Title: WHOIS Server Querying
Description: Queries data from WHOIS servers.
Author: Brad Cable
Maintainer: Brad Cable <brad@bcable.net>
Diff between Rwhois versions 1.0.12 dated 2022-07-13 and 1.0.14 dated 2023-05-24
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- R/functions.R | 4 +++- README.md | 9 +++------ man/Rwhois.Rd | 7 ++----- 5 files changed, 16 insertions(+), 20 deletions(-)
Title: Empirical Bayesian Lasso and Elastic Net Methods for Generalized
Linear Models
Description: Provides empirical Bayesian lasso and elastic net algorithms for variable selection and effect estimation. Key features include sparse variable selection and effect estimation via generalized linear regression models, high dimensionality with p>>n, and significance test for nonzero effects. This package outperforms other popular methods such as lasso and elastic net methods in terms of power of detection, false discovery rate, and power of detecting grouping effects. Please reference its use as A Huang and D Liu (2016) <doi: 10.1093/bioinformatics/btw143>.
Author: Anhui Huang, Dianting Liu
Maintainer: Anhui Huang <anhuihuang@gmail.com>
Diff between EBglmnet versions 5.3 dated 2023-05-13 and 6.0 dated 2023-05-24
DESCRIPTION | 6 +++--- MD5 | 18 +++++++++--------- R/CVonePair.R | 2 +- inst/doc/EBglmnet_intro.Rmd | 8 ++++---- man/EBglmnet-package.Rd | 9 +++++++-- man/EBglmnet.Rd | 14 +++++++++----- src/elasticNetLinear.c | 6 +++--- src/fEBBinaryNEG.c | 2 +- src/fEBLinearNEG.c | 2 +- vignettes/EBglmnet_intro.Rmd | 8 ++++---- 10 files changed, 42 insertions(+), 33 deletions(-)
Title: Interactive Tutorials for R
Description: Create interactive tutorials using R Markdown. Use a
combination of narrative, figures, videos, exercises, and quizzes to
create self-paced tutorials for learning about R and R packages.
Author: Garrick Aden-Buie [aut, cre] ,
Barret Schloerke [aut] ,
JJ Allaire [aut, ccp],
Alexander Rossell Hayes [aut] ,
Nischal Shrestha [ctb] ,
Angela Li [ctb] ,
Posit, PBC [cph, fnd],
Ajax.org B.V. [ctb, cph] ,
Zeno Rocha [ctb, cph] ,
Nick Payne [ctb, cph] [...truncated...]
Maintainer: Garrick Aden-Buie <garrick@posit.co>
Diff between learnr versions 0.11.3 dated 2023-03-15 and 0.11.4 dated 2023-05-24
learnr-0.11.3/learnr/tests/testthat/tutorials/hint-copy/hint-copy.html |only learnr-0.11.3/learnr/tests/testthat/tutorials/hint-div/hint-div.html |only learnr-0.11.3/learnr/tests/testthat/tutorials/hint-next/hint-next.html |only learnr-0.11.4/learnr/DESCRIPTION | 22 ++-- learnr-0.11.4/learnr/MD5 | 39 +++---- learnr-0.11.4/learnr/NAMESPACE | 1 learnr-0.11.4/learnr/NEWS.md | 6 + learnr-0.11.4/learnr/R/evaluators.R | 5 learnr-0.11.4/learnr/R/question_checkbox.R | 3 learnr-0.11.4/learnr/R/question_numeric.R | 2 learnr-0.11.4/learnr/R/question_radio.R | 2 learnr-0.11.4/learnr/R/question_text.R | 2 learnr-0.11.4/learnr/R/quiz.R | 19 ++- learnr-0.11.4/learnr/build/vignette.rds |binary learnr-0.11.4/learnr/inst/tutorials/ex-data-mutate/ex-data-mutate.Rmd | 2 learnr-0.11.4/learnr/man/question_checkbox.Rd | 5 learnr-0.11.4/learnr/man/quiz.Rd | 10 + learnr-0.11.4/learnr/tests/testthat/test-evaluators.R | 53 ++++------ learnr-0.11.4/learnr/tests/testthat/test-exercise.R | 16 +-- learnr-0.11.4/learnr/tests/testthat/test-question_checkbox.R | 31 +++++ learnr-0.11.4/learnr/tests/testthat/test-question_numeric.R | 10 - learnr-0.11.4/learnr/tests/testthat/test-quiz.R | 39 +++++++ 22 files changed, 179 insertions(+), 88 deletions(-)
Title: Explore the Innards of 'ggplot2' Objects
Description: Extensions to 'ggplot2' providing low-level debug tools: statistics
and geometries echoing their data argument. Layer manipulation: deletion,
insertion, extraction and reordering of layers. Deletion of unused variables
from the data object embedded in "ggplot" objects.
Author: Pedro J. Aphalo [aut, cre]
Maintainer: Pedro J. Aphalo <pedro.aphalo@helsinki.fi>
Diff between gginnards versions 0.1.1 dated 2022-10-15 and 0.1.2 dated 2023-05-24
DESCRIPTION | 10 +- MD5 | 22 ++-- NEWS.md | 4 R/data-manip.R | 2 README.md | 20 ++-- build/vignette.rds |binary inst/doc/user-guide-1.html | 22 ++-- inst/doc/user-guide-2.html | 142 ++++++++++++++++--------------- man/figures/README-unnamed-chunk-4-1.png |binary man/figures/README-unnamed-chunk-5-1.png |binary man/figures/README-unnamed-chunk-6-1.png |binary man/figures/README-unnamed-chunk-6-2.png |binary 12 files changed, 119 insertions(+), 103 deletions(-)
Title: T Loux Doing R: Functions to Simplify Data Analysis and
Reporting
Description: Gives a number of functions to aid common data
analysis processes and reporting statistical results in an 'RMarkdown' file.
Data analysis functions combine multiple base R functions used to describe
simple bivariate relationships into a single, easy to use function.
Reporting functions will return character strings to report p-values,
confidence intervals, and hypothesis test and regression results. Strings
will be LaTeX-formatted as necessary and will knit pretty in an 'RMarkdown'
document. The package also provides a wrapper for the CreateTableOne()
function in the 'tableone' package to make the results knit-able.
Author: Travis Loux [aut, cre]
Maintainer: Travis Loux <travis.loux@slu.edu>
Diff between tldr versions 0.2.3 dated 2021-07-28 and 0.3.0 dated 2023-05-24
DESCRIPTION | 8 ++--- MD5 | 8 ++--- R/KreateTableOne.R | 49 ++++++++++++++++++++++-------------- man/KreateTableOne.Rd | 36 ++++++++++++++------------ man/cutp.Rd | 68 +++++++++++++++++++++++++------------------------- 5 files changed, 92 insertions(+), 77 deletions(-)
Title: Non-Invasive Pretty Printing of R Code
Description: Pretty-prints R code without changing the user's formatting
intent.
