Title: Generates Expectations for 'testthat' Unit Testing
Description: Helps systematize and ease the process of
building unit tests with the 'testthat' package by providing
tools for generating expectations.
Author: Ludvig Renbo Olsen [aut, cre],
R. Mark Sharp [ctb]
Maintainer: Ludvig Renbo Olsen <r-pkgs@ludvigolsen.dk>
Diff between xpectr versions 0.4.1 dated 2021-10-03 and 0.4.2 dated 2022-01-19
DESCRIPTION | 6 +++--- MD5 | 24 ++++++++++++------------ NEWS.md | 4 ++++ README.md | 6 ++++-- build/xpectr.pdf |binary inst/doc/readme.R | 2 +- inst/doc/readme.Rmd | 2 +- inst/doc/readme.html | 6 +++--- tests/testthat/test_addin_utils.R | 21 ++++++++++++--------- tests/testthat/test_create_expectations.R | 11 ++++++----- tests/testthat/test_prepare_insertion.R | 16 ++++++++-------- tests/testthat/test_sample.R | 8 ++++---- vignettes/readme.Rmd | 2 +- 13 files changed, 59 insertions(+), 49 deletions(-)
Title: RDF Library Bindings in R
Description: Provides methods to parse, query and serialize information
stored in the Resource Description Framework (RDF). RDF is described at <https://www.w3.org/TR/rdf-primer/>.
This package supports RDF by implementing an R interface to the Redland RDF C library,
described at <https://librdf.org/docs/api/index.html>. In brief, RDF provides a structured graph
consisting of Statements composed of Subject, Predicate, and Object Nodes.
Author: Matthew B. Jones [aut, cre],
Peter Slaughter [aut],
Jeroen Ooms [aut],
Carl Boettiger [aut],
Scott Chamberlain [aut],
David Beckett [cph],
University of Bristol [cph],
Regents of the University of California [cph]
Maintainer: Matthew B. Jones <jones@nceas.ucsb.edu>
Diff between redland versions 1.0.17-15 dated 2021-12-17 and 1.0.17-16 dated 2022-01-19
redland-1.0.17-15/redland/inst/Makefile |only redland-1.0.17-15/redland/inst/config.log |only redland-1.0.17-15/redland/inst/config.status |only redland-1.0.17-15/redland/tools/Makefile |only redland-1.0.17-15/redland/tools/NEWS |only redland-1.0.17-15/redland/tools/README |only redland-1.0.17-15/redland/tools/aclocal.m4 |only redland-1.0.17-15/redland/tools/config.log |only redland-1.0.17-15/redland/tools/config.status |only redland-1.0.17-16/redland/DESCRIPTION | 8 +-- redland-1.0.17-16/redland/MD5 | 37 +++++---------- redland-1.0.17-16/redland/NEWS | 6 ++ redland-1.0.17-16/redland/R/Query.R | 2 redland-1.0.17-16/redland/R/redland-package.R | 4 - redland-1.0.17-16/redland/R/redland.R | 2 redland-1.0.17-16/redland/build/vignette.rds |binary redland-1.0.17-16/redland/cleanup | 1 redland-1.0.17-16/redland/inst/COPYRIGHTS | 2 redland-1.0.17-16/redland/inst/NOTICE | 2 redland-1.0.17-16/redland/inst/WORDLIST | 1 redland-1.0.17-16/redland/inst/doc/redland_overview.html | 4 - redland-1.0.17-16/redland/man/Query-class.Rd | 10 ++-- redland-1.0.17-16/redland/man/redland.Rd | 8 +-- redland-1.0.17-16/redland/src/redland.c | 34 ++++++------- 24 files changed, 59 insertions(+), 62 deletions(-)
Title: Makes 'R' Easier for 'SAS®' Programmers
Description: A meta-package that aims to make 'R' easier for 'SAS®' programmers.
This set of packages brings many familiar concepts to 'R', including
data libraries, data dictionaries, formats
and format catalogs, a data step, and a traceable log. The 'flagship'
package is a reporting package that can output in text, rich text, 'PDF' and
'HTML' file formats.
Author: David J. Bosak
Maintainer: David Bosak <dbosak01@gmail.com>
Diff between sassy versions 1.0.6 dated 2021-11-24 and 1.0.7 dated 2022-01-19
DESCRIPTION | 6 +++--- MD5 | 15 +++++++++------ NEWS.md | 4 ++++ README.md | 2 +- inst/doc/sassy-faq.Rmd | 2 +- inst/doc/sassy-faq.html | 2 +- man/images/favicon.ico |only man/images/logo.png |only man/images/logo_back.png |only vignettes/sassy-faq.Rmd | 2 +- 10 files changed, 20 insertions(+), 13 deletions(-)
Title: Complex Matrix Algebra with 'Eigen'
Description: Matrix algebra using the 'Eigen' C++ library: determinant, rank, inverse, pseudo-inverse, kernel and image, QR decomposition, Cholesky decomposition, linear least-squares problems. Also provides matrix functions such as exponential, logarithm, power, sine and cosine. Complex matrices are supported.
Author: Stéphane Laurent
Maintainer: Stéphane Laurent <laurent_step@outlook.fr>
Diff between EigenR versions 1.1.0 dated 2021-12-23 and 1.2.0 dated 2022-01-19
DESCRIPTION | 8 - MD5 | 31 +++--- NAMESPACE | 55 ++++++----- NEWS.md | 20 ++++ R/EigenR.R | 210 ++++++++++++++++++++++++++++++++++++++++--- R/RcppExports.R | 56 +++++++++++ R/internal.R | 8 + README.md | 91 ++++++++++++------ man/Eigen_absdet.Rd |only man/Eigen_isInjective.Rd |only man/Eigen_isInvertible.Rd |only man/Eigen_isSurjective.Rd |only man/Eigen_kernelDimension.Rd |only man/Eigen_logabsdet.Rd |only man/Eigen_lsSolve.Rd | 64 ++++++------- man/Eigen_pinverse.Rd |only src/EigenR.cpp | 178 +++++++++++++++++++++++++++++++++--- src/Makevars | 2 src/Makevars.win | 2 src/RcppExports.cpp | 177 ++++++++++++++++++++++++++++++++++++ 20 files changed, 771 insertions(+), 131 deletions(-)
Title: TraMineR Extension
Description: Collection of ancillary functions and utilities to be used in conjunction with the 'TraMineR' package for sequence data exploration. Includes, among others, specific functions such as state survival plots, position-wise group-typical states, dynamic sequence indicators, and dissimilarities between event sequences. Also includes contributions by non-members of the TraMineR team such as the relative frequency plot and methods for polyadic data.
Author: Gilbert Ritschard [aut, cre, ths, cph]
(<https://orcid.org/0000-0001-7776-0903>),
Matthias Studer [aut] (<https://orcid.org/0000-0002-6269-1412>),
Reto Buergin [aut],
Tim Liao [ctb],
Alexis Gabadinho [ctb],
Pierre-Alexandre Fonta [ctb],
Nicolas Muller [ctb],
Patrick Rousset [ctb]
Maintainer: Gilbert Ritschard <gilbert.ritschard@unige.ch>
Diff between TraMineRextras versions 0.6.2 dated 2021-06-24 and 0.6.3 dated 2022-01-19
DESCRIPTION | 12 ++++++------ MD5 | 20 +++++++++++++------- NAMESPACE | 11 ++++++++++- R/seqcta.R |only R/seqsamm.R |only R/seqsha.R |only build/partial.rdb |binary inst/NEWS | 18 +++++++++++++++--- inst/NEWS.Rd | 29 +++++++++++++++++++++++++++-- man/TraMineRextras-package.Rd | 23 ++--------------------- man/seqcta.Rd |only man/seqentrans.Rd | 2 +- man/seqsamm.Rd |only man/seqsha.Rd |only 14 files changed, 74 insertions(+), 41 deletions(-)
More information about TraMineRextras at CRAN
Permanent link
Title: Automated Transformations, Normality Testing, and Reporting
Description: Automated performance of common transformations used to fulfill parametric
assumptions of normality and identification of the best performing method
for the user. Output for various normality tests (Thode, 2002) corresponding
to the best performing method and a descriptive statistical report of the
input data in its original units (5-number summary and mathematical moments)
are also presented. Lastly, the Rankit, an empirical normal quantile transformation
(ENQT) (Soloman & Sawilowsky, 2009), is provided to accommodate non-standard
use cases and facilitate adoption.
<DOI: 10.1201/9780203910894>.
<DOI: 10.22237/jmasm/1257034080>.
Author: Daniel Mattei [aut, cre],
John Ruscio [aut]
Maintainer: Daniel Mattei <DMattei@live.com>
Diff between Rita versions 1.0.0 dated 2021-12-15 and 1.1.0 dated 2022-01-19
DESCRIPTION | 6 +- MD5 | 19 ++++---- NEWS |only R/master_Functions.R | 40 +++++++++++++---- R/normal_Tests.R | 114 ++++++++++++++++++++++++++++++++++++++++----------- R/normalizations.R | 37 +++++++++++++--- man/DPTest.Rd | 4 + man/JBTest.Rd | 8 ++- man/Rita.Rd | 9 ++-- man/SWTest.Rd | 10 ++++ man/logitXform.Rd | 7 ++- 11 files changed, 194 insertions(+), 60 deletions(-)
Title: Probabilistic Latent Feature Analysis
Description: Functions for estimating probabilistic latent feature models with a disjunctive, conjunctive or additive mapping rule on (aggregated) binary three-way data.
