation: yes
Packaged: 2022-01-08 06:42:15 UTC; eifer
Repository: CRAN
Date/Publication: 2022-01-10 18:02:44 UTC

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Package VC2copula updated to version 0.1.2 with previous version 0.1.1 dated 2020-10-23

Title: Extend the 'copula' Package with Families and Models from 'VineCopula'
Description: Provides new classes for (rotated) BB1, BB6, BB7, BB8, and Tawn copulas, extends the existing Gumbel and Clayton families with rotations, and allows to set up a vine copula model using the 'copula' API. Corresponding objects from the 'VineCopula' API can easily be converted.
Author: Thomas Nagler [aut, cre], Benedikt Graeler [ctb]
Maintainer: Thomas Nagler <mail@tnagler.com>

Diff between VC2copula versions 0.1.1 dated 2020-10-23 and 0.1.2 dated 2022-01-10

 DESCRIPTION                            |    7 -
 MD5                                    |   33 ++++----
 NEWS.md                                |    7 +
 R/0_wrappers.R                         |  126 ++++++++++++++++++++++-----------
 R/BB1copula.R                          |    6 +
 R/BB6copula.R                          |    6 +
 R/BB7copula.R                          |    6 +
 R/BB8copula.R                          |    6 +
 R/joeBiCopula.R                        |    7 +
 R/surClaytonCopula.R                   |    5 +
 R/surGumbelCopula.R                    |    6 +
 R/tawnT1Copula.R                       |    7 +
 R/tawnT2Copula.R                       |   22 +++--
 R/vineCopulas.R                        |    1 
 README.md                              |    6 -
 man/VC2copula-package.Rd               |    5 -
 man/fitCopula.Rd                       |only
 tests/testthat/test-bivariate-models.R |   17 ++--
 18 files changed, 189 insertions(+), 84 deletions(-)

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New package surveyCV with initial version 0.1.1
Package: surveyCV
Title: Cross Validation Based on Survey Design
Version: 0.1.1
Description: Functions to generate test error estimates using cross validation, based on how a survey design is constructed (SRS, clustering, stratification, and/or unequal sampling weights). You can input linear and logistic regression models, along with data and a type of survey design in order to get an output that can help you determine which model best fits the data using K-fold cross validation. Our draft paper on "K-Fold Cross-Validation for Complex Sample Surveys" (under review; a copy is in the 'data-raw' folder of our GitHub repo) explains why differing how we take folds based on survey design is useful.
License: GPL-2 | GPL-3
Encoding: UTF-8
LazyData: TRUE
Depends: R (>= 4.0)
Imports: survey (>= 4.1), magrittr (>= 2.0)
Suggests: dplyr (>= 1.0), ggplot2 (>= 3.3), gridExtra (>= 2.3), ISLR (>= 1.2), knitr (>= 1.29), rmarkdown (>= 2.2), testthat (>= 3.1), grid (>= 4.0), splines (>= 4.0)
VignetteBuilder: knitr
URL: https://github.com/ColbyStatSvyRsch/surveyCV/
BugReports: https://github.com/ColbyStatSvyRsch/surveyCV/issues
NeedsCompilation: no
Packaged: 2022-01-07 19:51:51 UTC; jawieczo
Author: Cole Guerin [aut], Thomas McMahon [aut], Jerzy Wieczorek [cre, aut], Hunter Ratliff [ctb]
Maintainer: Jerzy Wieczorek <jawieczo@colby.edu>
Repository: CRAN
Date/Publication: 2022-01-10 17:50:02 UTC

More information about surveyCV at CRAN
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Package shinyWidgets updated to version 0.6.3 with previous version 0.6.2 dated 2021-09-17

Title: Custom Inputs Widgets for Shiny
Description: Collection of custom input controls and user interface components for 'Shiny' applications. Give your applications a unique and colorful style !
Author: Victor Perrier [aut, cre, cph], Fanny Meyer [aut], David Granjon [aut], Ian Fellows [ctb] (Methods for mutating vertical tabs & updateMultiInput), Wil Davis [ctb] (numericRangeInput function), Spencer Matthews [ctb] (autoNumeric methods), JavaScript and CSS libraries authors [ctb, cph] (All authors are listed in LICENSE.md)
Maintainer: Victor Perrier <victor.perrier@dreamrs.fr>

Diff between shinyWidgets versions 0.6.2 dated 2021-09-17 and 0.6.3 dated 2022-01-10

