Title: Plot a Model's Residuals, Response, and Partial Dependence Plots
Description: Plot model surfaces for a wide variety of models
using partial dependence plots and other techniques.
Also plot model residuals and other information on the model.
Author: Stephen Milborrow
Maintainer: Stephen Milborrow <milbo@sonic.net>
Diff between plotmo versions 3.6.1 dated 2021-07-17 and 3.6.2 dated 2022-05-21
DESCRIPTION | 6 +- MD5 | 90 ++++++++++++++++---------------- NEWS | 4 + R/c50.R | 2 R/do.par.R | 4 - R/grid.func.R | 2 R/plotmo.R | 6 +- inst/slowtests/make.README.bat | 2 inst/slowtests/make.bat | 2 inst/slowtests/test.c50.bat | 2 inst/slowtests/test.caret.Rout.save | 2 inst/slowtests/test.caret.bat | 2 inst/slowtests/test.center.bat | 2 inst/slowtests/test.degree.bat | 2 inst/slowtests/test.dots.bat | 2 inst/slowtests/test.fac.bat | 2 inst/slowtests/test.gbm.bat | 2 inst/slowtests/test.glmnet.Rout.save | 4 - inst/slowtests/test.glmnet.bat | 2 inst/slowtests/test.glmnetUtils.bat | 2 inst/slowtests/test.linmod.R | 2 inst/slowtests/test.linmod.Rout.save | 4 - inst/slowtests/test.linmod.bat | 2 inst/slowtests/test.mlr.Rout.save | 2 inst/slowtests/test.mlr.bat | 2 inst/slowtests/test.modguide.bat | 2 inst/slowtests/test.non.earth.Rout.save | 26 ++++----- inst/slowtests/test.non.earth.bat | 2 inst/slowtests/test.parsnip.Rout.save | 24 +++----- inst/slowtests/test.parsnip.bat | 6 +- inst/slowtests/test.partdep.Rout.save | 2 inst/slowtests/test.partdep.bat | 2 inst/slowtests/test.partykit.bat | 2 inst/slowtests/test.plotmo.Rout.save | 2 inst/slowtests/test.plotmo.args.bat | 2 inst/slowtests/test.plotmo.bat | 2 inst/slowtests/test.plotmo.dots.bat | 2 inst/slowtests/test.plotmo.x.bat | 2 inst/slowtests/test.plotmo3.Rout.save | 4 - inst/slowtests/test.plotmo3.bat | 2 inst/slowtests/test.plotres.Rout.save | 4 - inst/slowtests/test.plotres.bat | 2 inst/slowtests/test.pre.Rout.save | 6 +- inst/slowtests/test.pre.bat | 2 inst/slowtests/test.printcall.bat | 2 inst/slowtests/test.unusual.vars.bat | 2 46 files changed, 131 insertions(+), 123 deletions(-)
Title: Read and Write 'jamovi' Files ('.omv')
Description: The free and open a statistical spreadsheet 'jamovi' (www.jamovi.org)
aims to make statistical analyses easy and intuitive. 'jamovi' produces
syntax that can directly be used in R (in connection with the R-package 'jmv').
Having import / export routines for the data files 'jamovi' produces ('.omv')
permits an easy transfer of analyses between 'jamovi' and R.
Author: Sebastian Jentschke [aut, cre]
Maintainer: Sebastian Jentschke <sebastian.jentschke@uib.no>
Diff between jmvReadWrite versions 0.3.1 dated 2022-02-28 and 0.3.2 dated 2022-05-21
DESCRIPTION | 8 - MD5 | 14 +- NEWS.md | 6 R/read_omv.R | 6 README.md | 4 build/vignette.rds |binary inst/doc/jmvReadWrite.html | 293 ++++++++++++++++++++++++--------------------- tests/testthat.R | 10 - 8 files changed, 192 insertions(+), 149 deletions(-)
Title: Basic and Advanced Statistical Power Analysis
Description: This is a collection of tools for conducting both basic and advanced statistical power analysis including correlation, proportion, t-test, one-way ANOVA, two-way ANOVA, linear regression, logistic regression, Poisson regression, mediation analysis, longitudinal data analysis, structural equation modeling and multilevel modeling. It also serves as the engine for conducting power analysis online at <https://webpower.psychstat.org>.