Author: Michel Meulders [aut, cre],
Philippe De Bruecker [ctb]
Maintainer: Michel Meulders <michel.meulders@kuleuven.be>
Diff between plfm versions 2.2.2 dated 2018-10-28 and 2.2.3 dated 2022-01-19
DESCRIPTION | 9 +++++---- MD5 | 4 ++-- src/main.cpp | 6 +++--- 3 files changed, 10 insertions(+), 9 deletions(-)
Title: Toolkit for Item Factor Analysis with 'OpenMx'
Description: Tools, tutorials, and demos of Item Factor Analysis using 'OpenMx'.
This software is described in Pritikin & Falk (2020) <doi:10.1177/0146621620929431>.
Author: Joshua N. Pritikin [cre, aut]
Maintainer: Joshua N. Pritikin <jpritikin@pobox.com>
Diff between ifaTools versions 0.22 dated 2020-09-15 and 0.23 dated 2022-01-19
DESCRIPTION | 12 +++++------- MD5 | 10 +++++----- build/vignette.rds |binary inst/doc/pritikin-schmidt.pdf |binary tools/rox | 2 +- vignettes/plotTwoFactors.R | 8 +++++++- 6 files changed, 18 insertions(+), 14 deletions(-)
Title: Data Table Back-End for 'dplyr'
Description: Provides a data.table backend for 'dplyr'. The goal of
'dtplyr' is to allow you to write 'dplyr' code that is automatically
translated to the equivalent, but usually much faster, data.table
code.
Author: Hadley Wickham [cre, aut],
Maximilian Girlich [aut],
Mark Fairbanks [aut],
Ryan Dickerson [aut],
RStudio [cph, fnd]
Maintainer: Hadley Wickham <hadley@rstudio.com>
Diff between dtplyr versions 1.2.0 dated 2021-12-05 and 1.2.1 dated 2022-01-19
DESCRIPTION | 42 ++++++++++++-------------------- MD5 | 12 ++++----- NEWS.md | 4 +++ build/dtplyr.pdf |binary inst/doc/translation.html | 6 ++-- man/dtplyr-package.Rd | 2 - tests/testthat/test-step-subset-slice.R | 10 +++---- 7 files changed, 36 insertions(+), 40 deletions(-)
Title: Cross-Validated Covariance Matrix Estimation
Description: An efficient cross-validated approach for covariance matrix
estimation, particularly useful in high-dimensional settings. This
method relies upon the theory of loss-based estimator selection to
identify the optimal estimator of the covariance matrix from among a
prespecified set of candidates.
Author: Philippe Boileau [aut, cre, cph]
(<https://orcid.org/0000-0002-4850-2507>),
Nima Hejazi [aut] (<https://orcid.org/0000-0002-7127-2789>),
Brian Collica [aut] (<https://orcid.org/0000-0003-1127-2557>),
Jamarcus Liu [ctb],
Mark van der Laan [ctb, ths] (<https://orcid.org/0000-0003-1432-5511>),
Sandrine Dudoit [ctb, ths] (<https://orcid.org/0000-0002-6069-8629>)
Maintainer: Philippe Boileau <philippe_boileau@berkeley.edu>
Diff between cvCovEst versions 1.0.1 dated 2021-10-14 and 1.0.2 dated 2022-01-19
DESCRIPTION | 8 - MD5 | 32 +++---- NAMESPACE | 2 NEWS.md | 5 + R/helpers.R | 9 +- R/plot_functions.R | 13 +-- R/summary_functions.R | 149 +++++++++++++++++++++++++++++++++-- README.md | 4 build/partial.rdb |binary inst/doc/using_cvCovEst.R | 2 inst/doc/using_cvCovEst.Rmd | 27 ++++-- inst/doc/using_cvCovEst.html | 39 ++++----- man/bestInClass.Rd | 6 - man/cvMatrixMetrics.Rd |only man/matrixMetrics.Rd |only man/summary.cvCovEst.Rd | 12 ++ tests/testthat/test-plot-functions.R | 16 +-- vignettes/using_cvCovEst.Rmd | 27 ++++-- 18 files changed, 267 insertions(+), 84 deletions(-)
Title: Covariate Balance Tables and Plots
Description: Generate balance tables and plots for covariates of groups preprocessed through matching, weighting or subclassification, for example, using propensity scores. Includes integration with 'MatchIt', 'twang', 'Matching', 'optmatch', 'CBPS', 'ebal', 'WeightIt', 'cem', 'sbw', and 'designmatch' for assessing balance on the output of their preprocessing functions. Users can also specify data for balance assessment not generated through the above packages. Also included are methods for assessing balance in clustered or multiply imputed data sets or data sets with longitudinal treatments.
Author: Noah Greifer [aut, cre] (<https://orcid.org/0000-0003-3067-7154>)
Maintainer: Noah Greifer <noah.greifer@gmail.com>
Diff between cobalt versions 4.3.1 dated 2021-03-30 and 4.3.2 dated 2022-01-19
DESCRIPTION | 8 MD5 | 64 - NAMESPACE | 3 NEWS.md | 18 R/SHARED.R | 26 R/bal.plot.R | 12 R/bal.sum.R | 77 + R/base.bal.tab.R | 8 R/functions_for_processing.R | 195 +++- R/get.w.R | 21 R/love.plot.R | 156 ++- R/print.bal.tab.R | 22 R/utilities.R | 2 R/x2base.R | 1201 ++++++++++++++--------------- R/zzz.R |only build/partial.rdb |binary build/vignette.rds |binary inst/doc/cobalt.Rmd | 218 +---- inst/doc/cobalt.html | 469 +++++++++-- inst/doc/cobalt_A1_other_packages.Rmd | 6 inst/doc/cobalt_A1_other_packages.html | 280 +++++- inst/doc/cobalt_A2_segmented_data.html | 291 +++++-- inst/doc/cobalt_A3_longitudinal_treat.Rmd | 17 inst/doc/cobalt_A3_longitudinal_treat.html | 249 +++++- inst/doc/cobalt_A4_love.plot.Rmd | 18 inst/doc/cobalt_A4_love.plot.html | 247 +++++ man/bal.plot.Rd | 6 man/bal.tab.weightit.Rd | 1 man/class-bal.tab.multi.Rd | 19 vignettes/cobalt.Rmd | 218 +---- vignettes/cobalt_A1_other_packages.Rmd | 6 vignettes/cobalt_A3_longitudinal_treat.Rmd | 17 vignettes/cobalt_A4_love.plot.Rmd | 18 vignettes/references.bib |only 34 files changed, 2515 insertions(+), 1378 deletions(-)
Title: Black-Box Optimization Toolkit
Description: Provides a common framework for optimization of black-box
functions for other packages, e.g. 'mlr3tuning' or 'mlr3fselect'. It
offers various optimization methods e.g. grid search, random search,
generalized simulated annealing and iterated racing.
