Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-07-19 1.0-5
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-04-01 0.4.0
Title: Required 'libphonenumber' jars for the 'dialr' Package
Description: Collects 'libphonenumber' jars required for the
'dialr' package.
Author: Danny Smith [aut, cre],
Google Inc. [ctb, cph] ,
Vonage Holdings Corp. [ctb, cph] ,
Ian Galpin [ctb, cph] ,
Ben Gertzfield [ctb, cph]
Maintainer: Danny Smith <danny@gorcha.org>
Diff between dialrjars versions 8.12.54 dated 2022-08-24 and 8.13.2 dated 2022-12-07
dialrjars-8.12.54/dialrjars/inst/java/carrier-1.180.jar |only dialrjars-8.12.54/dialrjars/inst/java/geocoder-2.190.jar |only dialrjars-8.12.54/dialrjars/inst/java/libphonenumber-8.12.54.jar |only dialrjars-8.12.54/dialrjars/inst/java/prefixmapper-2.190.jar |only dialrjars-8.13.2/dialrjars/DESCRIPTION | 6 dialrjars-8.13.2/dialrjars/MD5 | 28 +-- dialrjars-8.13.2/dialrjars/NAMESPACE | 6 dialrjars-8.13.2/dialrjars/NEWS.md | 60 +++++++ dialrjars-8.13.2/dialrjars/R/dialrjars.R | 6 dialrjars-8.13.2/dialrjars/README.md | 56 +++---- dialrjars-8.13.2/dialrjars/inst/COPYRIGHTS | 18 +- dialrjars-8.13.2/dialrjars/inst/java/carrier-1.186.jar |only dialrjars-8.13.2/dialrjars/inst/java/geocoder-2.196.jar |only dialrjars-8.13.2/dialrjars/inst/java/libphonenumber-8.13.2.jar |only dialrjars-8.13.2/dialrjars/inst/java/prefixmapper-2.196.jar |only dialrjars-8.13.2/dialrjars/java/README | 14 - dialrjars-8.13.2/dialrjars/man/dialrjars-package.Rd | 66 ++++---- dialrjars-8.13.2/dialrjars/tests/testthat.R | 8 - dialrjars-8.13.2/dialrjars/tests/testthat/test-dialrjars.R | 76 +++++----- 19 files changed, 202 insertions(+), 142 deletions(-)
Title: (Non)Additive Genetic Relatedness Matrices
Description: Constructs (non)additive genetic relationship matrices, and their
inverses, from a pedigree to be used in linear mixed effect models (A.K.A.
the 'animal model'). Also includes other functions to facilitate the use of
animal models. Some functions have been created to be used in conjunction
with the R package 'asreml' for the 'ASReml' software, which can be
obtained upon purchase from 'VSN' international
(<https://vsni.co.uk/software/asreml>).
Author: Matthew Wolak [cre, aut]
Maintainer: Matthew Wolak <matthewwolak@gmail.com>
Diff between nadiv versions 2.17.1 dated 2021-04-06 and 2.17.2 dated 2022-12-07
nadiv-2.17.1/nadiv/man/pin.Rd |only nadiv-2.17.1/nadiv/src/fcoeff.cc |only nadiv-2.17.2/nadiv/DESCRIPTION | 10 nadiv-2.17.2/nadiv/MD5 | 60 ++--- nadiv-2.17.2/nadiv/NAMESPACE | 2 nadiv-2.17.2/nadiv/NEWS.md | 28 ++ nadiv-2.17.2/nadiv/R/ggcontrib.R | 10 nadiv-2.17.2/nadiv/R/grfx.R | 2 nadiv-2.17.2/nadiv/R/makeA.R | 16 - nadiv-2.17.2/nadiv/R/makeAinv.R | 38 ++- nadiv-2.17.2/nadiv/R/makeDsim.R | 2 nadiv-2.17.2/nadiv/R/makeGGAinv.R | 15 - nadiv-2.17.2/nadiv/R/makeM.R |only nadiv-2.17.2/nadiv/R/makeMinv.R | 12 - nadiv-2.17.2/nadiv/R/makeS.R | 7 nadiv-2.17.2/nadiv/R/makeSdsim.R | 2 nadiv-2.17.2/nadiv/R/makeTinvDF.R | 10 nadiv-2.17.2/nadiv/R/nadiv-datasets.R | 22 + nadiv-2.17.2/nadiv/R/nadiv-deprecated.R |only nadiv-2.17.2/nadiv/R/proLik.R | 275 +++++++++++++++++++++++- nadiv-2.17.2/nadiv/R/remlSupport.R | 33 +- nadiv-2.17.2/nadiv/README.md | 6 nadiv-2.17.2/nadiv/data/Wray90.rda |only nadiv-2.17.2/nadiv/inst/CITATION | 1 nadiv-2.17.2/nadiv/man/Wray90.Rd |only nadiv-2.17.2/nadiv/man/makeM.Rd |only nadiv-2.17.2/nadiv/man/makeMinv.Rd | 4 nadiv-2.17.2/nadiv/man/nadiv-deprecated.Rd |only nadiv-2.17.2/nadiv/man/pin-deprecated.Rd |only nadiv-2.17.2/nadiv/man/proLik.Rd | 24 +- nadiv-2.17.2/nadiv/src/ainv.cc | 329 ++++++----------------------- nadiv-2.17.2/nadiv/src/diif.cc |only nadiv-2.17.2/nadiv/src/dij.cc | 64 ++--- nadiv-2.17.2/nadiv/src/minv.cc | 96 -------- nadiv-2.17.2/nadiv/src/nadiv.h | 15 + nadiv-2.17.2/nadiv/src/sinv.cc | 15 - 36 files changed, 598 insertions(+), 500 deletions(-)
Title: Extract 'REDCap' Databases into Tidy 'Tibble's
Description: Convert 'REDCap' exports into tidy tables for easy handling of 'REDCap' repeat instruments and event arms.
Author: Richard Hanna [aut, cre],
Stephan Kadauke [aut],
Ezra Porter [aut]
Maintainer: Richard Hanna <richardshanna91@gmail.com>
Diff between REDCapTidieR versions 0.1.3 dated 2022-10-03 and 0.2.0 dated 2022-12-07
REDCapTidieR-0.1.3/REDCapTidieR/R/bind_tables.R |only REDCapTidieR-0.1.3/REDCapTidieR/R/extract_table.R |only REDCapTidieR-0.1.3/REDCapTidieR/R/read_redcap_tidy.R |only REDCapTidieR-0.1.3/REDCapTidieR/inst/doc/longitudinal_redcap.R |only REDCapTidieR-0.1.3/REDCapTidieR/inst/doc/longitudinal_redcap.Rmd |only REDCapTidieR-0.1.3/REDCapTidieR/inst/doc/longitudinal_redcap.html |only REDCapTidieR-0.1.3/REDCapTidieR/man/bind_tables.Rd |only REDCapTidieR-0.1.3/REDCapTidieR/man/checkbox_appender.Rd |only REDCapTidieR-0.1.3/REDCapTidieR/man/extract_table.Rd |only REDCapTidieR-0.1.3/REDCapTidieR/man/extract_tables.Rd |only REDCapTidieR-0.1.3/REDCapTidieR/man/figures/redcaptidier_demo.gif |only REDCapTidieR-0.1.3/REDCapTidieR/man/read_redcap_tidy.Rd |only REDCapTidieR-0.1.3/REDCapTidieR/tests/testthat/test-bind_tables.R |only REDCapTidieR-0.1.3/REDCapTidieR/tests/testthat/test-extract_table.R |only REDCapTidieR-0.1.3/REDCapTidieR/tests/testthat/test-read_redcap_tidy.R |only REDCapTidieR-0.1.3/REDCapTidieR/vignettes/longitudinal_redcap.Rmd |only REDCapTidieR-0.1.3/REDCapTidieR/vignettes/record_status_dash.png |only REDCapTidieR-0.1.3/REDCapTidieR/vignettes/redcaptidier_demo.gif |only REDCapTidieR-0.1.3/REDCapTidieR/vignettes/redcaptidier_longitudinal_db.RDS |only REDCapTidieR-0.1.3/REDCapTidieR/vignettes/superheroes_oneshot.RDS |only REDCapTidieR-0.1.3/REDCapTidieR/vignettes/superheroes_tidy.RDS |only REDCapTidieR-0.1.3/REDCapTidieR/vignettes/superheroes_tidy_output.RDS |only REDCapTidieR-0.2.0/REDCapTidieR/DESCRIPTION | 28 REDCapTidieR-0.2.0/REDCapTidieR/MD5 | 190 - REDCapTidieR-0.2.0/REDCapTidieR/NAMESPACE | 37 REDCapTidieR-0.2.0/REDCapTidieR/NEWS.md | 49 REDCapTidieR-0.2.0/REDCapTidieR/R/bind_tibbles.R |only REDCapTidieR-0.2.0/REDCapTidieR/R/checks.R | 266 + REDCapTidieR-0.2.0/REDCapTidieR/R/clean_redcap.R | 96 REDCapTidieR-0.2.0/REDCapTidieR/R/clean_redcap_long.R | 170 REDCapTidieR-0.2.0/REDCapTidieR/R/deprecated.R |only REDCapTidieR-0.2.0/REDCapTidieR/R/extract_tibble.R |only REDCapTidieR-0.2.0/REDCapTidieR/R/labelled.R |only REDCapTidieR-0.2.0/REDCapTidieR/R/read_redcap.R |only REDCapTidieR-0.2.0/REDCapTidieR/R/utils.R | 343 + REDCapTidieR-0.2.0/REDCapTidieR/README.md | 74 REDCapTidieR-0.2.0/REDCapTidieR/build/vignette.rds |binary REDCapTidieR-0.2.0/REDCapTidieR/inst/doc/REDCapTidieR.R | 93 REDCapTidieR-0.2.0/REDCapTidieR/inst/doc/REDCapTidieR.Rmd | 225 - REDCapTidieR-0.2.0/REDCapTidieR/inst/doc/REDCapTidieR.html | 1899 ++++++++-- REDCapTidieR-0.2.0/REDCapTidieR/inst/doc/diving_deeper.R |only REDCapTidieR-0.2.0/REDCapTidieR/inst/doc/diving_deeper.Rmd |only REDCapTidieR-0.2.0/REDCapTidieR/inst/doc/diving_deeper.html |only REDCapTidieR-0.2.0/REDCapTidieR/inst/doc/glossary.R |only REDCapTidieR-0.2.0/REDCapTidieR/inst/doc/glossary.Rmd |only REDCapTidieR-0.2.0/REDCapTidieR/inst/doc/glossary.html |only REDCapTidieR-0.2.0/REDCapTidieR/inst/httptest |only REDCapTidieR-0.2.0/REDCapTidieR/inst/misc |only REDCapTidieR-0.2.0/REDCapTidieR/inst/testdata/db_data_classic.RDS |binary REDCapTidieR-0.2.0/REDCapTidieR/inst/testdata/db_data_classic_norepeat.RDS |binary REDCapTidieR-0.2.0/REDCapTidieR/inst/testdata/db_data_long.RDS |binary REDCapTidieR-0.2.0/REDCapTidieR/inst/testdata/db_data_long_noarms.RDS |binary REDCapTidieR-0.2.0/REDCapTidieR/inst/testdata/db_data_long_norepeat.RDS |binary REDCapTidieR-0.2.0/REDCapTidieR/inst/testdata/db_metadata_classic.RDS |binary REDCapTidieR-0.2.0/REDCapTidieR/inst/testdata/db_metadata_classic_norepeat.RDS |binary REDCapTidieR-0.2.0/REDCapTidieR/inst/testdata/db_metadata_long.RDS |binary REDCapTidieR-0.2.0/REDCapTidieR/inst/testdata/db_metadata_long_noarms.RDS |binary REDCapTidieR-0.2.0/REDCapTidieR/inst/testdata/db_metadata_long_norepeat.RDS |binary REDCapTidieR-0.2.0/REDCapTidieR/inst/testdata/linked_arms_long.RDS |binary REDCapTidieR-0.2.0/REDCapTidieR/inst/testdata/linked_arms_long_noarms.RDS |binary REDCapTidieR-0.2.0/REDCapTidieR/inst/testdata/linked_arms_long_norepeat.RDS |binary REDCapTidieR-0.2.0/REDCapTidieR/inst/testdata/redcaptidier_longitudinal_db.RDS |binary REDCapTidieR-0.2.0/REDCapTidieR/man/add_event_mapping.