Author: Zhiyong Zhang [aut, cre],
Yujiao Mai [aut],
Miao Yang [ctb]
Maintainer: Zhiyong Zhang <johnnyzhz@gmail.com>
Diff between WebPower versions 0.6 dated 2021-05-18 and 0.7 dated 2022-05-21
WebPower-0.6/WebPower/README.md |only WebPower-0.7/WebPower/DESCRIPTION | 8 WebPower-0.7/WebPower/MD5 | 27 WebPower-0.7/WebPower/NAMESPACE | 6 WebPower-0.7/WebPower/R/webpower.R | 648 +++++++++++---------- WebPower-0.7/WebPower/man/nuniroot.Rd | 3 WebPower-0.7/WebPower/man/plot.webpower.Rd | 2 WebPower-0.7/WebPower/man/print.webpower.Rd | 2 WebPower-0.7/WebPower/man/sem.effect.size.Rd |only WebPower-0.7/WebPower/man/wp.mc.chisq.diff.Rd |only WebPower-0.7/WebPower/man/wp.mc.sem.power.curve.Rd | 2 WebPower-0.7/WebPower/man/wp.mediation.Rd | 2 WebPower-0.7/WebPower/man/wp.poisson.Rd | 6 WebPower-0.7/WebPower/man/wp.regression.Rd | 2 WebPower-0.7/WebPower/man/wp.rmanova.Rd | 3 WebPower-0.7/WebPower/man/wp.sem.chisq.Rd | 3 16 files changed, 374 insertions(+), 340 deletions(-)
Title: Web Interface to 'IsoplotR'
Description: Provides a graphical user interface to the 'IsoplotR' package for radiometric geochronology. The GUI runs in an internet browser and can either be used offline, or hosted on a server to provide online access to the 'IsoplotR' toolbox.
Author: Pieter Vermeesch [aut, cre],
Tim Band [ctb]
Maintainer: Pieter Vermeesch <p.vermeesch@ucl.ac.uk>
Diff between IsoplotRgui versions 4.3 dated 2022-03-07 and 4.4 dated 2022-05-21
DESCRIPTION | 10 MD5 | 54 ++--- R/IsoplotR.R | 8 R/server.R | 16 - build/git.md | 199 ++++++++++-------- inst/www/help/evolution.html | 4 inst/www/help/isochron.html | 9 inst/www/home/news.html | 33 +-- inst/www/js/IsoplotR.js | 280 ++++++++++++++------------ inst/www/js/js2R.js | 25 +- inst/www/js/settings.json | 10 inst/www/locales/en/contextual_help.json | 12 - inst/www/locales/en/dictionary_id.json | 44 ++-- inst/www/locales/en/home_id.json | 2 inst/www/locales/es/contextual_help.json | 29 ++ inst/www/locales/es/dictionary_class.json | 11 - inst/www/locales/es/dictionary_id.json | 10 inst/www/locales/es/home_id.json | 8 inst/www/locales/zh_Hans/contextual_help.json | 10 inst/www/locales/zh_Hans/dictionary_id.json | 2 inst/www/options/CAD.html | 6 inst/www/options/KDE.html | 6 inst/www/options/Th-U.html | 40 ++- inst/www/options/ages.html | 5 inst/www/options/average.html | 6 inst/www/options/isochron.html | 33 +-- inst/www/options/radial.html | 6 inst/www/version.txt | 2 28 files changed, 486 insertions(+), 394 deletions(-)
Title: Statistical Toolbox for Radiometric Geochronology
Description: Plots U-Pb data on Wetherill and Tera-Wasserburg concordia diagrams. Calculates concordia and discordia ages. Performs linear regression of measurements with correlated errors using 'York', 'Titterington' and 'Ludwig' approaches. Generates Kernel Density Estimates (KDEs) and Cumulative Age Distributions (CADs). Produces Multidimensional Scaling (MDS) configurations and Shepard plots of multi-sample detrital datasets using the Kolmogorov-Smirnov distance as a dissimilarity measure. Calculates 40Ar/39Ar ages, isochrons, and age spectra. Computes weighted means accounting for overdispersion. Calculates U-Th-He (single grain and central) ages, logratio plots and ternary diagrams. Processes fission track data using the external detector method and LA-ICP-MS, calculates central ages and plots fission track and other data on radial (a.k.a. 'Galbraith') plots. Constructs total Pb-U, Pb-Pb, Th-Pb, K-Ca, Re-Os, Sm-Nd, Lu-Hf, Rb-Sr and 230Th-U isochrons as well as 230Th-U evolution plots.
