Title: Visualize Simon's Two-Stage Design
Description: To visualize the probabilities of early termination,
fail and success of Simon's two-stage design. To evaluate
and visualize the operating characteristics of Simon's
two-stage design.
Author: Tingting Zhan [aut, cre]
Maintainer: Tingting Zhan <tingtingzhan@gmail.com>
Diff between VisualizeSimon2Stage versions 0.2.1 dated 2025-04-13 and 0.2.2 dated 2025-04-27
DESCRIPTION | 24 +++++----- MD5 | 16 +++---- NAMESPACE | 1 R/Sprintf.R | 12 ++--- R/autoplot.R | 50 ++++++++++++++-------- inst/doc/intro.R | 9 +--- inst/doc/intro.html | 114 +++++++++++++++++++++++----------------------------- inst/doc/intro.qmd | 17 +++---- vignettes/intro.qmd | 17 +++---- 9 files changed, 129 insertions(+), 131 deletions(-)
More information about VisualizeSimon2Stage at CRAN
Permanent link
Title: Simplify 'ggplot2' Visualisation
Description: Simplify 'ggplot2' visualisation with 'ggblanket' wrapper
functions.
Author: David Hodge [aut, cre, cph]
Maintainer: David Hodge <davidhodge931@gmail.com>
Diff between ggblanket versions 12.2.0 dated 2025-03-10 and 12.3.0 dated 2025-04-27
ggblanket-12.2.0/ggblanket/man/aes_colour_contrast.Rd |only ggblanket-12.3.0/ggblanket/DESCRIPTION | 6 ggblanket-12.3.0/ggblanket/MD5 | 316 +- ggblanket-12.3.0/ggblanket/NAMESPACE | 6 ggblanket-12.3.0/ggblanket/NEWS.md | 11 ggblanket-12.3.0/ggblanket/R/aes.R | 12 ggblanket-12.3.0/ggblanket/R/annotate_axis_line.R | 18 ggblanket-12.3.0/ggblanket/R/gg_blanket.R | 36 ggblanket-12.3.0/ggblanket/R/guides.R |only ggblanket-12.3.0/ggblanket/R/mode_defaults.R | 5 ggblanket-12.3.0/ggblanket/R/set.R | 2 ggblanket-12.3.0/ggblanket/build/vignette.rds |binary ggblanket-12.3.0/ggblanket/inst/doc/ggblanket.R | 2 ggblanket-12.3.0/ggblanket/inst/doc/ggblanket.Rmd | 2 ggblanket-12.3.0/ggblanket/inst/doc/ggblanket.html | 12 ggblanket-12.3.0/ggblanket/man/aes_contrast.Rd |only ggblanket-12.3.0/ggblanket/man/annotate_axis_line.Rd | 18 ggblanket-12.3.0/ggblanket/man/gg_area.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_bar.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_bin_2d.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_blanket.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_boxplot.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_col.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_contour.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_contour_filled.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_crossbar.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_density.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_density_2d.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_density_2d_filled.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_errorbar.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_freqpoly.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_function.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_hex.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_histogram.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_jitter.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_label.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_line.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_linerange.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_path.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_point.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_pointrange.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_polygon.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_qq.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_quantile.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_raster.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_rect.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_ribbon.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_ribbon_line.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_rug.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_segment.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_sf.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_smooth.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_step.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_text.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_tile.Rd | 2 ggblanket-12.3.0/ggblanket/man/gg_violin.Rd | 2 ggblanket-12.3.0/ggblanket/man/guides_shape_grey.Rd |only ggblanket-12.3.0/ggblanket/man/lightness.Rd | 3 ggblanket-12.3.0/ggblanket/man/set_blanket.Rd | 2 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-area.svg | 55 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-bar.svg | 73 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-bin-2d.svg | 675 ++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-blanket.svg | 93 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-boxplot.svg | 91 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-col.svg | 65 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-contour-filled.svg | 145 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-contour.svg | 103 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-crossbar.svg | 77 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-density-2d-filled.svg | 145 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-density-2d.svg | 101 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-density.svg | 109 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-errorbar.svg | 81 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-freqpoly.svg | 85 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-function.svg | 55 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-hex.svg | 745 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-histogram.svg | 383 +-- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-label.svg | 67 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-line.svg | 53 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-linerange.svg | 65 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-path.svg | 67 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-point.svg | 787 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-pointrange.svg | 77 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-polygon.svg | 133 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-qq.svg | 865 +++---- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-quantile.svg | 63 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-raster.svg | 105 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-rect.svg | 111 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-ribbon.svg | 65 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-segment.svg | 67 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-smooth.svg | 105 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-step.svg | 57 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-text.svg | 61 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-tile.svg | 77 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-demo-light/gg-violin.svg | 93 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-go-further/10.svg | 123 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-go-further/11.svg | 111 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-go-further/12.svg | 253 +- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-go-further/13.svg | 151 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-go-further/3.svg | 371 +-- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-go-further/4.svg | 55 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-go-further/5.svg | 169 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-go-further/6.svg | 83 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-go-further/7.svg | 75 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-go-further/8.svg | 73 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/article-go-further/9.svg | 769 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/col_palette/1.svg | 145 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/col_palette/10.svg | 145 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/col_palette/11.svg | 65 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/col_palette/12.svg | 169 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/col_palette/2.svg | 743 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/col_palette/3.svg | 747 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/col_palette/4.svg | 145 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/col_palette/5.svg | 743 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/col_palette/6.svg | 747 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/col_palette/7.svg | 743 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/col_palette/8.svg | 747 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/col_palette/9.svg | 747 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/datetime/date.svg | 83 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/datetime/datetime.svg | 83 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/datetime/time.svg | 89 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/ggproto-etc/all-3.svg | 93 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/ggproto-etc/default.svg | 93 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/ggproto-etc/geomviolin.svg | 93 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/ggproto-etc/positiondodge.svg | 93 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/ggproto-etc/statydensity.svg | 93 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/labelled/labelled.svg | 81 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/modes/dark-mode-r.svg | 1131 +++++----- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/modes/light-mode-b.svg | 1109 ++++----- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/modes/light-mode-r.svg | 1131 +++++----- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/modes/light-mode-t.svg | 1131 +++++----- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/numeric-col/light-mode-b.svg | 801 +++---- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/numeric-col/light-mode-r.svg | 853 +++---- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/numeric-col/light-mode-t.svg | 853 +++---- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/positional_scales/1.svg | 829 +++---- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/positional_scales/2.svg | 753 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/positional_scales/3.svg | 817 +++---- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/ribbon-line/datetime.svg | 99 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/set_blanket/1.svg | 803 +++---- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/set_blanket/2.svg | 789 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/set_blanket/3.svg | 757 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/set_blanket/4.svg | 779 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/set_blanket/5.svg | 787 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/set_blanket/6.svg | 131 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/symmetric/1.svg | 125 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/symmetric/2.svg | 135 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/1.svg | 765 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/15.svg | 117 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/16.svg | 69 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/17.svg | 169 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/18.svg | 87 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/19.svg | 87 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/2.svg | 787 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/20.svg | 787 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/21.svg | 233 +- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/3.svg | 63 ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/4.svg | 213 - ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/5.svg | 769 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/6.svg | 745 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/8.svg | 753 +++--- ggblanket-12.3.0/ggblanket/tests/testthat/_snaps/vignette-ggblanket/9.svg | 745 +++--- ggblanket-12.3.0/ggblanket/vignettes/ggblanket.Rmd | 2 161 files changed, 17899 insertions(+), 17753 deletions(-)