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/add_metadata.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/add_partial_keys.Rd | 9 REDCapTidieR-0.2.0/REDCapTidieR/man/bind_tibbles.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/calc_metadata_stats.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/check_forms_exist.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/check_redcap_populated.Rd | 2 REDCapTidieR-0.2.0/REDCapTidieR/man/check_repeat_and_nonrepeat.Rd | 7 REDCapTidieR-0.2.0/REDCapTidieR/man/check_req_labelled_fields.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/check_req_labelled_metadata_fields.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/clean_redcap.Rd | 2 REDCapTidieR-0.2.0/REDCapTidieR/man/clean_redcap_long.Rd | 4 REDCapTidieR-0.2.0/REDCapTidieR/man/deprecated.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/distill_nonrepeat_table_long.Rd | 5 REDCapTidieR-0.2.0/REDCapTidieR/man/distill_repeat_table_long.Rd | 2 REDCapTidieR-0.2.0/REDCapTidieR/man/extract_tibble.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/extract_tibbles.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/figures/redcaptidier-demo.gif |only REDCapTidieR-0.2.0/REDCapTidieR/man/format-helpers.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/get_fields_to_drop.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/get_record_id_field.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/link_arms.Rd | 10 REDCapTidieR-0.2.0/REDCapTidieR/man/make_labelled.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/parse_labels.Rd | 8 REDCapTidieR-0.2.0/REDCapTidieR/man/read_redcap.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/resolve_formatter.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/strip_html_field_embedding.Rd |only REDCapTidieR-0.2.0/REDCapTidieR/man/update_field_names.Rd | 25 REDCapTidieR-0.2.0/REDCapTidieR/tests/testthat/fixtures |only REDCapTidieR-0.2.0/REDCapTidieR/tests/testthat/helper.R |only REDCapTidieR-0.2.0/REDCapTidieR/tests/testthat/test-bind_tibbles.R |only REDCapTidieR-0.2.0/REDCapTidieR/tests/testthat/test-checks.R | 98 REDCapTidieR-0.2.0/REDCapTidieR/tests/testthat/test-clean_redcap.R | 46 REDCapTidieR-0.2.0/REDCapTidieR/tests/testthat/test-clean_redcap_long.R | 76 REDCapTidieR-0.2.0/REDCapTidieR/tests/testthat/test-deprecated.R |only REDCapTidieR-0.2.0/REDCapTidieR/tests/testthat/test-extract_tibble.R |only REDCapTidieR-0.2.0/REDCapTidieR/tests/testthat/test-labelled.R |only REDCapTidieR-0.2.0/REDCapTidieR/tests/testthat/test-read_redcap.R |only REDCapTidieR-0.2.0/REDCapTidieR/tests/testthat/test-utils.R | 169 REDCapTidieR-0.2.0/REDCapTidieR/vignettes/REDCapTidieR |only REDCapTidieR-0.2.0/REDCapTidieR/vignettes/REDCapTidieR.Rmd | 225 - REDCapTidieR-0.2.0/REDCapTidieR/vignettes/diving_deeper |only REDCapTidieR-0.2.0/REDCapTidieR/vignettes/diving_deeper.Rmd |only REDCapTidieR-0.2.0/REDCapTidieR/vignettes/glossary.Rmd |only REDCapTidieR-0.2.0/REDCapTidieR/vignettes/images |only REDCapTidieR-0.2.0/REDCapTidieR/vignettes/longitudinal_redcap.R |only 108 files changed, 3183 insertions(+), 975 deletions(-)
Title: Tipping Point Analysis for Bayesian Dynamic Borrowing
Description: Tipping point analysis for clinical trials that employ Bayesian dynamic borrowing via robust meta-analytic predictive (MAP) priors. Mainly an implementation of an approach proposed by Best and colleagues (2021) is provided <doi:10.1002/pst.2093>. Further functions facilitate the specification of the robust MAP prior via expert elicitation (using the roulette method) and computation of the posterior distribution of the treatment effect with either fixed or stochastic expert-elicited weights. Intended use is the planning, analysis and interpretation of extrapolation studies in pediatric drug development, but applicability is generally wider.
Author: Morten Dreher [aut],
Christian Stock [aut, cre] ,
Emma Torrini [ctb]
Maintainer: Christian Stock <christian.stock@boehringer-ingelheim.com>
Diff between tipmap versions 0.3.7 dated 2022-10-23 and 0.3.9 dated 2022-12-07
DESCRIPTION | 6 MD5 | 22 NEWS.md | 13 R/get_stochast_weight_posterior.R | 157 +- README.md | 2 build/partial.rdb |binary build/vignette.rds |binary inst/doc/introduction.R | 34 inst/doc/introduction.Rmd | 51 inst/doc/introduction.html | 2100 +++++++++++++++++++++++++++-------- man/get_stochast_weight_posterior.Rd | 68 - vignettes/introduction.Rmd | 51 12 files changed, 1911 insertions(+), 593 deletions(-)
Title: General Resampling Infrastructure
Description: Classes and functions to create and summarize different types
of resampling objects (e.g. bootstrap, cross-validation).
Author: Hannah Frick [aut, cre] ,
Fanny Chow [aut],
Max Kuhn [aut],
Michael Mahoney [aut] ,
Julia Silge [aut] ,
Hadley Wickham [aut],
Posit Software, PBC [cph, fnd]
Maintainer: Hannah Frick <hannah@posit.co>
Diff between rsample versions 1.1.0 dated 2022-08-08 and 1.1.1 dated 2022-12-07
DESCRIPTION | 36 +++-- MD5 | 93 +++++++------- NAMESPACE | 39 ++++++ NEWS.md | 19 ++ R/boot.R | 63 ++++++++- R/clustering.R |only R/compat-vctrs-helpers.R | 3 R/compat-vctrs.R | 100 +++++++++++++++ R/initial_split.R | 31 +++- R/make_groups.R | 220 +++++++++++++++++++++++++++++----- R/mc.R | 41 +++++- R/misc.R | 63 +++++++++ R/printing.R | 19 ++ R/rsample-package.R | 4 R/rsplit.R | 4 R/slide.R | 12 - R/validation_split.R | 16 +- R/vfold.R | 96 +++++++++++++- R/zzz-compat-vctrs-clustering_cv.R |only README.md |only build/vignette.rds |binary inst/doc/Common_Patterns.html | 158 ++++++++++++------------ inst/doc/Working_with_rsets.html | 149 +++++++++++------------ inst/doc/rsample.html | 124 ++++++++++--------- man/clustering_cv.Rd |only man/get_rsplit.Rd |only man/group_bootstraps.Rd | 19 ++ man/group_mc_cv.Rd | 19 ++ man/group_vfold_cv.Rd | 27 ++++ man/initial_split.Rd | 2 man/make_groups.Rd | 13 +- man/rsample-package.Rd | 6 man/validation_split.Rd | 2 tests/testthat/_snaps/boot.md | 61 ++++++++- tests/testthat/_snaps/clustering.md |only tests/testthat/_snaps/compat-vctrs.md | 66 ++++++++++ tests/testthat/_snaps/make_groups.md | 4 tests/testthat/_snaps/mc.md | 17 ++ tests/testthat/_snaps/misc.md | 38 +++++ tests/testthat/_snaps/nesting.md | 38 ++--- tests/testthat/_snaps/permutations.md | 1 tests/testthat/_snaps/validation.md | 10 + tests/testthat/_snaps/vfold.md | 65 +++++++++- tests/testthat/test-boot.R | 44 ++++++ tests/testthat/test-clustering.R |only tests/testthat/test-compat-dplyr.R | 1 tests/testthat/test-initial.R | 26 +++- tests/testthat/test-mc.R | 38 +++++ tests/testthat/test-misc.R | 70 ++++++++++ tests/testthat/test-validation.R | 45 ++++++ tests/testthat/test-vfold.R | 100 +++++++++++++++ 51 files changed, 1596 insertions(+), 406 deletions(-)
Title: Quantile G-Computation
Description: G-computation for a set of time-fixed exposures with
quantile-based basis functions, possibly under linearity and
homogeneity assumptions. This approach estimates a regression line
corresponding to the expected change in the outcome (on the link
basis) given a simultaneous increase in the quantile-based category
for all exposures. Works with continuous, binary, and right-censored
time-to-event outcomes. Reference: Alexander P. Keil, Jessie P.