 shinyWidgets-0.6.2/shinyWidgets/inst/assets/bounty                                            |only
 shinyWidgets-0.6.2/shinyWidgets/inst/assets/numeric                                           |only
 shinyWidgets-0.6.2/shinyWidgets/inst/assets/vertical-tab-panel/vertical-tab-panel.js          |only
 shinyWidgets-0.6.3/shinyWidgets/DESCRIPTION                                                   |   12 
 shinyWidgets-0.6.3/shinyWidgets/MD5                                                           |  281 ++--
 shinyWidgets-0.6.3/shinyWidgets/NAMESPACE                                                     |    5 
 shinyWidgets-0.6.3/shinyWidgets/NEWS.md                                                       |  600 +++++-----
 shinyWidgets-0.6.3/shinyWidgets/R/actionBttn.R                                                |   48 
 shinyWidgets-0.6.3/shinyWidgets/R/bootstrap-utils.R                                           |   15 
 shinyWidgets-0.6.3/shinyWidgets/R/color-pickr.R                                               |    2 
 shinyWidgets-0.6.3/shinyWidgets/R/dependencies.R                                              |   70 -
 shinyWidgets-0.6.3/shinyWidgets/R/input-actiongroupbuttons.R                                  |    7 
 shinyWidgets-0.6.3/shinyWidgets/R/input-airDatepicker.R                                       |    2 
 shinyWidgets-0.6.3/shinyWidgets/R/input-autonumeric.R                                         |  203 +--
 shinyWidgets-0.6.3/shinyWidgets/R/input-awesomecheckbox.R                                     |    2 
 shinyWidgets-0.6.3/shinyWidgets/R/input-awesomeradio.R                                        |    4 
 shinyWidgets-0.6.3/shinyWidgets/R/input-checkboxgroupbuttons.R                                |  305 +----
 shinyWidgets-0.6.3/shinyWidgets/R/input-circlebutton.R                                        |    2 
 shinyWidgets-0.6.3/shinyWidgets/R/input-dropdown.R                                            |   46 
 shinyWidgets-0.6.3/shinyWidgets/R/input-icon.R                                                |  157 +-
 shinyWidgets-0.6.3/shinyWidgets/R/input-knob.R                                                |    8 
 shinyWidgets-0.6.3/shinyWidgets/R/input-materialswitch.R                                      |    2 
 shinyWidgets-0.6.3/shinyWidgets/R/input-multi.R                                               |    2 
 shinyWidgets-0.6.3/shinyWidgets/R/input-noUiSlider.R                                          |   12 
 shinyWidgets-0.6.3/shinyWidgets/R/input-numericRange.R                                        |   31 
 shinyWidgets-0.6.3/shinyWidgets/R/input-pretty.R                                              |   22 
 shinyWidgets-0.6.3/shinyWidgets/R/input-radiogroupbuttons.R                                   |  245 +---
 shinyWidgets-0.6.3/shinyWidgets/R/input-search.R                                              |    2 
 shinyWidgets-0.6.3/shinyWidgets/R/input-selectpicker.R                                        |    2 
 shinyWidgets-0.6.3/shinyWidgets/R/input-sliderText.R                                          |    2 
 shinyWidgets-0.6.3/shinyWidgets/R/input-spectrum.R                                            |    6 
 shinyWidgets-0.6.3/shinyWidgets/R/input-switch.R                                              |    5 
 shinyWidgets-0.6.3/shinyWidgets/R/input-textaddon.R                                           |    9 
 shinyWidgets-0.6.3/shinyWidgets/R/module-selectizeGroup.R                                     |   49 
 shinyWidgets-0.6.3/shinyWidgets/R/pickerOptions.R                                             |   12 
 shinyWidgets-0.6.3/shinyWidgets/R/progressBars.R                                              |   11 
 shinyWidgets-0.6.3/shinyWidgets/R/stati-card.R                                                |    7 
 shinyWidgets-0.6.3/shinyWidgets/R/sw-dropdown.R                                               |    4 
 shinyWidgets-0.6.3/shinyWidgets/R/sweetalert.R                                                |  120 +-
 shinyWidgets-0.6.3/shinyWidgets/R/useBs4Dash.R                                                |  121 --
 shinyWidgets-0.6.3/shinyWidgets/R/vertical-tab.R                                              |  139 --
 shinyWidgets-0.6.3/shinyWidgets/README.md                                                     |  476 +++----
 shinyWidgets-0.6.3/shinyWidgets/inst/assets/bootstrap-select/picker-bindings.js               |  190 +--
 shinyWidgets-0.6.3/shinyWidgets/inst/assets/bootstrap-switch/bootstrap-switch-3.4             |only
 shinyWidgets-0.6.3/shinyWidgets/inst/assets/buttons-group/checkboxGroupButtons-bindings.js    |   18 
 shinyWidgets-0.6.3/shinyWidgets/inst/assets/buttons-group/checkboxGroupButtons.css            |   48 
 shinyWidgets-0.6.3/shinyWidgets/inst/assets/buttons-group/radioGroupButtons-bindings.js       |   18 
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 shinyWidgets-0.6.3/shinyWidgets/inst/assets/numericRange/js/numericRange-bindings.js          |    9 
 shinyWidgets-0.6.3/shinyWidgets/inst/assets/shinyWidgets-bindings.min.js                      |    2 
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 shinyWidgets-0.6.3/shinyWidgets/inst/assets/sweetalert2/sweetalert-bindings.js                |  232 +--
 shinyWidgets-0.6.3/shinyWidgets/inst/assets/tools.R                                           |    2 
 shinyWidgets-0.6.3/shinyWidgets/inst/assets/vertical-tab-panel/vertical-tab-panel-bindings.js |  124 +-
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 shinyWidgets-0.6.3/shinyWidgets/inst/examples/checkboxGroupButtons/server.R                   |    2 
 shinyWidgets-0.6.3/shinyWidgets/inst/examples/checkboxGroupButtons/ui.R                       |  198 ++-
 shinyWidgets-0.6.3/shinyWidgets/inst/examples/dropdown/ex-sw-dropdown.R                       |    2 
 shinyWidgets-0.6.3/shinyWidgets/inst/examples/radioGroupButtons/server.R                      |    2 
 shinyWidgets-0.6.3/shinyWidgets/inst/examples/radioGroupButtons/ui.R                          |  119 +
 shinyWidgets-0.6.3/shinyWidgets/inst/examples/shinyWidgets/code_dropdown.R                    |    2 
 shinyWidgets-0.6.3/shinyWidgets/inst/examples/shinyWidgets/code_dropdownButton.R              |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/actionBttn.Rd                                             |    4 
 shinyWidgets-0.6.3/shinyWidgets/man/actionGroupButtons.Rd                                     |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/addSpinner.Rd                                             |    4 
 shinyWidgets-0.6.3/shinyWidgets/man/airDatepicker.Rd                                          |    4 
 shinyWidgets-0.6.3/shinyWidgets/man/animateOptions.Rd                                         |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/autonumericInput.Rd                                       |  244 ++--
 shinyWidgets-0.6.3/shinyWidgets/man/awesomeRadio.Rd                                           |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/checkboxGroupButtons.Rd                                   |  120 +-
 shinyWidgets-0.6.3/shinyWidgets/man/circleButton.Rd                                           |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/colorPickr.Rd                                             |    9 
 shinyWidgets-0.6.3/shinyWidgets/man/downloadBttn.Rd                                           |   16 
 shinyWidgets-0.6.3/shinyWidgets/man/dropMenu.Rd                                               |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/dropMenuOptions.Rd                                        |    4 
 shinyWidgets-0.6.3/shinyWidgets/man/dropdown.Rd                                               |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/execute_safely.Rd                                         |    4 
 shinyWidgets-0.6.3/shinyWidgets/man/formaNumericInputUpdate.Rd                                |    4 
 shinyWidgets-0.6.3/shinyWidgets/man/formatNumericInput.Rd                                     |   36 
 shinyWidgets-0.6.3/shinyWidgets/man/html-dependencies.Rd                                      |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/inputSweetAlert.Rd                                        |    8 
 shinyWidgets-0.6.3/shinyWidgets/man/knobInput.Rd                                              |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/materialSwitch.Rd                                         |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/multiInput.Rd                                             |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/noUiSliderInput.Rd                                        |    8 
 shinyWidgets-0.6.3/shinyWidgets/man/numericInputIcon.Rd                                       |  120 +-
 shinyWidgets-0.6.3/shinyWidgets/man/numericRangeInput.Rd                                      |    7 
 shinyWidgets-0.6.3/shinyWidgets/man/pickerGroup-module.Rd                                     |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/pickerInput.Rd                                            |   10 
 shinyWidgets-0.6.3/shinyWidgets/man/pickerOptions.Rd                                          |   14 
 shinyWidgets-0.6.3/shinyWidgets/man/prettyCheckbox.Rd                                         |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/prettyCheckboxGroup.Rd                                    |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/prettyRadioButtons.Rd                                     |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/prettySwitch.Rd                                           |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/prettyToggle.Rd                                           |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/progress-bar.Rd                                           |    4 
 shinyWidgets-0.6.3/shinyWidgets/man/progressSweetAlert.Rd                                     |   12 
 shinyWidgets-0.6.3/shinyWidgets/man/radioGroupButtons.Rd                                      |  117 +
 shinyWidgets-0.6.3/shinyWidgets/man/searchInput.Rd                                            |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/selectizeGroup-module.Rd                                  |   14 
 shinyWidgets-0.6.3/shinyWidgets/man/show_toast.Rd                                             |    3 
 shinyWidgets-0.6.3/shinyWidgets/man/sliderTextInput.Rd                                        |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/spectrumInput.Rd                                          |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/stati-card.Rd                                             |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/sweetalert-confirmation.Rd                                |    5 
 shinyWidgets-0.6.3/shinyWidgets/man/sweetalert.Rd                                             |    7 
 shinyWidgets-0.6.3/shinyWidgets/man/switchInput.Rd                                            |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/textInputAddon.Rd                                         |    4 
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 shinyWidgets-0.6.3/shinyWidgets/man/toggleDropdownButton.Rd                                   |    2 
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 shinyWidgets-0.6.3/shinyWidgets/man/updateAutonumericInput.Rd                                 |    2 
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 shinyWidgets-0.6.3/shinyWidgets/man/updateKnobInput.Rd                                        |    8 
 shinyWidgets-0.6.3/shinyWidgets/man/updateNoUiSliderInput.Rd                                  |    2 
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 shinyWidgets-0.6.3/shinyWidgets/man/updateNumericRangeInput.Rd                                |   54 
 shinyWidgets-0.6.3/shinyWidgets/man/updatePrettyCheckbox.Rd                                   |    7 
 shinyWidgets-0.6.3/shinyWidgets/man/updatePrettyCheckboxGroup.Rd                              |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/updatePrettyRadioButtons.Rd                               |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/updatePrettySwitch.Rd                                     |    7 
 shinyWidgets-0.6.3/shinyWidgets/man/updatePrettyToggle.Rd                                     |    7 
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 shinyWidgets-0.6.3/shinyWidgets/man/updateSpectrumInput.Rd                                    |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/updateSwitchInput.Rd                                      |    2 
 shinyWidgets-0.6.3/shinyWidgets/man/updateTextInputIcon.Rd                                    |   11 
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 shinyWidgets-0.6.3/shinyWidgets/man/useSweetAlert.Rd                                          |    8 
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 shinyWidgets-0.6.3/shinyWidgets/tests/testthat/test-checkboxGroupButtons.R                    |   29 
 shinyWidgets-0.6.3/shinyWidgets/tests/testthat/test-dropdown.R                                |    4 
 shinyWidgets-0.6.3/shinyWidgets/tests/testthat/test-dropdownButton.R                          |    4 
 shinyWidgets-0.6.3/shinyWidgets/tests/testthat/test-numericRange.R                            |    6 
 shinyWidgets-0.6.3/shinyWidgets/tests/testthat/test-panel.R                                   |    7 
 shinyWidgets-0.6.3/shinyWidgets/tests/testthat/test-radioGroupButtons.R                       |   29 
 shinyWidgets-0.6.3/shinyWidgets/tests/testthat/test-updateCheckboxGroupButtons.R              |    2 
 shinyWidgets-0.6.3/shinyWidgets/tests/testthat/test-updateRadioGroupButtons.R                 |    2 
 143 files changed, 2979 insertions(+), 2685 deletions(-)