Title: Cross-Validation Model Averaging for Partial Linear Functional
Additive Models
Description: Produce an averaging estimate/prediction by combining all candidate models for partial linear functional additive models, using multi-fold cross-validation criterion. More details can be referred to arXiv e-Prints via <doi:10.48550/arXiv.2105.00966>.
Author: Shishi Liu [aut, cre],
Jingxiao Zhang [aut]
Maintainer: Shishi Liu <liushishi_644@163.com>
Diff between cvmaPLFAM versions 0.1.0 dated 2023-06-09 and 0.1.1 dated 2025-04-27
cvmaPLFAM-0.1.0/cvmaPLFAM/R/predRisk.R |only cvmaPLFAM-0.1.0/cvmaPLFAM/man/predRisk.Rd |only cvmaPLFAM-0.1.1/cvmaPLFAM/DESCRIPTION | 12 +- cvmaPLFAM-0.1.1/cvmaPLFAM/MD5 | 34 +++-- cvmaPLFAM-0.1.1/cvmaPLFAM/NAMESPACE | 3 cvmaPLFAM-0.1.1/cvmaPLFAM/NEWS.md |only cvmaPLFAM-0.1.1/cvmaPLFAM/R/cvfolds.R | 1 cvmaPLFAM-0.1.1/cvmaPLFAM/R/cvmaPLFAM.R | 158 +++++++------------------- cvmaPLFAM-0.1.1/cvmaPLFAM/R/cvpredRisk.R |only cvmaPLFAM-0.1.1/cvmaPLFAM/R/data_gen.R | 154 ++++++++++++++++--------- cvmaPLFAM-0.1.1/cvmaPLFAM/R/fpcscore.R | 9 - cvmaPLFAM-0.1.1/cvmaPLFAM/R/modelspec.R | 114 ++++++++++++------- cvmaPLFAM-0.1.1/cvmaPLFAM/R/plam.fit.R | 116 +++++++++++++++---- cvmaPLFAM-0.1.1/cvmaPLFAM/R/simu_funs.R | 47 ++++--- cvmaPLFAM-0.1.1/cvmaPLFAM/man/cvfolds.Rd | 70 +++++------ cvmaPLFAM-0.1.1/cvmaPLFAM/man/cvmaPLFAM.Rd | 168 +++++++++++++--------------- cvmaPLFAM-0.1.1/cvmaPLFAM/man/cvpredRisk.Rd |only cvmaPLFAM-0.1.1/cvmaPLFAM/man/data_gen.Rd | 98 +++++++++------- cvmaPLFAM-0.1.1/cvmaPLFAM/man/fpcscore.Rd | 79 +++++-------- cvmaPLFAM-0.1.1/cvmaPLFAM/man/modelspec.Rd | 109 +++++++++++------- cvmaPLFAM-0.1.1/cvmaPLFAM/man/plam.fit.Rd |only 21 files changed, 634 insertions(+), 538 deletions(-)
Title: Extracting Signals from Wavelet Spectra
Description: The continuous wavelet transform enables the observation of transient/non-stationary cyclicity in time-series. The goal of cyclostratigraphic studies is to define frequency/period in the depth/time domain. By conducting the continuous wavelet transform on cyclostratigraphic data series one can observe and extract cyclic signals/signatures from signals. These results can then be visualized and interpreted enabling one to identify/interpret cyclicity in the geological record, which can be used to construct astrochronological age-models and identify and interpret cyclicity in past and present climate systems. The 'WaverideR' R package builds upon existing literature and existing codebase. The list of articles which are relevant can be grouped in four subjects; cyclostratigraphic data analysis,example data sets,the (continuous) wavelet transform and astronomical solutions. References for the cyclostratigraphic data analysis articles are: Stephen Meyers (2019) <doi:10.1016/j.earscirev.20 [...truncated...]
Author: Michiel Arts [aut, cre]
Maintainer: Michiel Arts <michiel.arts@stratigraphy.eu>
Diff between WaverideR versions 0.4.0 dated 2025-04-25 and 0.4.1 dated 2025-04-27
DESCRIPTION | 6 +++--- MD5 | 4 ++-- R/track_period_wavelet.R | 2 +- 3 files changed, 6 insertions(+), 6 deletions(-)
Title: Models for Correlation Matrices Based on Graphs
Description: Implement some models for
correlation/covariance matrices including two approaches
to model correlation matrices from a graphical structure.
One use latent parent variables as proposed in
Sterrantino et. al. (2024) <doi:10.48550/arXiv.2312.06289>.
The other uses a graph to specify conditional
relations between the variables.
The graphical structure makes correlation matrices
interpretable and avoids the quadratic increase of
parameters as a function of the dimension.
In the first approach a natural sequence of simpler
models along with a complexity penalization is used.
The second penalizes deviations from a base model.
These can be used as prior for model parameters,
considering C code through the 'cgeneric' interface
for the 'INLA' package (<https://www.r-inla.org>).
This allows one to use these models as building
blocks combined and to other latent Gaussian models
in order to build complex data models.
Author: Elias Krainski [cre, aut, cph]
,
Denis Rustand [aut, cph] ,
Anna Freni-Sterrantino [aut, cph]
,
Janet van Niekerk [aut, cph] ,
Haavard Rue’ [aut]
Maintainer: Elias Krainski <eliaskrainski@gmail.com>
Diff between graphpcor versions 0.1.11 dated 2025-04-19 and 0.1.12 dated 2025-04-27
graphpcor-0.1.11/graphpcor/src/cgeneric_get.c |only graphpcor-0.1.11/graphpcor/src/cgeneric_kronecker.c |only graphpcor-0.1.12/graphpcor/DESCRIPTION | 10 +++++----- graphpcor-0.1.12/graphpcor/MD5 | 12 +++++------- graphpcor-0.1.12/graphpcor/R/kronecker.R | 6 +++++- graphpcor-0.1.12/graphpcor/R/param_prec.R | 10 ++++++++-- graphpcor-0.1.12/graphpcor/man/prec.Rd | 5 +++++ graphpcor-0.1.12/graphpcor/src/Makevars | 2 +- 8 files changed, 29 insertions(+), 16 deletions(-)
Title: Provides Tests and Graphics for Assessing Tests of Equivalence
Description: Provides statistical tests and graphics for assessing tests
of equivalence. Such tests have similarity as the alternative
hypothesis instead of the null. Sample data sets are included.