Author: Pieter Vermeesch [aut, cre]
Maintainer: Pieter Vermeesch <p.vermeesch@ucl.ac.uk>
Diff between IsoplotR versions 4.3 dated 2022-03-06 and 4.4 dated 2022-05-21
DESCRIPTION | 8 +- MD5 | 60 ++++++++-------- R/ThU.R | 94 +++++++++++-------------- R/age.R | 33 ++++---- R/cad.R | 41 +++++----- R/classes.R | 9 +- R/constants.R | 18 ++-- R/diseq.R | 12 +-- R/evolution.R | 195 ++++++++++++++++++++++++++-------------------------- R/io.R | 34 +++++---- R/isochron.R | 107 +++++++++++++++++++++------- R/kde.R | 34 ++++----- R/peakfit.R | 46 ++++++------ R/radialplot.R | 61 ++++++++-------- R/regression.R | 2 R/titterington.R | 50 +++++++------ R/toolbox.R | 4 - R/weightedmean.R | 32 +++++--- R/york.R | 2 inst/constants.json | 1 man/age.Rd | 35 +++------ man/cad.Rd | 23 +++--- man/classes.Rd | 9 +- man/evolution.Rd | 41 ++++++---- man/isochron.Rd | 30 ++++++-- man/kde.Rd | 23 +++--- man/peakfit.Rd | 29 ++++--- man/radialplot.Rd | 23 +++--- man/read.data.Rd | 21 +++-- man/settings.Rd | 18 ++-- man/weightedmean.Rd | 35 +++++---- 31 files changed, 628 insertions(+), 502 deletions(-)
Title: 'ggplot2' Based Plots with Statistical Details
Description: Extension of 'ggplot2', 'ggstatsplot' creates graphics with
details from statistical tests included in the plots themselves. It
provides an easier syntax to generate information-rich plots for
statistical analysis of continuous (violin plots, scatterplots,
histograms, dot plots, dot-and-whisker plots) or categorical (pie and
bar charts) data. Currently, it supports the most common types of
statistical approaches and tests: parametric, nonparametric, robust,
and Bayesian versions of t-test/ANOVA, correlation analyses,
contingency table analysis, meta-analysis, and regression analyses.
Author: Indrajeet Patil [cre, aut, cph]
Maintainer: Indrajeet Patil <patilindrajeet.science@gmail.com>
Diff between ggstatsplot versions 0.9.1 dated 2022-01-14 and 0.9.2 dated 2022-05-21
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ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-extract_stats.R | 68 ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-ggbarstats.R | 385 - ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-ggbetweenstats.R | 348 - ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-ggcoefstats.R | 721 -- ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-ggcorrmat.R | 271 ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-ggdotplotstats.R | 316 - ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-gghistostats.R | 314 - ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-ggpiestats.R | 559 - ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-ggscatterstats.R | 456 - ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-ggwithinstats.R | 438 - ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-grouped_ggbarstats.R | 214 ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-grouped_ggbetweenstats.R | 192 ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-grouped_ggcorrmat.R | 166 ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-grouped_ggdotplotstats.R | 166 ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-grouped_gghistostats.R | 132 ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-grouped_ggpiestats.R | 201 ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-grouped_ggscatterstats.R | 218 ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-grouped_ggwithinstats.R | 183 ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-helpers.R | 77 ggstatsplot-0.9.2/ggstatsplot/tests/testthat/test-pairwise_ggsignif.R | 488 - 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ggstatsplot-0.9.2/ggstatsplot/vignettes/web_only/paper.bib | 184 ggstatsplot-0.9.2/ggstatsplot/vignettes/web_only/principles.Rmd | 842 +- ggstatsplot-0.9.2/ggstatsplot/vignettes/web_only/purrr_examples.Rmd | 1411 ++-- 222 files changed, 19521 insertions(+), 22100 deletions(-)
Title: Visualizations of High-Dimensional Data
Description: Gives access to data visualisation methods that are relevant from the data scientist's point of view. The flagship idea of 'DataVisualizations' is the mirrored density plot (MD-plot) for either classified or non-classified multivariate data published in Thrun, M.C. et al.: "Analyzing the Fine Structure of Distributions" (2020), PLoS ONE, <DOI:10.1371/journal.pone.0238835>. The MD-plot outperforms the box-and-whisker diagram (box plot), violin plot and bean plot and geom_violin plot of ggplot2. Furthermore, a collection of various visualization methods for univariate data is provided. In the case of exploratory data analysis, 'DataVisualizations' makes it possible to inspect the distribution of each feature of a dataset visually through a combination of four methods. One of these methods is the Pareto density estimation (PDE) of the probability density function (pdf). Additionally, visualizations of the distribution of distances using PDE, the scatter-density plot using PDE for two variables as well as the Shepard density plot and the Bland-Altman plot are presented here. Pertaining to classified high-dimensional data, a number of visualizations are described, such as f.ex. the heat map and silhouette plot. A political map of the world or Germany can be visualized with the additional information defined by a classification of countries or regions. By extending the political map further, an uncomplicated function for a Choropleth map can be used which is useful for measurements across a geographic area. For categorical features, the Pie charts, slope charts and fan plots, improved by the ABC analysis, become usable. More detailed explanations are found in the book by Thrun, M.C.: "Projection-Based Clustering through Self-Organization and Swarm Intelligence" (2018) <DOI:10.1007/978-3-658-20540-9>.