More information about shinyWidgets at CRAN
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Package modelsummary updated to version 0.9.5 with previous version 0.9.4 dated 2021-11-05

Title: Summary Tables and Plots for Statistical Models and Data: Beautiful, Customizable, and Publication-Ready
Description: Create beautiful and customizable tables to summarize several statistical models side-by-side. Draw coefficient plots, multi-level cross-tabs, dataset summaries, balance tables (a.k.a. "Table 1s"), and correlation matrices. This package supports dozens of statistical models, and it can produce tables in HTML, LaTeX, Word, Markdown, PDF, PowerPoint, Excel, RTF, JPG, or PNG. Tables can easily be embedded in 'Rmarkdown' or 'knitr' dynamic documents.
Author: Vincent Arel-Bundock [aut, cre] (<https://orcid.org/0000-0003-2042-7063>), Joachim Gassen [ctb] (<https://orcid.org/0000-0003-4364-2911>), Nathan Eastwood [ctb], Nick Huntington-Klein [ctb] (<https://orcid.org/0000-0002-7352-3991>), Moritz Schwarz [ctb] (<https://orcid.org/0000-0003-0340-3780>), Benjamin Elbers [ctb] (0000-0001-5392-3448), Grant McDermott [ctb] (<https://orcid.org/0000-0001-7883-8573>)
Maintainer: Vincent Arel-Bundock <vincent.arel-bundock@umontreal.ca>

Diff between modelsummary versions 0.9.4 dated 2021-11-05 and 0.9.5 dated 2022-01-10

 DESCRIPTION                       |   11 ++--
 MD5                               |   44 +++++++++--------
 NEWS.md                           |   22 ++++++++
 R/datasummary.R                   |    8 +++
 R/datasummary_skim.R              |   19 ++++++-
 R/factory_kableExtra.R            |    2 
 R/get_estimates.R                 |   10 +++-
 R/get_gof.R                       |   10 +++-
 R/modelsummary.R                  |    5 +-
 R/sanitize_gof_map.R              |    7 ++
 R/sanitize_output.R               |    8 +++
 R/sanitize_vcov.R                 |   94 ++++++++++++++------------------------
 README.md                         |    2 
 build/modelsummary.pdf            |binary
 man/get_estimates.Rd              |   10 ++--
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 tests/testthat/helper-requiet.R   |    1 
 tests/testthat/test-datasummary.R |    9 +++
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 tests/testthat/test-missing.R     |    2 
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 24 files changed, 203 insertions(+), 109 deletions(-)

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New package GEInfo with initial version 1.0
Package: GEInfo
Title: Gene-Environment Interaction Analysis Incorporating Prior Information
Version: 1.0
Author: Xiaoyan Wang, Hongduo Liu, and Shuangge Ma
Maintainer: Xiaoyan Wang <xywang@hnu.edu.cn>
Description: Realize three approaches for Gene-Environment interaction analysis. All of them adopt Sparse Group Minimax Concave Penalty to identify important G variables and G-E interactions, and simultaneously respect the hierarchy between main G and G-E interaction effects. All the three approaches are available for Linear, Logistic, and Poisson regression. Also realize to mine and construct prior information for G variables and G-E interactions.
License: GPL
Encoding: UTF-8
Imports: MASS, glmnet, stats, rvest, dplyr, pheatmap, grDevices, graphics
NeedsCompilation: no
Packaged: 2022-01-08 04:17:01 UTC; xiaoyanwang
Repository: CRAN
Date/Publication: 2022-01-10 17:52:50 UTC

More information about GEInfo at CRAN
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Package EMSS updated to version 1.1.1 with previous version 1.1.0 dated 2021-05-10

Title: Some EM-Type Estimation Methods for the Heckman Selection Model
Description: Some EM-type algorithms to estimate parameters for the well-known Heckman selection model are provided in the package. Such algorithms are as follow: ECM(Expectation/Conditional Maximization), ECM(NR)(the Newton-Raphson method is adapted to the ECM) and ECME(Expectation/Conditional Maximization Either). Since the algorithms are based on the EM algorithm, they also have EM’s main advantages, namely, stability and ease of implementation. Further details and explanations of the algorithms can be found in Zhao et al. (2020) <doi: 10.1016/j.csda.2020.106930>.
Author: Kexuan Yang <717260446@qq.com>, Sang Kyu Lee <leesa111@msu.edu>, Jun Zhao <zhaojun2021@hotmail.com>, and Hyoung-Moon Kim <hmk966a@gmail.com >
Maintainer: Sang Kyu Lee <leesa111@msu.edu>

Diff between EMSS versions 1.1.0 dated 2021-05-10 and 1.1.1 dated 2022-01-10

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New package dplbnDE with initial version 0.1.1
Package: dplbnDE
Title: Discriminative Parameter Learning of Bayesian Networks by Differential Evolution
Version: 0.1.1
Maintainer: Alejandro Platas-Lopez <alejandroplatasl@gmail.com>
BugReports: https://github.com/alexplatasl/dplbnDE/issues
Description: Implements Differential Evolution (DE) to train parameters of Bayesian Networks for optimizing the Conditional Log-Likelihood (Discriminative Learning) instead of the log-likelihood (Generative Learning). Any given Bayesian Network structure encodes assumptions about conditional independencies among the attributes and will result in an error if they do not hold in the data. Such an error includes the classification dimension. The main goal of Discriminative learning is to minimize this type of error. This package provides main variants of differential evolution described in Price & Storn (1996) <doi:10.1109/ICEC.1996.542711> and recent ones, described in Tanabe & Fukunaga (2014) <doi:10.1109/CEC.2014.6900380> and Zhang & Sanderson (2009) <doi:10.1109/TEVC.2009.2014613> with adaptation mechanism for factor mutarion and crossover rate.
License: GPL (>= 2)
Encoding: UTF-8
Depends: R (>= 3.2.0)
Imports: bnclassify (>= 0.4.5),
LazyData: true
NeedsCompilation: no
Packaged: 2022-01-07 19:41:32 UTC; alex_
Author: Alejandro Platas-Lopez [aut, cre] (<https://orcid.org/0000-0002-2584-343X>), Alejandro Guerra-Hernandez [ths] (<https://orcid.org/0000-0002-4856-4011>)
Repository: CRAN
Date/Publication: 2022-01-10 17:42:44 UTC

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New package dictionaRy with initial version 0.1.1
Package: dictionaRy
Title: Retrieve the Dictionary Definitions of English Words
Version: 0.1.1
Depends: jsonlite, tibble
Maintainer: Steve Condylios <steve.condylios@gmail.com>
BugReports: https://github.com/stevecondylios/dictionaRy/issues
URL: https://github.com/stevecondylios/dictionaRy
Description: An R interface to the 'Free Dictionary API' <https://dictionaryapi.dev/>, <https://github.com/meetDeveloper/freeDictionaryAPI>. Retrieve dictionary definitions for English words, as well as additional information including phonetics, part of speech, origins, audio pronunciation, example usage, synonyms and antonyms, returned in 'tidy' format for ease of use.
License: MIT + file LICENSE
Encoding: UTF-8
NeedsCompilation: no
Packaged: 2022-01-08 05:00:29 UTC; st
Author: Steve Condylios [aut, cre] (<https://orcid.org/0000-0003-0599-844X>), Zane Dax [ctb]
Repository: CRAN
Date/Publication: 2022-01-10 17:52:47 UTC