Author: Andrew Robinson [aut, cre]
Maintainer: Andrew Robinson <apro@unimelb.edu.au>
Diff between equivalence versions 0.7.2 dated 2016-05-13 and 0.8.2 dated 2025-04-27
ChangeLog | 19 +++++++++++++++++++ DESCRIPTION | 18 +++++++++++------- MD5 | 23 ++++++++++++----------- R/equiv.boot.R | 13 ++++++------- R/equivalence.xyplot.R | 8 ++++---- R/tost.R | 14 -------------- data/pref.4PG.rda |binary data/pref.LAI.rda |binary data/ufc.rda |binary man/equiv.boot.Rd | 2 +- man/equivalence.xyplot.Rd | 6 +++--- man/rtost.Rd | 8 ++++---- src/equivalence_init.c |only 13 files changed, 60 insertions(+), 51 deletions(-)
Title: Difference-in-Differences with Unpoolable Data
Description: A framework for estimating difference-in-differences with
unpoolable data, based on Karim, Webb, Austin, and Strumpf (2024)
<doi:10.48550/arXiv.2403.15910>. Supports common or staggered adoption, multiple
groups, and the inclusion of covariates. Also computes p-values for the
aggregate average treatment effect on the treated via the
randomization inference procedure described in MacKinnon and Webb (2020)
<doi:10.1016/j.jeconom.2020.04.024>.
Author: Eric Jamieson [aut, cre, cph]
Maintainer: Eric Jamieson <ericbrucejamieson@gmail.com>
Diff between undidR versions 1.0.1 dated 2025-02-24 and 1.0.2 dated 2025-04-27
DESCRIPTION | 6 ++-- MD5 | 18 +++++++------- NEWS.md | 4 +++ R/create_diff_df.r | 37 ++++++++++++++++++++---------- R/helpers.R | 23 +++++++++--------- R/plot_parallel_trends.r | 28 ++++++++++++++--------- R/undid_stage_three.r | 7 +++-- R/undid_stage_two.r | 51 +++++++++++++++++++++++++----------------- inst/doc/undidR.html | 32 +++++++++++++------------- tests/testthat/test-helpers.R | 18 +++++++++----- 10 files changed, 132 insertions(+), 92 deletions(-)
Title: Fast Likelihood Calculation for Phylogenetic Comparative Models
Description: Provides a C++ backend for multivariate phylogenetic comparative
models implemented in the R-package 'PCMBase'. Can be used in combination
with 'PCMBase' to enable fast and parallel likelihood calculation. Implements
the pruning likelihood calculation algorithm described in Mitov et al. (2020)
<doi:10.1016/j.tpb.2019.11.005>. Uses the 'SPLITT' C++ library for parallel tree traversal
described in Mitov and Stadler (2018) <doi:10.1111/2041-210X.13136>.
Author: Venelin Mitov [aut, cre, cph]
Maintainer: Venelin Mitov <vmitov@gmail.com>
Diff between PCMBaseCpp versions 0.1.9 dated 2020-03-22 and 0.1.10 dated 2025-04-27
DESCRIPTION | 12 MD5 | 34 - NEWS.md | 54 +-- R/BenchmarkRvsCpp.R | 648 ++++++++++++++++++------------------- R/Generic.R | 550 +++++++++++++++---------------- README.md | 72 +--- build/vignette.rds |binary inst/CITATION | 15 inst/doc/PCMBaseCpp.R | 10 inst/doc/PCMBaseCpp.html | 386 ++++++++++++---------- man/BenchmarkRvsCpp.Rd | 24 - man/MiniBenchmarkRvsCpp.Rd | 18 - man/PCMInfoCpp.Rd | 16 man/benchmarkData.Rd | 6 man/benchmarkResults.Rd | 4 man/benchmarkResultsNoTransform.Rd | 4 src/Makevars | 3 vignettes/REFERENCES-R.bib | 114 ++++-- 18 files changed, 1050 insertions(+), 920 deletions(-)
Title: R Interface to 'Redatam' Library
Description: Provides an API to work with 'Redatam' (see <https://redatam.org>)
databases in both formats: 'RXDB' (new format) and 'DICX' (old format) and running
'Redatam' programs written in 'SPC' language. It's a wrapper around 'Redatam'
core and provides functions to open/close a database (redatam_open()/redatam_close()),
list entities and variables from the database (redatam_entities(), redatam_variables())
and execute a 'SPC' program and gets the results as data frames
(redatam_query(), redatam_run()).