Buckley, Katie M. OBrien, Kelly K. Ferguson, Shanshan Zhao, and
Alexandra J. White (2019) A quantile-based g-computation approach to
addressing the effects of exposure mixtures; <doi:10.1289/EHP5838>.
Author: Alexander Keil [aut, cre]
Maintainer: Alexander Keil <alex.keil@nih.gov>
Diff between qgcomp versions 2.9.0 dated 2022-10-13 and 2.10.1 dated 2022-12-07
DESCRIPTION | 10 MD5 | 20 NEWS.md | 10 R/base_samplesplits.R | 54 +- README.md | 2 inst/doc/qgcomp-vignette.R | 13 inst/doc/qgcomp-vignette.Rmd | 15 inst/doc/qgcomp-vignette.html | 1011 +++++++++++++----------------------------- man/qgcomp.partials.Rd | 5 tests/test_splits.R | 27 + vignettes/qgcomp-vignette.Rmd | 15 11 files changed, 457 insertions(+), 725 deletions(-)
Title: Multivariate Adaptive Shrinkage
Description: Implements the multivariate adaptive shrinkage (mash)
method of Urbut et al (2019) <DOI:10.1038/s41588-018-0268-8> for
estimating and testing large numbers of effects in many conditions
(or many outcomes). Mash takes an empirical Bayes approach to
testing and effect estimation; it estimates patterns of similarity
among conditions, then exploits these patterns to improve accuracy
of the effect estimates. The core linear algebra is implemented in
C++ for fast model fitting and posterior computation.
Author: Matthew Stephens [aut],
Sarah Urbut [aut],
Gao Wang [aut],
Yuxin Zou [aut],
Yunqi Yang [ctb],
Sam Roweis [cph],
David Hogg [cph],
Jo Bovy [cph],
Peter Carbonetto [aut, cre]
Maintainer: Peter Carbonetto <peter.carbonetto@gmail.com>
Diff between mashr versions 0.2.57 dated 2022-01-25 and 0.2.69 dated 2022-12-07
mashr-0.2.57/mashr/inst/doc/flash_mash.R |only mashr-0.2.57/mashr/inst/doc/flash_mash.Rmd |only mashr-0.2.57/mashr/inst/doc/flash_mash.html |only mashr-0.2.57/mashr/vignettes/flash_mash.Rmd |only mashr-0.2.69/mashr/DESCRIPTION | 14 mashr-0.2.69/mashr/LICENSE | 2 mashr-0.2.69/mashr/MD5 | 56 +-- mashr-0.2.69/mashr/NAMESPACE | 3 mashr-0.2.69/mashr/R/data2cov.R | 189 ++++++---- mashr-0.2.69/mashr/R/est_cor.R | 3 mashr-0.2.69/mashr/R/likelihoods_origdata.R | 2 mashr-0.2.69/mashr/R/mash.R | 28 + mashr-0.2.69/mashr/R/set_data.R | 8 mashr-0.2.69/mashr/README.md | 4 mashr-0.2.69/mashr/build/vignette.rds |binary mashr-0.2.69/mashr/inst/doc/eQTL_outline.Rmd | 2 mashr-0.2.69/mashr/inst/doc/eQTL_outline.html | 186 +++++++--- mashr-0.2.69/mashr/inst/doc/intro_correlations.Rmd | 2 mashr-0.2.69/mashr/inst/doc/intro_correlations.html | 190 ++++++---- mashr-0.2.69/mashr/inst/doc/intro_mash.Rmd | 2 mashr-0.2.69/mashr/inst/doc/intro_mash.html | 247 +++++++++----- mashr-0.2.69/mashr/inst/doc/intro_mash_dd.html | 167 ++++++--- mashr-0.2.69/mashr/inst/doc/intro_mashbaselinemean.html | 177 ++++++---- mashr-0.2.69/mashr/inst/doc/intro_mashcommonbaseline.html | 149 +++++--- mashr-0.2.69/mashr/inst/doc/mash_sampling.html | 131 +++++-- mashr-0.2.69/mashr/inst/doc/simulate_noncanon.html | 105 +++-- mashr-0.2.69/mashr/man/cov_flash.Rd | 40 +- mashr-0.2.69/mashr/man/mash.Rd | 16 mashr-0.2.69/mashr/vignettes/eQTL_outline.Rmd | 2 mashr-0.2.69/mashr/vignettes/intro_correlations.Rmd | 2 mashr-0.2.69/mashr/vignettes/intro_mash.Rmd | 2 31 files changed, 1125 insertions(+), 604 deletions(-)
Title: Less Code, More Results
Description: Each function accomplishes the work of several or more standard R functions. For example, two function calls, Read() and CountAll(), read the data and generate summary statistics for all variables in the data frame, plus histograms and bar charts as appropriate. Other functions provide for comprehensive summary statistics via pivot tables, a comprehensive regression analysis, analysis of variance and t-test, visualizations including the Violin/Box/Scatter plot for a numerical variable, bar chart, histogram, box plot, density curves, calibrated power curve, reading multiple data formats with the same function call, variable labels, color themes, and Trellis graphics. Also includes a confirmatory factor analysis of multiple indicator measurement models, pedagogical routines for data simulation such as for the Central Limit Theorem, generation and rendering of R markdown instructions for interpretative output, and interactive visualizations.
Author: David Gerbing, The School of Business, Portland State University
Maintainer: David W. Gerbing <gerbing@pdx.edu>
Diff between lessR versions 4.2.3 dated 2022-09-11 and 4.2.4 dated 2022-12-07
lessR-4.2.3/lessR/R/traint_test.R |only lessR-4.2.4/lessR/DESCRIPTION | 8 lessR-4.2.4/lessR/MD5 | 121 - lessR-4.2.4/lessR/NEWS.md | 37 lessR-4.2.4/lessR/R/ANOVAz1.R | 2 lessR-4.2.4/lessR/R/Logit.R | 10 lessR-4.2.4/lessR/R/Plot.R | 16 lessR-4.2.4/lessR/R/Read.R | 5 lessR-4.2.4/lessR/R/Regression.R | 219 +- lessR-4.2.4/lessR/R/interact.R | 2 lessR-4.2.4/lessR/R/plt.zbubble.R | 1 lessR-4.2.4/lessR/R/plt.zfit.R | 19 lessR-4.2.4/lessR/R/plt.zlattice.R | 2 lessR-4.2.4/lessR/R/plt.zmain.R | 37 lessR-4.2.4/lessR/R/plt.zmat.R | 4 lessR-4.2.4/lessR/R/plt.ztxt.R | 3 lessR-4.2.4/lessR/R/recode.R | 2 lessR-4.2.4/lessR/R/reg.z1anvBasic.R | 2 lessR-4.2.4/lessR/R/reg.z1bckBasic.R | 2 lessR-4.2.4/lessR/R/reg.z1fitBasic.R | 2 lessR-4.2.4/lessR/R/reg.z1modelBasic.R | 2 lessR-4.2.4/lessR/R/reg.z2Relations.R | 2 lessR-4.2.4/lessR/R/reg.z3resfitResidual.R | 2 lessR-4.2.4/lessR/R/reg.z3txtResidual.R | 21 lessR-4.2.4/lessR/R/reg.z4Pred.R | 2 lessR-4.2.4/lessR/R/reg.z5Plot.R | 30 lessR-4.2.4/lessR/R/reg.zKfold.R | 2 lessR-4.2.4/lessR/R/reg.zRmd.R | 1872 ++++++-------------- lessR-4.2.4/lessR/R/regPlot.R | 7 lessR-4.2.4/lessR/R/train_test.R |only lessR-4.2.4/lessR/R/xAnd.R | 2 lessR-4.2.4/lessR/R/xP.R | 6 lessR-4.2.4/lessR/R/zzz.R | 114 + lessR-4.2.4/lessR/build/vignette.rds |binary lessR-4.2.4/lessR/data/dataEmployee_lbl.rda |binary lessR-4.2.4/lessR/inst/CITATION | 1 lessR-4.2.4/lessR/inst/Rmd |only lessR-4.2.4/lessR/inst/doc/BarChart.html | 132 - lessR-4.2.4/lessR/inst/doc/Customize.html | 136 - lessR-4.2.4/lessR/inst/doc/Extract.html | 146 - lessR-4.2.4/lessR/inst/doc/FactorAnalysis.html | 124 - lessR-4.2.4/lessR/inst/doc/Histogram.html | 128 - lessR-4.2.4/lessR/inst/doc/Means.html | 138 - lessR-4.2.4/lessR/inst/doc/Plot.html | 158 - lessR-4.2.4/lessR/inst/doc/Proportions.html | 124 - lessR-4.2.4/lessR/inst/doc/ReadWrite.html | 124 - lessR-4.2.4/lessR/inst/doc/Regression.html | 166 - lessR-4.2.4/lessR/inst/doc/Time.html | 142 - lessR-4.2.4/lessR/inst/doc/pivot.html | 124 - lessR-4.2.4/lessR/inst/doc/utilities.html | 124 - lessR-4.2.4/lessR/inst/shiny_apps/Histogram/app.R | 39 lessR-4.2.4/lessR/inst/shiny_apps/ScatterPlot/app.R | 46 lessR-4.2.4/lessR/man/Logit.Rd | 4 lessR-4.2.4/lessR/man/Regression.Rd | 50 lessR-4.2.4/lessR/man/dataBodyMeas.Rd | 2 lessR-4.2.4/lessR/man/dataMach4.Rd | 2 lessR-4.2.4/lessR/man/regPlot.Rd | 37 lessR-4.2.4/lessR/man/train_test.Rd | 20 lessR-4.2.4/lessR/man/xP.Rd | 8 59 files changed, 2080 insertions(+), 2451 deletions(-)
Title: Transforms Institutional Data into Text Files for IPEDS
Automated Import/Upload
Description: Starting from user-supplied institutional data, these scripts
transform, aggregate, and reshape the information to produce
key-value pair data files that are able to be uploaded to IPEDS (Integrated Postsecondary Education Data System)
through their submission portal <https://surveys.nces.ed.gov/ipeds/>. Starting data specifications can be found in the vignettes.