Author: Kirill Mueller [aut] ,
Lorenz Walthert [cre, aut],
Indrajeet Patil [ctb]
Maintainer: Lorenz Walthert <lorenz.walthert@icloud.com>
Diff between styler versions 1.9.1 dated 2023-03-04 and 1.10.0 dated 2023-05-24
styler-1.10.0/styler/DESCRIPTION | 10 styler-1.10.0/styler/MD5 | 127 ++++---- styler-1.10.0/styler/NAMESPACE | 3 styler-1.10.0/styler/NEWS.md | 25 + styler-1.10.0/styler/R/addins.R | 4 styler-1.10.0/styler/R/compat-dplyr.R | 37 -- styler-1.10.0/styler/R/compat-tidyr.R | 8 styler-1.10.0/styler/R/detect-alignment-utils.R | 8 styler-1.10.0/styler/R/detect-alignment.R | 7 styler-1.10.0/styler/R/environments.R | 8 styler-1.10.0/styler/R/indent.R | 2 styler-1.10.0/styler/R/io.R | 4 styler-1.10.0/styler/R/nest.R | 78 ++--- styler-1.10.0/styler/R/parse.R | 11 styler-1.10.0/styler/R/reindent.R | 6 styler-1.10.0/styler/R/relevel.R | 150 ---------- styler-1.10.0/styler/R/roxygen-examples-parse.R | 10 styler-1.10.0/styler/R/roxygen-examples.R | 10 styler-1.10.0/styler/R/rules-indention.R | 2 styler-1.10.0/styler/R/rules-line-breaks.R | 2 styler-1.10.0/styler/R/rules-tokens.R | 17 - styler-1.10.0/styler/R/style-guides.R | 4 styler-1.10.0/styler/R/styler-package.R | 14 styler-1.10.0/styler/R/stylerignore.R | 15 - styler-1.10.0/styler/R/token-create.R | 2 styler-1.10.0/styler/R/transform-block.R | 4 styler-1.10.0/styler/R/transform-files.R | 6 styler-1.10.0/styler/R/unindent.R | 6 styler-1.10.0/styler/R/utils-navigate-nest.R | 4 styler-1.10.0/styler/R/utils.R | 2 styler-1.10.0/styler/R/visit.R | 23 + styler-1.10.0/styler/R/zzz.R | 43 ++ styler-1.10.0/styler/inst/doc/customizing_styler.html | 42 +- styler-1.10.0/styler/inst/doc/remove_rules.html | 2 styler-1.10.0/styler/man/combine_children.Rd | 4 styler-1.10.0/styler/man/delete_if_cache_directory.Rd |only styler-1.10.0/styler/tests/testthat/_snaps/public_api-1.md |only styler-1.10.0/styler/tests/testthat/_snaps/public_api-3.md |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/01-one-function-example-last-proper-run-in.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/01-one-function-example-last-proper-run-out.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/02-one-function-examples-last-proper-run-in.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/02-one-function-examples-last-proper-run-out.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/03-one-function-example-not-last-proper-run-in.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/03-one-function-example-not-last-proper-run-out.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/04-one-function-examples-not-last-proper-run-in.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/04-one-function-examples-not-last-proper-run-out.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/05-multiple-function-examples-last-proper-run-in.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/05-multiple-function-examples-last-proper-run-out.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/06-multiple-function-examples-no-last-run-in.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/06-multiple-function-examples-no-last-run-out.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/07-roxygen-no-dontrun-in.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/07-roxygen-no-dontrun-out.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/08-roxygen-dontrun-in.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/08-roxygen-dontrun-out.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/09-styler-r-ui-style-string-multiple-in.R |only styler-1.10.0/styler/tests/testthat/roxygen-examples-complete/09-styler-r-ui-style-string-multiple-out.R |only styler-1.10.0/styler/tests/testthat/test-create_token.R | 6 styler-1.10.0/styler/tests/testthat/test-public_api-0.R |only styler-1.10.0/styler/tests/testthat/test-public_api-1.R |only styler-1.10.0/styler/tests/testthat/test-public_api-2.R |only styler-1.10.0/styler/tests/testthat/test-public_api-3.R |only styler-1.10.0/styler/tests/testthat/test-roxygen-examples-complete.R | 18 - styler-1.10.0/styler/tests/testthat/test-transformers-drop.R | 5 styler-1.10.0/styler/tests/testthat/test-zzz.R | 15 + styler-1.10.0/styler/tests/testthat/tests-cache-require-serial.R | 6 styler-1.9.1/styler/man/add_line_col_to_wrapped_expr.Rd |only styler-1.9.1/styler/man/find_block_id.Rd |only styler-1.9.1/styler/man/relocate_eq_assign.Rd |only styler-1.9.1/styler/man/relocate_eq_assign_nest.Rd |only styler-1.9.1/styler/man/relocate_eq_assign_one.Rd |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/1-one-function-example-last-proper-run-in.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/1-one-function-example-last-proper-run-out.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/2-one-function-examples-last-proper-run-in.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/2-one-function-examples-last-proper-run-out.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/3-one-function-example-not-last-proper-run-in.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/3-one-function-example-not-last-proper-run-out.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/4-one-function-examples-not-last-proper-run-in.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/4-one-function-examples-not-last-proper-run-out.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/5-multiple-function-examples-last-proper-run-in.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/5-multiple-function-examples-last-proper-run-out.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/6-multiple-function-examples-no-last-run-in.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/6-multiple-function-examples-no-last-run-out.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/7-roxygen-no-dontrun-in.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/7-roxygen-no-dontrun-out.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/8-roxygen-dontrun-in.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/8-roxygen-dontrun-out.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/9-styler-r-ui-style-string-multiple-in.R |only styler-1.9.1/styler/tests/testthat/roxygen-examples-complete/9-styler-r-ui-style-string-multiple-out.R |only styler-1.9.1/styler/tests/testthat/test-public_api.R |only 89 files changed, 332 insertions(+), 418 deletions(-)
Title: Common R Scripts and Utilities Used by the Statnet Project
Software
Description: Non-statistical utilities used by the software developed by the Statnet Project. They may also be of use to others.
Author: Pavel N. Krivitsky [aut, cre] ,
Skye Bender-deMoll [ctb],
Chad Klumb [ctb]
Maintainer: Pavel N. Krivitsky <pavel@statnet.org>
Diff between statnet.common versions 4.8.0 dated 2023-01-24 and 4.9.0 dated 2023-05-24
DESCRIPTION | 12 +++---- MD5 | 29 ++++++++++------- NAMESPACE | 14 ++++++++ NEWS | 21 ++++++++++++ NEWS.md | 11 ++++++ R/control.utilities.R | 2 - R/logspace.utils.R | 79 ++++++++++++++++++++++++++++++----------------- R/matrix.utils.R |only R/misc.utilities.R | 7 +--- build/stage23.rdb |only build/statnet.common.pdf |binary inst/CITATION | 8 ++-- man/is.SPD.Rd |only man/logspace.utils.Rd | 54 ++++++++++++++++++++------------ man/ssolve.Rd |only man/xTAx.Rd |only src/init.c | 2 + src/logspace_utils.c | 52 +++++++++++++++++++++++++++--- 18 files changed, 210 insertions(+), 81 deletions(-)
More information about statnet.common at CRAN
Permanent link
Title: Interface to Geometry Engine - Open Source ('GEOS')
Description: Interface to Geometry Engine - Open Source ('GEOS') using the C 'API' for topology operations on geometries. Please note that 'rgeos' will be retired during October 2023, plan transition to 'sf' or 'terra' functions using 'GEOS' at your earliest convenience (see <https://r-spatial.org/r/2023/05/15/evolution4.html> and earlier blogs for guidance). The 'GEOS' library is external to the package, and, when installing the package from source, must be correctly installed first. Windows and Mac Intel OS X binaries are provided on 'CRAN'. ('rgeos' >= 0.5-1): Up to and including 'GEOS' 3.7.1, topological operations succeeded with some invalid geometries for which the same operations fail from and including 'GEOS' 3.7.2. The 'checkValidity=' argument defaults and structure have been changed, from default FALSE to integer default '0L' for 'GEOS' < 3.7.2 (no check), '1L' 'GEOS' >= 3.7.2 (check and warn). A value of '2L' is also provided that may be used, assigned globally using 'set [...truncated...]
Author: Roger Bivand [cre, aut] ,
Colin Rundel [aut],
Edzer Pebesma [ctb],
Rainer Stuetz [ctb],
Karl Ove Hufthammer [ctb],
Patrick Giraudoux [ctb],
Martin Davis [cph, ctb],
Sandro Santilli [cph, ctb]
Maintainer: Roger Bivand <Roger.Bivand@nhh.no>
Diff between rgeos versions 0.6-2 dated 2023-03-02 and 0.6-3 dated 2023-05-24
DESCRIPTION | 10 +++++----- MD5 | 14 +++++++------- NEWS.md | 8 ++++++-- R/AAA.R | 20 ++++++++++---------- configure | 18 +++++++++--------- inst/SVN_VERSION | 2 +- man/experimental-functions.Rd | 5 ----- man/rgeos-deprecated.Rd | 11 ----------- 8 files changed, 38 insertions(+), 50 deletions(-)
Title: Gaussian Graphs Models Selection
Description: Graph estimation in Gaussian Graphical Models, following the method
developed by C. Giraud, S. Huet and N. Verzelen (2012) <doi:10.1515/1544-6115.1625>.