Author: Marc Becker [cre, aut] (<https://orcid.org/0000-0002-8115-0400>),
Jakob Richter [aut] (<https://orcid.org/0000-0003-4481-5554>),
Michel Lang [aut] (<https://orcid.org/0000-0001-9754-0393>),
Bernd Bischl [aut] (<https://orcid.org/0000-0001-6002-6980>),
Martin Binder [aut],
Olaf Mersmann [ctb]
Maintainer: Marc Becker <marcbecker@posteo.de>
Diff between bbotk versions 0.4.0 dated 2021-09-13 and 0.5.0 dated 2022-01-19
bbotk-0.4.0/bbotk/man/mult_max_to_min.Rd |only bbotk-0.5.0/bbotk/DESCRIPTION | 19 bbotk-0.5.0/bbotk/MD5 | 148 +- bbotk-0.5.0/bbotk/NAMESPACE | 5 bbotk-0.5.0/bbotk/NEWS.md | 11 bbotk-0.5.0/bbotk/R/Archive.R | 100 - bbotk-0.5.0/bbotk/R/ArchiveBest.R | 36 bbotk-0.5.0/bbotk/R/Codomain.R |only bbotk-0.5.0/bbotk/R/Objective.R | 24 bbotk-0.5.0/bbotk/R/ObjectiveRFun.R | 12 bbotk-0.5.0/bbotk/R/OptimInstance.R | 85 - bbotk-0.5.0/bbotk/R/OptimInstanceSingleCrit.R | 4 bbotk-0.5.0/bbotk/R/Optimizer.R | 56 bbotk-0.5.0/bbotk/R/OptimizerCmaes.R | 70 - bbotk-0.5.0/bbotk/R/OptimizerDesignPoints.R | 19 bbotk-0.5.0/bbotk/R/OptimizerGenSA.R | 48 bbotk-0.5.0/bbotk/R/OptimizerGridSearch.R | 2 bbotk-0.5.0/bbotk/R/OptimizerIrace.R | 78 - bbotk-0.5.0/bbotk/R/OptimizerNLoptr.R | 62 bbotk-0.5.0/bbotk/R/OptimizerRandomSearch.R | 2 bbotk-0.5.0/bbotk/R/Progressor.R | 8 bbotk-0.5.0/bbotk/R/Terminator.R | 2 bbotk-0.5.0/bbotk/R/TerminatorClockTime.R | 4 bbotk-0.5.0/bbotk/R/TerminatorCombo.R | 10 bbotk-0.5.0/bbotk/R/TerminatorEvals.R | 2 bbotk-0.5.0/bbotk/R/TerminatorRunTime.R | 6 bbotk-0.5.0/bbotk/R/assertions.R | 27 bbotk-0.5.0/bbotk/R/bb_optimize.R | 28 bbotk-0.5.0/bbotk/R/bbotk_reflections.R | 2 bbotk-0.5.0/bbotk/R/bibentries.R | 9 bbotk-0.5.0/bbotk/R/helper.R | 54 bbotk-0.5.0/bbotk/R/helper_irace.R | 4 bbotk-0.5.0/bbotk/R/nds_selection.R |only bbotk-0.5.0/bbotk/R/zzz.R | 9 bbotk-0.5.0/bbotk/README.md | 89 - bbotk-0.5.0/bbotk/build/partial.rdb |binary bbotk-0.5.0/bbotk/build/vignette.rds |binary bbotk-0.5.0/bbotk/inst/WORDLIST |only bbotk-0.5.0/bbotk/inst/doc/bbotk.Rmd | 2 bbotk-0.5.0/bbotk/inst/doc/bbotk.html | 636 +++++----- bbotk-0.5.0/bbotk/man/Archive.Rd | 56 bbotk-0.5.0/bbotk/man/ArchiveBest.Rd | 12 bbotk-0.5.0/bbotk/man/Codomain.Rd |only bbotk-0.5.0/bbotk/man/ObjectiveRFun.Rd | 3 bbotk-0.5.0/bbotk/man/OptimInstance.Rd | 6 bbotk-0.5.0/bbotk/man/Optimizer.Rd | 13 bbotk-0.5.0/bbotk/man/bb_optimize.Rd | 6 bbotk-0.5.0/bbotk/man/bbotk-package.Rd | 5 bbotk-0.5.0/bbotk/man/bbotk_assertions.Rd | 5 bbotk-0.5.0/bbotk/man/branin.Rd |only bbotk-0.5.0/bbotk/man/mlr_optimizers_cmaes.Rd | 58 bbotk-0.5.0/bbotk/man/mlr_optimizers_design_points.Rd | 12 bbotk-0.5.0/bbotk/man/mlr_optimizers_gensa.Rd | 46 bbotk-0.5.0/bbotk/man/mlr_optimizers_irace.Rd | 16 bbotk-0.5.0/bbotk/man/mlr_optimizers_nloptr.Rd | 50 bbotk-0.5.0/bbotk/man/nds_selection.Rd |only bbotk-0.5.0/bbotk/man/search_start.Rd | 2 bbotk-0.5.0/bbotk/tests/testthat.R | 2 bbotk-0.5.0/bbotk/tests/testthat/helper.R | 17 bbotk-0.5.0/bbotk/tests/testthat/test_Archive.R | 18 bbotk-0.5.0/bbotk/tests/testthat/test_ArchiveBest.R | 6 bbotk-0.5.0/bbotk/tests/testthat/test_Objective.R | 68 - bbotk-0.5.0/bbotk/tests/testthat/test_OptimInstanceMultiCrit.R | 9 bbotk-0.5.0/bbotk/tests/testthat/test_OptimInstanceSingleCrit.R | 28 bbotk-0.5.0/bbotk/tests/testthat/test_Optimizer.R | 4 bbotk-0.5.0/bbotk/tests/testthat/test_OptimizerCmaes.R | 2 bbotk-0.5.0/bbotk/tests/testthat/test_OptimizerIrace.R | 40 bbotk-0.5.0/bbotk/tests/testthat/test_Progressor.R | 2 bbotk-0.5.0/bbotk/tests/testthat/test_TerminatorClockTime.R | 4 bbotk-0.5.0/bbotk/tests/testthat/test_TerminatorCombo.R | 9 bbotk-0.5.0/bbotk/tests/testthat/test_TerminatorEvals.R | 34 bbotk-0.5.0/bbotk/tests/testthat/test_TerminatorNone.R | 6 bbotk-0.5.0/bbotk/tests/testthat/test_TerminatorPerfReached.R | 4 bbotk-0.5.0/bbotk/tests/testthat/test_TerminatorRunTime.R | 8 bbotk-0.5.0/bbotk/tests/testthat/test_TerminatorStagnation.R | 6 bbotk-0.5.0/bbotk/tests/testthat/test_TerminatorStagnationBatch.R | 6 bbotk-0.5.0/bbotk/tests/testthat/test_bb_optimize.R | 22 bbotk-0.5.0/bbotk/tests/testthat/test_nds_selection.R |only bbotk-0.5.0/bbotk/vignettes/bbotk.Rmd | 2 79 files changed, 1208 insertions(+), 1052 deletions(-)
Title: Search Spaces for Hyperparameter Tuning
Description: Collection of search spaces for hyperparameter tuning.
Includes various search spaces that can be directly applied on an
`mlr3` learner. Additionally, meta information about the search space
can be queried.
Author: Marc Becker [cre, aut] (<https://orcid.org/0000-0002-8115-0400>),
Michel Lang [ctb] (<https://orcid.org/0000-0001-9754-0393>)
Maintainer: Marc Becker <marcbecker@posteo.de>
Diff between mlr3tuningspaces versions 0.1.0 dated 2022-01-03 and 0.1.1 dated 2022-01-19
DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ NEWS.md | 4 ++++ R/TuningSpace.R | 8 +++++++- R/tuning_spaces_default.R | 11 +++++------ man/TuningSpace.Rd | 11 ++++++++++- man/tuning_spaces_default.Rd | 5 ++--- 7 files changed, 37 insertions(+), 20 deletions(-)
More information about mlr3tuningspaces at CRAN
Permanent link
Title: A Comprehensive R Interface for the DSSAT Cropping Systems Model
Description: The purpose of this package is to provide a comprehensive
R interface to the Decision Support System for Agrotechnology
Transfer Cropping Systems Model (DSSAT-CSM; see <https://dssat.net> for more information).
The package provides cross-platform functions to read and
write input files, run DSSAT-CSM, and read output files.
Author: Phillip D. Alderman [aut, cre]
Maintainer: Phillip D. Alderman <phillip.alderman@okstate.edu>
Diff between DSSAT versions 0.0.5 dated 2021-12-21 and 0.0.6 dated 2022-01-19
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- NEWS.md | 4 ++++ R/construct_variable_format.R | 2 +- 4 files changed, 12 insertions(+), 8 deletions(-)
Title: Accelerated Bayesian Analytics with DAGs
Description: Accelerate Bayesian analytics workflows in 'R' through interactive modelling,
visualization, and inference. Define probabilistic graphical models using directed
acyclic graphs (DAGs) as a unifying language for business stakeholders, statisticians,
and programmers. This package relies on the sleek and elegant 'greta' package for
Bayesian inference. 'greta', in turn, is an interface into 'TensorFlow' from 'R'.
Install 'greta' using instructions available here: <https://www.causact.com/install-tensorflow-greta-and-causact.html>.
See <https://github.com/flyaflya/causact> or <https://www.causact.com/> for more documentation.
Author: Adam Fleischhacker [aut, cre, cph],
Daniela Dapena [ctb],
Rose Nguyen [ctb],
Jared Sharpe [ctb]
Maintainer: Adam Fleischhacker <ajf@udel.edu>
Diff between causact versions 0.4.0 dated 2021-01-25 and 0.4.1 dated 2022-01-19
DESCRIPTION | 10 +++--- MD5 | 24 +++++++-------- NAMESPACE | 1 NEWS.md | 58 ++++++++++++++++++++------------------ R/dag_diagrammer.R | 6 +-- R/dag_merge.R | 2 - R/dagp_plot.R | 7 +--- R/meaningfulLabels.R | 2 - R/replace_in_spec2.R | 6 +-- R/utils.R | 11 +++++-- README.md | 33 +++++++++------------ man/figures/chimpsGraphPost-1.png |binary man/figures/gretaPost-1.png |binary 13 files changed, 82 insertions(+), 78 deletions(-)
Title: Trajectory Miner: a Toolbox for Exploring and Rendering
Sequences
Description: Toolbox for the manipulation, description and rendering of sequences, and more generally the mining of sequence data in the field of social sciences. Although the toolbox is primarily intended for analyzing state or event sequences that describe life courses such as family formation histories or professional careers, its features also apply to many other kinds of categorical sequence data. It accepts many different sequence representations as input and provides tools for converting sequences from one format to another. It offers several functions for describing and rendering sequences, for computing distances between sequences with different metrics (among which optimal matching), original dissimilarity-based analysis tools, and simple functions for extracting the most frequent subsequences and identifying the most discriminating ones among them. A user's guide can be found on the TraMineR web page.