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Package decompr updated to version 6.2.0 with previous version 6.0.0 dated 2021-05-09

Title: Global Value Chain Decomposition
Description: Three global value chain (GVC) decompositions are implemented. The Leontief decomposition derives the value added origin of exports by country and industry as in Hummels, Ishii and Yi (2001). The Koopman, Wang and Wei (2014) decomposition splits country-level exports into 9 value added components, and the Wang, Wei and Zhu (2013) decomposition splits bilateral exports into 16 value added components. Various GVC indicators based on these decompositions are computed in the complimentary 'gvc' package. --- References: --- Hummels, D., Ishii, J., & Yi, K. M. (2001). The nature and growth of vertical specialization in world trade. Journal of international Economics, 54(1), 75-96. Koopman, R., Wang, Z., & Wei, S. J. (2014). Tracing value-added and double counting in gross exports. American Economic Review, 104(2), 459-94. Wang, Z., Wei, S. J., & Zhu, K. (2013). Quantifying international production sharing at the bilateral and sector levels (No. w19677). National Bureau of Economic Research.
Author: Bastiaan Quast [aut, cre] (<https://orcid.org/0000-0002-2951-3577>), Fei Wang [aut], Victor Stolzenburg [aut], Oliver Reiter [ctb], Sebastian Krantz [ctb]
Maintainer: Bastiaan Quast <bquast@gmail.com>

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Package datasets.load updated to version 2.0.0 with previous version 1.6.0 dated 2021-05-10

Title: Interfaces for Loading Datasets
Description: Visual interface for loading datasets in RStudio from all installed (including unloaded) packages, also includes command line interfaces.
Author: Bastiaan quast [aut, cre] (<https://orcid.org/0000-0002-2951-3577>)
Maintainer: Bastiaan quast <bquast@gmail.com>

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Package kerastuneR updated to version 0.1.0.4 with previous version 0.1.0.3 dated 2020-10-04

Title: Interface to 'Keras Tuner'
Description: 'Keras Tuner' <https://keras-team.github.io/keras-tuner/> is a hypertuning framework made for humans. It aims at making the life of AI practitioners, hypertuner algorithm creators and model designers as simple as possible by providing them with a clean and easy to use API for hypertuning. 'Keras Tuner' makes moving from a base model to a hypertuned one quick and easy by only requiring you to change a few lines of code.
Author: Turgut Abdullayev [aut, cre], Google Inc. [cph]
Maintainer: Turgut Abdullayev <turqut.a.314@gmail.com>

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Package ISLR2 updated to version 1.3-1 with previous version 1.3 dated 2021-10-05

Title: Introduction to Statistical Learning, Second Edition
Description: We provide the collection of data-sets used in the book 'An Introduction to Statistical Learning with Applications in R, Second Edition'. These include many data-sets that we used in the first edition (some with minor changes), and some new datasets.
Author: Gareth James [aut], Daniela Witten [aut], Trevor Hastie [aut, cre], Rob Tibshirani [aut], Balasubramanian Narasimhan [ctb]
Maintainer: Trevor Hastie <hastie@stanford.edu>

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Package CGNM updated to version 0.1.1 with previous version 0.1.0 dated 2022-01-06

Title: Cluster Gauss-Newton Method
Description: Find multiple solutions of a nonlinear least squares problem. Cluster Gauss-Newton method does not assume uniqueness of the solution of the nonlinear least squares problem and compute approximate multiple minimizers. Please cite the following paper when this software is used in your research: Aoki et al. (2020) <doi:10.1007/s11081-020-09571-2>. Cluster Gauss–Newton method. Optimization and Engineering, 1-31.
Author: Yasunori Aoki
Maintainer: Yasunori Aoki <yaoki@uwaterloo.ca>

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Package jsTreeR updated to version 1.5.0 with previous version 1.4.0 dated 2021-09-19

Title: A Wrapper of the JavaScript Library 'jsTree'
Description: Creates interactive trees that can be included in 'Shiny' apps and R markdown documents. A tree allows to represent hierarchical data (e.g. the contents of a directory). Similar to the 'shinyTree' package but offers more features and options, such as the grid extension, restricting the drag-and-drop behavior, and settings for the search functionality. It is possible to attach some data to the nodes of a tree and then to get these data in 'Shiny' when a node is selected. Also provides a 'Shiny' gadget allowing to manipulate one or more folders.
Author: Stéphane Laurent [aut, cre], jQuery contributors [ctb, cph] (jQuery), Ivan Bozhanov [ctb, cph] (jsTree), Vedran Opacic [ctb, cph] (jsTree bootstrap theme), Avi Deitcher [ctb, cph] (jsTreeGrid), Philip Hutchison [ctb, cph] (PDFObject), Terence Eden [ctb, cph] (SuperTinyIcons)
Maintainer: Stéphane Laurent <laurent_step@outlook.fr>

Diff between jsTreeR versions 1.4.0 dated 2021-09-19 and 1.5.0 dated 2022-01-10

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Package ISOcodes updated to version 2022.01.10 with previous version 2021.02.24 dated 2021-02-24

Title: Selected ISO Codes
Description: ISO language, territory, currency, script and character codes. Provides ISO 639 language codes, ISO 3166 territory codes, ISO 4217 currency codes, ISO 15924 script codes, and the ISO 8859 character codes as well as the UN M.49 area codes.
Author: Christian Buchta [aut], Kurt Hornik [aut, cre] (<https://orcid.org/0000-0003-4198-9911>)
Maintainer: Kurt Hornik <Kurt.Hornik@R-project.org>

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Package midasml updated to version 0.1.9 with previous version 0.1.8 dated 2021-12-16

Title: Estimation and Prediction Methods for High-Dimensional Mixed Frequency Time Series Data
Description: The 'midasml' package implements estimation and prediction methods for high-dimensional mixed-frequency (MIDAS) time-series and panel data regression models. The regularized MIDAS models are estimated using orthogonal (e.g. Legendre) polynomials and sparse-group LASSO (sg-LASSO) estimator. For more information on the 'midasml' approach see Babii, Ghysels, and Striaukas (2021, JBES forthcoming) <doi:10.1080/07350015.2021.1899933>. The package is equipped with the fast implementation of the sg-LASSO estimator by means of proximal block coordinate descent. High-dimensional mixed frequency time-series data can also be easily manipulated with functions provided in the package.
Author: Jonas Striaukas [cre, aut], Andrii Babii [aut], Eric Ghysels [aut], Alex Kostrov [ctb] (Contributions to analytical gradients for non-linear low-dimensional MIDAS estimation code)
Maintainer: Jonas Striaukas <jonas.striaukas@gmail.com>

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Package wrProteo updated to version 1.5.0 with previous version 1.4.3 dated 2021-07-13