Author: Jaime Salvador [aut, cre] ,
CELADE [cph]
Maintainer: Jaime Salvador <jaime.salvador@ideasybits.com>
Diff between redatamx versions 1.1.2 dated 2025-04-05 and 1.1.3 dated 2025-04-27
DESCRIPTION | 6 MD5 | 68 +++--- NAMESPACE | 30 +-- NEWS.md | 70 +++---- R/output-env.R | 82 ++++---- R/redatam-api.R | 414 +++++++++++++++++++++--------------------- R/redatam-package.R | 16 - R/redatam-plugins.R | 76 +++---- R/redatam-query.R | 206 ++++++++++---------- R/redatam-run.R | 200 ++++++++++---------- R/zzz.R | 34 +-- README.md | 236 +++++++++++------------ configure | 9 configure.win | 83 ++++---- inst/COPYRIGHTS | 16 - inst/License.txt | 40 ++-- man/outputs.Rd | 62 +++--- man/redatam_close.Rd | 56 ++--- man/redatam_create.Rd | 54 ++--- man/redatam_destroy_.Rd | 48 ++-- man/redatam_entities.Rd | 52 ++--- man/redatam_info.Rd | 40 ++-- man/redatam_init_.Rd | 54 ++--- man/redatam_internal_query.Rd | 58 ++--- man/redatam_internal_run.Rd | 58 ++--- man/redatam_load_plugin.Rd | 58 ++--- man/redatam_open.Rd | 52 ++--- man/redatam_query.Rd | 70 +++---- man/redatam_run.Rd | 70 +++---- man/redatam_save.Rd | 60 +++--- man/redatam_variables.Rd | 56 ++--- man/redatam_version.Rd | 40 ++-- man/redatamx-package.Rd | 58 ++--- src/dylib.hpp | 2 src/red_initialize.cpp | 3 35 files changed, 1273 insertions(+), 1264 deletions(-)
Title: Micro-Macro Analysis for Social Networks
Description: Estimates micro effects on macro structures (MEMS) and average micro mediated effects (AMME).
URL: <https://github.com/sduxbury/netmediate>.
BugReports: <https://github.com/sduxbury/netmediate/issues>.
Robins, Garry, Phillipa Pattison, and Jodie Woolcock (2005) <doi:10.1086/427322>.
Snijders, Tom A. B., and Christian E. G. Steglich (2015) <doi:10.1177/0049124113494573>.
Imai, Kosuke, Luke Keele, and Dustin Tingley (2010) <doi:10.1037/a0020761>.
Duxbury, Scott (2023) <doi:10.1177/00811750231209040>.
Duxbury, Scott (2024) <doi:10.1177/00811750231220950>.
Author: Scott Duxbury [aut, cre, cph],
Xin Zhao [ctb]
Maintainer: Scott Duxbury <duxbury@email.unc.edu>
Diff between netmediate versions 1.0.1 dated 2024-06-19 and 1.1.0 dated 2025-04-27
DESCRIPTION | 15 +-- MD5 | 51 +++++----- NAMESPACE | 2 NEWS |only R/AMME.R | 10 +- R/AMME_nonparam.R | 65 +++++++++++++ R/AMME_param.R | 66 +++++++++++++ R/MEMS.R | 30 +++--- R/MEMS_QAP.R | 55 +++++++++++ R/MEMS_ergm.R | 12 +- R/MEMS_ergm_nonparam.R | 54 ++++++++++- R/MEMS_ergm_param.R | 65 +++++++++++++ R/MEMS_glm.R | 9 + R/MEMS_glm_nonparam.R | 48 +++++++++- R/MEMS_glm_param.R | 48 +++++++++- R/MEMS_pooled_ergm.R | 9 + R/MEMS_pooled_ergm_nonparam.R | 56 +++++++++++ R/MEMS_pooled_ergm_param.R | 58 +++++++++++- R/MEMS_pooled_saom.R | 59 +++++++++++- R/MEMS_rem.R | 10 +- R/MEMS_rem_param.R | 60 +++++++++++- R/MEMS_saom.R | 56 +++++++++++ R/compare_MEMS.R | 167 ++++++++++++++++++++++------------- R/mediate_MEMS.R |only man/AMME.Rd | 10 +- man/MEMS.Rd | 14 ++ man/compare_MEMS.Rd | 200 ++++++++++++++++++++++++++++++++++++++++-- man/mediate_MEMS.Rd |only 28 files changed, 1071 insertions(+), 158 deletions(-)
Title: Useful Functions for Programming and Generating Documents
Description: Tools to help developers and producers manipulate R objects
and outputs. It includes tools for displaying results and objects, and
for formatting them in the correct format.