Author: Michael Thrun [aut, cre, cph] ,
Felix Pape [aut, rev],
Onno Hansen-Goos [ctr, ctb],
Hamza Tayyab [ctr, ctb],
Dirk Eddelbuettel [ctr],
Craig Varrichio [ctr],
Alfred Ultsch [dtc, ctb, ctr]
Maintainer: Michael Thrun <m.thrun@gmx.net>
Diff between DataVisualizations versions 1.2.2 dated 2021-01-12 and 1.2.3 dated 2022-05-21
DESCRIPTION | 12 MD5 | 92 NAMESPACE | 164 - R/ABCbarplot.R | 5 R/ClassMDplot.R | 2 R/Classplot.R | 41 R/DensityScatter.R | 68 R/DualaxisClassplot.R | 4 R/InspectCorrelation.R | 30 R/InspectDistances.R | 2 R/InspectVariable.R | 454 ++-- R/MAplot.R | 137 - R/MDplot.R | 1029 +++++----- R/PDEplot.R | 31 R/PDEscatter.R | 4 R/ParetoDensityEstimation.R | 140 - R/Pixelmatrix.R | 249 +- R/PlotProductratio.R | 22 R/QQplot.R | 9 R/RcppExports.R | 30 R/checkFeature.R | 17 R/internpiechart.R | 2 R/smooth1D.R | 10 build/partial.rdb |binary build/vignette.rds |binary data/world_country_polygons.rda |binary inst/NEWS | 12 inst/doc/DataVisualizations.R | 262 +- inst/doc/DataVisualizations.Rmd | 6 inst/doc/DataVisualizations.html | 3871 +++++++++++++++++++------------------- man/ABCbarplot.Rd | 2 man/Choroplethmap.Rd | 8 man/Classplot.Rd | 10 man/DataVisualizations-package.Rd | 2 man/DensityScatter.Rd | 8 man/InspectCorrelation.Rd | 8 man/InspectVariable.Rd | 8 man/MAplot.Rd | 50 man/MDplot.Rd | 41 man/PDEplot.Rd | 6 man/ParetoDensityEstimation.Rd | 45 man/Pixelmatrix.Rd | 88 man/Plot3D.Rd | 2 man/PlotProductratio.Rd | 6 man/QQplot.Rd | 2 src/RcppExports.cpp | 5 vignettes/DataVisualizations.Rmd | 6 47 files changed, 3663 insertions(+), 3339 deletions(-)
More information about DataVisualizations at CRAN
Permanent link
Title: moDel Agnostic Language for Exploration and eXplanation
Description: Any unverified black box model is the path to failure. Opaqueness leads to distrust.
Distrust leads to ignoration. Ignoration leads to rejection.
DALEX package xrays any model and helps to explore and explain its behaviour.
Machine Learning (ML) models are widely used and have various applications in classification
or regression. Models created with boosting, bagging, stacking or similar techniques are often
used due to their high performance. But such black-box models usually lack direct interpretability.
DALEX package contains various methods that help to understand the link between input variables
and model output. Implemented methods help to explore the model on the level of a single instance
as well as a level of the whole dataset.
All model explainers are model agnostic and can be compared across different models.
DALEX package is the cornerstone for 'DrWhy.AI' universe of packages for visual model exploration.
Find more details in (Biecek 2018) <arXiv:1806.08915>.
Author: Przemyslaw Biecek [aut, cre] ,
Szymon Maksymiuk [aut] ,
Hubert Baniecki [aut]
Maintainer: Przemyslaw Biecek <przemyslaw.biecek@gmail.com>
Diff between DALEX versions 2.4.0 dated 2022-02-21 and 2.4.1 dated 2022-05-21
DESCRIPTION | 12 +-- MD5 | 17 ++-- NAMESPACE | 1 R/explain.R | 19 +++- R/misc_loss_functions.R | 73 +++++++++++++++++++ R/misc_yhat.R | 2 R/model_info.R | 3 man/loss_yardstick.Rd |only man/model_info.Rd | 21 ++--- tests/external_tests/external_test_yhat_model_info.R | 51 ++++++++----- 10 files changed, 146 insertions(+), 53 deletions(-)
Title: R Interface to 'TensorFlow'
Description: Interface to 'TensorFlow' <https://www.tensorflow.org/>,
an open source software library for numerical computation using data
flow graphs. Nodes in the graph represent mathematical operations,
while the graph edges represent the multidimensional data arrays
(tensors) communicated between them. The flexible architecture allows
you to deploy computation to one or more 'CPUs' or 'GPUs' in a desktop,
server, or mobile device with a single 'API'. 'TensorFlow' was originally
developed by researchers and engineers working on the Google Brain Team
within Google's Machine Intelligence research organization for the
purposes of conducting machine learning and deep neural networks research,
but the system is general enough to be applicable in a wide variety
of other domains as well.