Title: Proteomics Data Analysis Functions
Description: Data analysis of proteomics experiments by mass spectrometry is supported by this collection of functions mostly dedicated to the analysis of (bottom-up) quantitative (XIC) data. Fasta-formatted proteomes (eg from UniProt Consortium <doi:10.1093/nar/gky1049>) can be read with automatic parsing and multiple annotation types (like species origin, abbreviated gene names, etc) extracted. Quantitative proteomics measurements frequently contain multiple NA values, due to physical absence of given peptides in some samples, limitations in sensitivity or other reasons. The functions provided here help to inspect graphically the data to investigate the nature of NA-values via their respective replicate measurements and to help/confirm the choice of NA-replacement by low random values. Dedicated filtering and statistical testing using the framework of package 'limma' <doi:10.18129/B9.bioc.limma> can be run, enhanced by multiple rounds of NA-replacements to provide robustness towards rare stochastic events. Multi-species samples, as frequently used in benchmark-tests (eg Navarro et al 2016 <doi:10.1038/nbt.3685>, Ramus et al 2016 <doi:10.1016/j.jprot.2015.11.011>), can be run with special options separating the data into sub-groups during normalization and testing. As example the data-set from Ramus et al 2016 <doi:10.1016/j.jprot.2015.11.011>) is provided quantified by MaxQuant (Tyanova et al 2016 <doi:10.1038/nprot.2016.136>), ProteomeDiscoverer, OpenMS (<doi:10.1038/nmeth.3959>) and Proline (Bouyssie et al 2020 <doi:10.1093/bioinformatics/btaa118>). Meta-data provided in sdrf format can be integrated to the analysis. Subsequently, ROC curves (Hand and Till 2001 <doi:10.1023/A:1010920819831>) can be constructed to compare multiple analysis approaches.
Author: Wolfgang Raffelsberger [aut, cre]
Maintainer: Wolfgang Raffelsberger <w.raffelsberger@gmail.com>

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Package tesseract updated to version 5.0.0 with previous version 4.2.0 dated 2021-12-03

Title: Open Source OCR Engine
Description: Bindings to 'Tesseract' <https://opensource.google/projects/tesseract>: a powerful optical character recognition (OCR) engine that supports over 100 languages. The engine is highly configurable in order to tune the detection algorithms and obtain the best possible results.
Author: Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>)
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>

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Package rddtools updated to version 1.6.0 with previous version 1.5.0 dated 2021-05-16

Title: Toolbox for Regression Discontinuity Design ('RDD')
Description: Set of functions for Regression Discontinuity Design ('RDD'), for data visualisation, estimation and testing.
Author: Matthieu Stigler [aut] (<https://orcid.org/0000-0002-6802-4290>), Bastiaan Quast [aut, cre] (<https://orcid.org/0000-0002-2951-3577>)
Maintainer: Bastiaan Quast <bquast@gmail.com>

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Package multiplex updated to version 2.9.7 with previous version 2.9.6 dated 2021-09-08

Title: Algebraic Tools for the Analysis of Multiple Social Networks
Description: Algebraic procedures for the analysis of multiple social networks are delivered with this package as described in Ostoic (2020) <DOI:10.18637/jss.v092.i11>. Among other things, it makes it possible to create and manipulate multiplex, multimode, and multilevel network data with different formats. There are effective ways available to treat multiple networks with routines that combine algebraic systems like the partially ordered semigroup or the semiring structure with the relational bundles occurring in different types of multivariate network data sets. It also provides an algebraic approach for affiliation networks through Galois derivations between families of the pairs of subsets in the two domains.
Author: Antonio Rivero Ostoic [aut, cre]
Maintainer: Antonio Rivero Ostoic <multiplex@post.com>

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Package JGR updated to version 1.9-1 with previous version 1.9-0 dated 2022-01-03

Title: Java GUI for R
Description: Java GUI for R - cross-platform, universal and unified Graphical User Interface for R. For full functionality on Windows and Mac OS X JGR requires a start application which depends on your OS.
Author: Markus Helbig <mhelbig81@googlemail.com>, Simon Urbanek, Ian Fellows
Maintainer: Markus Helbig <mhelbig81@googlemail.com>

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Package grpsel updated to version 1.2.0 with previous version 1.1.1 dated 2021-07-13

Title: Group Subset Selection
Description: Provides tools for sparse regression modelling with grouped predictors using the group subset selection penalty. Uses coordinate descent and local search algorithms to rapidly deliver near optimal estimates. The group subset penalty can be combined with a group lasso or ridge penalty for added shrinkage. Linear and logistic regression are supported, as are overlapping groups.
Author: Ryan Thompson [aut, cre] (<https://orcid.org/0000-0002-9002-0448>)
Maintainer: Ryan Thompson <ryan.thompson@monash.edu>

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Package diseq updated to version 0.4.1 with previous version 0.3.1 dated 2021-05-11

Title: Estimation Methods for Markets in Equilibrium and Disequilibrium
Description: Provides estimation methods for markets in equilibrium and disequilibrium. Supports the estimation of an equilibrium and four disequilibrium models with both correlated and independent shocks. Also provides post-estimation analysis tools, such as aggregation, marginal effect, and shortage calculations. The estimation methods are based on full information maximum likelihood techniques given in Maddala and Nelson (1974) <doi:10.2307/1914215>. They are implemented using the analytic derivative expressions calculated in Karapanagiotis (2020) <doi:10.2139/ssrn.3525622>. Standard errors can be estimated by adjusting for heteroscedasticity or clustering. The equilibrium estimation constitutes a case of a system of linear, simultaneous equations. Instead, the disequilibrium models replace the market-clearing condition with a non-linear, short-side rule and allow for different specifications of price dynamics.
Author: Pantelis Karapanagiotis [aut, cre] (<https://orcid.org/0000-0001-9871-1908>)
Maintainer: Pantelis Karapanagiotis <pikappa.devel@gmail.com>

Diff between diseq versions 0.3.1 dated 2021-05-11 and 0.4.1 dated 2022-01-10

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Package criticalpath updated to version 0.2.0 with previous version 0.1.0 dated 2021-02-05

Title: An Implementation of the Critical Path Method
Description: An R implementation of the Critical Path Method (CPM). CPM is a method used to estimate the minimum project duration and determine the amount of scheduling flexibility on the logical network paths within the schedule model. The flexibility is in terms of early start, early finish, late start, late finish, total float and free float. Beside, it permits to quantify the complexity of network diagram through the analysis of topological indicators. Finally, it permits to change the activities duration to perform what-if scenario analysis. The package was built based on following references: To make topological sorting and other graph operation, we use Csardi, G. & Nepusz, T. (2005) <https://www.researchgate.net/publication/221995787_The_Igraph_Software_Package_for_Complex_Network_Research>; For schedule concept, the reference was Project Management Institute (2017) <https://www.pmi.org/pmbok-guide-standards/foundational/pmbok>; For standards terms, we use Project Management Institute (2017) <https://www.pmi.org/pmbok-guide-standards/lexicon>; For algorithms on Critical Path Method development, we use Vanhoucke, M. (2013) <doi:10.1007/978-3-642-40438-2> and Vanhoucke, M. (2014) <doi:10.1007/978-3-319-04331-9>; And, finally, for topological definitions, we use Vanhoucke, M. (2009) <doi:10.1007/978-1-4419-1014-1>.
Author: Rubens Jose Rosa [aut, cre], Marcos dos Santos [aut], Thiago Marques [aut]
Maintainer: Rubens Jose Rosa <rubens@rubensjoserosa.com>

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New package CatPredi with initial version 1.3
Package: CatPredi
Title: Optimal Categorisation of Continuous Variables in Prediction Models
Version: 1.3
Date: 2022-01-10
Imports: survival, rms, rgenoud, mgcv, stats, graphics
Description: Allows the user to categorise a continuous predictor variable in a logistic or a Cox proportional hazards regression setting, by maximising the discriminative ability of the model. I Barrio, I Arostegui, MX Rodriguez-Alvarez, JM Quintana (2015) <doi:10.1177/0962280215601873>. I Barrio, MX Rodriguez-Alvarez, L Meira-Machado, C Esteban, I Arostegui (2017) <https://www.idescat.cat/sort/sort411/41.1.3.barrio-etal.pdf>.
License: GPL
NeedsCompilation: no
Packaged: 2022-01-10 11:07:32 UTC; 877613
Author: Irantzu Barrio [aut, cre], Maria Xose Rodriguez-Alvarez [aut], Inmaculada Arostegui [ctb]
Maintainer: Irantzu Barrio <irantzu.barrio@ehu.eus>
Repository: CRAN
Date/Publication: 2022-01-10 12:43:01 UTC