Author: Tanguy Barthelemy [aut, cre]
Maintainer: Tanguy Barthelemy <tanguy.barthelemy@insee.fr>
Diff between TBox versions 0.1.2 dated 2024-06-14 and 0.2.2 dated 2025-04-27
DESCRIPTION | 23 - MD5 | 48 ++ NAMESPACE | 13 NEWS.md | 74 ++++ R/TBox-package.R | 5 R/format_code.R | 439 +++++++++++++++++++++------ R/manage_file.R |only README.md | 4 inst/extdata/file.csv |only inst/extdata/style.css |only inst/extdata/template.docx |only man/create_preamble_tex.Rd |only man/generate_chunk_header.Rd |only man/generate_rmd_file.Rd |only man/get_data.Rd |only man/get_fira_path.Rd |only man/get_latex_engine.Rd |only man/get_word_template_path.Rd |only man/render_code.Rd | 50 ++- man/write_data.Rd |only tests/testthat.R | 4 tests/testthat/helper.R |only tests/testthat/output_data |only tests/testthat/template_rmd |only tests/testthat/test-generate_chunk_header.R | 10 tests/testthat/test-generate_rmd_file.R | 245 ++++++++------- tests/testthat/test-get_fira_path.R |only tests/testthat/test-get_word_template_path.R |only tests/testthat/test-render_code.R |only 29 files changed, 669 insertions(+), 246 deletions(-)
Title: Functions and Datasets for "Introduction to Scientific
Programming and Simulation Using R"
Description: Provides functions and datasets from Jones, O.D., R. Maillardet, and A.P. Robinson. 2014. An Introduction to Scientific Programming and Simulation, Using R. 2nd Ed. Chapman And Hall/CRC.
Author: Owen Jones [aut],
Robert Maillardet [aut],
Andrew Robinson [aut, cre],
Olga Borovkova [aut],
Steven Carnie [aut]
Maintainer: Andrew Robinson <apro@unimelb.edu.au>
Diff between spuRs versions 2.0.2 dated 2018-05-21 and 2.0.3 dated 2025-04-27
DESCRIPTION | 30 +++++++++++++++++++++++++----- MD5 | 20 ++++++++++---------- data/kew.rda |binary data/treeg.rda |binary data/trees.rda |binary data/ufc.plots.rda |binary data/ufc.rda |binary inst/resources/errata.pdf |binary man/fitDistances.Rd | 2 +- man/kew.Rd | 2 +- man/vol.m3.Rd | 2 +- 11 files changed, 38 insertions(+), 18 deletions(-)
Title: 1d Goodness of Fit Tests
Description: Routines that allow the user to run a large number of goodness-of-fit tests.
It allows for data to be continuous or discrete. It includes routines to estimate
the power of the tests and display them as a power graph.
The routine run.studies allows a user to quickly study the power of a new method and
how it compares to some of the standard ones.
Author: Wolfgang Rolke [aut, cre]
Maintainer: Wolfgang Rolke <wolfgang.rolke@upr.edu>
Diff between Rgof versions 3.1.0 dated 2025-03-13 and 3.2.0 dated 2025-04-27
Rgof-3.1.0/Rgof/R/gof_power_cont.R |only Rgof-3.1.0/Rgof/R/gof_power_disc.R |only Rgof-3.1.0/Rgof/R/gof_test_cont.R |only Rgof-3.1.0/Rgof/R/gof_test_cont_adj.R |only Rgof-3.1.0/Rgof/R/gof_test_disc.R |only Rgof-3.1.0/Rgof/R/gof_test_disc_adj.R |only Rgof-3.1.0/Rgof/R/power_cont_R.R |only Rgof-3.1.0/Rgof/R/power_disc_R.R |only Rgof-3.1.0/Rgof/man/gof_cont.Rd |only Rgof-3.1.0/Rgof/man/gof_disc.Rd |only Rgof-3.1.0/Rgof/man/gof_power_cont.Rd |only Rgof-3.1.0/Rgof/man/gof_power_disc.Rd |only Rgof-3.1.0/Rgof/man/gof_test_cont.Rd |only Rgof-3.1.0/Rgof/man/gof_test_cont_adj.Rd |only Rgof-3.1.0/Rgof/man/gof_test_disc.Rd |only Rgof-3.1.0/Rgof/man/gof_test_disc_adj.Rd |only Rgof-3.1.0/Rgof/man/power_cont.Rd |only Rgof-3.1.0/Rgof/man/power_cont_R.Rd |only Rgof-3.1.0/Rgof/man/power_disc.Rd |only Rgof-3.1.0/Rgof/man/power_disc_R.Rd |only Rgof-3.1.0/Rgof/src/gof_cont.cpp |only Rgof-3.1.0/Rgof/src/gof_cont.h |only Rgof-3.1.0/Rgof/src/gof_disc.cpp |only Rgof-3.1.0/Rgof/src/gof_disc.h |only Rgof-3.1.0/Rgof/src/power_cont.cpp |only Rgof-3.1.0/Rgof/src/power_disc.cpp |only Rgof-3.1.0/Rgof/src/teststatistics.cpp |only Rgof-3.1.0/Rgof/src/teststatistics.h |only Rgof-3.2.0/Rgof/DESCRIPTION | 6 Rgof-3.2.0/Rgof/MD5 | 73 +-- Rgof-3.2.0/Rgof/NEWS.md | 3 Rgof-3.2.0/Rgof/R/RcppExports.R | 112 ++-- Rgof-3.2.0/Rgof/R/gof_power.R | 186 +++++-- Rgof-3.2.0/Rgof/R/gof_test.R | 138 ++++- Rgof-3.2.0/Rgof/R/gof_test_adjusted_pvalue.R | 192 ++++++- Rgof-3.2.0/Rgof/R/run.studies.R | 14 Rgof-3.2.0/Rgof/R/timecheck.R | 12 Rgof-3.2.0/Rgof/inst/doc/Rgof.R | 5 Rgof-3.2.0/Rgof/inst/doc/Rgof.Rmd | 10 Rgof-3.2.0/Rgof/inst/doc/Rgof.html | 580 ++++++++++++++++-------- Rgof-3.2.0/Rgof/man/calcTS.Rd | 12 Rgof-3.2.0/Rgof/man/gof_adj_C1.Rd |only Rgof-3.2.0/Rgof/man/gof_adj_C2.Rd |only Rgof-3.2.0/Rgof/man/gof_power.Rd | 12 Rgof-3.2.0/Rgof/man/gof_power_C.Rd |only Rgof-3.2.0/Rgof/man/gof_test.Rd | 2 Rgof-3.2.0/Rgof/man/gof_test_C.Rd |only Rgof-3.2.0/Rgof/man/gof_test_adjusted_pvalue.Rd | 24 Rgof-3.2.0/Rgof/man/timecheck.Rd | 10 Rgof-3.2.0/Rgof/src/RcppExports.cpp | 104 +--- Rgof-3.2.0/Rgof/src/calcTS.cpp |only Rgof-3.2.0/Rgof/src/calcTS.h |only Rgof-3.2.0/Rgof/src/gof_adj_C.cpp |only Rgof-3.2.0/Rgof/src/gof_power_C.cpp |only Rgof-3.2.0/Rgof/src/gof_test_C.cpp |only Rgof-3.2.0/Rgof/vignettes/Rgof.Rmd | 10 56 files changed, 1003 insertions(+), 502 deletions(-)
Title: Various Methods for the Two Sample Problem
Description: The routine twosample_test() in this package runs the
two sample test using various test statistic. The p values are
found via permutation or large sample theory. The routine twosample_power() allows the
calculation of the power in various cases, and plot_power() draws the corresponding power graphs.
The routine run.studies allows a user to quickly study the power of a new method and
how it compares to some of the standard ones.
Author: Wolfgang Rolke [aut, cre]
Maintainer: Wolfgang Rolke <wolfgang.rolke@upr.edu>
Diff between R2sample versions 3.1.1 dated 2025-03-16 and 4.0.0 dated 2025-04-27
R2sample-3.1.1/R2sample/R/power_cont_R.R |only R2sample-3.1.1/R2sample/R/power_disc_R.R |only R2sample-3.1.1/R2sample/man/perm_test_cont.Rd |only R2sample-3.1.1/R2sample/man/perm_test_disc.Rd |only R2sample-3.1.1/R2sample/man/permute_disc.Rd |only R2sample-3.1.1/R2sample/man/power_cont.Rd |only R2sample-3.1.1/R2sample/man/power_cont_R.Rd |only R2sample-3.1.1/R2sample/man/power_disc.Rd |only R2sample-3.1.1/R2sample/man/power_disc_R.Rd |only R2sample-3.1.1/R2sample/man/ts_C.Rd |only R2sample-3.1.1/R2sample/man/ts_D.Rd |only R2sample-3.1.1/R2sample/src/perm_test_cont.cpp |only R2sample-3.1.1/R2sample/src/perm_test_disc.cpp |only R2sample-3.1.1/R2sample/src/permute_disc.cpp |only R2sample-3.1.1/R2sample/src/permute_disc.h |only R2sample-3.1.1/R2sample/src/power_cont.cpp |only R2sample-3.1.1/R2sample/src/power_disc.cpp |only R2sample-3.1.1/R2sample/src/teststatistics.cpp |only R2sample-3.1.1/R2sample/src/teststatistics.h |only R2sample-4.0.0/R2sample/DESCRIPTION | 6 R2sample-4.0.0/R2sample/MD5 | 76 +- R2sample-4.0.0/R2sample/NAMESPACE | 3 R2sample-4.0.0/R2sample/NEWS.md | 5 R2sample-4.0.0/R2sample/R/RcppExports.R | 170 ++---- R2sample-4.0.0/R2sample/R/case.studies.R | 8 R2sample-4.0.0/R2sample/R/powerR.R |only R2sample-4.0.0/R2sample/R/run.studies.R | 8 