Final files are saved locally to a location of the user's choice.
User-friendly readable files can also be produced for purposes of data review and validation.
Author: Alison Lanski [aut, cre],
Shiloh Fling [aut]
Maintainer: Alison Lanski <alanski@nd.edu>
Diff between IPEDSuploadables versions 2.5.5 dated 2022-10-03 and 2.6.5 dated 2022-12-07
DESCRIPTION | 10 +-- MD5 | 58 +++++++++++----------- NAMESPACE | 1 NEWS.md | 6 ++ R/create_dummy_data_gr.R | 5 + R/gr_students.R | 2 R/make_gr_part_E.R |only R/produce_gr_report.R | 29 ++++++++++- R/specs_GR.R | 2 R/zzz.R | 2 README.md | 11 +--- data/gr_students.rda |binary data/part_outputs.rda |binary data/specs_GR.rda |binary inst/doc/howto_overall_ipedsuploadables.Rmd | 2 inst/doc/howto_overall_ipedsuploadables.html | 8 +-- inst/doc/howto_use_autoformat.R | 13 ++++- inst/doc/howto_use_autoformat.Rmd | 17 +++++- inst/doc/howto_use_autoformat.html | 69 +++++++++++++++++++++++++-- inst/doc/setup_for_gr.R | 6 ++ inst/doc/setup_for_gr.Rmd | 9 +++ inst/doc/setup_for_gr.html | 11 ++++ man/create_dummy_data_gr.Rd | 1 man/gr_students.Rd | 2 man/make_gr_part_E.Rd |only man/produce_gr_report.Rd | 5 + man/specs_GR.Rd | 2 tests/testthat/test-part-outputs.R | 2 vignettes/howto_overall_ipedsuploadables.Rmd | 2 vignettes/howto_use_autoformat.Rmd | 17 +++++- vignettes/setup_for_gr.Rmd | 9 +++ 31 files changed, 233 insertions(+), 68 deletions(-)
More information about IPEDSuploadables at CRAN
Permanent link
Title: Cross-Validated Covariance Matrix Estimation
Description: An efficient cross-validated approach for covariance matrix
estimation, particularly useful in high-dimensional settings. This
method relies upon the theory of loss-based estimator selection to
identify the optimal estimator of the covariance matrix from among a
prespecified set of candidates.
Author: Philippe Boileau [aut, cre, cph]
,
Nima Hejazi [aut] ,
Brian Collica [aut] ,
Jamarcus Liu [ctb],
Mark van der Laan [ctb, ths] ,
Sandrine Dudoit [ctb, ths]
Maintainer: Philippe Boileau <philippe_boileau@berkeley.edu>
Diff between cvCovEst versions 1.1.1 dated 2022-09-23 and 1.2.0 dated 2022-12-07
DESCRIPTION | 8 +- MD5 | 35 +++++------ NEWS.md | 9 ++ R/checkArgs.R | 10 --- R/cvCovEst.R | 30 +-------- R/estimators.R | 6 + R/plot_functions.R | 22 ------- README.md | 25 ++++---- build/partial.rdb |binary inst/CITATION |only inst/doc/using_cvCovEst.Rmd | 2 inst/doc/using_cvCovEst.html | 23 ++++--- man/checkArgs.Rd | 8 -- man/cvCovEst.Rd | 21 ++---- man/plot.cvCovEst.Rd | 4 - tests/testthat/test-checkArgs.R | 121 +++++---------------------------------- tests/testthat/test-cvCovEst.R | 82 ++++---------------------- tests/testthat/test-estimators.R | 97 +++++++++++++++++++++++++++++++ vignettes/using_cvCovEst.Rmd | 2 19 files changed, 212 insertions(+), 293 deletions(-)
Title: Inbreeding-Purging Estimation in Pedigreed Populations
Description: Inbreeding-purging analysis of pedigreed populations, including the computation of the inbreeding coefficient, partial, ancestral and purged inbreeding coefficients, and measures of the opportunity of purging related to the individual reduction of inbreeding load.
In addition, functions to calculate the effective population size and other parameters relevant to population genetics are included.
See López-Cortegano E. (2021) <doi:10.1093/bioinformatics/btab599>.
Author: Eugenio Lopez-Cortegano [aut, cre]
Maintainer: Eugenio Lopez-Cortegano <elcortegano@gmail.com>
Diff between purgeR versions 1.6 dated 2022-11-21 and 1.7 dated 2022-12-07
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ NEWS.md | 4 ++++ R/clean.R | 4 ++-- inst/doc/ip.html | 4 ++-- inst/doc/purgeR-tutorial.html | 4 ++-- tests/testthat/test_preprocessing.R | 1 + 7 files changed, 21 insertions(+), 16 deletions(-)
Title: Extinction Simulation in Ecological Networks
Description: Simulates the extinction of species in ecological networks and it analyzes
its cascading effects, described in Dunne et al. (2002) <doi:10.1073/pnas.192407699>.
Author: Derek Corcoran [aut, cre] ,
M. Isidora Ávila-Thieme [aut] ,
Fernanda S. Valdovinos [aut],
Sergio A. Navarrete [aut],
Pablo A. Marquet [aut] ,
Erik Kusch [aut]
Maintainer: Derek Corcoran <derek.corcoran.barrios@gmail.com>
Diff between NetworkExtinction versions 1.0.1 dated 2022-11-22 and 1.0.2 dated 2022-12-07
DESCRIPTION | 11 +- MD5 | 25 +++-- NAMESPACE | 1 R/DataInit.R | 11 +- R/Extintions.R | 19 +--- README.md | 65 +++++++++++++++ inst/doc/NetworkExtinction.html | 168 ++++++++++++++++++++-------------------- man/ExtinctionOrder.Rd | 3 man/RandomExtinctions.Rd | 3 man/SimulateExtinctions.Rd | 3 tests |only 11 files changed, 187 insertions(+), 122 deletions(-)
More information about NetworkExtinction at CRAN
Permanent link
Title: Neat and Painless Statistical Reporting
Description: User-friendly, clear and simple statistics, primarily for
publication in psychological science. The main functions are wrappers for
other packages, but there are various additions as well. Every relevant step
from data aggregation to reportable printed statistics is covered for basic
experimental designs.
Author: Gaspar Lukacs [aut, cre] ,
Bennett Kleinberg [ctb] ,
Johnny van Doorn [ctb]
Maintainer: Gaspar Lukacs <lkcsgaspar@gmail.com>
Diff between neatStats versions 1.11.0 dated 2022-05-06 and 1.13.3 dated 2022-12-07
DESCRIPTION | 10 MD5 | 26 R/aggr_neat.R | 12 R/anova_neat.R | 151 ++- R/corr_neat.R | 506 ++++++------- R/internal.R | 24 R/var_tests.R | 32 build/partial.rdb |binary build/vignette.rds |binary inst/doc/example_pipeline.Rmd | 4 inst/doc/example_pipeline.html | 1568 ++++++++++++++++++++++++++--------------- man/aggr_neat.Rd | 10 man/anova_neat.Rd | 14 vignettes/example_pipeline.Rmd | 4 14 files changed, 1467 insertions(+), 894 deletions(-)
Title: Tools for HTML
Description: Tools for HTML generation and output.
Author: Joe Cheng [aut],
Carson Sievert [aut, cre] ,
Barret Schloerke [aut] ,
Winston Chang [aut] ,
Yihui Xie [aut],
Jeff Allen [aut],
RStudio [cph]
Maintainer: Carson Sievert <carson@rstudio.com>
Diff between htmltools versions 0.5.3 dated 2022-07-18 and 0.5.4 dated 2022-12-07
DESCRIPTION | 19 ++++++++++--------- MD5 | 22 +++++++++++++--------- NAMESPACE | 1 + NEWS.md | 18 ++++++++++++++++-- R/fill.R |only R/html_dependency.R | 4 ++-- R/tag_query.R | 2 +- R/tags.R | 7 ++++++- inst |only man/bindFillRole.Rd |only man/htmlDependency.Rd | 2 +- tests/testthat/test-deps.r | 30 ++++++++++++++++++++++++++++++ tests/testthat/test-fill.R |only tests/testthat/test-tag-query.R | 7 +++++++ 14 files changed, 87 insertions(+), 25 deletions(-)
Title: Dynamic Range Boxes
Description: Improves the concept of multivariate range boxes, which is highly susceptible for outliers and does not consider the distribution of the data. The package uses dynamic range boxes to overcome these problems.