Author: Alexis Gabadinho [aut, cph],
Matthias Studer [aut, cph] (<https://orcid.org/0000-0002-6269-1412>),
Nicolas Müller [aut],
Reto Bürgin [aut],
Pierre-Alexandre Fonta [aut],
Gilbert Ritschard [aut, cre, cph]
(<https://orcid.org/0000-0001-7776-0903>)
Maintainer: Gilbert Ritschard <gilbert.ritschard@unige.ch>
Diff between TraMineR versions 2.2-2 dated 2021-06-03 and 2.2-3 dated 2022-01-19
DESCRIPTION | 12 - MD5 | 91 +++++----- NAMESPACE | 11 - NEWS | 63 +++++++ R/TraMineR-errbar.R |only R/dissdomassoc.R | 54 ++++++ R/plot.stslist.meant.R | 12 + R/plot.stslist.modst.R | 5 R/seqcost.R | 3 R/seqdiff.R | 10 - R/seqdistmc.R | 292 +++++++++++++++++++++++------------ R/seqecmpgroup.R | 50 +++-- R/seqecreate.R | 1 R/seqformat-SPELL_to_STS.R | 86 ++++++++-- R/seqplot.R | 18 +- R/seqprep.R | 10 - build/partial.rdb |binary build/vignette.rds |binary data/ex1.rda |binary data/ex2.rda |binary data/famform.rda |binary inst/CITATION | 15 - inst/NEWS.Rd | 72 ++++++++ inst/doc/TraMineR-state-sequence.pdf |binary man/TraMineR-package.Rd | 2 man/dissassoc.Rd | 11 - man/dissdomassoc.Rd | 8 man/plot.stslist.meant.Rd | 6 man/plot.stslist.modst.Rd | 5 man/plot.subseqelistchisq.Rd | 5 man/seqST.Rd | 4 man/seqcost.Rd | 8 man/seqdiff.Rd | 29 +-- man/seqdistmc.Rd | 62 ++++--- man/seqecreate.Rd | 12 - man/seqformat.Rd | 2 man/seqibad.Rd | 2 man/seqici.Rd | 4 man/seqindic.Rd | 14 - man/seqintegr.Rd | 2 man/seqipos.Rd | 2 man/seqivardur.Rd | 2 man/seqivolatility.Rd | 2 man/seqplot.Rd | 16 + man/seqprecarity.Rd | 13 - man/seqtransn.Rd | 9 - man/str.eseq.Rd | 15 - 47 files changed, 726 insertions(+), 314 deletions(-)
Title: Download Data from Bank of Spain
Description: Tools to download data series from 'Banco de España' ('BdE')
on 'tibble' format. 'Banco de España' is the national central bank
and, within the framework of the Single Supervisory Mechanism ('SSM'),
the supervisor of the Spanish banking system along with the European
Central Bank. This package is in no way sponsored endorsed or
administered by 'Banco de España'.
Author: Diego H. Herrero [aut, cre, cph]
(<https://orcid.org/0000-0001-8457-4658>, rOpenSpain)
Maintainer: Diego H. Herrero <dev.dieghernan@gmail.com>
Diff between tidyBdE versions 0.2.2 dated 2021-10-29 and 0.2.3 dated 2022-01-19
tidyBdE-0.2.2/tidyBdE/man/figures/README-gdp-1.png |only tidyBdE-0.2.2/tidyBdE/vignettes/gdp-1.png |only tidyBdE-0.2.3/tidyBdE/DESCRIPTION | 6 - tidyBdE-0.2.3/tidyBdE/MD5 | 32 ++--- tidyBdE-0.2.3/tidyBdE/NEWS.md | 8 + tidyBdE-0.2.3/tidyBdE/R/catalogs.R | 27 +--- tidyBdE-0.2.3/tidyBdE/README.md | 91 ++-------------- tidyBdE-0.2.3/tidyBdE/build/vignette.rds |binary tidyBdE-0.2.3/tidyBdE/inst/CITATION | 18 +-- tidyBdE-0.2.3/tidyBdE/inst/WORDLIST | 10 + tidyBdE-0.2.3/tidyBdE/inst/doc/tidyBdE.Rmd | 75 ------------- tidyBdE-0.2.3/tidyBdE/inst/doc/tidyBdE.html | 81 +------------- tidyBdE-0.2.3/tidyBdE/man/bde_catalog_load.Rd | 7 - tidyBdE-0.2.3/tidyBdE/man/bde_catalog_update.Rd | 14 +- tidyBdE-0.2.3/tidyBdE/man/figures/README-palettes-1.png |binary tidyBdE-0.2.3/tidyBdE/man/figures/README-palettes-2.png |binary tidyBdE-0.2.3/tidyBdE/tests/testthat/test-catalogs.R | 10 - tidyBdE-0.2.3/tidyBdE/vignettes/tidyBdE.Rmd | 75 ------------- 18 files changed, 81 insertions(+), 373 deletions(-)
Title: Core Utilities for Developing and Running Spatially Explicit
Discrete Event Models
Description: Provides the core framework for a discrete event system (DES) to
implement a complete data-to-decisions, reproducible workflow.
The core DES components facilitate modularity, and easily enable the user
to include additional functionality by running user-built modules.
Includes conditional scheduling, restart after interruption, packaging of
reusable modules, tools for developing arbitrary automated workflows,
automated interweaving of modules of different temporal resolution,
and tools for visualizing and understanding the DES project.
Author: Alex M Chubaty [aut, cre] (<https://orcid.org/0000-0001-7146-8135>),
Eliot J B McIntire [aut] (<https://orcid.org/0000-0002-6914-8316>),
Yong Luo [ctb],
Steve Cumming [ctb],
Ceres Barros [ctb] (<https://orcid.org/0000-0003-4036-977X>),
Her Majesty the Queen in Right of Canada, as represented by the
Minister of Natural Resources Canada [cph]
Maintainer: Alex M Chubaty <alex.chubaty@gmail.com>
Diff between SpaDES.core versions 1.0.9 dated 2021-09-30 and 1.0.10 dated 2022-01-19
DESCRIPTION | 18 +- MD5 | 73 +++++------ NAMESPACE | 2 NEWS.md | 26 ++++ R/Plots.R | 24 ++- R/cache.R | 2 R/convertToPackage.R |only R/helpers.R | 1 R/misc-methods.R | 89 +++++++++++++ R/modActiveBinding.R | 21 ++- R/module-template.R | 17 ++ R/moduleMetadata.R | 13 +- R/options.R | 7 + R/saveLoadSimList.R | 44 ++++++ R/simList-accessors.R | 36 +++-- R/simulation-parseModule.R | 154 +++++++++++++++-------- R/simulation-simInit.R | 13 +- R/simulation-spades.R | 28 +++- README.md | 5 build/vignette.rds |binary inst/doc/i-introduction.html | 58 ++++----- inst/doc/ii-modules.Rmd | 2 inst/doc/ii-modules.html | 110 ++++++++--------- inst/doc/iii-cache.html | 238 ++++++++++++++++++------------------- inst/doc/iv-advanced.html | 8 - inst/doc/v-automated-testing.html | 14 +- inst/templates/module.R.template | 2 inst/templates/module.Rmd.template | 6 man/Plots.Rd | 3 man/convertToPackage.Rd |only man/moduleMetadata.Rd | 13 +- man/paramCheckOtherMods.Rd |only man/spadesOptions.Rd | 6 tests/testthat/test-futureEvents.R | 8 - tests/testthat/test-mod.R | 142 ++++++++++++++++++++-- tests/testthat/test-save.R | 2 tests/testthat/test-simList.R | 2 tests/testthat/test-timeunits.R | 46 +++---- vignettes/ii-modules.Rmd | 2 39 files changed, 833 insertions(+), 402 deletions(-)
Title: 'ThingsBoard' API
Description: The goal of 'Rthingsboard' is to provide interaction with the API of 'ThingsBoard' (<https://thingsboard.io/>), an open-source IoT platform for device management, data collection, processing and visualization.
Author: David Dorchies [aut, cre] (<https://orcid.org/0000-0002-6595-7984>)
Maintainer: David Dorchies <david.dorchies@inrae.fr>
Diff between Rthingsboard versions 0.2.4 dated 2021-01-21 and 0.2.7 dated 2022-01-19
DESCRIPTION | 16 +++---- MD5 | 19 ++++---- NEWS.md |only R/thingsboard_api.R | 76 ++++++++++++++++++---------------- README.md | 32 +------------- man/ThingsboardApi-class.Rd | 9 ++++ man/ThingsboardApi_checkToken.Rd | 3 - man/ThingsboardApi_getTelemetry.Rd | 16 +++++-- man/ThingsboardApi_getToken.Rd | 3 - man/ThingsboardApi_getValues.Rd | 25 ----------- tests/testthat/test-thingsboard_api.R | 13 +++-- 11 files changed, 98 insertions(+), 114 deletions(-)
Title: False Discovery Exceedance Controlling Multiple Testing
Procedures
Description: Multiple testing procedures for heterogeneous and discrete tests as described in Döhler and Roquain (2019) <arXiv:1912.04607v1>. The main algorithms of the paper are available as continuous, discrete and weighted versions.
