Sun, 11 Sep 2022

Package latex2exp updated to version 0.9.5 with previous version 0.9.4 dated 2022-03-02

Title: Use LaTeX Expressions in Plots
Description: Parses and converts LaTeX math formulas to R's plotmath expressions, used to enter mathematical formulas and symbols to be rendered as text, axis labels, etc. throughout R's plotting system.
Author: Stefano Meschiari [aut, cre]
Maintainer: Stefano Meschiari <stefano.meschiari@gmail.com>

Diff between latex2exp versions 0.9.4 dated 2022-03-02 and 0.9.5 dated 2022-09-11

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Package sfhotspot updated to version 0.7.0 with previous version 0.2.0 dated 2022-02-14

Title: Hot-Spot Analysis with Simple Features
Description: Identify and understand clusters of points (typically representing the locations of places or events) stored in simple-features (SF) objects. This is useful for analysing, for example, hot-spots of crime events. The package emphasises producing results from point SF data in a single step using reasonable default values for all other arguments, to aid rapid data analysis by users who are starting out. Functions available include kernel density estimation (for details, see Yip (2020) <doi:10.22224/gistbok/2020.1.12>), analysis of spatial association (Getis and Ord (1992) <doi:10.1111/j.1538-4632.1992.tb00261.x>) and hot-spot classification (Chainey (2020) ISBN:158948584X).
Author: Matt Ashby [aut, cre]
Maintainer: Matt Ashby <matthew.ashby@ucl.ac.uk>

Diff between sfhotspot versions 0.2.0 dated 2022-02-14 and 0.7.0 dated 2022-09-11

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Package rsparse updated to version 0.5.1 with previous version 0.5.0 dated 2021-11-30

Title: Statistical Learning on Sparse Matrices
Description: Implements many algorithms for statistical learning on sparse matrices - matrix factorizations, matrix completion, elastic net regressions, factorization machines. Also 'rsparse' enhances 'Matrix' package by providing methods for multithreaded <sparse, dense> matrix products and native slicing of the sparse matrices in Compressed Sparse Row (CSR) format. List of the algorithms for regression problems: 1) Elastic Net regression via Follow The Proximally-Regularized Leader (FTRL) Stochastic Gradient Descent (SGD), as per McMahan et al(, <doi:10.1145/2487575.2488200>) 2) Factorization Machines via SGD, as per Rendle (2010, <doi:10.1109/ICDM.2010.127>) List of algorithms for matrix factorization and matrix completion: 1) Weighted Regularized Matrix Factorization (WRMF) via Alternating Least Squares (ALS) - paper by Hu, Koren, Volinsky (2008, <doi:10.1109/ICDM.2008.22>) 2) Maximum-Margin Matrix Factorization via ALS, paper by Rennie, Srebro (2005, <doi:10.1145/110 [...truncated...]
Author: Dmitriy Selivanov [aut, cre, cph] , David Cortes [ctb], Drew Schmidt [ctb] , Wei-Chen Chen [ctb]
Maintainer: Dmitriy Selivanov <ds@rexy.ai>

Diff between rsparse versions 0.5.0 dated 2021-11-30 and 0.5.1 dated 2022-09-11

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Package PL94171 updated to version 1.1.2 with previous version 1.1.1 dated 2022-08-25

Title: Tabulate P.L. 94-171 Redistricting Data Summary Files
Description: Tools to process legacy format summary redistricting data files produced by the United States Census Bureau pursuant to P.L. 94-171. These files are generally available earlier but are difficult to work with as-is.
Author: Cory McCartan [aut, cre], Christopher T. Kenny [aut]
Maintainer: Cory McCartan <cmccartan@g.harvard.edu>

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Package lessR updated to version 4.2.3 with previous version 4.2.2 dated 2022-07-13