Author: Manuela Schreyer <manuelalarissa.schreyer@sbg.ac.at>,
Wolfgang Trutschnig <Wolfgang.Trutschnig@sbg.ac.at>,
Robert R. Junker <Robert.Junker@sbg.ac.at>,
Jonas Kuppler <Jonas.Kuppler@uni-duesseldorf.de>,
Arne Bathke <Arne.Bathke@sbg.ac.at>,
Judith H. Pa [...truncated...]
Maintainer: Marco Tschimpke <marco.tschimpke@plus.ac.at>
Diff between dynRB versions 0.17 dated 2022-07-06 and 0.18 dated 2022-12-07
DESCRIPTION | 10 MD5 | 6 build/vignette.rds |binary inst/doc/TutorialdynRB.html | 517 ++++++++------------------------------------ 4 files changed, 107 insertions(+), 426 deletions(-)
Title: Dynamic Models for Confidence and Response Time Distributions
Description: Provides density functions for the joint distribution of
choice, response time and confidence for discrete confidence judgments
as well as functions for parameter fitting, prediction and simulation
for various dynamical models of decision confidence. All models are
explained in detail by Hellmann et al. (preprint;
<https://osf.io/9jfqr/>). Implemented models are the dynWEV model,
the 2DSD model (Pleskac & Busemeyer, 2010, <doi:10.1037/a0019737>),
and various race models. C++ code for dynWEV and 2DSD is based on the
'rtdists' package by Henrik Singmann.
Author: Sebastian Hellmann [aut, cre] ,
Manuel Rausch [aut, fnd]
Maintainer: Sebastian Hellmann <sebastian.hellmann@ku.de>
Diff between dynConfiR versions 0.0.1 dated 2022-05-27 and 0.0.2 dated 2022-12-07
dynConfiR-0.0.1/dynConfiR/NEWS |only dynConfiR-0.0.2/dynConfiR/DESCRIPTION | 66 +- dynConfiR-0.0.2/dynConfiR/MD5 | 116 ++--- dynConfiR-0.0.2/dynConfiR/NAMESPACE | 9 dynConfiR-0.0.2/dynConfiR/NEWS.md |only dynConfiR-0.0.2/dynConfiR/R/RaceModels.R | 369 +++++++++++++--- dynConfiR-0.0.2/dynConfiR/R/RcppExports.R | 24 - dynConfiR-0.0.2/dynConfiR/R/d2DSD.R | 101 ++-- dynConfiR-0.0.2/dynConfiR/R/dDDMConf.R |only dynConfiR-0.0.2/dynConfiR/R/dWEV.R | 55 +- dynConfiR-0.0.2/dynConfiR/R/dynConfiR-package.R | 4 dynConfiR-0.0.2/dynConfiR/R/fitRTConf.R | 116 ++--- dynConfiR-0.0.2/dynConfiR/R/fitRTConfModels.R | 45 + dynConfiR-0.0.2/dynConfiR/R/getquantiles.R | 8 dynConfiR-0.0.2/dynConfiR/R/int_fct_pred.R | 4 dynConfiR-0.0.2/dynConfiR/R/int_fill_thresholds.R | 53 ++ dynConfiR-0.0.2/dynConfiR/R/int_fitting_2DSD.R | 125 +++-- dynConfiR-0.0.2/dynConfiR/R/int_fitting_DDMConf.R |only dynConfiR-0.0.2/dynConfiR/R/int_fitting_IRM.R | 24 - dynConfiR-0.0.2/dynConfiR/R/int_fitting_PCRM.R | 22 dynConfiR-0.0.2/dynConfiR/R/int_fitting_dynWEV.R | 132 +++-- dynConfiR-0.0.2/dynConfiR/R/likelihood_RM.R | 20 dynConfiR-0.0.2/dynConfiR/R/likelihoods_WEV.R | 46 + dynConfiR-0.0.2/dynConfiR/R/predictRTConf.R | 51 +- dynConfiR-0.0.2/dynConfiR/R/predictRTConfModels.R | 59 +- dynConfiR-0.0.2/dynConfiR/R/predictratingdist_DDMConf.R |only dynConfiR-0.0.2/dynConfiR/R/predictratingdist_RM.R | 34 - dynConfiR-0.0.2/dynConfiR/R/predictratingdist_WEV.R | 102 ++-- dynConfiR-0.0.2/dynConfiR/R/rLCA.R | 1 dynConfiR-0.0.2/dynConfiR/R/simulateConfModel.R | 6 dynConfiR-0.0.2/dynConfiR/R/simulateRM.R | 59 +- dynConfiR-0.0.2/dynConfiR/R/simulateWEV.R | 312 ++++++------- dynConfiR-0.0.2/dynConfiR/build/vignette.rds |binary dynConfiR-0.0.2/dynConfiR/inst/doc/dynConfiR.html | 143 +++--- dynConfiR-0.0.2/dynConfiR/man/LogLikRM.Rd | 20 dynConfiR-0.0.2/dynConfiR/man/LogLikWEV.Rd | 40 - dynConfiR-0.0.2/dynConfiR/man/PDFtoQuantiles.Rd | 8 dynConfiR-0.0.2/dynConfiR/man/RaceModels.Rd | 101 ++-- dynConfiR-0.0.2/dynConfiR/man/d2DSD.Rd | 49 +- dynConfiR-0.0.2/dynConfiR/man/dDDMConf.Rd |only dynConfiR-0.0.2/dynConfiR/man/dynConfiR-package.Rd | 54 +- dynConfiR-0.0.2/dynConfiR/man/dynWEV.Rd | 36 - dynConfiR-0.0.2/dynConfiR/man/fitRTConf.Rd | 85 +-- dynConfiR-0.0.2/dynConfiR/man/fitRTConfModels.Rd | 36 - dynConfiR-0.0.2/dynConfiR/man/predictDDMConf.Rd |only dynConfiR-0.0.2/dynConfiR/man/predictRM.Rd | 34 - dynConfiR-0.0.2/dynConfiR/man/predictRTConf.Rd | 41 - dynConfiR-0.0.2/dynConfiR/man/predictRTConfModels.Rd | 51 +- dynConfiR-0.0.2/dynConfiR/man/predictWEV.Rd | 66 +- dynConfiR-0.0.2/dynConfiR/man/simulateRM.Rd | 20 dynConfiR-0.0.2/dynConfiR/man/simulateRTConf.Rd | 4 dynConfiR-0.0.2/dynConfiR/man/simulateWEV.Rd | 51 -- dynConfiR-0.0.2/dynConfiR/src/Density_2DSD.h | 70 +-- dynConfiR-0.0.2/dynConfiR/src/Density_DDMConf.h |only dynConfiR-0.0.2/dynConfiR/src/Density_IRM.h | 32 - dynConfiR-0.0.2/dynConfiR/src/Density_IRM2.h |only dynConfiR-0.0.2/dynConfiR/src/Density_IRM21.h |only dynConfiR-0.0.2/dynConfiR/src/Density_IRM3.h |only dynConfiR-0.0.2/dynConfiR/src/Density_PCRM.h | 32 - dynConfiR-0.0.2/dynConfiR/src/Density_WEVmu.h | 38 + dynConfiR-0.0.2/dynConfiR/src/Parameters.h | 48 +- dynConfiR-0.0.2/dynConfiR/src/RNG_WEV.h |only dynConfiR-0.0.2/dynConfiR/src/RcppExports.cpp | 77 ++- dynConfiR-0.0.2/dynConfiR/src/SeqSampConf.cpp | 364 ++++++++++----- dynConfiR-0.0.2/dynConfiR/src/SeqSampConf.h | 13 65 files changed, 2110 insertions(+), 1366 deletions(-)
Title: Providing Fast and Flexible Functions for Distance Correlation
Analysis
Description: Provides methods for distance covariance and distance correlation (Szekely, et al. (2007) <doi:10.1214/009053607000000505>), generalized version thereof (Sejdinovic, et al. (2013) <doi:10.1214/13-AOS1140>) and corresponding tests (Berschneider, Bottcher (2018) <arXiv:1808.07280>. Distance standard deviation methods (Edelmann, et al. (2020) <doi:10.1214/19-AOS1935>) and distance correlation methods for survival endpoints (Edelmann, et al. (2021) <doi:10.1111/biom.13470>) are also included.
Author: Dominic Edelmann [aut, cre],
Jochen Fiedler [aut]
Maintainer: Dominic Edelmann <dominic.edelmann@dkfz-heidelberg.de>
Diff between dcortools versions 0.1.4 dated 2022-12-01 and 0.1.5 dated 2022-12-07
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- NEWS.md | 11 ++++++++++- build/partial.rdb |binary src/RcppExports.cpp | 2 +- src/matrix_vector_operations.cpp | 2 ++ 6 files changed, 21 insertions(+), 10 deletions(-)
Title: Assesses the Quality of Estimates Made by Complex Sample Designs
Description: Assesses the quality of estimates made by complex sample designs,
following the methodology developed by the National Institute of Statistics Chile (2020, <https://www.ine.cl/docs/default-source/institucionalidad/buenas-pr%C3%A1cticas/clasificaciones-y-estandares/est%C3%A1ndar-evaluaci%C3%B3n-de-calidad-de-estimaciones-publicaci%C3%B3n-27022020.pdf>)
and by Economic Commission for Latin America and
Caribbean (2020, <https://repositorio.cepal.org/bitstream/handle/11362/45681/1/S2000293_es.pdf>).