Author: Sebastian Döhler [aut],
Florian Junge [aut, cre],
Etienne Roquain [ctb]
Maintainer: Florian Junge <florian.junge@h-da.de>
Diff between FDX versions 1.0.3 dated 2020-11-25 and 1.0.4 dated 2022-01-19
DESCRIPTION | 14 +- MD5 | 14 +- NEWS.md | 35 +++-- R/RcppExports.R | 262 ++++++++++++++++++++-------------------- R/discreteGR_fun.R | 334 ++++++++++++++++++++++++++-------------------------- man/kernel.Rd | 2 src/RcppExports.cpp | 7 - src/kernel_fun.cpp | 13 +- 8 files changed, 348 insertions(+), 333 deletions(-)
More information about data.validator at CRAN
Permanent link
Title: Tools for Analysing and Visualising Workplace Analytics Data
Description: Opinionated functions that enable easier and faster
analysis of Workplace Analytics data. There are three main types of functions in 'wpa':
(i) Standard functions create a 'ggplot' visual or a summary table based on a specific
Workplace Analytics metric; (2) Report Generation functions generate HTML reports on
a specific analysis area, e.g. Collaboration; (3) Other miscellaneous functions cover
more specific applications (e.g. Subject Line text mining) of Workplace Analytics data.
This package adheres to 'tidyverse' principles and works well with the pipe syntax.
'wpa' is built with the beginner-to-intermediate R users in mind, and is optimised for
simplicity.
Author: Martin Chan [aut, cre],
Carlos Morales [aut],
Mark Powers [ctb],
Ainize Cidoncha [ctb],
Rosamary Ochoa Vargas [ctb],
Tannaz Sattari [ctb],
Lucas Hogner [ctb],
Jasminder Thind [ctb],
Simone Liebal [ctb],
Aleksey Ashikhmin [ctb],
Ellen Trinklein [ctb],
Microsoft Corporation [cph]
Maintainer: Martin Chan <martin.chan@microsoft.com>
Diff between wpa versions 1.6.3 dated 2021-11-21 and 1.6.4 dated 2022-01-19
DESCRIPTION | 6 +- MD5 | 50 +++++++++++------------ NEWS.md | 8 +++ R/collaboration_area.R | 14 +----- R/collaboration_dist.R | 3 + R/collaboration_fizz.R | 3 + R/collaboration_line.R | 3 + R/collaboration_rank.R | 4 + R/collaboration_trend.R | 3 + R/globals.R | 2 R/meeting_skim.R | 91 +++++++++++++++++++++++++++---------------- R/meeting_tm_report.R | 4 - R/standardise_pq.R | 35 ++++++++++++++++ R/subject_scan.R | 4 - R/tm_clean.R | 12 ++++- R/tm_cooc.R | 6 +- R/tm_freq.R | 4 - R/tm_wordcloud.R | 14 +++++- R/validation_report.R | 6 ++ R/workpatterns_classify_bw.R | 1 man/meeting_tm_report.Rd | 4 - man/subject_scan.Rd | 4 - man/tm_clean.Rd | 4 - man/tm_cooc.Rd | 4 - man/tm_freq.Rd | 4 - man/tm_wordcloud.Rd | 7 ++- 26 files changed, 203 insertions(+), 97 deletions(-)
Title: A Tool Kit for Working with Time Series in R
Description: Easy visualization, wrangling, and feature engineering of time series data for
forecasting and machine learning prediction. Consolidates and extends time series functionality
from packages including 'dplyr', 'stats', 'xts', 'forecast', 'slider', 'padr', 'recipes', and 'rsample'.
Author: Matt Dancho [aut, cre],
Davis Vaughan [aut]
Maintainer: Matt Dancho <mdancho@business-science.io>
Diff between timetk versions 2.6.2 dated 2021-11-16 and 2.7.0 dated 2022-01-19
timetk-2.6.2/timetk/R/timetk-internal.R |only timetk-2.6.2/timetk/man/timetk_internal.Rd |only timetk-2.7.0/timetk/DESCRIPTION | 12 - timetk-2.7.0/timetk/MD5 | 89 +++++----- timetk-2.7.0/timetk/NAMESPACE | 9 + timetk-2.7.0/timetk/NEWS.md | 23 ++ timetk-2.7.0/timetk/R/00_global_vars.R | 3 timetk-2.7.0/timetk/R/augment-tk_augment_differences.R | 4 timetk-2.7.0/timetk/R/augment-tk_augment_fourier.R | 11 - timetk-2.7.0/timetk/R/augment-tk_augment_lags.R | 4 timetk-2.7.0/timetk/R/coersion-tk_ts.R | 13 + timetk-2.7.0/timetk/R/coersion-tk_zooreg.R | 13 + timetk-2.7.0/timetk/R/diagnostics-tk_acf_diagnostics.R | 2 timetk-2.7.0/timetk/R/diagnostics-tk_anomaly_diagnostics.R | 3 timetk-2.7.0/timetk/R/diagnostiscs-tsfeatures.R |only timetk-2.7.0/timetk/R/dplyr-pad_by_time.R | 47 +++-- timetk-2.7.0/timetk/R/get-tk_get_frequency.R | 4 timetk-2.7.0/timetk/R/get-tk_get_timeseries.R | 6 timetk-2.7.0/timetk/R/make-tk_make_timeseries.R | 4 timetk-2.7.0/timetk/R/plot-time_series.R | 13 + timetk-2.7.0/timetk/R/plot-time_series_boxplot.R |only timetk-2.7.0/timetk/R/rsample-time_series_cv.R | 27 ++- timetk-2.7.0/timetk/R/rsample-time_series_split.R | 18 +- timetk-2.7.0/timetk/R/timetk-package.R | 15 - timetk-2.7.0/timetk/README.md | 10 - timetk-2.7.0/timetk/build/vignette.rds |binary timetk-2.7.0/timetk/inst/doc/TK04_Plotting_Time_Series.R | 20 ++ timetk-2.7.0/timetk/inst/doc/TK04_Plotting_Time_Series.Rmd | 56 +++++- timetk-2.7.0/timetk/inst/doc/TK04_Plotting_Time_Series.html | 70 +++++-- timetk-2.7.0/timetk/inst/doc/TK07_Time_Series_Data_Wrangling.Rmd | 7 timetk-2.7.0/timetk/inst/doc/TK07_Time_Series_Data_Wrangling.html | 16 + timetk-2.7.0/timetk/man/pad_by_time.Rd | 13 + timetk-2.7.0/timetk/man/plot_time_series_boxplot.Rd |only timetk-2.7.0/timetk/man/time_series_cv.Rd | 13 + timetk-2.7.0/timetk/man/time_series_split.Rd | 4 timetk-2.7.0/timetk/man/timetk.Rd | 13 - timetk-2.7.0/timetk/man/tk_anomaly_diagnostics.Rd | 12 - timetk-2.7.0/timetk/man/tk_ts_dispatch_.Rd |only timetk-2.7.0/timetk/man/tk_tsfeatures.Rd |only timetk-2.7.0/timetk/man/tk_zooreg_dispatch_.Rd |only timetk-2.7.0/timetk/vignettes/TK04_Plotting_Time_Series.Rmd | 56 +++++- timetk-2.7.0/timetk/vignettes/TK07_Time_Series_Data_Wrangling.Rmd | 7 timetk-2.7.0/timetk/vignettes/temp_archive/TK00_Time_Series_Coercion.Rmd | 8 timetk-2.7.0/timetk/vignettes/temp_archive/TK01_Working_With_Time_Series_Index.Rmd | 12 - timetk-2.7.0/timetk/vignettes/temp_archive/TK02_Time_Series_Date_Sequences.Rmd | 4 timetk-2.7.0/timetk/vignettes/temp_archive/TK03_Forecasting_Using_Time_Series_Signature.Rmd | 8 timetk-2.7.0/timetk/vignettes/temp_archive/TK05_Plotting_Seasonality_and_Correlation.Rmd | 14 - timetk-2.7.0/timetk/vignettes/temp_archive/TK06_Automatic_Frequency_And_Trend_Selection.Rmd | 8 timetk-2.7.0/timetk/vignettes/temp_archive/TK08_Automatic_Anomaly_Detection.Rmd | 5 timetk-2.7.0/timetk/vignettes/temp_archive/TK09_Clustering.Rmd |only 50 files changed, 472 insertions(+), 204 deletions(-)
Title: Region Quadtrees for Spatial Data
Description: Provides functionality for working with raster-like quadtrees
(also called “region quadtrees”), which allow for variable-sized
cells. The package allows for flexibility in the quadtree creation
process. Several functions defining how to split and aggregate cells
are provided, and custom functions can be written for both of these
processes. In addition, quadtrees can be created using other quadtrees
as “templates”, so that the new quadtree's structure is identical to
the template quadtree. The package also includes functionality for
modifying quadtrees, querying values, saving quadtrees to a file, and
calculating least-cost paths using the quadtree as a resistance
surface.