Title: Less Code, More Results
Description: Each function accomplishes the work of several or more standard R functions. For example, two function calls, Read() and CountAll(), read the data and generate summary statistics for all variables in the data frame, plus histograms and bar charts as appropriate. Other functions provide for comprehensive summary statistics via pivot tables, a comprehensive regression analysis, analysis of variance and t-test, visualizations including the Violin/Box/Scatter plot for a numerical variable, bar chart, histogram, box plot, density curves, calibrated power curve, reading multiple data formats with the same function call, variable labels, color themes, and Trellis graphics. Also includes a confirmatory factor analysis of multiple indicator measurement models, pedagogical routines for data simulation such as for the Central Limit Theorem, generation and rendering of R markdown instructions for interpretative output, and interactive visualizations.
Author: David Gerbing, The School of Business, Portland State University
Maintainer: David W. Gerbing <gerbing@pdx.edu>

Diff between lessR versions 4.2.2 dated 2022-07-13 and 4.2.3 dated 2022-09-11

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Package DIMORA updated to version 0.3.0 with previous version 0.2.0 dated 2021-04-16

Title: Diffusion Models R Analysis
Description: The implemented methods are: Standard Bass model, Generalized Bass model (with rectangular shock, exponential shock, and mixed shock. You can choose to add from 1 to 3 shocks), Guseo-Guidolin model and Variable Potential Market model, and UCRCD model. The Bass model consists of a simple differential equation that describes the process of how new products get adopted in a population, the Generalized Bass model is a generalization of the Bass model in which there is a "carrier" function x(t) that allows to change the speed of time sliding. In some real processes the reachable potential of the resource available in a temporal instant may appear to be not constant over time, because of this we use Variable Potential Market model, in which the Guseo-Guidolin has a particular specification for the market function. The UCRCD model (Unbalanced Competition and Regime Change Diachronic) is a diffusion model used to capture the dynamics of the competitive or collaborative transition.
Author: Zanghi Federico, Savio Andrea, Filippo Ziliotto
Maintainer: Savio Andrea <svandr97@gmail.com>

Diff between DIMORA versions 0.2.0 dated 2021-04-16 and 0.3.0 dated 2022-09-11

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Package archeofrag updated to version 0.8.2 with previous version 0.8 dated 2022-03-09

Title: Refitting and Spatial Analysis in Archaeology
Description: Methods to analyse fragmented objects in archaeology using refitting relationships between fragments scattered in archaeological spatial units (e.g. stratigraphic layers). Graphs and graph theory are used to model archaeological observations. The package is mainly based on the 'igraph' package for graph analysis. Functions can: 1) create, manipulate, and simulate fragmentation graphs, 2) measure the cohesion and admixture of archaeological spatial units, and 3) characterise the topology of a specific set of refitting relationships. An empirical dataset is also provided as an example. Documentation about 'archeofrag' is provided by the vignette included in this package and by the accompanying scientific papers: Plutniak (2021, Journal of Archaeological Science, <doi:10.1016/j.jas.2021.105501>) and Plutniak (2022, Journal of Open Source Software, <doi:10.21105/joss.04335>).
Author: Sebastien Plutniak [aut, cre]
Maintainer: Sebastien Plutniak <sebastien.plutniak@posteo.net>

Diff between archeofrag versions 0.8 dated 2022-03-09 and 0.8.2 dated 2022-09-11

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Package itsdm updated to version 0.1.3 with previous version 0.1.2 dated 2022-06-20

Title: Isolation Forest-Based Presence-Only Species Distribution Modeling
Description: Collection of R functions to do purely presence-only species distribution modeling with isolation forest (iForest) and its variations such as Extended isolation forest and SCiForest. See the details of these methods in references: Liu, F.T., Ting, K.M. and Zhou, Z.H. (2008) <doi:10.1109/ICDM.2008.17>, Hariri, S., Kind, M.C. and Brunner, R.J. (2019) <doi:10.1109/TKDE.2019.2947676>, Liu, F.T., Ting, K.M. and Zhou, Z.H. (2010) <doi:10.1007/978-3-642-15883-4_18>, Guha, S., Mishra, N., Roy, G. and Schrijvers, O. (2016) <https://proceedings.mlr.press/v48/guha16.html>, Cortes, D. (2021) <arXiv:2110.13402>. Additionally, Shapley values are used to explain model inputs and outputs. See details in references: Shapley, L.S. (1953) <doi:10.1515/9781400881970-018>, Lundberg, S.M. and Lee, S.I. (2017) <https://dl.acm.org/doi/abs/10.5555/3295222.3295230>, Molnar, C. (2020) <ISBN:978-0-244-76852-2>, Å trumbelj, E. and Kononenko, I. (2014) <doi:10.1007 [...truncated...]
Author: Lei Song [aut, cre] , Lyndon Estes [ths]
Maintainer: Lei Song <lsong@clarku.edu>