The main functions return the adjacency matrix of an undirected graph
estimated from a data matrix.
Author: Annie Bouvier, Christophe Giraud, Sylvie Huet, Verzelen N.
Maintainer: Benjamin Auder <benjamin.auder@universite-paris-saclay.fr>
Diff between GGMselect versions 0.1-12.5 dated 2022-05-01 and 0.1-12.6 dated 2023-05-24
GGMselect-0.1-12.5/GGMselect/NEWS |only GGMselect-0.1-12.6/GGMselect/DESCRIPTION | 10 +++++----- GGMselect-0.1-12.6/GGMselect/MD5 | 7 +++---- GGMselect-0.1-12.6/GGMselect/inst/CITATION | 8 ++++---- GGMselect-0.1-12.6/GGMselect/inst/doc/Notice.pdf |binary 5 files changed, 12 insertions(+), 13 deletions(-)
Title: Pull Data from an 'ArcGIS REST' API
Description: Functions to efficiently query 'ArcGIS REST' APIs
<https://developers.arcgis.com/rest/>.
Both spatial and SQL queries can be used to retrieve data.
Simple Feature (sf) objects are utilized to perform spatial queries.
This package was neither produced nor is maintained by Esri.
Author: Paul Frater [aut, cre] ,
Zac Driscoll [aut]
Maintainer: Paul Frater <paul.frater@wisconsin.gov>
Diff between arcpullr versions 0.2.7 dated 2022-08-30 and 0.2.8 dated 2023-05-24
DESCRIPTION | 14 +-- MD5 | 49 +++++++------ NAMESPACE | 8 ++ R/data.R | 20 +++++ R/imports.R | 6 + R/retrieve_layers.R | 145 +++++++++++++++++++++++++++++++++------- R/retrieve_layers_by_geometry.R | 7 - R/url_objects.R | 11 ++- R/utilities.R | 5 - inst/doc/intro_to_arcpullr.html | 99 ++++++++++++--------------- inst/doc/raster_layers.R | 2 inst/doc/raster_layers.Rmd | 3 inst/doc/raster_layers.html | 98 ++++++++++++--------------- inst/doc/spatial_queries.R | 2 inst/doc/spatial_queries.Rmd | 3 inst/doc/spatial_queries.html | 116 ++++++++++++++------------------ man/example_urls.Rd |only man/get_image_layer.Rd | 133 ++++++++++++++++++------------------ man/get_layer_info.Rd |only man/get_layers_by_spatial.Rd | 123 ++++++++++++++++----------------- man/get_map_layer.Rd | 141 +++++++++++++++++++------------------- man/get_raster_layer.Rd | 117 ++++++++++++++++---------------- man/get_spatial_layer.Rd | 127 +++++++++++++++++------------------ man/get_table_layer.Rd |only man/sql_where.Rd | 65 ++++++++--------- vignettes/raster_layers.Rmd | 3 vignettes/spatial_queries.Rmd | 3 27 files changed, 709 insertions(+), 591 deletions(-)
Title: Scatter Pie Plot
Description: Creates scatterpie plots, especially useful for plotting pies on a map.
Author: Guangchuang Yu [aut, cre]
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Diff between scatterpie versions 0.1.9 dated 2023-04-21 and 0.2.0 dated 2023-05-24
DESCRIPTION | 8 +-- MD5 | 8 +-- NEWS.md | 4 + build/vignette.rds |binary inst/doc/scatterpie.html | 107 ++++++++++++++++++++++++----------------------- 5 files changed, 67 insertions(+), 60 deletions(-)
Title: Single-Case Data Analyses for Single and Multiple Baseline
Designs
Description: A collection of procedures for analysing, visualising,
and managing single-case data. These include piecewise linear regression
models, multilevel models, overlap indices ('PND', 'PEM', 'PAND', 'PET', 'tau-u',
'baseline corrected tau', 'CDC'), and randomization tests. Data preparation functions
support outlier detection, handling missing values, scaling, truncation,
rank transformation, and smoothing. An export function helps to generate
html and latex tables in a publication friendly style. More details can be
found in the online book 'Analyzing single-case data with R and scan', Juergen Wilbert (2013)
<https://jazznbass.github.io/scan-Book/>.
Author: Juergen Wilbert [cre, aut] ,
Timo Lueke [aut]
Maintainer: Juergen Wilbert <juergen.wilbert@uni-potsdam.de>
Diff between scan versions 0.57 dated 2023-02-24 and 0.58 dated 2023-05-24
scan-0.57/scan/R/private_keep_phases.R |only scan-0.57/scan/R/private_names.R |only scan-0.57/scan/R/ranks.R |only scan-0.57/scan/R/shift.R |only scan-0.57/scan/R/show.R |only scan-0.57/scan/R/smooth_cases.R |only scan-0.57/scan/R/standardize.R |only scan-0.57/scan/R/truncate_phase.R |only scan-0.57/scan/data/scan-Data.RData |only scan-0.57/scan/man/Beretvas2008.Rd |only scan-0.57/scan/man/show.Rd |only scan-0.58/scan/DESCRIPTION | 23 - scan-0.58/scan/MD5 | 301 +++++++++++++----------- scan-0.58/scan/NAMESPACE | 3 scan-0.58/scan/NEWS.md | 28 +- scan-0.58/scan/R/add_l2.R | 7 scan-0.58/scan/R/as.data.frame.scdf.R | 2 scan-0.58/scan/R/as_scdf.R | 30 +- scan-0.58/scan/R/autocorr.R | 25 - scan-0.58/scan/R/batch_apply.R |only scan-0.58/scan/R/cdc.R | 161 +++++++----- scan-0.58/scan/R/coefficents.sc_plm.R | 2 scan-0.58/scan/R/convert.R | 228 ++++++++++-------- scan-0.58/scan/R/corrected_tau.R | 63 ++--- scan-0.58/scan/R/deprec-ranks.R |only scan-0.58/scan/R/deprec-shift.R |only scan-0.58/scan/R/deprec-smooth_cases.R |only scan-0.58/scan/R/deprec-standardize.R |only scan-0.58/scan/R/deprec-truncate_phase.R |only scan-0.58/scan/R/deprecated.R | 20 + scan-0.58/scan/R/describe.R | 34 +- scan-0.58/scan/R/design.R | 207 ++++++++-------- scan-0.58/scan/R/estimate_design.R | 74 ++--- scan-0.58/scan/R/export.sc_hplm.R | 2 scan-0.58/scan/R/export.sc_overlap.R | 17 - scan-0.58/scan/R/export.sc_plm.R | 2 scan-0.58/scan/R/export.scdf.R | 10 scan-0.58/scan/R/fill_missing.R | 39 +-- scan-0.58/scan/R/hplm.R | 59 ++-- scan-0.58/scan/R/inherit_roxygen_descriptions.R | 35 +- scan-0.58/scan/R/mplm.R | 80 +++--- scan-0.58/scan/R/nap.R | 90 +++---- scan-0.58/scan/R/outlier.R | 35 +- scan-0.58/scan/R/overlap.R | 75 ++--- scan-0.58/scan/R/pand.R | 74 ++--- scan-0.58/scan/R/pem.R | 14 - scan-0.58/scan/R/pet.R | 14 - scan-0.58/scan/R/pkg-package.R | 9 scan-0.58/scan/R/plm.R | 119 ++++----- scan-0.58/scan/R/plm_contrasts.R | 6 scan-0.58/scan/R/plot.scdf.R | 73 +++-- scan-0.58/scan/R/pnd.R | 12 scan-0.58/scan/R/power_test.R | 98 ++++--- scan-0.58/scan/R/print.sc.R | 12 scan-0.58/scan/R/print.sc_mplm.R | 23 + scan-0.58/scan/R/print.sc_nap.R | 8 scan-0.58/scan/R/print.sc_overlap.R | 10 scan-0.58/scan/R/print.sc_plm.R | 26 +- scan-0.58/scan/R/print.scdf.R | 4 scan-0.58/scan/R/private_check.R | 96 +++++-- scan-0.58/scan/R/private_check_scdf.R | 10 scan-0.58/scan/R/private_mc_function.R | 6 scan-0.58/scan/R/private_options.R | 31 +- scan-0.58/scan/R/private_prepare_scdf.R | 10 scan-0.58/scan/R/private_recombine_phases.R |only scan-0.58/scan/R/private_regression.R | 6 scan-0.58/scan/R/private_utilities.R | 18 - scan-0.58/scan/R/rand_test.R | 14 - scan-0.58/scan/R/random_scdf.R | 8 scan-0.58/scan/R/rci.R | 60 ++-- scan-0.58/scan/R/sample_names.R | 8 scan-0.58/scan/R/scan-Data.R | 72 +---- scan-0.58/scan/R/scan.R | 2 scan-0.58/scan/R/scdf-functions.R | 46 +-- scan-0.58/scan/R/scdf.R | 93 +++---- scan-0.58/scan/R/scdf_attr.R | 33 ++ scan-0.58/scan/R/select_phases.R | 20 - scan-0.58/scan/R/set_vars.R | 12 scan-0.58/scan/R/shinyscan.R |only scan-0.58/scan/R/smd.R | 57 ++-- scan-0.58/scan/R/style_plot.R | 104 ++++---- scan-0.58/scan/R/subset.scdf.R | 23 + scan-0.58/scan/R/summary.scdf.R | 10 scan-0.58/scan/R/sysdata.rda |only scan-0.58/scan/R/tau_u.R | 14 - scan-0.58/scan/R/trend.R | 31 +- scan-0.58/scan/R/write_scdf.R | 9 scan-0.58/scan/README.md | 10 scan-0.58/scan/data/Beretvas2008.rda |only scan-0.58/scan/data/Borckardt2014.rda |only scan-0.58/scan/data/Grosche2011.rda |only scan-0.58/scan/data/Grosche2014.rda |only scan-0.58/scan/data/GruenkeWilbert2014.rda |only scan-0.58/scan/data/Huber2014.rda |only scan-0.58/scan/data/Huitema2000.rda |only scan-0.58/scan/data/Leidig2018.rda |only scan-0.58/scan/data/Leidig2018_l2.rda |only scan-0.58/scan/data/Lenz2013.rda |only scan-0.58/scan/data/Parker2011.rda |only scan-0.58/scan/data/SSDforR2017.rda |only scan-0.58/scan/data/Waddell2011.rda |only scan-0.58/scan/data/byHeart2011.rda |only scan-0.58/scan/data/exampleA1B1A2B2.rda |only scan-0.58/scan/data/exampleA1B1A2B2_zvt.rda |only scan-0.58/scan/data/exampleAB.rda |only scan-0.58/scan/data/exampleABAB.rda |only scan-0.58/scan/data/exampleABC.rda |only scan-0.58/scan/data/exampleABC_150.rda |only scan-0.58/scan/data/exampleABC_outlier.rda |only scan-0.58/scan/data/exampleAB_50.l2.rda |only scan-0.58/scan/data/exampleAB_50.rda |only scan-0.58/scan/data/exampleAB_add.rda |only scan-0.58/scan/data/exampleAB_decreasing.rda |only scan-0.58/scan/data/exampleAB_mpd.rda |only scan-0.58/scan/data/exampleAB_score.rda |only scan-0.58/scan/data/exampleAB_simple.rda |only scan-0.58/scan/data/example_A24.rda |only scan-0.58/scan/inst/CITATION | 2 scan-0.58/scan/inst/shiny |only scan-0.58/scan/man/add_l2.Rd | 9 scan-0.58/scan/man/as.data.frame.scdf.Rd | 2 scan-0.58/scan/man/as_scdf.Rd | 12 scan-0.58/scan/man/autocorr.Rd | 13 - scan-0.58/scan/man/batch_apply.Rd |only scan-0.58/scan/man/cdc.Rd | 57 ++-- scan-0.58/scan/man/coef.sc_plm.Rd | 4 scan-0.58/scan/man/combine.Rd | 19 + scan-0.58/scan/man/convert.Rd | 25 + scan-0.58/scan/man/corrected_tau.Rd | 58 +--- scan-0.58/scan/man/deprecated-functions.Rd | 17 - scan-0.58/scan/man/describe.Rd | 16 - scan-0.58/scan/man/design.Rd | 157 +++++------- scan-0.58/scan/man/dot-inheritParams.Rd | 24 - scan-0.58/scan/man/estimate_design.Rd | 52 ++-- scan-0.58/scan/man/example_data.Rd |only scan-0.58/scan/man/fill_missing.Rd | 29 +- scan-0.58/scan/man/hplm.Rd | 36 +- scan-0.58/scan/man/mplm.Rd | 32 +- scan-0.58/scan/man/nap.Rd | 27 +- scan-0.58/scan/man/outlier.Rd | 24 - scan-0.58/scan/man/overlap.Rd | 33 +- scan-0.58/scan/man/pand.Rd | 57 ++-- scan-0.58/scan/man/pem.Rd | 15 - scan-0.58/scan/man/pet.Rd | 17 - scan-0.58/scan/man/plm.Rd | 61 ++-- scan-0.58/scan/man/plot.scdf.Rd | 57 ++-- scan-0.58/scan/man/plot_rand.Rd | 2 scan-0.58/scan/man/pnd.Rd | 17 - scan-0.58/scan/man/power_test.Rd | 32 +- scan-0.58/scan/man/print.sc.Rd | 9 scan-0.58/scan/man/print.scdf.Rd | 4 scan-0.58/scan/man/rand_test.Rd | 13 - scan-0.58/scan/man/random_scdf.Rd | 6 scan-0.58/scan/man/ranks.Rd | 12 scan-0.58/scan/man/rci.Rd | 26 -- scan-0.58/scan/man/read_scdf.Rd | 4 scan-0.58/scan/man/scan-package.Rd | 3 scan-0.58/scan/man/scdf.Rd | 55 +--- scan-0.58/scan/man/scdf_attr.Rd | 13 - scan-0.58/scan/man/select_cases.Rd | 4 scan-0.58/scan/man/select_phases.Rd | 14 - scan-0.58/scan/man/set_vars.Rd | 4 scan-0.58/scan/man/shift.Rd | 10 scan-0.58/scan/man/shinyscan.Rd |only scan-0.58/scan/man/smd.Rd | 34 +- scan-0.58/scan/man/smooth_cases.Rd | 16 - scan-0.58/scan/man/standardize.Rd | 10 scan-0.58/scan/man/style_plot.Rd | 80 +++--- scan-0.58/scan/man/subset.scdf.Rd | 13 - scan-0.58/scan/man/tau_u.Rd | 69 ++--- scan-0.58/scan/man/transform.scdf.Rd | 2 scan-0.58/scan/man/trend.Rd | 20 - scan-0.58/scan/man/truncate_phase.Rd | 10 scan-0.58/scan/man/write_scdf.Rd | 9 scan-0.58/scan/tests/testthat/test-as_scdf.R |only scan-0.58/scan/tests/testthat/test-autocorr.R |only scan-0.58/scan/tests/testthat/test-cdc.R |only scan-0.58/scan/tests/testthat/test-convert.R |only scan-0.58/scan/tests/testthat/test-corrected.R |only scan-0.58/scan/tests/testthat/test-describe.R |only 180 files changed, 2275 insertions(+), 2028 deletions(-)
Title: Access the 'Strava' API
Description: Functions to access data from the 'Strava v3 API' <https://developers.strava.com/>.