Author: Derek Friend [aut, cre, cph] (<https://orcid.org/0000-0002-6909-8769>),
Randolph Voorhies [cph] (Author of included 'cereal' library),
Shane Grant [cph] (Author of included 'cereal' library),
Juan Pedro Bolivar Puente [cph] (Author of included 'cereal' library)
Maintainer: Derek Friend <dafriend.R@gmail.com>
Diff between quadtree versions 0.1.2 dated 2021-09-20 and 0.1.8 dated 2022-01-19
DESCRIPTION | 8 MD5 | 142 +++++++------ NAMESPACE | 3 NEWS.md | 70 ++++++ R/generics.R | 8 R/lcp.R | 168 ++++++++++++---- R/plot_Quadtree.R | 24 +- R/projection.R | 4 R/quadtree-package.R | 6 R/quadtree.R | 15 - R/read_write.R | 31 +++ README.md | 74 +++---- build/vignette.rds |binary inst/doc/quadtree-code.html | 2 inst/doc/quadtree-creation.R | 10 inst/doc/quadtree-creation.Rmd | 12 - inst/doc/quadtree-creation.html | 23 +- inst/doc/quadtree-lcp.R | 28 ++ inst/doc/quadtree-lcp.Rmd | 50 ++++ inst/doc/quadtree-lcp.html | 126 ++++++------ inst/doc/quadtree-usage.R | 8 inst/doc/quadtree-usage.Rmd | 10 inst/doc/quadtree-usage.html | 76 +++---- man/add_legend.Rd | 24 +- man/find_lcp.Rd | 86 ++++++-- man/lcp_finder.Rd | 43 +++- man/plot.Rd | 4 man/projection.Rd | 4 man/quadtree-package.Rd | 4 man/quadtree.Rd | 13 - man/write_quadtree_ptr.Rd |only src/LcpFinder.cpp | 317 +++++++++++++++++++++++++------ src/LcpFinder.h | 71 ++++-- src/LcpFinderWrapper.cpp | 83 +++++--- src/LcpFinderWrapper.h | 7 src/Matrix.cpp | 27 ++ src/Matrix.h | 2 src/NodeWrapper.cpp | 4 src/NodeWrapper.h | 2 src/Quadtree.cpp | 6 src/Quadtree.h | 3 src/QuadtreeWrapper.cpp | 17 + src/QuadtreeWrapper.h | 4 src/load_modules.cpp | 4 tests/testthat/lcps/qt_find_lcp_data.csv | 206 ++++++++++---------- tests/testthat/qtrees/qt001.qtree |binary tests/testthat/qtrees/qt002.qtree |binary tests/testthat/qtrees/qt003.qtree |binary tests/testthat/qtrees/qt004.qtree |binary tests/testthat/qtrees/qt005.qtree |binary tests/testthat/qtrees/qt006.qtree |binary tests/testthat/qtrees/qt007.qtree |binary tests/testthat/qtrees/qt008.qtree |binary tests/testthat/qtrees/qt009.qtree |binary tests/testthat/qtrees/qt010.qtree |binary tests/testthat/qtrees/qt011.qtree |binary tests/testthat/qtrees/qt012.qtree |binary tests/testthat/qtrees/qt013.qtree |binary tests/testthat/qtrees/qt014.qtree |binary tests/testthat/qtrees/qt015.qtree |binary tests/testthat/qtrees/qt016.qtree |binary tests/testthat/qtrees/qt017.qtree |binary tests/testthat/qtrees/qt018.qtree |binary tests/testthat/qtrees/qt019.qtree |binary tests/testthat/qtrees/qt020.qtree |binary tests/testthat/qtrees/qt021.qtree |only tests/testthat/test_lcp.R | 72 ++++++- tests/testthat/test_minor_functions.R | 26 +- tests/testthat/test_plot.R | 2 tests/testthat/test_quadtree.R | 32 +-- vignettes/quadtree-creation.Rmd | 12 - vignettes/quadtree-lcp.Rmd | 50 ++++ vignettes/quadtree-usage.Rmd | 10 73 files changed, 1422 insertions(+), 611 deletions(-)
Title: Machine Learning in R - Next Generation
Description: Efficient, object-oriented programming on the
building blocks of machine learning. Provides 'R6' objects for tasks,
learners, resamplings, and measures. The package is geared towards
scalability and larger datasets by supporting parallelization and
out-of-memory data-backends like databases. While 'mlr3' focuses on
the core computational operations, add-on packages provide additional
functionality.
Author: Michel Lang [cre, aut] (<https://orcid.org/0000-0001-9754-0393>),
Bernd Bischl [aut] (<https://orcid.org/0000-0001-6002-6980>),
Jakob Richter [aut] (<https://orcid.org/0000-0003-4481-5554>),
Patrick Schratz [aut] (<https://orcid.org/0000-0003-0748-6624>),
Giuseppe Casalicchio [ctb] (<https://orcid.org/0000-0001-5324-5966>),
Stefan Coors [ctb] (<https://orcid.org/0000-0002-7465-2146>),
Quay Au [ctb] (<https://orcid.org/0000-0002-5252-8902>),
Martin Binder [aut],
Marc Becker [ctb] (<https://orcid.org/0000-0002-8115-0400>)
Maintainer: Michel Lang <michellang@gmail.com>
Diff between mlr3 versions 0.13.0 dated 2021-11-16 and 0.13.1 dated 2022-01-19
mlr3-0.13.0/mlr3/man/figures/logo.svg |only mlr3-0.13.1/mlr3/DESCRIPTION | 16 - mlr3-0.13.1/mlr3/MD5 | 205 ++++++------ mlr3-0.13.1/mlr3/NAMESPACE | 1 mlr3-0.13.1/mlr3/NEWS.md | 12 mlr3-0.13.1/mlr3/R/BenchmarkResult.R | 4 mlr3-0.13.1/mlr3/R/DataBackend.R | 1 mlr3-0.13.1/mlr3/R/DataBackendMatrix.R | 1 mlr3-0.13.1/mlr3/R/HotstartStack.R | 2 mlr3-0.13.1/mlr3/R/LearnerClassifFeatureless.R | 2 mlr3-0.13.1/mlr3/R/LearnerRegrFeatureless.R | 2 mlr3-0.13.1/mlr3/R/ResultData.R | 24 - mlr3-0.13.1/mlr3/R/Task.R | 63 +-- mlr3-0.13.1/mlr3/R/TaskClassif.R | 1 mlr3-0.13.1/mlr3/R/TaskRegr.R | 1 mlr3-0.13.1/mlr3/R/as_data_backend.R | 1 mlr3-0.13.1/mlr3/R/as_task_classif.R | 5 mlr3-0.13.1/mlr3/R/as_task_regr.R | 5 mlr3-0.13.1/mlr3/R/benchmark.R | 26 + mlr3-0.13.1/mlr3/R/benchmark_grid.R | 4 mlr3-0.13.1/mlr3/R/fix_factor_levels.R | 4 mlr3-0.13.1/mlr3/R/helper.R | 106 ------ mlr3-0.13.1/mlr3/R/helper_data_table.R |only mlr3-0.13.1/mlr3/R/helper_exec.R |only mlr3-0.13.1/mlr3/R/helper_hashes.R |only mlr3-0.13.1/mlr3/R/helper_print.R |only mlr3-0.13.1/mlr3/R/mlr_reflections.R | 3 mlr3-0.13.1/mlr3/R/resample.R | 28 + mlr3-0.13.1/mlr3/R/worker.R | 24 + mlr3-0.13.1/mlr3/R/zzz.R | 5 mlr3-0.13.1/mlr3/build/partial.rdb |binary mlr3-0.13.1/mlr3/inst/testthat/helper_autotest.R | 29 + mlr3-0.13.1/mlr3/inst/testthat/helper_debugging.R | 6 mlr3-0.13.1/mlr3/inst/testthat/helper_expectations.R | 41 +- mlr3-0.13.1/mlr3/man/BenchmarkResult.Rd | 4 mlr3-0.13.1/mlr3/man/DataBackend.Rd | 3 mlr3-0.13.1/mlr3/man/Learner.Rd | 2 mlr3-0.13.1/mlr3/man/Measure.Rd | 2 mlr3-0.13.1/mlr3/man/ResultData.Rd | 237 +-------------- mlr3-0.13.1/mlr3/man/TaskClassif.Rd | 1 mlr3-0.13.1/mlr3/man/TaskRegr.Rd | 1 mlr3-0.13.1/mlr3/man/benchmark.Rd | 22 + mlr3-0.13.1/mlr3/man/mlr3-package.Rd | 2 mlr3-0.13.1/mlr3/man/mlr_learners_classif.featureless.Rd | 2 mlr3-0.13.1/mlr3/man/mlr_learners_regr.featureless.Rd | 2 mlr3-0.13.1/mlr3/man/mlr_measures_classif.acc.Rd | 7 mlr3-0.13.1/mlr3/man/mlr_measures_classif.auc.Rd | 8 mlr3-0.13.1/mlr3/man/mlr_measures_classif.bacc.Rd | 7 mlr3-0.13.1/mlr3/man/mlr_measures_classif.bbrier.Rd | 7 mlr3-0.13.1/mlr3/man/mlr_measures_classif.ce.Rd | 7 mlr3-0.13.1/mlr3/man/mlr_measures_classif.dor.Rd | 10 mlr3-0.13.1/mlr3/man/mlr_measures_classif.fbeta.Rd | 17 - 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mlr3-0.13.1/mlr3/tests/testthat/test_encapsulate.R | 4 mlr3-0.13.1/mlr3/tests/testthat/test_hotstart.R | 6 mlr3-0.13.1/mlr3/tests/testthat/test_resample.R | 31 + mlr3-0.13.1/mlr3/tests/testthat/test_resultdata.R | 8 106 files changed, 731 insertions(+), 693 deletions(-)
Title: Historical and Ahistorical Population Projection Matrix Analysis
Description: Complete analytical environment for the construction and analysis
of matrix population models and integral projection models.
Includes the ability to construct historical matrices, which are
2d matrices comprising 3 consecutive times of demographic
information. Estimates both raw and function-based forms of
historical and standard ahistorical matrices. It also estimates
function-based age-by-stage matrices and raw and function-based
Leslie matrices.