Author: Daniel Falbel [ctb, cph],
JJ Allaire [aut, cph],
RStudio [cph, fnd],
Yuan Tang [aut, cph] ,
Dirk Eddelbuettel [ctb, cph],
Nick Golding [ctb, cph],
Tomasz Kalinowski [ctb, cph, cre],
Google Inc. [ctb, cph]
Maintainer: Tomasz Kalinowski <tomasz.kalinowski@rstudio.com>
Diff between tensorflow versions 2.8.0 dated 2022-02-09 and 2.9.0 dated 2022-05-21
DESCRIPTION | 11 MD5 | 46 +-- NAMESPACE | 29 ++ NEWS.md | 35 ++ R/eager.R | 66 ++++- R/estimator-generics.R | 7 R/extract.R | 40 ++- R/generics.R | 419 +++++++++++++++++++++++++++++--- R/install.R | 42 +-- R/package.R | 3 R/seed.R | 2 R/shape.R | 12 man/as_tensor.Rd | 11 man/export_savedmodel.Rd | 1 man/install_tensorflow.Rd | 16 - man/shape.Rd | 11 man/train.Rd | 3 man/train_and_evaluate.Rd | 2 tests/testthat/helper-utils.R | 3 tests/testthat/test-as_tensor.R | 46 +++ tests/testthat/test-export-savedmodel.R | 6 tests/testthat/test-generic-methods.R | 124 +++++++++ tests/testthat/test-seed.R | 4 tests/testthat/test-shape.R | 11 24 files changed, 812 insertions(+), 138 deletions(-)
Title: Plot 'rpart' Models: An Enhanced Version of 'plot.rpart'
Description: Plot 'rpart' models. Extends plot.rpart() and text.rpart()
in the 'rpart' package.
Author: Stephen Milborrow
Maintainer: Stephen Milborrow <milbo@sonic.net>
Diff between rpart.plot versions 3.1.0 dated 2021-07-24 and 3.1.1 dated 2022-05-21
DESCRIPTION | 7 +++-- MD5 | 38 +++++++++++++++--------------- NEWS | 6 +++- R/describe.col.R | 2 - inst/slowtests/make.bat | 7 +++-- inst/slowtests/rpart.report.bat | 2 - inst/slowtests/test.describe.col.bat | 2 - inst/slowtests/test.imports.bat | 2 - inst/slowtests/test.na.bat | 2 - inst/slowtests/test.palette.Rout.save | 2 - inst/slowtests/test.palette.bat | 2 - inst/slowtests/test.rpart.plot.Rout.save | 18 +++++++------- inst/slowtests/test.rpart.plot.bat | 2 - inst/slowtests/test.rpart.rules.Rout.save | 2 - inst/slowtests/test.rpart.rules.bat | 2 - inst/slowtests/test.type5.bat | 2 - inst/slowtests/usersplits.bat | 2 - inst/slowtests/vignette.Rout.save | 4 +-- inst/slowtests/vignette.bat | 2 - inst/slowtests/webpage.figs.bat | 2 - 20 files changed, 59 insertions(+), 49 deletions(-)
Title: Classes for Relational Data
Description: Tools to create and modify network objects. The network class can represent a range of relational data types, and supports arbitrary vertex/edge/graph attributes.
Author: Carter T. Butts [aut, cre],
David Hunter [ctb],
Mark Handcock [ctb],
Skye Bender-deMoll [ctb],
Jeffrey Horner [ctb],
Li Wang [ctb],
Pavel N. Krivitsky [ctb] ,
Brendan Knapp [ctb] ,
Michal Bojanowski [ctb],
Chad Klumb [ctb]
Maintainer: Carter T. Butts <buttsc@uci.edu>
Diff between network versions 1.17.1 dated 2021-06-14 and 1.17.2 dated 2022-05-21
network-1.17.1/network/README.md |only network-1.17.2/network/ChangeLog | 3 network-1.17.2/network/DESCRIPTION | 8 - network-1.17.2/network/MD5 | 34 ++-- network-1.17.2/network/build/vignette.rds |binary network-1.17.2/network/inst/CITATION | 2 network-1.17.2/network/inst/doc/networkVignette.pdf |binary network-1.17.2/network/src/access.c | 140 +++++++++++--------- network-1.17.2/network/tests/general.tests.R | 3 network-1.17.2/network/tests/general.tests2.R | 4 network-1.17.2/network/tests/list.attribute.tests.R | 4 network-1.17.2/network/tests/network.access.test.R | 6 network-1.17.2/network/tests/network.battery.R | 4 network-1.17.2/network/tests/oldbench |only network-1.17.2/network/tests/pathological.tests.R | 4 network-1.17.2/network/tests/plotflo.R | 4 network-1.17.2/network/tests/speedTests.R | 4 network-1.17.2/network/tests/testthat.R | 4 network-1.17.2/network/tests/vignette.R | 3 19 files changed, 143 insertions(+), 84 deletions(-)
Title: Convert Decimals to Fractions
Description: Provides functions for converting decimals to a
matrix of numerators and denominators or a character vector of
fractions. Supports mixed or improper fractions, finding common
denominators for vectors of fractions, limiting denominators to powers
of ten, and limiting denominators to a maximum value. Also includes
helper functions for finding the least common multiple and greatest
common divisor for a vector of integers. Implemented using C++ for
maximum speed.