Author: Marcus W. Beck [cre],
Pedro Villarroel [aut],
Daniel Padfield [aut],
Lorenzo Gaborini [aut],
Niklas von Maltzahn [aut]
Maintainer: Marcus W. Beck <mbafs2012@gmail.com>
Diff between rStrava versions 1.1.4 dated 2021-10-27 and 1.2.0 dated 2023-05-24
DESCRIPTION | 15 +++++++-------- MD5 | 32 ++++++++++++++++++-------------- R/compile_activities.R | 13 +++++++++---- R/compile_activity_streams.R | 4 ++-- R/get_activity_streams.R | 5 +++-- R/get_heat_map.R | 8 ++++---- R/get_streams.R | 14 +++++++++----- man/figures/unnamed-chunk-13-1.png |binary man/figures/unnamed-chunk-14-1.png |binary man/figures/unnamed-chunk-14-2.png |binary man/figures/unnamed-chunk-15-1.png |binary man/figures/unnamed-chunk-15-2.png |only man/figures/unnamed-chunk-16-1.png |only man/figures/unnamed-chunk-18-1.png |binary man/figures/unnamed-chunk-19-1.png |only man/figures/unnamed-chunk-19-2.png |only man/get_activity_streams.Rd | 2 +- man/get_heat_map.Rd | 4 ++-- man/get_streams.Rd | 4 ++-- 19 files changed, 57 insertions(+), 44 deletions(-)
Title: Spatiotemporal Resampling Methods for 'mlr3'
Description: Extends the mlr3 ML framework with spatio-temporal resampling
methods to account for the presence of spatiotemporal autocorrelation
(STAC) in predictor variables. STAC may cause highly biased
performance estimates in cross-validation if ignored.
Author: Patrick Schratz [aut, cre] ,
Marc Becker [aut] ,
Jannes Muenchow [ctb] ,
Michel Lang [ctb]
Maintainer: Patrick Schratz <patrick.schratz@gmail.com>
Diff between mlr3spatiotempcv versions 2.0.3 dated 2022-11-18 and 2.1.0 dated 2023-05-24
mlr3spatiotempcv-2.0.3/mlr3spatiotempcv/R/ResamplingRepeatedSptCVCluto.R |only mlr3spatiotempcv-2.0.3/mlr3spatiotempcv/R/ResamplingSptCVCluto.R |only mlr3spatiotempcv-2.0.3/mlr3spatiotempcv/man/autoplot.ResamplingSptCVCluto.Rd |only mlr3spatiotempcv-2.0.3/mlr3spatiotempcv/man/mlr_resamplings_repeated_sptcv_cluto.Rd |only mlr3spatiotempcv-2.0.3/mlr3spatiotempcv/man/mlr_resamplings_sptcv_cluto.Rd |only mlr3spatiotempcv-2.0.3/mlr3spatiotempcv/tests/testthat/setup-cluto.R |only mlr3spatiotempcv-2.0.3/mlr3spatiotempcv/tests/testthat/test-ResamplingRepeatedSptCVCluto.R |only mlr3spatiotempcv-2.0.3/mlr3spatiotempcv/tests/testthat/test-ResamplingSptCVCluto.R |only mlr3spatiotempcv-2.0.3/mlr3spatiotempcv/tests/testthat/test-autoplot_cluto.R |only mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/DESCRIPTION | 17 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/MD5 | 215 +- mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/NAMESPACE | 7 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/NEWS.md | 11 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/R/ResamplingRepeatedSpCVBlock.R | 48 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/R/ResamplingRepeatedSpCVEnv.R | 2 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/R/ResamplingSpCVBlock.R | 43 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/R/ResamplingSpCVBuffer.R | 27 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/R/ResamplingSpCVEnv.R | 2 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/R/autoplot.R | 130 - mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/R/autoplot_spcv_cstf.R | 1 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/R/helper.R | 41 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/R/zzz.R | 10 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/README.md | 2 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/build/partial.rdb |binary mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/build/vignette.rds |binary mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/inst/doc/mlr3spatiotempcv.Rmd | 4 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/inst/doc/mlr3spatiotempcv.html | 127 - mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/inst/doc/spatiotemp-viz.Rmd | 2 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/inst/doc/spatiotemp-viz.html | 81 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/man/autoplot.ResamplingCV.Rd | 1 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/man/autoplot.ResamplingCustomCV.Rd | 1 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/man/autoplot.ResamplingSpCVBlock.Rd | 1 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/man/autoplot.ResamplingSpCVBuffer.Rd | 1 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/man/autoplot.ResamplingSpCVCoords.Rd | 1 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/man/autoplot.ResamplingSpCVDisc.Rd | 1 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/man/autoplot.ResamplingSpCVEnv.Rd | 1 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/man/autoplot.ResamplingSpCVTiles.Rd | 1 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/man/autoplot.ResamplingSptCVCstf.Rd | 1 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/man/mlr_resamplings_repeated_spcv_block.Rd | 61 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/man/mlr_resamplings_repeated_spcv_env.Rd | 6 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/man/mlr_resamplings_spcv_block.Rd | 61 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/man/mlr_resamplings_spcv_buffer.Rd | 52 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/man/mlr_resamplings_spcv_env.Rd | 6 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/tests/testthat/_snaps/1-autoplot/autoplot-show-blocks-true-show-labels-true.svg | 408 ++-- mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/tests/testthat/_snaps/1-autoplot/custom-cv-fold-1-2-sample-fold-n.svg | 64 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/tests/testthat/_snaps/1-autoplot/custom-cv-fold-1-2.svg | 658 +++---- mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/tests/testthat/_snaps/1-autoplot/custom-cv-fold-1-sample-fold-n.svg | 28 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/tests/testthat/_snaps/1-autoplot/custom-cv-fold-1.svg | 328 +-- mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/tests/testthat/_snaps/1-autoplot/cv-fold-1-2-groups-col-role.svg | 838 +++++----- mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/tests/testthat/_snaps/1-autoplot/cv-fold-1-2-sample-fold-n.svg | 70 mlr3spatiotempcv-2.1.0/mlr3spatiotempcv/tests/testthat/_snaps/1-autoplot/cv-fold-1-2.svg | 88 - 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More information about mlr3spatiotempcv at CRAN
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Title: Descriptive Analysis by Groups
Description: Create data summaries for quality control, extensive reports for exploring data, as well as publication-ready univariate or bivariate tables in several formats (plain text, HTML,LaTeX, PDF, Word or Excel. Create figures to quickly visualise the distribution of your data (boxplots, barplots, normality-plots, etc.). Display statistics (mean, median, frequencies, incidences, etc.). Perform the appropriate tests (t-test, Analysis of variance, Kruskal-Wallis, Fisher, log-rank, ...) depending on the nature of the described variable (normal, non-normal or qualitative). Summarize genetic data (Single Nucleotide Polymorphisms) data displaying Allele Frequencies and performing Hardy-Weinberg Equilibrium tests among other typical statistics and tests for these kind of data.
Author: Isaac Subirana [aut, cre] ,
Joan Salvador [ctb]
Maintainer: Isaac Subirana <isubirana@imim.es>
Diff between compareGroups versions 4.6.0 dated 2022-11-18 and 4.7.0 dated 2023-05-24
DESCRIPTION | 10 ++-- MD5 | 29 ++++++------ NAMESPACE | 17 ------- NEWS.md | 8 +++ R/export2md.R | 1 R/export2mdcbind.R | 9 ++- R/update.formula2.R | 4 - build/vignette.rds |binary inst/CITATION | 4 - inst/app/rsconnect/shinyapps.io/isubirana/compareGroups.dcf | 6 +- inst/app/rsconnect/shinyapps.io/regicor |only inst/app/server.R | 19 +++++++ inst/app/ui.R | 7 ++ inst/doc/compareGroups_vignette.html | 18 +++++-- man/compareGroups-internal.Rd | 6 +- man/compareGroups-package.Rd | 2 16 files changed, 81 insertions(+), 59 deletions(-)
Title: Bayesian Network Meta-Analysis of Individual and Aggregate Data
Description: Network meta-analysis and network meta-regression models for
aggregate data, individual patient data, and mixtures of both individual
and aggregate data using multilevel network meta-regression as described by
Phillippo et al. (2020) <doi:10.1111/rssa.12579>. Models are estimated in a
Bayesian framework using 'Stan'.