Author: Klaus Lehmann [aut, cre],
Ricardo Pizarro [aut],
Ignacio Agloni [ctb]
Maintainer: Klaus Lehmann <klehmann@fen.uchile.cl>
Diff between calidad versions 0.3.0 dated 2022-10-13 and 0.4.0 dated 2022-12-07
calidad-0.3.0/calidad/man/evaluate.Rd |only calidad-0.4.0/calidad/DESCRIPTION | 8 calidad-0.4.0/calidad/MD5 | 34 - calidad-0.4.0/calidad/NAMESPACE | 2 calidad-0.4.0/calidad/NEWS.md | 6 calidad-0.4.0/calidad/R/create_internal.R | 24 - calidad-0.4.0/calidad/R/evaluate_external.R | 12 calidad-0.4.0/calidad/R/evaluate_internal.R | 8 calidad-0.4.0/calidad/R/report.R | 2 calidad-0.4.0/calidad/inst/doc/tutorial.R | 10 calidad-0.4.0/calidad/inst/doc/tutorial.Rmd | 16 calidad-0.4.0/calidad/inst/doc/tutorial.html | 207 ++++++---- calidad-0.4.0/calidad/man/assess.Rd |only calidad-0.4.0/calidad/man/create_html.Rd | 2 calidad-0.4.0/calidad/man/get_survey_table.Rd | 80 +-- calidad-0.4.0/calidad/man/quadratic.Rd | 2 calidad-0.4.0/calidad/tests/testthat/test-evaluate_external.R | 31 - calidad-0.4.0/calidad/tests/testthat/test-evaluate_internal.R | 14 calidad-0.4.0/calidad/vignettes/tutorial.Rmd | 16 19 files changed, 258 insertions(+), 216 deletions(-)
Title: User-Friendly GUI Plotting Tools
Description: Create a user-friendly plotting GUI for 'R'.
In addition, one purpose of creating the 'R' package is to facilitate third-party software to call 'R' for drawing, for example, 'Phoenix WinNonlin' software calls 'R' to draw the drug concentration versus time curve.
Author: Fu Yongchao [aut, cre, cph]
Maintainer: Fu Yongchao <3212418315@qq.com>
Diff between guiplot versions 0.3.0 dated 2022-11-29 and 0.3.1 dated 2022-12-07
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ NEWS | 13 +++++++++++++ R/guiplotServer.R | 38 ++++++++++++++++++++++++++++---------- R/guiplotUI.R | 35 ++++++++++++++++++++++++++++++----- R/optioncodes.R | 17 ++++++++++++++--- man/colClass_as.Rd | 52 ++++++++++++++++++++++++++-------------------------- 7 files changed, 121 insertions(+), 54 deletions(-)
Title: A Tool to Create HTML Tables
Description: A tool to create and style HTML tables with CSS. These can
be exported and used in any application that accepts HTML (e.g. 'shiny',
'rmarkdown', 'PowerPoint'). It also provides functions to create CSS files
(which also work with shiny).
Author: Theo Boutaris [aut, cre, cph],
Clemens Zauchner [aut],
Dana Jomar [aut]
Maintainer: Theo Boutaris <teoboot2007@hotmail.com>
Diff between tableHTML versions 2.1.0 dated 2021-03-21 and 2.1.1 dated 2022-12-07
DESCRIPTION | 11 -- MD5 | 28 ++--- R/add_css_conditional_column.R | 2 R/make_css_conditional_format.R | 2 R/render_tableHTML_family.R | 42 ++++--- README.md | 2 build/vignette.rds |binary inst/doc/conditional_column.html | 50 +++++---- inst/doc/examples.html | 48 ++++----- inst/doc/make_css.html | 10 + inst/doc/tableHTML.html | 86 ++++++++-------- inst/doc/themes.html | 200 +++++++++++++++++++------------------- man/add_css_conditional_column.Rd | 4 man/render_tableHTML.Rd | 16 --- man/tableHTML_output.Rd | 16 --- 15 files changed, 259 insertions(+), 258 deletions(-)
Title: NHDPlus Tools
Description: Tools for traversing and working with National Hydrography Dataset Plus (NHDPlus) data. All methods implemented in 'nhdplusTools' are available in the NHDPlus documentation available from the US Environmental Protection Agency <https://www.epa.gov/waterdata/basic-information>.
Author: David Blodgett [aut, cre] ,
Mike Johnson [aut] ,
Marc Weber [ctb] ,
Josh Erickson [ctb]
Maintainer: David Blodgett <dblodgett@usgs.gov>
Diff between nhdplusTools versions 0.6.0 dated 2022-11-28 and 0.6.1 dated 2022-12-07
DESCRIPTION | 12 MD5 | 48 - NEWS.md | 6 R/get_paths.R | 1106 ++++++++++++++++++------------------ README.md | 23 inst/doc/US_data.Rmd | 2 inst/doc/US_data.html | 2 inst/doc/advanced_network.html | 2 inst/doc/nhdplusTools.R | 2 inst/doc/nhdplusTools.Rmd | 4 inst/doc/nhdplusTools.html | 4 inst/doc/plot_nhdplus.Rmd | 2 inst/doc/plot_nhdplus.html | 2 inst/extdata/new_hope_data.R | 60 - inst/extdata/nhdplushr_data.R | 68 +- inst/extdata/sample_data.R | 18 inst/extdata/sample_flines.R | 18 inst/extdata/walker_data.R | 42 - tests/testthat/helper.R | 2 tests/testthat/test_01_get_nldi.R | 4 tests/testthat/test_get_nhdplus.R | 6 tests/testthat/test_get_nhdplushr.R | 29 vignettes/US_data.Rmd | 2 vignettes/nhdplusTools.Rmd | 4 vignettes/plot_nhdplus.Rmd | 2 25 files changed, 752 insertions(+), 718 deletions(-)
Title: Distances on Directed Graphs
Description: Distances on dual-weighted directed graphs using
priority-queue shortest paths (Padgham (2019) <doi:10.32866/6945>).
Weighted directed graphs have weights from A to B which may differ
from those from B to A. Dual-weighted directed graphs have two sets
of such weights. A canonical example is a street network to be used
for routing in which routes are calculated by weighting distances
according to the type of way and mode of transport, yet lengths of
routes must be calculated from direct distances.
Author: Mark Padgham [aut, cre],
Andreas Petutschnig [aut],
David Cooley [aut],
Robin Lovelace [ctb],
Andrew Smith [ctb],
Malcolm Morgan [ctb],
Shane Saunders [cph]
Maintainer: Mark Padgham <mark.padgham@email.com>
Diff between dodgr versions 0.2.17 dated 2022-11-04 and 0.2.18 dated 2022-12-07
DESCRIPTION | 6 +- MD5 | 26 ++++----- NEWS.md | 12 ++++ R/cache.R | 24 +++++++- R/from-to-params.R | 12 ---- R/graph-functions.R | 11 +++ R/weight-streetnet-times.R | 48 ++++++++++++---- build/vignette.rds |binary inst/doc/dists-categorical.html | 18 +++--- inst/doc/dodgr.html | 114 +++++++++++++++++++++++----------------- inst/doc/flows.html | 4 - inst/doc/parallel.html | 4 - inst/doc/times.html | 8 +- tests/testthat/test-sc.R | 30 +++++++--- 14 files changed, 198 insertions(+), 119 deletions(-)
Title: Load Census TIGER/Line Shapefiles
Description: Download TIGER/Line shapefiles from the United States Census Bureau
(<https://www.census.gov/geographies/mapping-files/time-series/geo/tiger-line-file.html>)
and load into R as 'sf' objects.
Author: Kyle Walker [aut, cre],
Bob Rudis [ctb]
Maintainer: Kyle Walker <kyle@walker-data.com>
Diff between tigris versions 1.6.1 dated 2022-06-03 and 2.0 dated 2022-12-07
DESCRIPTION | 17 +--- MD5 | 120 ++++++++++++++--------------- NAMESPACE | 3 NEWS | 8 + R/enumeration_units.R | 21 ++--- R/helpers.R | 120 +++++++---------------------- R/landmarks.R | 4 R/legislative.R | 6 - R/metro_areas.R | 10 +- R/national.R | 6 - R/native.R | 10 +- R/places.R | 2 R/pumas.R | 13 ++- R/states.R | 2 R/tigris-package.R | 13 --- R/transportation.R | 10 +- R/utils.R | 31 +++++++ R/water.R | 4 README.md | 77 +++++++++--------- data/fips_codes.rda |binary man/address_ranges.Rd | 5 - man/alaska_native_regional_corporations.Rd | 5 - man/area_water.Rd | 5 - man/block_groups.Rd | 5 - man/blocks.Rd | 5 - man/coastline.Rd | 5 - man/combined_statistical_areas.Rd | 5 - man/congressional_districts.Rd | 5 - man/core_based_statistical_areas.Rd | 5 - man/counties.Rd | 5 - man/county_subdivisions.Rd | 5 - man/divisions.Rd | 5 - man/geo_join.Rd | 7 - man/landmarks.Rd | 5 - man/linear_water.Rd | 5 - man/load_tiger.Rd | 4 man/load_tiger_doc_template.Rd | 5 - man/metro_divisions.Rd | 5 - man/military.Rd | 5 - man/nation.Rd | 5 - man/native_areas.Rd | 5 - man/new_england.Rd | 5 - man/places.Rd | 5 - man/primary_roads.Rd | 5 - man/primary_secondary_roads.Rd | 5 - man/pumas.Rd | 5 - man/rails.Rd | 5 - man/rbind_tigris.Rd | 11 -- man/regions.Rd | 5 - man/roads.Rd | 5 - man/school_districts.Rd | 5 - man/state_legislative_districts.Rd | 5 - man/states.Rd | 5 - man/tigris.Rd | 10 -- man/tracts.Rd | 5 - man/tribal_block_groups.Rd | 5 - man/tribal_census_tracts.Rd | 5 - man/tribal_subdivisions_national.Rd | 5 - man/urban_areas.Rd | 5 - man/voting_districts.Rd | 5 - man/zctas.Rd | 5 - 61 files changed, 351 insertions(+), 343 deletions(-)
Title: Hyperparameter Optimization for 'mlr3'
Description: Hyperparameter optimization package of the mlr3 ecosystem. It
features highly configurable search spaces via the paradox package and
finds optimal hyperparameter configurations for any mlr3 learner.
mlr3tuning works with several optimization algorithms e.g. Random
Search, Iterated Racing, Bayesian Optimization (in mlr3mbo) and
Hyperband (in mlr3hyperband). Moreover, it can automatically optimize
learners and estimate the performance of optimized models with nested
resampling.