Author: Alexander Rossell Hayes [aut, cre, cph]
Maintainer: Alexander Rossell Hayes <alexander@rossellhayes.com>
Diff between fracture versions 0.2.0 dated 2021-10-25 and 0.2.1 dated 2022-05-21
DESCRIPTION | 8 +-- MD5 | 20 ++++----- NEWS.md | 10 ++++ R/frac_mat.R | 51 ++++++++++++++++++----- R/frac_style.R | 57 +++++++++++++++++++++---- R/fracture.R | 28 +++++++++--- R/sysdata.rda |binary README.md | 90 +++++++++++++++++++++-------------------- man/fracture-package.Rd | 2 tests/testthat/test-frac_mat.R | 23 ++++++++++ tests/testthat/test-fracture.R | 22 ++++++++-- 11 files changed, 223 insertions(+), 88 deletions(-)
Title: Reporting Tables
Description: Reporting tables often have structure that goes beyond simple rectangular
data. The 'rtables' package provides a framework for declaring complex multi-level tabulations
and then applying them to data. This framework models both tabulation and the resulting
tables as hierarchical, tree-like objects which support sibling sub-tables, arbitrary splitting
or grouping of data in row and column dimensions, cells containing multiple values,
and the concept of contextual summary computations. A convenient pipe-able interface is provided
for declaring table layouts and the corresponding computations, and then applying them to data.
Author: Gabriel Becker [aut, cre],
Adrian Waddell [aut],
Daniel Sabanes Bove [ctb],
Maximilian Mordig [ctb]
Maintainer: Gabriel Becker <gabembecker@gmail.com>
Diff between rtables versions 0.5.0 dated 2022-03-31 and 0.5.1 dated 2022-05-21
DESCRIPTION | 10 MD5 | 95 +-- NAMESPACE | 8 NEWS.md | 9 R/00tabletrees.R | 28 R/argument_conventions.R | 12 R/format_rcell.R | 3 R/tree_accessors.R | 78 ++ R/tt_afun_utils.R | 49 + R/tt_compatibility.R | 10 R/tt_dotabulation.R | 23 R/tt_export.R | 18 R/tt_toString.R | 36 - R/utils.R | 1 build/vignette.rds |binary inst/doc/baseline.html | 4 inst/doc/clinical_trials.html | 922 +++++++++++++++----------------- inst/doc/introduction.html | 6 inst/doc/manual_table_construction.html | 4 inst/doc/sorting_pruning.html | 4 inst/doc/subsetting_tables.html | 4 inst/doc/tabulation_concepts.html | 4 inst/doc/tabulation_dplyr.html | 26 man/CellValue.Rd | 5 man/build_table.Rd | 6 man/export_as_pdf.Rd | 9 man/export_as_txt.Rd | 11 man/format_rcell.Rd | 7 man/gen_args.Rd | 9 man/horizontal_sep.Rd |only man/in_rows.Rd | 5 man/lab_name.Rd | 18 man/lyt_args.Rd | 5 man/make_afun.Rd | 3 man/matrix_form-VTableTree-method.Rd | 4 man/rcell.Rd | 8 man/rtable.Rd | 9 man/tabclasses.Rd | 11 man/table_shell.Rd | 6 man/tostring.Rd | 12 tests/testthat/setup-fakedata.R | 3 tests/testthat/test-accessors.R | 23 tests/testthat/test-formatting.R | 16 tests/testthat/test-header-footer.R | 4 tests/testthat/test-lyt-tabulation.R | 19 tests/testthat/test-make-afun.R | 12 tests/testthat/test-printing.R | 40 - tests/testthat/test-regressions.R | 42 + tests/unit_test_results.xml | 637 +++++++++++++++++----- 49 files changed, 1498 insertions(+), 780 deletions(-)
Title: Database Agnostic Package to Generate and Process 'SQL' Queries
in R
Description: Allows the user to generate and execute select, insert, update and delete 'SQL' queries the underlying database without having to explicitly write 'SQL' code.