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Package AlphaPart updated to version 0.9.0 with previous version 0.8.4 dated 2021-10-22

Title: Partition/Decomposition of Breeding Values by Paths of Information
Description: A software that implements a method for partitioning genetic trends to quantify the sources of genetic gain in breeding programmes. The partitioning method is described in Garcia-Cortes et al. (2008) <doi:10.1017/S175173110800205X>. The package includes the main function AlphaPart for partitioning breeding values and auxiliary functions for manipulating data and summarizing, visualizing, and saving results.
Author: Gregor Gorjanc [aut, cre] (<https://orcid.org/0000-0001-8008-2787>), Jana Obsteter [aut] (<https://orcid.org/0000-0003-1511-3916>), Thiago de Paula Oliveira [aut] (<https://orcid.org/0000-0002-4555-2584>)
Maintainer: Gregor Gorjanc <highlander.research.lab@gmail.com>

Diff between AlphaPart versions 0.8.4 dated 2021-10-22 and 0.9.0 dated 2022-01-10

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New package toprdata with initial version 1.0.0
Package: toprdata
Title: Gene and Exon Data from Ensembl
Version: 1.0.0
Description: Gene and exon information from Ensembl (build GRCh38.p13) to use with the topr package.
License: LGPL (>= 3)
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
Suggests: testthat (>= 3.0.0), knitr, rmarkdown, markdown
Imports:
Depends: R (>= 3.5.0)
NeedsCompilation: no
Packaged: 2022-01-07 18:28:24 UTC; thorhildur
Author: Genuity Science [cph], Thorhildur Juliusdottir [aut, cre], Andri Stefansson [aut]
Maintainer: Thorhildur Juliusdottir <thorhildur@genuitysci.com>
Repository: CRAN
Date/Publication: 2022-01-10 10:40:02 UTC

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New package sjSDM with initial version 1.0.0
Package: sjSDM
Title: Scalable Joint Species Distribution Modeling
Version: 1.0.0
Date: 2022-01-05
Description: A scalable method to estimate joint Species Distribution Models (jSDMs) for big community datasets based on a Monte Carlo approximation of the joint likelihood. The numerical approximation is based on 'PyTorch' and 'reticulate', and can be run on CPUs and GPUs alike. The method is described in Pichler & Hartig (2021) <doi:10.1111/2041-210X.13687>. The package contains various extensions, including support for different response families, ability to account for spatial autocorrelation, and deep neural networks instead of the linear predictor in jSDMs.
License: GPL-3
Encoding: UTF-8
Depends: R (>= 3.0)
Imports: reticulate, stats, mvtnorm, utils, rstudioapi, abind, graphics, grDevices, Metrics, parallel, mgcv, Ternary, cli, crayon, ggplot2, checkmate, mathjaxr
Suggests: testthat, knitr, rmarkdown
URL: https://theoreticalecology.github.io/s-jSDM/
BugReports: https://github.com/TheoreticalEcology/s-jSDM/issues
VignetteBuilder: knitr
RdMacros: mathjaxr
NeedsCompilation: no
Packaged: 2022-01-07 16:41:45 UTC; maximilianpichler
Author: Maximilian Pichler [aut, cre] (<https://orcid.org/0000-0003-2252-8327>), Florian Hartig [aut] (<https://orcid.org/0000-0002-6255-9059>), Wang Cai [ctb]
Maintainer: Maximilian Pichler <maximilian.pichler@biologie.uni-regensburg.de>
Repository: CRAN
Date/Publication: 2022-01-10 10:10:02 UTC

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New package ggESDA with initial version 0.1.0
Package: ggESDA
Title: Exploratory Symbolic Data Analysis with 'ggplot2'
Version: 0.1.0
Author: Bo-Syue Jiang
Maintainer: Bo-Syue Jiang <lukajiang1998@gmail.com>
Description: Implements an extension of 'ggplot2' and visualizes the symbolic data with multiple plot which can be adjusted by more general and flexible input arguments. It also provides a function to transform the classical data to symbolic data by both clustering algorithm and customized method.
Depends: ggplot2, R (>= 3.5.0), tidyverse
Suggests: testthat (>= 2.1.0), knitr, rmarkdown
Imports: RSDA, rlang, R6, stats, dplyr, tidyr, gridExtra, gtools, stringr, prodlim, ggforce, ggpubr, ggthemes, tibble, magrittr
License: GPL (>= 2)
Encoding: UTF-8
LazyData: true
VignetteBuilder: knitr
URL: https://github.com/kiangkiangkiang/ggESDA
BugReports: https://github.com/kiangkiangkiang/ggESDA/issues
NeedsCompilation: no
Packaged: 2022-01-07 15:53:47 UTC; user
Repository: CRAN
Date/Publication: 2022-01-10 10:02:42 UTC

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New package exceldata with initial version 0.1.0
Package: exceldata
Title: Streamline Data Import, Cleaning and Recoding from 'Excel'
Version: 0.1.0
Description: A small group of functions to read in a data dictionary and the corresponding data table from 'Excel' and to automate the cleaning, re-coding and creation of simple calculated variables. This package was designed to be a companion to the macro-enabled 'Excel' template available on the GitHub site, but works with any similarly-formatted 'Excel' data.
License: MIT + file LICENSE
Encoding: UTF-8
Imports: dplyr, ggplot2, graphics, lubridate, readxl, scales
Suggests: knitr, rmarkdown
NeedsCompilation: no
Packaged: 2022-01-07 15:56:17 UTC; lisa
Author: Lisa Avery [aut, cre, cph] (<https://orcid.org/0000-0002-8431-5143>)
Maintainer: Lisa Avery <lisa.avery@uhn.ca>
Repository: CRAN
Date/Publication: 2022-01-10 10:12:43 UTC

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Package efdm updated to version 0.2.0 with previous version 0.1.0 dated 2021-08-16

Title: Simulate Forest Resources with the European Forestry Dynamics Model
Description: An implementation of European Forestry Dynamics Model (EFDM) and an estimation algorithm for the transition probabilities. The EFDM is a large-scale forest model that simulates the development of the forest and estimates volume of wood harvested for any given forested area. This estimate can be broken down by, for example, species, site quality, management regime and ownership category. See Packalen et al. (2015) <doi:10.2788/153990>.
Author: Mikko Kuronen [aut, cre] (<https://orcid.org/0000-0002-8089-7895>), Minna Räty [aut] (<https://orcid.org/0000-0001-9898-8712>)
Maintainer: Mikko Kuronen <mikko.kuronen@luke.fi>

Diff between efdm versions 0.1.0 dated 2021-08-16 and 0.2.0 dated 2022-01-10

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 efdm-0.2.0/efdm/R/activity.r                    |  123 +---
 efdm-0.2.0/efdm/R/core.r                        |    2 
 efdm-0.2.0/efdm/R/data-example.r                |   15 
 efdm-0.2.0/efdm/R/estim.r                       |   91 ++-
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 efdm-0.2.0/efdm/tests/test_split.R              |   25 
 efdm-0.2.0/efdm/tests/test_split.Rout.save      |   25 
 efdm-0.2.0/efdm/tests/test_transprobs.R         |    5 
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 30 files changed, 1692 insertions(+), 888 deletions(-)

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New package dail with initial version 1.0
Package: dail
Title: Data from Access to Information Law
Version: 1.0
Description: Downloads the public data available from the Brazilian Access to Information Law and and performs a search on information requests made since 2015.
License: MIT + file LICENSE
Encoding: UTF-8
Imports: dplyr, magrittr, plyr, R.utils, readr, stopwords, stringr, tidytext
Suggests: testthat (>= 3.0.0)
NeedsCompilation: no
Packaged: 2022-01-07 16:40:38 UTC; igorl
Author: Igor Laltuf [aut, cre] (<https://orcid.org/0000-0002-5614-4404>)
Maintainer: Igor Laltuf <igorlaltuf@gmail.com>
Repository: CRAN
Date/Publication: 2022-01-10 10:12:46 UTC