Author: David M. Phillippo [aut, cre]
Maintainer: David M. Phillippo <david.phillippo@bristol.ac.uk>
Diff between multinma versions 0.5.0 dated 2022-08-29 and 0.5.1 dated 2023-05-24
DESCRIPTION | 14 MD5 | 117 - NAMESPACE | 292 +-- NEWS.md | 6 R/integration.R | 22 R/nma.R | 14 R/nma_data-class.R | 11 R/nma_data.R | 2 R/nma_dic-class.R | 40 R/nma_summary-class.R | 46 R/nodesplit_summary-class.R | 16 R/predict.R | 41 R/relative_effects.R | 2 R/stan_nma-class.R | 61 README.md | 6 build/partial.rdb |binary build/vignette.rds |binary inst/CITATION | 4 inst/REFERENCES.bib | 10 inst/doc/example_atrial_fibrillation.html | 1693 +++++++++++-------- inst/doc/example_bcg_vaccine.html | 594 ++++-- inst/doc/example_blocker.html | 492 ++++- inst/doc/example_diabetes.html | 868 ++++++--- inst/doc/example_dietary_fat.html | 517 ++++- inst/doc/example_hta_psoriasis.html | 818 ++++++--- inst/doc/example_parkinsons.html | 1126 ++++++++---- inst/doc/example_plaque_psoriasis.html | 523 ++--- inst/doc/example_smoking.html | 714 +++++--- inst/doc/example_statins.html | 507 ++++- inst/doc/example_thrombolytics.html | 943 ++++++---- inst/doc/example_transfusion.html | 546 ++++-- inst/doc/vignette_overview.html | 34 inst/stan/include/transformed_parameters_common.stan | 16 inst/stan/ordered_multinomial.stan | 2 man/dic.Rd | 112 - man/log_t.Rd | 90 - man/nma.Rd | 676 +++---- man/nma_data-class.Rd | 124 - man/nma_dic-class.Rd | 50 man/nma_summary-class.Rd | 90 - man/plot.nma_data.Rd | 190 +- man/plot.nma_dic.Rd | 234 +- man/plot.nma_summary.Rd | 220 +- man/plot_integration_error.Rd | 120 - man/predict.stan_nma.Rd | 386 ++-- man/print.nma_data.Rd | 44 man/priors.Rd | 190 +- man/set_ipd.Rd | 188 +- man/stan_nma-class.Rd | 72 src/Makevars.win | 4 src/stanExports_binomial_1par.h | 508 ++--- src/stanExports_binomial_2par.h | 554 +++--- src/stanExports_normal.h | 462 ++--- src/stanExports_ordered_multinomial.h | 704 ++++--- src/stanExports_poisson.h | 430 ++-- tests/testthat.R | 8 tests/testthat/helper.R |only tests/testthat/test-example_parkinsons.R | 8 tests/testthat/test-example_plaque_psoriasis.R | 4 tests/testthat/test-example_transfusion.R | 32 60 files changed, 9398 insertions(+), 6199 deletions(-)
Title: Access Data from the Public Security Institute of the State of
Rio De Janeiro
Description: Allows access to data from the Rio de Janeiro Public Security Institute (ISP), such as criminal statistics, data on gun seizures and femicide. The package also contains the spatial data of Pacifying Police Units (UPPs) and Integrated Public Safety Regions, Areas and Circumscriptions.
Author: Igor Laltuf [aut, cre] ,
Instituto de Seguranca Publica [aut, cph]
Maintainer: Igor Laltuf <igorlaltuf@gmail.com>
Diff between ispdata versions 1.1 dated 2023-02-10 and 1.1.2 dated 2023-05-24
DESCRIPTION | 8 +- MD5 | 73 +++++++++---------- R/bicycle_theft.R | 25 +++++- R/car_fleet.R | 26 +++++- R/crimes_against_life.R | 53 +++++++++++--- R/gun_seizure.R | 25 +++++- R/gun_seizure_historical.R | 27 ++++++- R/monthly_stats.R | 46 +++++++++--- R/monthly_stats_dictionary.R | 75 ++++++++++++-------- R/population.R | 93 ++++++++++++++++++------- R/spatial_info.R | 25 +++++- R/upp_data.R | 57 +++++++++++---- R/yearly_stats.R | 38 +++++++--- R/yearly_stats_dictionary.R | 75 ++++++++++++-------- README.md | 19 ++--- man/bicycle_theft.Rd | 2 man/car_fleet.Rd | 2 man/crimes_against_life.Rd | 2 man/figures/README-unnamed-chunk-2-1.png |binary man/figures/logo.png |only man/gun_seizure_historical.Rd | 2 man/monthly_stats_dictionary.Rd | 2 man/population.Rd | 2 man/spatial_info.Rd | 2 man/upp_data.Rd | 2 man/yearly_stats.Rd | 2 man/yearly_stats_dictionary.Rd | 2 tests/testthat/test-bicycle_theft.R | 4 - tests/testthat/test-car_fleet.R | 3 tests/testthat/test-crimes_against_life.R | 3 tests/testthat/test-gun_seizure.R | 3 tests/testthat/test-gun_seizure_historical.R | 3 tests/testthat/test-monthly_stats.R | 3 tests/testthat/test-monthly_stats_dictionary.R | 3 tests/testthat/test-population.R | 3 tests/testthat/test-upp_data.R | 3 tests/testthat/test-yearly_stats.R | 3 tests/testthat/test-yearly_stats_dictionary.R | 6 - 38 files changed, 507 insertions(+), 215 deletions(-)
Title: Filter Noisy Data
Description: Noise filter based on determining the proportion of neighboring points. A false point will be rejected if it has only few neighbors, but accepted if the proportion of neighbors in a rectangular frame is high. The size of the rectangular frame as well as the cut-off value, i.e. of a minimum proportion of neighbor-points, may be supplied or can be calculated automatically. Originally designed for the cleaning of heart rates, but suitable for filtering any slowly-changing physiological variable.For more information see Signer (2010)<doi:10.1111/j.2041-210X.2009.00010.x>.
Author: Thomas Ruf [aut, cre]
Maintainer: Thomas Ruf <Thomas.P.Ruf@me.com>
Diff between boxfilter versions 0.1 dated 2022-11-28 and 0.2 dated 2023-05-24
boxfilter-0.1/boxfilter/vignettes/ibex_yearclip_055-comp.jpg |only boxfilter-0.1/boxfilter/vignettes/wb_viemonth-01_02-comp.jpg |only boxfilter-0.2/boxfilter/DESCRIPTION | 10 boxfilter-0.2/boxfilter/MD5 | 28 + boxfilter-0.2/boxfilter/R/boxclip.R | 14 boxfilter-0.2/boxfilter/R/clipview.R | 9 boxfilter-0.2/boxfilter/R/showdata.R |only boxfilter-0.2/boxfilter/R/summary.boxclip.R | 4 boxfilter-0.2/boxfilter/data/sleepduration.RData |only boxfilter-0.2/boxfilter/inst/doc/boxfilter.R | 9 boxfilter-0.2/boxfilter/inst/doc/boxfilter.Rmd | 156 +++++------ boxfilter-0.2/boxfilter/inst/doc/boxfilter.pdf |binary boxfilter-0.2/boxfilter/man/boxclip.Rd | 25 + boxfilter-0.2/boxfilter/man/clipview.Rd | 16 - boxfilter-0.2/boxfilter/man/showdata.Rd |only boxfilter-0.2/boxfilter/man/sleepduration.Rd |only boxfilter-0.2/boxfilter/vignettes/boxfilter.Rmd | 156 +++++------ boxfilter-0.2/boxfilter/vignettes/ibex.jpeg |only boxfilter-0.2/boxfilter/vignettes/wb_month.jpeg |only 19 files changed, 240 insertions(+), 187 deletions(-)
Title: New and Extended Plots, Methods, and Panel Functions for
'lattice'
Description: Extensions to 'lattice', providing new high-level
functions, methods for existing functions, panel functions, and a theme.