Author: Alejandro Baranek [cre, aut],
Leonardo Belen [aut]
Maintainer: Alejandro Baranek <abaranek@dc.uba.ar>
Diff between RSQL versions 0.2.0 dated 2022-04-14 and 0.2.1 dated 2022-05-21
DESCRIPTION | 8 +- MD5 | 95 +++++++++++++++--------------- NAMESPACE | 2 NEWS.md | 6 + R/sql-lib.R | 133 ++++++++++++++++++++++++++++++++++++------ R/util-lib.R |only README.md | 3 build/vignette.rds |binary man/RSQL.class.Rd | 63 +++++++++++++++---- man/add_grep_exact_match.Rd | 3 man/add_quotes.Rd | 3 man/cbind_coerced.Rd | 7 +- man/check_fields_values.Rd | 3 man/createRSQL.Rd | 3 man/dequote.Rd | 3 man/df_verify.Rd | 3 man/genLogger.Rd |only man/getLogger.Rd |only man/getMtcarsdbPath.Rd | 3 man/getPackageDir.Rd | 3 man/grapes-IN-grapes.Rd | 7 +- man/is_quoted.Rd | 3 man/needs_quotes.Rd | 3 man/parse_where_clause.Rd | 3 man/re_quote.Rd | 3 man/re_quote_alt.Rd | 3 man/rename_col.Rd | 3 man/replaceNAwithNULL.Rd | 3 man/rm_quotes.Rd | 3 man/rm_vector_quotes.Rd | 3 man/sql_execute_delete.Rd | 3 man/sql_execute_get_insert.Rd | 3 man/sql_execute_insert.Rd | 3 man/sql_execute_select.Rd | 3 man/sql_execute_update.Rd | 3 man/sql_gen_delete.Rd | 3 man/sql_gen_insert.Rd | 3 man/sql_gen_select.Rd | 3 man/sql_gen_update.Rd | 3 man/sql_gen_where.Rd | 3 man/sql_gen_where_list.Rd | 3 man/sql_gen_where_or.Rd | 3 man/sql_retrieve.Rd | 3 man/sql_retrieve_insert.Rd | 3 man/stuff_df_quoted.Rd | 3 man/stuff_quote.Rd | 3 man/trim.Rd | 3 man/trim_leading.Rd | 3 man/trim_trailing.Rd | 3 tests/testthat/test_sql_lib.R | 1 50 files changed, 345 insertions(+), 88 deletions(-)
Title: Non-Parametric Causal Effects of Feasible Interventions Based on
Modified Treatment Policies
Description: Non-parametric estimators for casual effects based on longitudinal modified treatment
policies as described in Diaz, Williams, Hoffman, and Schenck <doi:10.1080/01621459.2021.1955691>, traditional point treatment,
and traditional longitudinal effects. Continuous, binary, and categorical treatments are allowed as well are
censored outcomes. The treatment mechanism is estimated via a density ratio classification procedure
irrespective of treatment variable type. For both continuous and binary outcomes, additive treatment effects
can be calculated and relative risks and odds ratios may be calculated for binary outcomes.
Author: Nicholas Williams [aut, cre, cph]
,
Ivan Diaz [aut, cph]
Maintainer: Nicholas Williams <ntwilliams.personal@gmail.com>
Diff between lmtp versions 1.0.0 dated 2021-09-29 and 1.3.0 dated 2022-05-21
lmtp-1.0.0/lmtp/R/checks-warnings.R |only lmtp-1.0.0/lmtp/R/cross-fit.R |only lmtp-1.0.0/lmtp/R/m-engine.R |only lmtp-1.0.0/lmtp/R/prepare-estimators.R |only lmtp-1.0.0/lmtp/R/r-engine.R |only lmtp-1.0.0/lmtp/R/zzz.R |only lmtp-1.0.0/lmtp/build/vignette.rds |only lmtp-1.0.0/lmtp/inst/doc |only lmtp-1.0.0/lmtp/vignettes |only lmtp-1.3.0/lmtp/DESCRIPTION | 16 lmtp-1.3.0/lmtp/MD5 | 68 - lmtp-1.3.0/lmtp/NAMESPACE | 3 lmtp-1.3.0/lmtp/NEWS.md | 34 lmtp-1.3.0/lmtp/R/checks.R |only lmtp-1.3.0/lmtp/R/contrasts.R | 35 lmtp-1.3.0/lmtp/R/density_ratios.R |only lmtp-1.3.0/lmtp/R/estimators.R | 593 ++++++----- lmtp-1.3.0/lmtp/R/gcomp.R |only lmtp-1.3.0/lmtp/R/lmtp-package.R | 1 lmtp-1.3.0/lmtp/R/lmtp_Task.R |only lmtp-1.3.0/lmtp/R/sdr.R |only lmtp-1.3.0/lmtp/R/sl.R | 12 lmtp-1.3.0/lmtp/R/theta.R | 9 lmtp-1.3.0/lmtp/R/tidy.R | 2 lmtp-1.3.0/lmtp/R/tmle.R |only lmtp-1.3.0/lmtp/R/utils.R | 82 - lmtp-1.3.0/lmtp/README.md | 33 lmtp-1.3.0/lmtp/build/partial.rdb |only lmtp-1.3.0/lmtp/inst/CITATION | 18 lmtp-1.3.0/lmtp/man/lmtp-package.Rd | 7 lmtp-1.3.0/lmtp/man/lmtp_contrast.Rd | 11 