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Package DSWE updated to version 1.6.2 with previous version 1.6.1 dated 2022-07-18

Title: Data Science for Wind Energy
Description: Data science methods used in wind energy applications. Current functionalities include creating a multi-dimensional power curve model, performing power curve function comparison, covariate matching, and energy decomposition. Relevant works for the developed functions are: funGP() - Prakash et al. (2022) <doi:10.1080/00401706.2021.1905073>, AMK() - Lee et al. (2015) <doi:10.1080/01621459.2014.977385>, tempGP() - Prakash et al. (2022) <doi:10.1080/00401706.2022.2069158>, ComparePCurve() - Ding et al. (2021) <doi:10.1016/j.renene.2021.02.136>, deltaEnergy() - Latiffianti et al. (2022) <doi:10.1002/we.2722>, syncSize() - Latiffianti et al. (2022) <doi:10.1002/we.2722>, imptPower() - Latiffianti et al. (2022) <doi:10.1002/we.2722>, All other functions - Ding (2019, ISBN:9780429956508).
Author: Nitesh Kumar [aut], Abhinav Prakash [aut], Yu Ding [aut, cre], Effi Latiffianti [ctb, cph]
Maintainer: Yu Ding <yuding@tamu.edu>

Diff between DSWE versions 1.6.1 dated 2022-07-18 and 1.6.2 dated 2022-09-11

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Package lrstat updated to version 0.1.8 with previous version 0.1.7 dated 2022-08-29

Title: Power and Sample Size Calculation for Non-Proportional Hazards
Description: Performs power and sample size calculation for non-proportional hazards model using the Fleming-Harrington family of weighted log-rank tests. The sequentially calculated log-rank test score statistics are assumed to have independent increments as characterized in Anastasios A. Tsiatis (1982) <doi:10.1080/01621459.1982.10477898>. The mean and variance of log-rank test score statistics are calculated based on Kaifeng Lu (2021) <doi:10.1002/pst.2069>. The boundary crossing probabilities are calculated using the recursive integration algorithm described in Christopher Jennison and Bruce W. Turnbull (2000, ISBN:0849303168).
Author: Kaifeng Lu
Maintainer: Kaifeng Lu <kaifenglu@gmail.com>

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Package flextable updated to version 0.8.0 with previous version 0.7.3 dated 2022-08-09

Title: Functions for Tabular Reporting
Description: Create pretty tables for 'HTML', 'PDF', 'Microsoft Word', 'Microsoft PowerPoint' documents from 'R Markdown' and as 'Grid Graphics' objects. Functions are provided to let users create tables, modify and format their content. It also extends package 'officer' that does not contain any feature for customized tabular reporting.
Author: David Gohel [aut, cre], Clementine Jager [ctb], Panagiotis Skintzos [aut], Quentin Fazilleau [ctb], Maxim Nazarov [ctb] , Titouan Robert [ctb], Michael Barrowman [ctb] , Atsushi Yasumoto [ctb] , Paul Julian [ctb] , Sean Browning [ctb] , Remi Theriaul [...truncated...]
Maintainer: David Gohel <david.gohel@ardata.fr>

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Package pcts updated to version 0.15.3 with previous version 0.15.2 dated 2022-01-12