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Package modcmfitr (with last version 0.1.0) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2017-10-22 0.1.0

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New package rbcb with initial version 0.1.7
Package: rbcb
Title: R Interface to Brazilian Central Bank Web Services
Version: 0.1.7
Author: Wilson Freitas <wilson.freitas@gmail.com>
Maintainer: Wilson Freitas <wilson.freitas@gmail.com>
Description: The Brazilian Central Bank API delivers many datasets which regard economic activity, regional economy, international economy, public finances, credit indicators and many more. For more information please see <http://dadosabertos.bcb.gov.br/>. These datasets can be accessed through 'rbcb' functions and can be obtained in different data structures common to R ('tibble', 'data.frame', 'xts', ...).
URL: https://github.com/wilsonfreitas/rbcb
BugReports: https://github.com/wilsonfreitas/rbcb/issues
License: MIT + file LICENSE
Encoding: UTF-8
Imports: httr, jsonlite, tibble, xts, xml2, utils, stats, methods
Suggests: testthat, miniUI, shiny
NeedsCompilation: no
Packaged: 2022-01-06 19:56:23 UTC; wilso
Repository: CRAN
Date/Publication: 2022-01-10 08:42:42 UTC

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New package pomodoro with initial version 3.3.0
Package: pomodoro
Title: Predictive Power of Linear and Tree Modeling
Version: 3.3.0
Author: Seyma Kalay <seymakalay@hotmail.com>
Maintainer: Seyma Kalay <seymakalay@hotmail.com>
Description: Runs generalized and multinominal logistic (GLM and MLM) models, as well as random forest (RF), Bagging (BAG), and Boosting (BOOST). This package prints out to predictive outcomes easy for the selected data and data splits.
License: GPL-3
Encoding: UTF-8
LazyData: true
URL: https://github.com/seymakalay/pomodoro
BugReports: https://github.com/seymakalay/pomodoro/issues
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
Imports: tibble, dplyr, readr, caret, gbm, stats, randomForest, pROC, ipred
Depends: R (>= 2.10)
NeedsCompilation: no
Packaged: 2022-01-06 16:20:44 UTC; seyma
Repository: CRAN
Date/Publication: 2022-01-10 08:32:42 UTC

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Package pARI updated to version 1.1.1 with previous version 1.1.0 dated 2021-11-18

Title: Permutation-Based All-Resolutions Inference Method
Description: It computes the All-Resolution Inference method in the permutation framework, i.e., simultaneous lower confidence bounds for the number of true discoveries. <arXiv:2012.00368>.
Author: Angela Andreella [aut, cre] (Main author, <https://orcid.org/0000-0002-1141-3041>)
Maintainer: Angela Andreella <angela.andreella@unipd.it>

Diff between pARI versions 1.1.0 dated 2021-11-18 and 1.1.1 dated 2022-01-10

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 pARI-1.1.1/pARI/NAMESPACE                   |    1 
 pARI-1.1.1/pARI/NEWS.md                     |    4 ++
 pARI-1.1.1/pARI/R/dI.R                      |    8 ++++-
 pARI-1.1.1/pARI/R/discoveriesPerm.R         |   14 ++++-----
 pARI-1.1.1/pARI/R/lambdaOpt.R               |    8 ++++-
 pARI-1.1.1/pARI/R/oneSamplePar.R            |   19 +++++-------
 pARI-1.1.1/pARI/R/pARIbrain.R               |   23 +++++++-------
 pARI-1.1.1/pARI/R/plotNullDistribution.R    |   10 +++++-
 pARI-1.1.1/pARI/R/rowVariance.R             |   14 ++++-----
 pARI-1.1.1/pARI/R/simulateData.R            |    3 +
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 pARI-1.1.1/pARI/inst/doc/pARI_vignette.html |   16 +++++-----
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 24 files changed, 131 insertions(+), 93 deletions(-)

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New package logitFD with initial version 1.0
Package: logitFD
Title: Functional Principal Components Logistic Regression
Version: 1.0
Date: 2021-12-22
Author: Carmen Lucia Reina <carmenlureina@gmail.com> Ana Maria Aguilera <aaguiler@ugr.es> and Manuel Escabias <escabias@ugr.es>
Description: Functions for fitting a functional principal components logit regression model in four different situations: ordinary and filtered functional principal components of functional predictors, included in the model according to their variability explanation power, and according to their prediction ability by stepwise methods. The proposed methods were developed in Escabias et al (2004) <doi:10.1080/10485250310001624738> and Escabias et al (2005) <doi:10.1016/j.csda.2005.03.011>.
Depends: R (>= 3.4.3)
License: GPL (>= 2)
Imports: fda, expm, pROC, fda.usc
Encoding: UTF-8
Maintainer: Manuel Escabias <escabias@ugr.es>
NeedsCompilation: no
Packaged: 2022-01-07 12:35:25 UTC; escabias
Repository: CRAN
Date/Publication: 2022-01-10 08:52:43 UTC

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New package httptest2 with initial version 0.1.0
Package: httptest2
Title: Test Helpers for 'httr2'
Description: Testing and documenting code that communicates with remote servers can be painful. This package helps with writing tests for packages that use 'httr2'. It enables testing all of the logic on the R sides of the API without requiring access to the remote service, and it also allows recording real API responses to use as test fixtures. The ability to save responses and load them offline also enables writing vignettes and other dynamic documents that can be distributed without access to a live server.
Version: 0.1.0
URL: https://enpiar.com/httptest2/, https://github.com/nealrichardson/httptest2
BugReports: https://github.com/nealrichardson/httptest2/issues
License: MIT + file LICENSE
Imports: digest, httr2, jsonlite, rlang, stats, testthat, utils
Suggests: curl, knitr, pkgload, rmarkdown, spelling, xml2
Language: en-US
Encoding: UTF-8
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2022-01-07 13:39:23 UTC; enpiar
Author: Neal Richardson [aut, cre], Jonathan Keane [ctb], Maëlle Salmon [ctb] (<https://orcid.org/0000-0002-2815-0399>)
Maintainer: Neal Richardson <neal.p.richardson@gmail.com>
Repository: CRAN
Date/Publication: 2022-01-10 08:52:45 UTC

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Package FRK updated to version 2.0.3 with previous version 2.0.2 dated 2021-11-16

Title: Fixed Rank Kriging
Description: Fixed Rank Kriging is a tool for spatial/spatio-temporal modelling and prediction with large datasets. The approach models the field, and hence the covariance function, using a set of r basis functions, where r is typically much smaller than the number of data points (or polygons) m. This low-rank basis-function representation facilitates the modelling of 'big' spatial/spatio-temporal data. The method naturally allows for non-stationary, anisotropic covariance functions. Discretisation of the spatial domain into so-called basic areal units (BAUs) facilitates the use of observations with varying support (i.e., both point-referenced and areal supports, potentially simultaneously), and prediction over arbitrary user-specified regions. `FRK` also supports inference over various manifolds, including the 2D plane and 3D sphere, and it provides helper functions to model, fit, predict, and plot with relative ease. Version 2.0.0 and above of the package `FRK` also supports modelling of non-Gaussian data, by employing a spatial generalised linear mixed model (GLMM) framework to cater for Poisson, binomial, negative-binomial, gamma, and inverse-Gaussian distributions. Zammit-Mangion and Cressie <doi:10.18637/jss.v098.i04> describe `FRK` in a Gaussian setting, and detail its use of basis functions and BAUs.
Author: Andrew Zammit-Mangion [aut, cre], Matthew Sainsbury-Dale [aut]
Maintainer: Andrew Zammit-Mangion <andrewzm@gmail.com>