R2sample-4.0.0/R2sample/R/twosample_power.R | 188 +++---- R2sample-4.0.0/R2sample/R/twosample_test.R | 115 ++-- R2sample-4.0.0/R2sample/R/twosample_test_adjusted_pvalue.R | 165 ++---- R2sample-4.0.0/R2sample/data/power_studies_results.rda |binary R2sample-4.0.0/R2sample/inst/doc/R2sample.R | 15 R2sample-4.0.0/R2sample/inst/doc/R2sample.Rmd | 67 +- R2sample-4.0.0/R2sample/inst/doc/R2sample.html | 265 +++++----- R2sample-4.0.0/R2sample/man/TSw_disc.Rd | 18 R2sample-4.0.0/R2sample/man/gen_cont_noweights.Rd |only R2sample-4.0.0/R2sample/man/gen_cont_weights.Rd |only R2sample-4.0.0/R2sample/man/gen_disc.Rd |only R2sample-4.0.0/R2sample/man/gen_sim_data.Rd |only R2sample-4.0.0/R2sample/man/powerC.Rd |only R2sample-4.0.0/R2sample/man/powerR.Rd |only R2sample-4.0.0/R2sample/man/run.studies.Rd | 3 R2sample-4.0.0/R2sample/man/testC.Rd |only R2sample-4.0.0/R2sample/man/twosample_power.Rd | 6 R2sample-4.0.0/R2sample/man/twosample_test.Rd | 8 R2sample-4.0.0/R2sample/man/twosample_test_adjusted_pvalue.Rd | 8 R2sample-4.0.0/R2sample/src/RcppExports.cpp | 186 +++---- R2sample-4.0.0/R2sample/src/TSw_disc.cpp | 118 ++-- R2sample-4.0.0/R2sample/src/calcTS.cpp |only R2sample-4.0.0/R2sample/src/calcTS.h |only R2sample-4.0.0/R2sample/src/gen_sim_data.cpp |only R2sample-4.0.0/R2sample/src/gen_sim_data.h |only R2sample-4.0.0/R2sample/src/powerC.cpp |only R2sample-4.0.0/R2sample/src/test.cpp |only R2sample-4.0.0/R2sample/src/testC.cpp |only R2sample-4.0.0/R2sample/vignettes/R2sample.Rmd | 67 +- 56 files changed, 788 insertions(+), 717 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-04-21 1.0.2
2020-04-09 1.0.1
2019-05-12 1.0.0
2016-10-24 0.2.0
2015-09-16 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-07-18 0.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-06-14 1.4-1
2014-09-15 1.4-0
2014-08-11 1.3-9
2014-06-02 1.3-8
2013-04-18 1.3-7.1
2012-09-25 1.3-7
2012-02-22 1.3-6
2011-10-11 1.3-5
2011-03-07 1.3-4
2010-11-03 1.3-3
2010-09-08 1.3-2
2010-08-19 1.3-1
2010-08-16 1.3-0
2010-07-26 1.2-9
2010-06-18 1.2-8
2010-05-03 1.2-7
2010-03-01 1.2-6
2010-02-19 1.2-5
2010-01-26 1.2-4
2009-11-06 1.2-3
2009-09-21 1.2-2
2009-08-13 1.2-1
2009-07-21 1.2-0
2009-03-27 1.1-8
2008-12-16 1.1-7
2008-08-20 1.1-5
2008-06-09 1.1-3
2008-05-14 1.1-1
2008-02-11 1.0-6
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-08-01 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-03-29 0.9.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-01-21 1.1.0
2017-09-08 1.0.5
2017-01-20 1.0.4
2017-01-06 1.0.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-11-12 1.1.2
2022-09-18 1.1.1
2021-05-11 1.1.0
2019-03-07 1.0.3
Title: Distributed Trimmed Scores Regression for Handling Missing Data
Description: Provides functions for handling missing data using Distributed Trimmed Scores Regression and other imputation methods. It includes facilities for data imputation, evaluation metrics, and clustering analysis. It is designed to work in distributed computing environments to handle large datasets efficiently. The philosophy of the package is described in Guo G. (2024) <doi:10.1080/03610918.2022.2091779>.
Author: Guangbao Guo [aut, cre, cph] ,
Ruiling Niu [aut]
Maintainer: Guangbao Guo <ggb11111111@163.com>
Diff between DTSR versions 0.1.0 dated 2024-11-08 and 0.2.0 dated 2025-04-27
DESCRIPTION | 8 ++++---- MD5 | 7 ++++++- data |only man/Frogs.Rd |only man/abalone.Rd |only 5 files changed, 10 insertions(+), 5 deletions(-)