Title: Periodically Correlated and Periodically Integrated Time Series
Description: Classes and methods for modelling and simulation of periodically correlated (PC) and periodically integrated time series. Compute theoretical periodic autocovariances and related properties of PC autoregressive moving average models. Some original methods including Boshnakov & Iqelan (2009) <doi:10.1111/j.1467-9892.2009.00617.x>, Boshnakov (1996) <doi:10.1111/j.1467-9892.1996.tb00281.x>.
Author: Georgi N. Boshnakov [aut, cre]
Maintainer: Georgi N. Boshnakov <georgi.boshnakov@manchester.ac.uk>

Diff between pcts versions 0.15.2 dated 2022-01-12 and 0.15.3 dated 2022-09-11

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Package ompr updated to version 1.0.3 with previous version 1.0.2 dated 2022-01-31

Title: Model and Solve Mixed Integer Linear Programs
Description: Model mixed integer linear programs in an algebraic way directly in R. The model is solver-independent and thus offers the possibility to solve a model with different solvers. It currently only supports linear constraints and objective functions. See the 'ompr' website <https://dirkschumacher.github.io/ompr/> for more information, documentation and examples.
Author: Dirk Schumacher [aut, cre]
Maintainer: Dirk Schumacher <mail@dirk-schumacher.net>

Diff between ompr versions 1.0.2 dated 2022-01-31 and 1.0.3 dated 2022-09-11

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More information about ompr at CRAN
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Package text2vec updated to version 0.6.2 with previous version 0.6.1 dated 2022-04-21

Title: Modern Text Mining Framework for R
Description: Fast and memory-friendly tools for text vectorization, topic modeling (LDA, LSA), word embeddings (GloVe), similarities. This package provides a source-agnostic streaming API, which allows researchers to perform analysis of collections of documents which are larger than available RAM. All core functions are parallelized to benefit from multicore machines.
Author: Dmitriy Selivanov [aut, cre, cph], Manuel Bickel [aut, cph] , Qing Wang [aut, cph]
Maintainer: Dmitriy Selivanov <selivanov.dmitriy@gmail.com>

Diff between text2vec versions 0.6.1 dated 2022-04-21 and 0.6.2 dated 2022-09-11

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Package mixSSG updated to version 2.1.1 with previous version 1.1.1 dated 2022-08-22

Title: Clustering Using Mixtures of Sub Gaussian Stable Distributions
Description: Developed for model-based clustering using the finite mixtures of skewed sub-Gaussian stable distributions developed by Teimouri (2022) <arXiv:2205.14067> and estimating parameters of the symmetric stable distribution within the Bayesian framework.
Author: Mahdi Teimouri [aut, cre, cph, ctb]
Maintainer: Mahdi Teimouri <teimouri@aut.ac.ir>

Diff between mixSSG versions 1.1.1 dated 2022-08-22 and 2.1.1 dated 2022-09-11

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Package LifeInsuranceContracts updated to version 0.0.4 with previous version 0.0.3 dated 2021-09-01

Title: Framework for Traditional Life Insurance Contracts
Description: R6 classes to model traditional life insurance contracts like annuities, whole life insurances or endowments. Such life insurance contracts provide a guaranteed interest and are not directly linked to the performance of a particular investment vehicle. However, they typically provide (discretionary) profit participation. This package provides a framework to model such contracts in a very generic (cash-flow-based) way and includes modelling profit participation schemes, dynamic increases or more general contract layers, as well as contract changes (like sum increases or premium waivers). All relevant quantities like premium decomposition, reserves and benefits over the whole contract period are calculated and potentially exported to excel. Mortalities are given using the 'MortalityTables' package.
Author: Reinhold Kainhofer [aut, cre]
Maintainer: Reinhold Kainhofer <reinhold@kainhofer.com>

Diff between LifeInsuranceContracts versions 0.0.3 dated 2021-09-01 and 0.0.4 dated 2022-09-11