Author: Richard P. Shefferson [aut, cre]
(<https://orcid.org/0000-0002-5234-3131>),
Johan Ehrlen [aut] (<https://orcid.org/0000-0001-8539-8967>)
Maintainer: Richard P. Shefferson <cdorm@g.ecc.u-tokyo.ac.jp>
Diff between lefko3 versions 4.1.1 dated 2021-12-07 and 4.2.0 dated 2022-01-19
lefko3-4.1.1/lefko3/vignettes/Ch2.21-1.png |only lefko3-4.1.1/lefko3/vignettes/Ch2.30-1.png |only lefko3-4.1.1/lefko3/vignettes/Ch2.41-1.png |only lefko3-4.1.1/lefko3/vignettes/Ch5.17-1.png |only lefko3-4.1.1/lefko3/vignettes/Ch5.22-1.png |only lefko3-4.1.1/lefko3/vignettes/Ch5.27-1.png |only lefko3-4.1.1/lefko3/vignettes/Ch5.28-1.png |only lefko3-4.1.1/lefko3/vignettes/Ch6.19-1.png |only lefko3-4.1.1/lefko3/vignettes/Ch6.23-1.png |only lefko3-4.1.1/lefko3/vignettes/Ch9.12-1.png |only lefko3-4.1.1/lefko3/vignettes/Ch9.7-1.png |only lefko3-4.2.0/lefko3/DESCRIPTION | 25 lefko3-4.2.0/lefko3/MD5 | 212 - lefko3-4.2.0/lefko3/NAMESPACE | 12 lefko3-4.2.0/lefko3/NEWS | 91 lefko3-4.2.0/lefko3/R/RcppExports.R | 769 +++- lefko3-4.2.0/lefko3/R/data.R | 8 lefko3-4.2.0/lefko3/R/datamanag.R | 57 lefko3-4.2.0/lefko3/R/errorchecks.R | 9 lefko3-4.2.0/lefko3/R/lefko3-package.R | 26 lefko3-4.2.0/lefko3/R/matrixcreation.R | 1828 +++++++++- lefko3-4.2.0/lefko3/R/modelselection.R | 1766 ++++++--- lefko3-4.2.0/lefko3/R/popchar.R | 236 + lefko3-4.2.0/lefko3/R/popdyn.R | 244 + lefko3-4.2.0/lefko3/data/cypdata.rda |binary lefko3-4.2.0/lefko3/data/cypvert.rda |binary lefko3-4.2.0/lefko3/inst/doc/Chapter1.Rmd | 252 - 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Title: Read and Write 'jamovi' Files ('.omv')
Description: The free and open a statistical spreadsheet 'jamovi' (www.jamovi.org)
aims to make statistical analyses easy and intuitive. 'jamovi' produces
syntax that can directly be used in R (in connection with the R-package 'jmv').
Having import / export routines for the data files 'jamovi' produces ('.omv')
permits an easy transfer of analyses between 'jamovi' and R.
Author: Sebastian Jentschke [aut, cre]
(<https://orcid.org/0000-0003-2576-5432>)
Maintainer: Sebastian Jentschke <sebastian.jentschke@uib.no>
Diff between jmvReadWrite versions 0.2.2 dated 2021-09-20 and 0.2.3 dated 2022-01-19
DESCRIPTION | 8 MD5 | 30 +- NEWS.md | 9 R/globals.R | 59 +++++ R/read_omv.R | 157 +++++++-------- R/write_omv.R | 449 +++++++++++++++++++++++-------------------- README.md | 65 ++++-- build/vignette.rds |binary inst/WORDLIST | 26 +- inst/doc/jmvReadWrite.R | 33 ++- inst/doc/jmvReadWrite.Rmd | 55 ++++- inst/doc/jmvReadWrite.html | 76 ++++--- inst/extdata/ToothGrowth.omv |binary man/read_omv.Rd | 2 man/write_omv.Rd | 16 + vignettes/jmvReadWrite.Rmd | 55 ++++- 16 files changed, 659 insertions(+), 381 deletions(-)
Title: Analyze Big Files Without Loading Them in Memory
Description: A simple set of wrapper functions for data.table::fread() that allows subsetting or
filtering rows and selecting columns of table-formatted files too large for the available RAM.
'b stands for 'big files'. The package is using Unix commands like grep, cut and sed
through (hopefully) intuitive parameters.
bread makes heavy use of Unix commands like grep, sed, wc and cut. They are available
by default in all Unix environments.
For Windows, you need to install those commands externally in order to simulate a
Unix environment and make sure that the executables are in the Windows PATH variable.
To my knowledge, the simplest ways are to install RTools, Git or Cygwin. If they have been
correctly installed (with the expected registry entries), they should be detected on loading
the package and the correct directories will be added automatically to the PATH.
Author: Vincent Guegan [aut, cre]
Maintainer: Vincent Guegan <vincent.guegan@banque-france.fr>
Diff between bread versions 0.1.5 dated 2022-01-17 and 0.1.7 dated 2022-01-19
DESCRIPTION | 16 +++++++++----- MD5 | 12 ++++++---- NAMESPACE | 1 R/bfile_split.R | 58 ++++++++++++++++++++++++++++++++++++++--------------- R/bsep.R |only README.md | 9 +++----- man/bfile_split.Rd | 10 ++++++++- man/bsep.Rd |only 8 files changed, 73 insertions(+), 33 deletions(-)
Title: Parametric Time Warping
Description: Parametric Time Warping aligns patterns, i.e. it aims to
put corresponding features at the same locations. The algorithm
searches for an optimal polynomial describing the warping. It
is possible to align one sample to a reference, several samples
to the same reference, or several samples to several
references. One can choose between calculating individual
warpings, or one global warping for a set of samples and one
reference. Two optimization criteria are implemented: RMS (Root
Mean Square error) and WCC (Weighted Cross Correlation). Both
warping of peak profiles and of peak lists are supported. A
vignette for the latter is contained in the inst/doc directory
of the source package - the vignette source can be found on
the package github site.
Author: Jan Gerretzen [ctb],
Paul Eilers [aut],
Hans Wouters [ctb],
Tom Bloemberg [aut],
Ron Wehrens [aut, cre]
Maintainer: Ron Wehrens <ron.wehrens@gmail.com>
Diff between ptw versions 1.9-15 dated 2019-11-26 and 1.9-16 dated 2022-01-19
DESCRIPTION | 8 +++--- MD5 | 14 +++++------ NAMESPACE | 3 +- R/wccStick.R | 42 +++++++++++++++++++++++------------ build/partial.rdb |binary inst/doc/stickPTW.pdf |binary man/plot.ptw.Rd | 2 - man/ptw.Rd | 59 ++++++++++++++++++++++++++++++-------------------- 8 files changed, 78 insertions(+), 50 deletions(-)
Title: A Super K-Nearest Neighbor (SKNN) Classification Algorithm
Description: It's a Super K-Nearest Neighbor classification method with using kernel density to describe weight of the distance between a training observation and the testing sample.
Author: Yi Ya [aut, cre],
Yarong Yang [aut],
Nader Ebrahimi [aut],
Yoram Rubin [aut],
Jacob Zhang [aut]
Maintainer: Yi Ya <Yi.YA_yaya@hotmail.com>
Diff between SKNN versions 2.0 dated 2021-11-27 and 3.0 dated 2022-01-19
SKNN-2.0/SKNN/R/AKDE.R |only SKNN-2.0/SKNN/R/KDEy.R |only SKNN-2.0/SKNN/R/UKDE.R |only SKNN-2.0/SKNN/man/AKDE.Rd |only SKNN-2.0/SKNN/man/KDEy.Rd |only SKNN-2.0/SKNN/man/UKDE.Rd |only SKNN-3.0/SKNN/DESCRIPTION | 10 ++++----- SKNN-3.0/SKNN/MD5 | 24 +++++++++------------- SKNN-3.0/SKNN/NAMESPACE | 4 ++- SKNN-3.0/SKNN/R/Dist.R | 11 ++-------- SKNN-3.0/SKNN/R/KNN.R |only SKNN-3.0/SKNN/R/SKNN.R | 39 +++++++++++++++++++++--------------- SKNN-3.0/SKNN/man/Dist.Rd | 2 - SKNN-3.0/SKNN/man/KNN.Rd |only SKNN-3.0/SKNN/man/PCAy.Rd | 2 - SKNN-3.0/SKNN/man/SKNN-package.Rd | 41 ++++++++++++++++++++------------------ SKNN-3.0/SKNN/man/SKNN.Rd | 41 ++++++++++++++++++++------------------ 17 files changed, 90 insertions(+), 84 deletions(-)
Title: Robust Estimation in Very Small Samples
Description: Implements the estimation techniques described in Rousseeuw &
Verboven (2002) <doi:10.1016/S0167-9473(02)00078-6> for the location and
scale of very small samples.