Author: Johan Larsson [aut, cre] ,
Deepayan Sarkar [ctb, cph] ,
Brian Ripley [ctb]
Maintainer: Johan Larsson <johanlarsson@outlook.com>
Diff between tactile versions 0.2.0 dated 2018-04-23 and 0.2.1 dated 2023-05-24
DESCRIPTION | 13 MD5 | 102 +- NEWS.md | 16 R/bubbleplot.R | 366 +++---- R/diag.panel.splom.density.R | 20 R/panel.ci.R | 131 +- R/ternaryplot.R | 1560 ++++++++++++++++----------------- README.md | 63 - build/vignette.rds |binary inst/CITATION | 12 inst/WORDLIST |only inst/doc/new-high-level-functions.R | 42 inst/doc/new-high-level-functions.Rmd | 30 inst/doc/new-high-level-functions.html | 300 ++++-- inst/doc/new-methods.R | 20 inst/doc/new-methods.Rmd | 14 inst/doc/new-methods.html | 303 ++++-- inst/doc/new-panel-functions.R | 60 - inst/doc/new-panel-functions.Rmd | 54 - inst/doc/new-panel-functions.html | 279 +++-- inst/doc/tactile-theme.R | 33 inst/doc/tactile-theme.Rmd | 26 inst/doc/tactile-theme.html | 253 +++-- man/bubbleplot.Rd | 16 man/bwplot2.Rd | 40 man/diag.panel.splom.density.Rd | 55 - man/dont_plot.Rd | 2 man/feldspar.Rd | 6 man/panel.bubbleplot.Rd | 4 man/panel.ci.Rd | 90 - man/panel.qqmathci.Rd | 18 man/panel.ternaryplot.Rd | 26 man/panel.ternaryplot.clip.Rd | 9 man/panel.ternaryplot.density.Rd | 18 man/panel.ternaryplot.grid.Rd | 10 man/panel.ternaryplot.response.Rd | 20 man/panel.ternaryplot.scales.Rd | 26 man/prepanel.ci.Rd | 39 man/qqmath.zoo.Rd | 11 man/rescale.Rd | 9 man/seq_pal.Rd | 2 man/setup_key.Rd | 11 man/tactile-package.Rd | 5 man/ternaryplot.Rd | 33 man/xyplot.Arima.Rd | 19 man/xyplot.acf.Rd | 11 man/xyplot.forecast.Rd | 19 man/xyplot.lm.Rd | 26 tests/spelling.R |only vignettes/new-high-level-functions.Rmd | 30 vignettes/new-methods.Rmd | 14 vignettes/new-panel-functions.Rmd | 54 - vignettes/tactile-theme.Rmd | 26 53 files changed, 2481 insertions(+), 1865 deletions(-)
Title: Helper Tools for Australian Hydrologists
Description: Functions to speed up work flow for hydrological analysis.
Focused on Australian climate data (SILO climate data), hydrological models (eWater Source) and in particular South Australia (<https://water.data.sa.gov.au> hydrological data).
Author: Matt Gibbs [aut, cre]
Maintainer: Matt Gibbs <gibbs.ms@gmail.com>
Diff between SWTools versions 0.2.5 dated 2023-04-05 and 1.0 dated 2023-05-24
DESCRIPTION | 6 +++--- MD5 | 6 ++++-- NEWS.md | 4 ++++ R/zzz.R |only inst/CITATION |only 5 files changed, 11 insertions(+), 5 deletions(-)
Title: Simple Features for R
Description: Support for simple features, a standardized way to
encode spatial vector data. Binds to 'GDAL' for reading and writing
data, to 'GEOS' for geometrical operations, and to 'PROJ' for
projection conversions and datum transformations. Uses by default the 's2'
package for spherical geometry operations on ellipsoidal (long/lat) coordinates.
Author: Edzer Pebesma [aut, cre] ,
Roger Bivand [ctb] ,
Etienne Racine [ctb],
Michael Sumner [ctb],
Ian Cook [ctb],
Tim Keitt [ctb],
Robin Lovelace [ctb],
Hadley Wickham [ctb],
Jeroen Ooms [ctb] ,
Kirill Mueller [ctb],
Thomas Lin Pedersen [ctb],
Dan Baston [c [...truncated...]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between sf versions 1.0-12 dated 2023-03-19 and 1.0-13 dated 2023-05-24
DESCRIPTION | 6 - MD5 | 112 +++++++++++------------ NAMESPACE | 1 NEWS.md | 22 ++++ R/RcppExports.R | 6 + R/agr.R | 3 R/cast_sfc.R | 42 ++++++++ R/crs.R | 5 - R/gdal_utils.R | 12 +- R/geom-predicates.R | 18 +-- R/geom-transformers.R | 14 +- R/graticule.R | 4 R/maps.R | 4 R/plot.R | 20 +++- R/sample.R | 9 + R/sf.R | 19 +++ R/sp.R | 15 ++- R/spatstat.R | 1 R/tidyverse.R | 26 +++++ build/vignette.rds |binary configure | 11 +- configure.ac | 9 + inst/doc/sf1.R | 3 inst/doc/sf1.Rmd | 58 ++++++------ inst/doc/sf1.html | 211 ++++++++++++++++++++++---------------------- inst/doc/sf2.html | 6 - inst/doc/sf4.html | 2 inst/doc/sf5.html | 6 - inst/doc/sf6.html | 2 inst/doc/sf7.html | 8 - inst/docker/gdal/Dockerfile | 17 ++- man/gdal_utils.Rd | 7 - man/geos_unary.Rd | 14 +- man/plot.Rd | 7 + man/st_cast.Rd | 8 + man/st_graticule.Rd | 4 man/st_sample.Rd | 2 man/stars.Rd | 5 - src/Makevars.ucrt | 4 src/RcppExports.cpp | 15 +++ src/gdal.cpp | 2 src/gdal_utils.cpp | 27 +++++ src/geos.cpp | 53 ++++++++++- src/mdim.cpp | 11 +- src/stars.cpp | 5 - tests/aggregate.Rout.save | 10 +- tests/cast.R | 7 + tests/cast.Rout.save | 48 ++++------ tests/crs.Rout.save | 51 ++++++++-- tests/maps.Rout.save | 39 +++++--- tests/roundtrip.R | 2 tests/roundtrip.Rout.save | 6 - tests/sfc.Rout.save | 8 - tests/spatstat.Rout.save | 12 +- tests/testthat/test_sf.R | 5 + tests/testthat/test_tidy.R | 3 vignettes/sf1.Rmd | 58 ++++++------ 57 files changed, 717 insertions(+), 368 deletions(-)
Title: Convenience Functions for Package 'lavaan'
Description: Affords an alternative, vector-based syntax to 'lavaan', as well as other
convenience functions such as naming paths and defining indirect
links automatically, in addition to convenience formatting optimized
for a publication and script sharing workflow.