Diff between FRK versions 2.0.2 dated 2021-11-16 and 2.0.3 dated 2022-01-10

 DESCRIPTION                   |    8 ++++----
 MD5                           |   14 +++++++-------
 R/SRE.R                       |    8 ++++----
 R/SREfit.R                    |   12 +++++++-----
 R/basisfns.R                  |   15 ++++++++++-----
 R/check_args.R                |    8 ++++----
 inst/doc/FRK_intro.pdf        |binary
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 8 files changed, 36 insertions(+), 29 deletions(-)

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New package glmxdiag with initial version 1.0.0
Package: glmxdiag
Version: 1.0.0
Date: 2022-01-04
Title: A Collection of Graphic Tools for GLM Diagnostics and some Extensions
Depends: R (>= 3.6.0)
Description: Provides diagnostic graphic tools for GLMs, beta-binomial regression model (estimated by 'VGAM' package), beta regression model (estimated by 'betareg' package) and negative binomial regression model (estimated by 'MASS' package). Since most of functions implemented in 'glmxdiag' already exist in other packages, the aim is to provide the user unique functions that work on almost all regression models previously specified. Details about some of the implemented functions can be found in Brown (1992) <doi:10.2307/2347617>, Dunn and Smyth (1996) <doi:10.2307/1390802>, O'Hara Hines and Carter (1993) <doi:10.2307/2347405>, Wang (1985) <doi:10.2307/1269708>.
License: GPL (>= 2)
NeedsCompilation: no
Packaged: 2022-01-06 13:18:39 UTC; peppe
Author: Giuseppe Reale [aut, cre]
Maintainer: Giuseppe Reale <giuseppe.reale97@gmail.com>
Imports: VGAM
Repository: CRAN
Date/Publication: 2022-01-10 08:32:45 UTC

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New package free with initial version 1.0
Package: free
Title: Regularized Estimating Equations
Version: 1.0
Date: 2021-12-21
Description: Unified regularized estimating equation solver. Currently the package includes one solver with the l1 penalty only. More solvers and penalties are under development. Reference: Yi Yang, Yuwen Gu, Yue Zhao, Jun Fan (2021) <arXiv:2110.11074>.
License: GPL-3
Imports: Rcpp (>= 1.0.7)
LinkingTo: Rcpp, RcppArmadillo
Encoding: UTF-8
Suggests: testthat (>= 3.0.0)
NeedsCompilation: yes
Packaged: 2022-01-07 00:40:00 UTC; YLIAN
Author: Yi Lian [aut, cre], Yi Yang [aut, cph], Sahir Bhatnagar [aut], Robert W. Platt [aut]
Maintainer: Yi Lian <yi.lian@mail.mcgill.ca>
Repository: CRAN
Date/Publication: 2022-01-10 08:42:46 UTC

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Package RMVL updated to version 0.0.4.3 with previous version 0.0.4.1 dated 2021-12-07

Title: Mappable Vector Library for Handling Large Datasets
Description: Mappable vector library provides convenient way to access large datasets. Use all of your data at once, with few limits. Memory mapped data can be shared between multiple R processes. Access speed depends on storage medium, so solid state drive is recommended, preferably with PCI Express (or M.2 nvme) interface or a fast network file system. The data is memory mapped into R and then accessed using usual R list and array subscription operators. Convenience functions are provided for merging, grouping and indexing large vectors and data.frames. The layout of underlying MVL files is optimized for large datasets. The vectors are stored to guarantee alignment for vector intrinsics after memory map. The package is built on top of libMVL, which can be used as a standalone C library. libMVL has simple C API making it easy to interchange datasets with outside programs.
Author: Vladimir Dergachev [aut, cre] (<https://orcid.org/0000-0003-4708-6625>)
Maintainer: Vladimir Dergachev <support@altumrete.com>

Diff between RMVL versions 0.0.4.1 dated 2021-12-07 and 0.0.4.3 dated 2022-01-10

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Package multid updated to version 0.3.0 with previous version 0.2.0 dated 2021-10-22

Title: Multivariate Difference Between Two Groups
Description: Estimation of multivariate differences between two groups (e.g., multivariate sex differences) with regularized regression methods and predictive approach. See Lönnqvist & Ilmarinen (2021) <doi:10.1007/s11109-021-09681-2> and Ilmarinen et al. (2021) <doi:10.31234/osf.io/j59bs>.
Author: Ville-Juhani Ilmarinen [aut, cre] (<https://orcid.org/0000-0001-9493-379X>)
Maintainer: Ville-Juhani Ilmarinen <vj.ilmarinen@gmail.com>

Diff between multid versions 0.2.0 dated 2021-10-22 and 0.3.0 dated 2022-01-10

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Package hhsmm updated to version 0.2.4 with previous version 0.2.3 dated 2021-12-01

Title: Hidden Hybrid Markov/Semi-Markov Model Fitting
Description: Develops algorithms for fitting, prediction, simulation and initialization of the hidden hybrid Markov/semi-Markov model, introduced by Guedon (2005) <doi:10.1016/j.csda.2004.05.033>, which also includes several tools for handling missing data, nonparametric mixture of B-splines emissions (Langrock et al., 2015 <doi:10.1111/biom.12282>), fitting regime switching regression (Kim et al., 2008 <doi:10.1016/j.jeconom.2007.10.002>) and auto-regressive hidden hybrid Markov/semi-Markov model, and many other useful tools (read for more description: <arXiv:2109.12489>).
Author: Morteza Amini [aut, cre, cph], Afarin Bayat [aut], Reza Salehian [aut]
Maintainer: Morteza Amini <morteza.amini@ut.ac.ir>

Diff between hhsmm versions 0.2.3 dated 2021-12-01 and 0.2.4 dated 2022-01-10

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Package fitzRoy updated to version 1.1.0 with previous version 1.0.0 dated 2021-03-16

Title: Easily Scrape and Process AFL Data
Description: An easy package for scraping and processing Australia Rules Football (AFL) data. 'fitzRoy' provides a range of functions for accessing publicly available data from 'AFL Tables' <https://afltables.com/afl/afl_index.html>, 'Footy Wire' <https://www.footywire.com> and 'The Squiggle' <https://squiggle.com.au>. Further functions allow for easy processing, cleaning and transformation of this data into formats that can be used for analysis.
Author: James Day [cre, aut], Robert Nguyen [aut], Matthew Erbs [ctb], Oscar Lane [aut], Jason Zivkovic [ctb], Jacob Holden [ctb]
Maintainer: James Day <jamesthomasday@gmail.com>

Diff between fitzRoy versions 1.0.0 dated 2021-03-16 and 1.1.0 dated 2022-01-10

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 62 files changed, 808 insertions(+), 515 deletions(-)

More information about fitzRoy at CRAN
Permanent link

Package DArand (with last version 0.0.1.1) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2021-10-25 0.0.1.1
2021-09-27 0.0.1.0

Permanent link
Package Evapotranspiration updated to version 1.16 with previous version 1.15 dated 2020-06-01

Title: Modelling Actual, Potential and Reference Crop Evapotranspiration
Description: Uses data and constants to calculate potential evapotranspiration (PET) and actual evapotranspiration (AET) from 21 different formulations including Penman, Penman-Monteith FAO 56, Priestley-Taylor and Morton formulations.
Author: Danlu Guo [aut, cre] <danlu.guo@adelaide.edu.au>, Seth Westra [aut] <swestra@civeng.adelaide.edu.au>, Tim Peterson [ctb] <tim.peterson@monash.edu>
Maintainer: Danlu Guo <danlu.guo@unimelb.edu.au>

Diff between Evapotranspiration versions 1.15 dated 2020-06-01 and 1.16 dated 2022-01-10

 DESCRIPTION            |    8 ++++----
 MD5                    |    8 ++++----
 NEWS                   |   11 ++++++-----
 R/Evapotranspiration.R |   27 ++++++++++++++++-----------
 man/constants.Rd       |   28 +++++++++++++++++++++++++++-
 5 files changed, 57 insertions(+), 25 deletions(-)

More information about Evapotranspiration at CRAN
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