lmtp-1.3.0/lmtp/man/lmtp_ipw.Rd | 67 - lmtp-1.3.0/lmtp/man/lmtp_sdr.Rd | 78 - lmtp-1.3.0/lmtp/man/lmtp_sub.Rd | 60 - lmtp-1.3.0/lmtp/man/lmtp_tmle.Rd | 78 - lmtp-1.3.0/lmtp/tests/testthat/test-censoring.R | 30 lmtp-1.3.0/lmtp/tests/testthat/test-checks.R | 205 ++- lmtp-1.3.0/lmtp/tests/testthat/test-dynamic.R | 31 lmtp-1.3.0/lmtp/tests/testthat/test-node_list.R | 1 lmtp-1.3.0/lmtp/tests/testthat/test-point_treatment.R | 12 lmtp-1.3.0/lmtp/tests/testthat/test-shifted.R |only lmtp-1.3.0/lmtp/tests/testthat/test-time_varying_treatment.R | 19 42 files changed, 877 insertions(+), 628 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-03-21 0.1.3
2022-03-15 0.1.1
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2021-11-26 3.2
2021-09-26 3.1
2021-09-21 3.0
2021-06-17 2.2
2021-05-20 2.1
2020-01-10 2.0
2017-03-21 1.4
2016-06-06 1.3
2016-05-09 1.2
2015-02-16 1.0
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2017-01-17 0.4.2
2016-07-13 0.4.1
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2015-10-22 0.3.0
2014-07-29 0.1.3
2014-04-11 0.1.1
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2018-05-21 0.3-0
2016-12-23 0.2-5
2015-07-10 0.2-4
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2013-12-02 0.2-2
2013-11-01 0.2-1
2013-08-22 0.2
2013-07-19 0.1-1
2013-07-18 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-01-28 1.1.1
2020-04-06 1.1.0
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2019-11-04 1.0.0
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2020-10-19 0.3.5
2019-03-04 0.1.3
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2019-12-04 1.2.4
2018-12-14 1.2.3
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Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-04-12 2.1
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2017-03-21 1.3
2015-01-27 1.1
2015-01-08 1.0-9
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-03-16 1.0.1.4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-03-01 5.97
2020-11-05 5.91
2020-06-14 5.89
2020-04-12 5.87
2020-03-02 5.79
2020-02-17 5.71
2020-01-24 5.69
2020-01-19 5.63
2020-01-09 5.57
2019-10-08 4.59
2019-09-09 4.51
2019-07-19 3.19
2019-05-07 2.37
2018-02-11 1.41
2018-01-05 1.37
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-09-27 2.3
2021-04-09 2.2
2019-03-12 2.1
2018-02-17 2.0
2017-12-07 1.2.1
2017-06-20 1.2
2016-06-27 1.1.2
2015-09-08 1.1
2014-09-24 1.0
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2022-03-22 4.1
2021-10-05 4.0
2021-03-22 3.43
2021-03-08 3.41
2020-10-13 3.31
2020-05-02 2.11
2020-01-09 2.0
2018-02-01 1.7
2016-05-19 1.5
2016-05-07 1.3
2016-04-25 1.2
2015-12-09 1.1
2015-11-06 1.0
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2018-01-25 2018.1-24
2017-03-02 2017.3-2
2016-01-02 2016.1-2
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2021-09-08 4.1
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2019-08-02 1.0.5
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-04-30 2.1
2017-10-23 2.0
2017-05-02 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-09 0.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-04-13 0.1.3
2018-10-01 0.1.2
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2022-02-09 0.3.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-01-08 0.5-5
2018-05-21 0.5-4
2016-12-23 0.5-3
2015-07-10 0.5-2
2015-04-19 0.5-1
2015-01-06 0.5
2014-08-04 0.4-2
2014-01-14 0.4-1
2013-11-27 0.4
2013-10-31 0.3
2013-08-22 0.2-2
2013-07-11 0.2-1
2012-01-10 0.2
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2013-10-26 1.0
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2017-07-26 0.1.0