Author: Remi Theriault [aut, cre]
Maintainer: Remi Theriault <remi.theriault@mail.mcgill.ca>
Diff between lavaanExtra versions 0.1.4 dated 2023-02-04 and 0.1.6 dated 2023-05-24
lavaanExtra-0.1.4/lavaanExtra/inst/doc/fullworkflow.R |only lavaanExtra-0.1.4/lavaanExtra/inst/doc/fullworkflow.Rmd |only lavaanExtra-0.1.4/lavaanExtra/inst/doc/fullworkflow.html |only lavaanExtra-0.1.4/lavaanExtra/inst/doc/indirect.R |only lavaanExtra-0.1.4/lavaanExtra/inst/doc/indirect.Rmd |only lavaanExtra-0.1.4/lavaanExtra/inst/doc/indirect.html |only lavaanExtra-0.1.4/lavaanExtra/inst/doc/regression.R |only lavaanExtra-0.1.4/lavaanExtra/inst/doc/regression.Rmd |only lavaanExtra-0.1.4/lavaanExtra/inst/doc/regression.html |only lavaanExtra-0.1.4/lavaanExtra/inst/doc/special.R |only lavaanExtra-0.1.4/lavaanExtra/inst/doc/special.Rmd |only lavaanExtra-0.1.4/lavaanExtra/inst/doc/special.html |only lavaanExtra-0.1.4/lavaanExtra/inst/doc/test.R |only lavaanExtra-0.1.4/lavaanExtra/inst/doc/test.Rmd |only lavaanExtra-0.1.4/lavaanExtra/inst/doc/test.html |only lavaanExtra-0.1.4/lavaanExtra/tests/testthat/cfaplot.pdf |only lavaanExtra-0.1.4/lavaanExtra/tests/testthat/table.docx |only lavaanExtra-0.1.4/lavaanExtra/tests/testthat/table.html |only lavaanExtra-0.1.4/lavaanExtra/tests/testthat/table.png |only lavaanExtra-0.1.4/lavaanExtra/tests/testthat/table.pptx |only lavaanExtra-0.1.4/lavaanExtra/tests/testthat/testthat-problems.rds |only lavaanExtra-0.1.4/lavaanExtra/vignettes/fullworkflow.Rmd |only lavaanExtra-0.1.4/lavaanExtra/vignettes/images |only lavaanExtra-0.1.4/lavaanExtra/vignettes/indirect.Rmd |only lavaanExtra-0.1.4/lavaanExtra/vignettes/regression.Rmd |only lavaanExtra-0.1.4/lavaanExtra/vignettes/special.Rmd |only lavaanExtra-0.1.4/lavaanExtra/vignettes/test.Rmd |only lavaanExtra-0.1.6/lavaanExtra/DESCRIPTION | 16 lavaanExtra-0.1.6/lavaanExtra/MD5 | 120 - lavaanExtra-0.1.6/lavaanExtra/NAMESPACE | 1 lavaanExtra-0.1.6/lavaanExtra/NEWS.md | 62 lavaanExtra-0.1.6/lavaanExtra/R/cfa_fit_plot.R | 168 +- lavaanExtra-0.1.6/lavaanExtra/R/lavaan_cor.R |only lavaanExtra-0.1.6/lavaanExtra/R/lavaan_cov.R | 106 - lavaanExtra-0.1.6/lavaanExtra/R/lavaan_ind.R | 126 - lavaanExtra-0.1.6/lavaanExtra/R/lavaan_reg.R | 100 - lavaanExtra-0.1.6/lavaanExtra/R/nice_fit.R | 64 lavaanExtra-0.1.6/lavaanExtra/R/nice_lavaanPlot.R | 106 - lavaanExtra-0.1.6/lavaanExtra/R/nice_tidySEM.R | 308 ++-- lavaanExtra-0.1.6/lavaanExtra/R/write_lavaan.R | 2 lavaanExtra-0.1.6/lavaanExtra/R/zzz.R | 18 lavaanExtra-0.1.6/lavaanExtra/README.md | 770 +++++----- lavaanExtra-0.1.6/lavaanExtra/build/vignette.rds |binary lavaanExtra-0.1.6/lavaanExtra/inst/CITATION | 8 lavaanExtra-0.1.6/lavaanExtra/inst/doc/example.Rmd | 760 ++++----- lavaanExtra-0.1.6/lavaanExtra/inst/doc/example.html | 495 +++--- lavaanExtra-0.1.6/lavaanExtra/man/cfa_fit_plot.Rd | 2 lavaanExtra-0.1.6/lavaanExtra/man/figures/README-cfa2-1.png |binary lavaanExtra-0.1.6/lavaanExtra/man/figures/README-covariance-1.png |binary lavaanExtra-0.1.6/lavaanExtra/man/figures/README-indirect2-1.png |binary lavaanExtra-0.1.6/lavaanExtra/man/figures/README-path2-1.png |binary lavaanExtra-0.1.6/lavaanExtra/man/figures/README-saturated-1.png |binary lavaanExtra-0.1.6/lavaanExtra/man/figures/cfaplot.png |binary lavaanExtra-0.1.6/lavaanExtra/man/figures/cfaplot2.png |binary lavaanExtra-0.1.6/lavaanExtra/man/figures/holzinger_model.png |binary lavaanExtra-0.1.6/lavaanExtra/man/figures/semplot.png |binary lavaanExtra-0.1.6/lavaanExtra/man/lavaan_cor.Rd |only lavaanExtra-0.1.6/lavaanExtra/man/lavaan_cov.Rd | 15 lavaanExtra-0.1.6/lavaanExtra/man/lavaan_ind.Rd | 31 lavaanExtra-0.1.6/lavaanExtra/man/lavaan_reg.Rd | 19 lavaanExtra-0.1.6/lavaanExtra/man/nice_fit.Rd | 18 lavaanExtra-0.1.6/lavaanExtra/man/nice_lavaanPlot.Rd | 18 lavaanExtra-0.1.6/lavaanExtra/man/nice_tidySEM.Rd | 15 lavaanExtra-0.1.6/lavaanExtra/man/write_lavaan.Rd | 2 lavaanExtra-0.1.6/lavaanExtra/tests/testthat.R | 24 lavaanExtra-0.1.6/lavaanExtra/tests/testthat/test-cfa_fit_plot.R | 120 - lavaanExtra-0.1.6/lavaanExtra/tests/testthat/test-lavaan_cor.R |only lavaanExtra-0.1.6/lavaanExtra/tests/testthat/test-lavaan_cov.R | 76 lavaanExtra-0.1.6/lavaanExtra/tests/testthat/test-lavaan_ind.R | 77 - lavaanExtra-0.1.6/lavaanExtra/tests/testthat/test-lavaan_reg.R | 77 - lavaanExtra-0.1.6/lavaanExtra/tests/testthat/test-nice_fit.R | 10 lavaanExtra-0.1.6/lavaanExtra/tests/testthat/test-nice_lavaanPlot.R | 134 - lavaanExtra-0.1.6/lavaanExtra/tests/testthat/test-nice_tidySEM.R | 268 +-- lavaanExtra-0.1.6/lavaanExtra/tests/testthat/test-write_lavaan.R | 4 lavaanExtra-0.1.6/lavaanExtra/vignettes/example.Rmd | 760 ++++----- 75 files changed, 2580 insertions(+), 2320 deletions(-)
More information about faersquarterlydata at CRAN
Permanent link
More information about WeightedPortTest at CRAN
Permanent link
Title: Read, Plot and Analyse Output from the DEPONS Model
Description: Methods for analyzing population dynamics and movement tracks simulated using the DEPONS model <https://www.depons.eu> (v.3.0), for manipulating input raster files, shipping routes and for analyzing sound propagated from ships.
Author: Jacob Nabe-Nielsen and Caitlin K. Frankish
Maintainer: Jacob Nabe-Nielsen <jnn@ecos.au.dk>
Diff between DEPONS2R versions 1.2.0 dated 2023-04-21 and 1.2.1 dated 2023-05-24
DESCRIPTION | 6 +++--- MD5 | 4 ++-- R/ships_methods.R | 9 +++++++++ 3 files changed, 14 insertions(+), 5 deletions(-)
More information about boxplotcluster at CRAN
Permanent link
Title: Download Stats of R Packages
Description: Monthly download stats of 'CRAN' and 'Bioconductor' packages.
Download stats of 'CRAN' packages is from the 'RStudio' 'CRAN mirror', see <https://cranlogs.r-pkg.org:443>.
'Bioconductor' package download stats is at <https://bioconductor.org/packages/stats/>.
Author: Guangchuang Yu [aut, cre]
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Diff between dlstats versions 0.1.6 dated 2022-12-09 and 0.1.7 dated 2023-05-24
DESCRIPTION | 8 MD5 | 50 ++-- NAMESPACE | 54 ++-- R/app.R | 62 ++--- R/bioc_stats.R | 130 ++++++----- R/cran_stats.R | 316 +++++++++++++-------------- R/dlstats.R | 36 +-- R/plot_bioc_stats.R | 196 ++++++++--------- R/utilities.R | 34 +- R/zzz.R | 20 - build/vignette.rds |binary inst/biocApp/server.R | 42 +-- inst/biocApp/ui.R | 46 ++-- inst/cranApp/server.R | 40 +-- inst/cranApp/ui.R | 46 ++-- inst/doc/dlstats.R | 82 +++---- inst/doc/dlstats.Rmd | 196 ++++++++--------- inst/doc/dlstats.html | 516 ++++++++++++++++++++++----------------------- man/biocApp.Rd | 28 +- man/bioc_stats.Rd | 64 ++--- man/cranApp.Rd | 28 +- man/cran_stats.Rd | 60 ++--- man/plot_bioc_stats.Rd | 40 +-- man/plot_cran_stats.Rd | 40 +-- man/set_cran_start_year.Rd | 34 +- vignettes/dlstats.Rmd | 196 ++++++++--------- 26 files changed, 1187 insertions(+), 1177 deletions(-)