Author: Marc Becker [cre, aut] ,
Michel Lang [aut] ,
Jakob Richter [aut] ,
Bernd Bischl [aut] ,
Daniel Schalk [aut]
Maintainer: Marc Becker <marcbecker@posteo.de>
Diff between mlr3tuning versions 0.17.0 dated 2022-11-18 and 0.17.1 dated 2022-12-07
DESCRIPTION | 6 +++--- MD5 | 36 ++++++++++++++++++------------------ NEWS.md | 4 ++++ R/AutoTuner.R | 2 +- R/TuningInstanceSingleCrit.R | 2 +- R/mlr_callbacks.R | 2 +- R/sugar.R | 5 +++-- README.md | 16 ++++++++-------- inst/WORDLIST | 3 ++- man/AutoTuner.Rd | 2 +- man/TuningInstanceMultiCrit.Rd | 2 +- man/TuningInstanceSingleCrit.Rd | 2 +- man/auto_tuner.Rd | 2 +- man/mlr3tuning-package.Rd | 2 +- man/mlr3tuning.early_stopping.Rd | 2 +- man/ti.Rd | 8 ++++++-- man/tune.Rd | 2 +- tests/testthat/test_ti.R | 15 +++++++++++++++ tests/testthat/test_tune.R | 21 +++++++++++++++++++++ 19 files changed, 90 insertions(+), 44 deletions(-)
Title: Access and Analyze eBird Status and Trends Data
Description: Tools to download, load, plot, and analyze eBird Status and
Trends Data Products
(<https://science.ebird.org/en/status-and-trends>). eBird
(<https://ebird.org/home>) is a global database of bird observations
collected by member of the public. eBird Status and Trends uses these
data to model global bird abundances, range boundaries, and habitat
associations at a high spatial and temporal resolution.
Author: Matthew Strimas-Mackey [aut, cre]
,
Shawn Ligocki [aut],
Tom Auer [aut] ,
Daniel Fink [aut] ,
Cornell Lab of Ornithology [cph]
Maintainer: Matthew Strimas-Mackey <mes335@cornell.edu>
Diff between ebirdst versions 1.2021.0 dated 2022-11-09 and 1.2021.1 dated 2022-12-07
DESCRIPTION | 6 - MD5 | 20 +++--- NEWS.md | 10 ++- R/ebirdst-ppms.R | 62 ++++++++++++++----- R/load.R | 19 ++--- data/ebirdst_runs.rda |binary inst/doc/ebirdst.html | 130 ++++++++++++++++++++-------------------- inst/doc/product-changelog.html | 14 ++-- inst/doc/rasters.html | 130 ++++++++++++++++++++-------------------- man/binom_test_p.Rd | 7 -- man/ebirdst_ppms.Rd | 8 +- 11 files changed, 230 insertions(+), 176 deletions(-)
Title: Distance-Based Statistics
Description: Prediction methods where explanatory information is coded as a matrix of distances between individuals. Distances can either be directly input as a distances matrix, a squared distances matrix, an inner-products matrix or computed from observed predictors.
Author: Boj, Eva <evaboj@ub.edu>, Caballe, Adria <adria.caballe@irb.barcelona.org>, Delicado, Pedro <pedro.delicado@upc.edu> and Fortiana, Josep <fortiana@ub.edu>.
Maintainer: Eva Boj <evaboj@ub.edu>
Diff between dbstats versions 2.0.0 dated 2022-08-07 and 2.0.1 dated 2022-12-07
DESCRIPTION | 10 +++++----- MD5 | 14 +++++++------- NEWS | 5 +++++ man/dbglm.Rd | 3 +++ man/dblm.Rd | 3 +++ man/dbstats-package.Rd | 8 ++++++-- man/ldbglm.Rd | 3 +++ man/ldblm.Rd | 3 +++ 8 files changed, 35 insertions(+), 14 deletions(-)
Title: A Comprehensive Set of Functions to Clean, Analyze, and Present
Crime Data
Description: A collection of functions that make it easier to understand crime (or other)
data, and assist others in understanding it. The package helps you read data
from various sources, clean it, fix column names, and graph the data.
Author: Jacob Kaplan [aut, cre]
Maintainer: Jacob Kaplan <jkkaplan6@gmail.com>
Diff between crimeutils versions 0.3.0 dated 2021-02-03 and 0.5.1 dated 2022-12-07
DESCRIPTION | 14 +-- MD5 | 19 ++-- NAMESPACE | 1 NEWS.md | 15 +++ R/cleaning_utils.R | 21 +++- R/latex.R | 124 +++++++++++++++++++++------- R/tables.R | 93 ++++++++++++++++++++- README.md | 2 man/make_latex_tables.Rd | 9 +- man/make_mean_median_mode_table_by_group.Rd |only tests/testthat/test-cleaning-utils.R | 15 +++ 11 files changed, 260 insertions(+), 53 deletions(-)
Title: Mining Frequent Sequences
Description: Add-on for arules to handle and mine frequent sequences.
Provides interfaces to the C++ implementation of cSPADE by
Mohammed J. Zaki.
Author: Christian Buchta and Michael Hahsler, with contributions from
Daniel Diaz
Maintainer: Christian Buchta <christian.buchta@wu.ac.at>
Diff between arulesSequences versions 0.2-26 dated 2022-10-03 and 0.2-27 dated 2022-12-07
CHANGELOG | 3 ++ DESCRIPTION | 6 ++--- MD5 | 24 ++++++++++----------- data/zaki.rda |binary src/makebin.c | 7 +++--- src/ptree.c | 8 +++---- tests/arules.Rout.save | 15 +++++++++---- tests/idlists.Rout.save | 20 +++++++++++++---- tests/makebin.Rout.save | 15 +++++++++---- tests/native.Rout.save | 15 +++++++++---- tests/ptree.Rout.save | 44 ++++++++++++++++++++++---------------- tests/similarity.Rout.save | 15 +++++++++---- tests/zaki.Rout.save | 51 ++++++++++++++++++++++++++++++--------------- 13 files changed, 145 insertions(+), 78 deletions(-)
More information about arulesSequences at CRAN
Permanent link
Title: Landscape Visualizations in R and 'Unity'
Description: Functions for the retrieval, manipulation, and visualization
of 'geospatial' data, with an aim towards producing '3D' landscape
visualizations in the 'Unity' '3D' rendering engine. Functions are
also provided for retrieving elevation data and base map tiles from
the 'USGS' National Map <https://apps.nationalmap.gov/services/>.
Author: Michael Mahoney [aut, cre] ,
Mike Johnson [rev] for rOpenSci,
see <https://github.com/ropensci/software-review/issues/416>),
Sydney Foks [rev] for rOpenSci,
see <https://github.com/ropensci/software-review/issues/416>)
Maintainer: Michael Mahoney <mike.mahoney.218@gmail.com>
Diff between terrainr versions 0.7.1 dated 2022-08-11 and 0.7.2 dated 2022-12-07
DESCRIPTION | 15 ++-- MD5 | 26 +++---- NEWS.md | 13 +++ R/geom_spatial_rgb.R | 1 R/get_tiles.R | 4 - R/hit_api.R | 12 ++- README.md | 70 ++++++++++---------- build/vignette.rds |binary inst/doc/overview.html | 111 +++++++++++++++----------------- inst/doc/unity_instructions.html | 111 +++++++++++++++----------------- man/geom_spatial_rgb.Rd | 24 ++++-- man/get_tiles.Rd | 4 - tests/testthat/test-vector_to_overlay.R | 4 - tests/testthat/testdata/govunits.png |binary 14 files changed, 211 insertions(+), 184 deletions(-)
Title: Optimum Block Length
Description: Obtain optimum block from Non-overlapping Block Bootstrap method.
Author: Daniel James [cre, aut],
Ayinde Kayode [aut]
Maintainer: Daniel James <futathesis@gmail.com>
Diff between OBL versions 0.2.0 dated 2022-08-09 and 0.2.1 dated 2022-12-07
OBL-0.2.0/OBL/vignettes/economia.bib.sav.tmp |only OBL-0.2.1/OBL/DESCRIPTION | 6 - OBL-0.2.1/OBL/MD5 | 11 -- OBL-0.2.1/OBL/NEWS.md | 5 OBL-0.2.1/OBL/R/blockplot.R | 3 OBL-0.2.1/OBL/build/vignette.rds |binary OBL-0.2.1/OBL/inst/doc/OBL.html | 142 ++++++++++++++------------- 7 files changed, 90 insertions(+), 77 deletions(-)
Title: Search Spaces for 'mlr3'
Description: Collection of search spaces for hyperparameter optimization in the
mlr3 ecosystem. It features ready-to-use search spaces for many popular
machine learning algorithms. The search spaces are from scientific articles
and work for a wide range of data sets.
Author: Marc Becker [cre, aut] ,
Michel Lang [ctb]
Maintainer: Marc Becker <marcbecker@posteo.de>
Diff between mlr3tuningspaces versions 0.3.2 dated 2022-11-27 and 0.3.3 dated 2022-12-07
DESCRIPTION | 16 ++++++++-------- MD5 | 20 ++++++++++---------- NEWS.md | 7 ++++++- R/TuningSpace.R | 2 +- R/sugar.R | 5 ++++- README.md | 7 +++++-- inst/WORDLIST | 1 - man/lts.Rd | 4 +++- man/mlr3tuningspaces-package.Rd | 4 ++-- tests/testthat/test_TuningSpace.R | 12 ++++++++++++ tests/testthat/test_as_search_space.R | 11 +++++++++++ 11 files changed, 62 insertions(+), 27 deletions(-)
More information about mlr3tuningspaces at CRAN
Permanent link
Title: A Centralized Metadata Object Focus on Clinical Trial Data
Programming Workflows
Description: Create an immutable container holding metadata for the purpose of better enabling programming activities and functionality of other packages within the clinical programming workflow.