 DESCRIPTION                                            |   16 
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 NAMESPACE                                              |   17 
 R/HelperFunctions.R                                    |   54 
 R/InsuranceContract.R                                  |  173 
 R/InsuranceParameters.R                                |  125 
 R/InsuranceTarif.R                                     |  274 -
 R/exportInsuranceContractExample.R                     |    3 
 R/exportInsuranceContract_xlsx.R                       |    2 
 R/showVmGlgExamples.R                                  |  349 +
 build/vignette.rds                                     |binary
 inst/Beispiele/Example_Endowment.R                     |    9 
 inst/doc/using-the-lifeinsurancecontracts-package.R    |    3 
 inst/doc/using-the-lifeinsurancecontracts-package.Rmd  |    5 
 inst/doc/using-the-lifeinsurancecontracts-package.html | 4192 ++++++++++-------
 man/InsuranceContract.ParameterDefaults.Rd             |   46 
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 man/InsuranceTarif.Rd                                  |  220 
 man/ProfitParticipation.Rd                             |   66 
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 vignettes/using-the-lifeinsurancecontracts-package.Rmd |    5 
 36 files changed, 3900 insertions(+), 1972 deletions(-)

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Package pedmod updated to version 0.2.4 with previous version 0.2.3 dated 2022-06-22

Title: Pedigree Models
Description: Provides functions to estimate mixed probit models using, for instance, pedigree data like in <doi:10.1002/sim.1603>. The models are also commonly called liability threshold models. The approximation is based on direct log marginal likelihood approximations like the randomized Quasi-Monte Carlo suggested by <doi:10.1198/106186002394> with a similar procedure to approximate the derivatives. The minimax tilting method suggested by <doi:10.1111/rssb.12162> is also supported. Graph-based methods are also provided that can be used to simplify pedigrees.
Author: Benjamin Christoffersen [cre, aut] , Alan Genz [cph], Frank Bretz [cph], Bjoern Bornkamp [cph], Torsten Hothorn [cph], Christophe Dutang [cph], Diethelm Wuertz [cph], R-core [cph], Leo Belzile [cph], Zdravko Botev [cph]
Maintainer: Benjamin Christoffersen <boennecd@gmail.com>

Diff between pedmod versions 0.2.3 dated 2022-06-22 and 0.2.4 dated 2022-09-11

 DESCRIPTION          |    6 ++---
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 NEWS.md              |    3 ++
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Package CytobankBridgeR (with last version 1.0.0) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2017-12-23 1.0.0

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Package CytobankAPI (with last version 2.0.0) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2022-03-31 2.0.0
2021-10-04 1.4.0
2018-11-23 1.3.0
2018-07-06 1.2.0
2018-05-06 1.1.2
2017-08-10 1.1.0
2017-06-15 1.0.1.1
2017-04-13 1.0.1
2017-01-12 1.0.0

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Package MatrixModels updated to version 0.5-1 with previous version 0.5-0 dated 2021-03-02

Title: Modelling with Sparse and Dense Matrices
Description: Modelling with sparse and dense 'Matrix' matrices, using modular prediction and response module classes.
Author: Douglas Bates <bates@stat.wisc.edu> and Martin Maechler <maechler@stat.math.ethz.ch>
Maintainer: Martin Maechler <mmaechler+Matrix@gmail.com>

Diff between MatrixModels versions 0.5-0 dated 2021-03-02 and 0.5-1 dated 2022-09-11

 DESCRIPTION     |   12 ++++++------
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 NAMESPACE       |    1 +
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 R/modelMatrix.R |    8 ++++----
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Package OBASpatial updated to version 1.9 with previous version 1.8 dated 2021-01-18

Title: Objective Bayesian Analysis for Spatial Regression Models
Description: It makes an objective Bayesian analysis of the spatial regression model using both the normal (NSR) and student-T (TSR) distributions. The functions provided give prior and posterior objective densities and allow default Bayesian estimation of the model regression parameters. Details can be found in Ordonez et al. (2020) <arXiv:2004.04341>.
Author: Alejandro Ordonez, Marcos O. Prates , Larissa A. Matos, Victor H. Lachos.
Maintainer: Alejandro Ordonez <ordonezjosealejandro@gmail.com>

Diff between OBASpatial versions 1.8 dated 2021-01-18 and 1.9 dated 2022-09-11

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 16 files changed, 299 insertions(+), 232 deletions(-)

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