Author: Avraham Adler [aut, cph, cre] (<https://orcid.org/0000-0002-3039-0703>)
Maintainer: Avraham Adler <Avraham.Adler@gmail.com>
Diff between revss versions 1.0.2 dated 2021-12-14 and 1.0.3 dated 2022-01-19
revss-1.0.2/revss/tests/test-all.r |only revss-1.0.2/revss/tests/testthat |only revss-1.0.3/revss/DESCRIPTION | 11 +++++------ revss-1.0.3/revss/MD5 | 17 +++++++---------- revss-1.0.3/revss/README.md | 9 ++++++--- revss-1.0.3/revss/build/partial.rdb |binary revss-1.0.3/revss/inst/CITATION | 6 ++++-- revss-1.0.3/revss/inst/NEWS.Rd | 9 +++++++++ revss-1.0.3/revss/inst/tinytest |only revss-1.0.3/revss/tests/tinytest.R |only 10 files changed, 31 insertions(+), 21 deletions(-)
Title: Mapping Averaged Pairwise Information
Description: Mapping Averaged Pairwise Information (MAPI) is an
exploratory method providing graphical representations summarizing the
spatial variation of pairwise metrics (eg. distance, similarity
coefficient, ...) computed between georeferenced samples.
Author: Sylvain Piry [aut, cre] (<https://orcid.org/0000-0002-7717-7555>),
Thomas Campolunghi [aut],
Florent Cestier [aut],
Karine Berthier [aut] (<https://orcid.org/0000-0002-2260-7968>)
Maintainer: Sylvain Piry <sylvain.piry@inrae.fr>
Diff between mapi versions 1.0.4 dated 2021-11-24 and 1.0.5 dated 2022-01-19
DESCRIPTION | 35 +++++++++++++---------------------- MD5 | 12 ++++++------ NEWS.md | 4 +++- R/MAPI_CheckData.R | 2 +- build/partial.rdb |binary data/metric.rda |binary data/samples.rda |binary 7 files changed, 23 insertions(+), 30 deletions(-)
Title: Evolutionary Trait Divergence Between Sister Species and Other
Paired Lineages
Description: Compares the fit of alternative models of continuous trait differentiation between sister species and other paired lineages. Differences in trait means between two lineages arise as they diverge from a common ancestor, and alternative processes of evolutionary divergence are expected to leave unique signatures in the distribution of trait differentiation in datasets comprised of many lineage pairs. Models include approximations of divergent selection, drift, and stabilizing selection. A variety of model extensions facilitate the testing of process-to-pattern hypotheses. Users supply trait data and divergence times for each lineage pair. The fit of alternative models is compared in a likelihood framework.
Author: Sean A. S. Anderson and Jason T. Weir
Maintainer: Sean A. S. Anderson <seanas.anderson@mail.utoronto.ca>
Diff between diverge versions 2.0.1 dated 2021-06-04 and 2.0.4 dated 2022-01-19
DESCRIPTION | 8 +-- MD5 | 20 ++++---- NAMESPACE | 2 R/expected_val.R | 117 +++++++++++++++++++++++++++++-------------------- R/extract_sisters.R | 4 - R/find_mle.R | 5 -- R/model_select.R | 7 ++ man/diverge-package.Rd | 4 - man/expected_val.Rd | 40 ++++++---------- man/extract_sisters.Rd | 2 man/model_select.Rd | 4 + 11 files changed, 117 insertions(+), 96 deletions(-)
Title: Tools for Clinical Research
Description: Every research team have their own script for data management, statistics and
most importantly hemodynamic indices. The purpose is to standardize scripts
utilized in clinical research. The hemodynamic indices can be used in a long-format dataframe,
and add both periods of interest (trigger-periods), and delete artifacts with deleter-files.
Transfer function analysis (Claassen et al. (2016) <doi:10.1177/0271678X15626425>) and
Mx (Czosnyka et al. (1996) <doi:10.1161/01.str.27.10.1829>) can be calculated using this package.
Author: Markus Harboe Olsen [cre, aut],
Christian Riberholt [aut],
Ronan Berg [aut],
Kirsten Moeller [aut]
Maintainer: Markus Harboe Olsen <oel@oelfam.com>
Diff between clintools versions 0.9.0 dated 2022-01-09 and 0.9.1 dated 2022-01-19
DESCRIPTION | 6 ++--- MD5 | 16 ++++++------- NEWS.md | 7 +++++ R/clinmon.R | 2 - R/clinmon_helper.R | 6 ++--- R/pupillometer.R | 7 +++++ R/rrGcomp.R | 62 ++++++++++++++++++++++++----------------------------- man/clinmon.Rd | 2 - man/rrGcomp.Rd | 7 ++--- 9 files changed, 61 insertions(+), 54 deletions(-)
Title: Field Observation Quick Analysis Toolkit
Description: Tools for quickly processing and analyzing
field observation data and air quality data. This
tools contain functions that facilitate analysis
in atmospheric chemistry (especially in ozone
pollution). Some functions of time series are also
applicable to other fields. For detail please view
homepage<https://github.com/tianshu129/foqat>.
Scientific Reference:
1. The Hydroxyl Radical (OH) Reactivity: Roger Atkinson and Janet Arey (2003) <doi:10.1021/cr0206420>.
2. Ozone Formation Potential (OFP): <http://ww2.arb.ca.gov/sites/default/files/barcu/regact/2009/mir2009/mir10.pdf>, Zhang et al.(2021) <doi:10.5194/acp-21-11053-2021>.
3. Aerosol Formation Potential (AFP): Wenjing Wu et al. (2016) <doi:10.1016/j.jes.2016.03.025>.
4. TUV model: <https://www2.acom.ucar.edu/modeling/tropospheric-ultraviolet-and-visible-tuv-radiation-model>.
Author: Tianshu Chen
Maintainer: Tianshu Chen <tianshu129@163.com>
Diff between foqat versions 1.7.1 dated 2021-08-18 and 2.0.0 dated 2022-01-19
DESCRIPTION | 12 ++-- MD5 | 73 ++++++++++++++++-------- NAMESPACE | 35 +++++++++++ R/avri.R | 37 +++++++++--- R/dm8n_batch.R |only R/dm8n_np.R |only R/geom_avri.r |only R/geom_avri_batch.r |only R/geom_ts.r |only R/geom_ts_batch.r |only R/geom_tsw.r |only R/globals.r |only R/loh.R | 132 ++++++++++++++++++++++++++------------------ R/ofp.R | 132 +++++++++++++++++++++++++------------------- R/prop.R |only R/statdf.R | 19 ++++-- R/svri.R |only R/sysdata.rda |binary R/trs.R | 17 +++-- R/tsplotp.R | 2 R/tuv.R | 1 R/tuv_batch.R |only R/tuv_core.R |only R/vocct.R | 104 ++++++++++++++++++++-------------- man/aqi.Rd | 50 ++++++++-------- man/avri.Rd | 147 +++++++++++++++++++++++++------------------------ man/dm8n_batch.Rd |only man/dm8n_np.Rd |only man/fm.Rd | 50 ++++++++-------- man/geom_avri.Rd |only man/geom_avri_batch.Rd |only man/geom_ts.Rd |only man/geom_ts_batch.Rd |only man/geom_tsw.Rd |only man/koh.Rd | 44 +++++++------- man/loh.Rd | 127 +++++++++++++++++++++--------------------- man/met.Rd | 50 ++++++++-------- man/nsvp.Rd | 42 +++++++------- man/ofp.Rd | 137 +++++++++++++++++++++++---------------------- man/prop.Rd |only man/statdf.Rd | 16 ++++- man/svri.Rd |only man/transp.Rd | 40 ++++++------- man/trs.Rd | 106 ++++++++++++++++++----------------- man/tsplotp.Rd | 104 +++++++++++++++++----------------- man/tuv_batch.Rd |only man/tuv_core.Rd |only man/voc.Rd | 52 ++++++++--------- man/vocct.Rd | 133 ++++++++++++++++++++++---------------------- 49 files changed, 925 insertions(+), 737 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-01-19 1.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-01-14 2.1.2
2021-03-30 2.1.1
2021-02-26 2.0.2
2021-01-24 1.1.3
2021-01-21 1.1.2
More information about USA.state.boundaries at CRAN
Permanent link
Title: Tools to Easily Download Data from INSEE BDM Database
Description: Using embedded sdmx queries, get the data of more than 150 000 insee series from bdm database. Have a look at the detailed sdmx web service page with the following link : <https://www.insee.fr/en/information/2868055>.
Author: Hadrien Leclerc [aut, cre],
INSEE [cph]
Maintainer: Hadrien Leclerc <leclerc.hadrien@gmail.com>
Diff between insee versions 1.1.2 dated 2021-10-06 and 1.1.3 dated 2022-01-19
DESCRIPTION | 6 +++--- MD5 | 15 ++++++++------- NEWS.md | 6 ++++++ R/download_idbank_list.R | 19 ++----------------- R/dwn_idbank_files.R |only R/get_idbank_list.R | 19 ++++++++++++++----- R/zzz.R | 4 ++-- README.md | 3 +-- man/get_idbank_list.Rd | 7 ++++++- 9 files changed, 42 insertions(+), 37 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-01-05 0.1.3
2021-10-20 0.1.2
2021-08-04 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-04-10 0.5.0
2019-07-01 0.4.3
2019-02-12 0.4.2
2018-11-16 0.4.1
2018-10-30 0.4.0
2018-07-25 0.3.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-09-08 1.0-1
2017-09-28 1.0-0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-12-18 0.2.5
2016-05-26 0.2.3
2014-12-21 0.1.12
2014-07-03 0.1.10
2014-03-23 0.1.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-05-05 0.1.2
2020-11-02 0.1.1