Author: Christina Fillmore [aut, cre] ,
Maya Gans [aut] ,
Ashley Tarasiewicz [aut],
Mike Stackhouse [aut] ,
GSK/Atorus JPT [cph, fnd]
Maintainer: Christina Fillmore <christina.e.fillmore@gsk.com>
Diff between metacore versions 0.1.0 dated 2022-10-04 and 0.1.1 dated 2022-12-07
DESCRIPTION | 6 +- MD5 | 25 ++++++---- NAMESPACE | 6 ++ NEWS.md | 5 ++ R/checks.R |only R/spec_builder.R | 2 R/validators.R | 16 ++++++ R/xml_builders.R | 25 ++++++---- R/zzz.R | 4 + inst/doc/Building_Specification_Readers.html | 66 +++++++++++++-------------- man/checks.Rd |only man/is_metacore.Rd |only tests/testthat/spec_no_val.xlsx |only tests/testthat/test-checks.R |only tests/testthat/test-reader.R | 9 +++ tests/testthat/test-validators.R | 10 ++++ 16 files changed, 118 insertions(+), 56 deletions(-)
More information about DependencyReviewer at CRAN
Permanent link
Title: Oncology Extension Package for ADaM in 'R' Asset Library
Description: Programming oncology specific Clinical Data Interchange Standards Consortium
(CDISC) compliant Analysis Data Model (ADaM) datasets in 'R'. ADaM datasets are a
mandatory part of any New Drug or Biologics License Application submitted to the
United States Food and Drug Administration (FDA). Analysis derivations are
implemented in accordance with the "Analysis Data Model Implementation Guide"
(CDISC Analysis Data Model Team (2021), <https://www.cdisc.org/standards/foundational/adam/adamig-v1-3-release-package>).
The package is an extension package of the 'admiral' package.
Author: Stefan Bundfuss [aut, cre],
Ross Farrugia [aut],
Amit Jain [aut],
Andrew Smith [aut],
Teckla Akinyi [aut],
Samia Kabi [aut],
Stephen Gormley [aut],
Hinal Patel [aut],
Karl Kennedy [ctb],
Matt Marino [ctb],
Gopi Vegesna [ctb],
Thomas Neitmann [ctb],
A [...truncated...]
Maintainer: Stefan Bundfuss <stefan.bundfuss@roche.com>
Diff between admiralonco versions 0.1.0 dated 2022-09-13 and 0.2.0 dated 2022-12-07
admiralonco-0.1.0/admiralonco/R/tte_source.R |only admiralonco-0.1.0/admiralonco/tests/testthat/test-derive_param_lasta.R |only admiralonco-0.2.0/admiralonco/DESCRIPTION | 30 admiralonco-0.2.0/admiralonco/MD5 | 93 - admiralonco-0.2.0/admiralonco/NAMESPACE | 9 admiralonco-0.2.0/admiralonco/NEWS.md | 19 admiralonco-0.2.0/admiralonco/R/admiralonco-package.R | 9 admiralonco-0.2.0/admiralonco/R/admiralonco_environment.R |only admiralonco-0.2.0/admiralonco/R/check_crpr.R | 6 admiralonco-0.2.0/admiralonco/R/derive_param_bor.R | 5 admiralonco-0.2.0/admiralonco/R/derive_param_clinbenefit.R | 4 admiralonco-0.2.0/admiralonco/R/derive_param_confirmed_bor.R | 3 admiralonco-0.2.0/admiralonco/R/derive_param_confirmed_resp.R | 3 admiralonco-0.2.0/admiralonco/R/derive_param_lasta.R | 195 -- admiralonco-0.2.0/admiralonco/R/derive_param_response.R | 10 admiralonco-0.2.0/admiralonco/R/filter_pd.R | 2 admiralonco-0.2.0/admiralonco/R/tte_sources.R |only admiralonco-0.2.0/admiralonco/README.md | 21 admiralonco-0.2.0/admiralonco/build/vignette.rds |binary admiralonco-0.2.0/admiralonco/inst/WORDLIST | 3 admiralonco-0.2.0/admiralonco/inst/doc/admiralonco.R | 27 admiralonco-0.2.0/admiralonco/inst/doc/admiralonco.Rmd | 29 admiralonco-0.2.0/admiralonco/inst/doc/admiralonco.html | 13 admiralonco-0.2.0/admiralonco/inst/doc/adrs.R | 93 + admiralonco-0.2.0/admiralonco/inst/doc/adrs.Rmd | 419 ++++-- admiralonco-0.2.0/admiralonco/inst/doc/adrs.html | 658 +++++----- admiralonco-0.2.0/admiralonco/inst/doc/adtte.R | 27 admiralonco-0.2.0/admiralonco/inst/doc/adtte.Rmd | 33 admiralonco-0.2.0/admiralonco/inst/doc/adtte.html | 19 admiralonco-0.2.0/admiralonco/inst/templates/ad_adrs.R | 41 admiralonco-0.2.0/admiralonco/inst/templates/ad_adtte.R | 2 admiralonco-0.2.0/admiralonco/man/admiralonco-package.Rd | 3 admiralonco-0.2.0/admiralonco/man/derive_param_bor.Rd | 3 admiralonco-0.2.0/admiralonco/man/derive_param_clinbenefit.Rd | 3 admiralonco-0.2.0/admiralonco/man/derive_param_confirmed_bor.Rd | 3 admiralonco-0.2.0/admiralonco/man/derive_param_confirmed_resp.Rd | 3 admiralonco-0.2.0/admiralonco/man/derive_param_lasta.Rd | 82 - admiralonco-0.2.0/admiralonco/man/derive_param_response.Rd | 7 admiralonco-0.2.0/admiralonco/man/figures/lifecycle-archived.svg |only admiralonco-0.2.0/admiralonco/man/figures/lifecycle-defunct.svg |only admiralonco-0.2.0/admiralonco/man/figures/lifecycle-deprecated.svg |only admiralonco-0.2.0/admiralonco/man/figures/lifecycle-experimental.svg |only admiralonco-0.2.0/admiralonco/man/figures/lifecycle-maturing.svg |only admiralonco-0.2.0/admiralonco/man/figures/lifecycle-questioning.svg |only admiralonco-0.2.0/admiralonco/man/figures/lifecycle-stable.svg |only admiralonco-0.2.0/admiralonco/man/figures/lifecycle-superseded.svg |only admiralonco-0.2.0/admiralonco/man/filter_pd.Rd | 2 admiralonco-0.2.0/admiralonco/man/signal_crpr.Rd | 2 admiralonco-0.2.0/admiralonco/man/tte_source_objects.Rd | 2 admiralonco-0.2.0/admiralonco/tests/testthat/test-deprecation.R |only admiralonco-0.2.0/admiralonco/tests/testthat/test-derive_param_response.R | 5 admiralonco-0.2.0/admiralonco/vignettes/admiralonco.Rmd | 29 admiralonco-0.2.0/admiralonco/vignettes/adrs.Rmd | 419 ++++-- admiralonco-0.2.0/admiralonco/vignettes/adtte.Rmd | 33 54 files changed, 1423 insertions(+), 946 deletions(-)
Title: Pipeline Tools Inspired by 'GNU Make'
Description: A suite of tools for transforming an existing workflow into a
self-documenting pipeline with very minimal upfront costs. Segments of
the pipeline are specified in much the same way a 'Make' rule is, by
declaring an executable recipe (which might be an R script), along
with the corresponding targets and dependencies. When the entire
pipeline is run through, only those recipes that need to be executed
will be. Meanwhile, execution metadata is captured behind the scenes
for later inspection.
Author: Kinto Behr [aut, cre, cph]
Maintainer: Kinto Behr <kinto.behr@gmail.com>
Diff between makepipe versions 0.2.0 dated 2022-05-13 and 0.2.1 dated 2022-12-07
DESCRIPTION | 12 MD5 | 56 +- NAMESPACE | 8 NEWS.md | 31 + R/Pipeline.R | 106 ++++- R/Segment.R | 106 +++-- R/make.R | 2 R/make_with_dir.R |only R/params.R | 2 R/utils.R | 2 README.md | 67 +++ inst/doc/makepipe.Rmd | 42 ++ inst/doc/makepipe.html | 329 +++++++++++---- inst/tests/Segment |only inst/tests/make_with_dir_ok |only inst/tests/make_with_dir_warn |only man/Pipeline.Rd | 107 +++-- man/Segment.Rd | 50 +- man/SegmentRecipe.Rd | 56 -- man/SegmentSource.Rd | 56 -- man/make_params.Rd | 4 man/make_with_dir.Rd |only man/make_with_recipe.Rd | 1 man/make_with_source.Rd | 1 man/pipeline-vis.Rd | 4 tests/testthat/_snaps/Pipeline/pipeline_png |binary tests/testthat/test-Pipeline.R | 576 ++++++++++++++-------------- tests/testthat/test-Segment.R |only tests/testthat/test-make_with_dir.R |only vignettes/makepipe.Rmd | 42 ++ 30 files changed, 1053 insertions(+), 607 deletions(-)
Title: Clustering for Business Analytics
Description: Implements clustering techniques such as Proximus and Rock, utility functions for efficient computation of cross distances and data manipulation.
Author: Christian Buchta and Michael Hahsler
Maintainer: Christian Buchta <christian.buchta@wu.ac.at>
Diff between cba versions 0.2-22 dated 2022-11-07 and 0.2-23 dated 2022-12-07
CHANGELOG | 6 +++++- DESCRIPTION | 6 +++--- MD5 | 10 +++++----- src/ccfkms.c | 5 +++-- src/cluster.c | 7 ++++--- src/rock.c | 5 +++-- 6 files changed, 23 insertions(+), 16 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-08-05 0.7.0
2022-02-14 0.6.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-09-16 1.0.9
2022-08-10 1.0.8
2021-12-08 1.0.7