Rcpp Version 0.9.10
RcppGibbs.R File Reference
#include <gsl/gsl_rng.h>
#include <gsl/gsl_randist.h>
Include dependency graph for RcppGibbs.R:

Go to the source code of this file.

Functions

 suppressMessages (library(Rcpp)) suppressMessages(library(inline)) suppressMessages(library(compiler)) suppressMessages(library(rbenchmark)) fun<-function(x
 for (i=0;i< N;i++)

Variables

int N = as<int>(n)
int thn = as<int>(thin)
int i
int j
NumericMatrix mat (N, 2)
RNGScope scope
double x = 0
double y = 0

Function Documentation

for ( )

Definition at line 104 of file RcppGibbs.R.

suppressMessages ( library(Rcpp)  )

Definition at line 3 of file newApiExample.r.


Variable Documentation

int i
Examples:
ConvolveBenchmarks/convolve2_c.c, ConvolveBenchmarks/convolve3_cpp.cpp, ConvolveBenchmarks/convolve4_cpp.cpp, ConvolveBenchmarks/convolve7_c.c, ConvolveBenchmarks/exampleRCode.r, Misc/ifelseLooped.r, OpenMP/OpenMPandInline.r, RcppGibbs/RcppGibbs.R, RcppGibbs/timeRNGs.R, RcppInline/RcppInlineExample.r, RcppInline/RcppSimpleExample.r, RcppInline/RObject.r, and SugarPerformance/sugarBenchmarks.R.

Definition at line 96 of file RcppGibbs.R.

Referenced by Rcpp::sugar::Any< false, T >::apply(), Rcpp::sugar::Any< NA, T >::apply(), Rcpp::sugar::All< false, T >::apply(), Rcpp::sugar::All< NA, T >::apply(), Vector< RTYPE >::assign_object(), Rcpp::Module::class_names(), Rcpp::Module::classes_info(), Rcpp::Module::complete(), Rcpp::class_< Class >::complete(), convolve(), convolve10cpp(), convolve11cpp(), convolve12cpp(), convolve14cpp(), convolve2(), convolve3cpp(), convolve4cpp(), convolve5cpp(), convolve7(), convolve8cpp(), convolve9cpp(), Rcpp::DatetimeVector::DatetimeVector(), Rcpp::DateVector::DateVector(), Rcpp::detzcode(), Rcpp::detzcode64(), Vector< RTYPE >::erase_range__impl(), Vector< RTYPE >::erase_single__impl(), Rcpp::class_< Class >::fields(), Matrix< RTYPE >::fill_diag__dispatch(), Vector< RTYPE >::fill_dispatch(), for(), Rcpp::Module::functions_arity(), Rcpp::Module::functions_names(), traits::proxy_cache< EXPRSXP >::get(), traits::r_vector_cache< RTYPE >::get(), Rcpp::sugar::UpperTri< RTYPE, LHS_NA, LHS_T >::get(), Rcpp::sugar::LowerTri< RTYPE, LHS_NA, LHS_T >::get(), Rcpp::sugar::Sum< RTYPE, false, T >::get(), Rcpp::sugar::Sum< REALSXP, NA, T >::get(), Rcpp::sugar::Sum< RTYPE, NA, T >::get(), Rcpp::sugar::Cumsum< RTYPE, NA, T >::get(), Rcpp::internal::get_column(), Rcpp::Module::get_function_ptr(), Rcpp::class_< Class >::getConstructors(), Rcpp::class_< Class >::getMethods(), Rcpp::class_< Class >::has_default_constructor(), Vector< RTYPE >::import_expression(), Matrix< RTYPE >::import_matrix_expression(), Rcpp::DottedPair::insert(), Vector< RTYPE >::insert__impl(), Rcpp::class_< Class >::invoke(), Rcpp::class_< Class >::invoke_notvoid(), Rcpp::class_< Class >::invoke_void(), library(), Matrix< RTYPE >::Matrix(), Rcpp::class_< Class >::method_names(), Rcpp::class_< Class >::methods_arity(), Rcpp::class_< Class >::methods_voidness(), Rcpp::Date::mktime00(), Rcpp::class_< Class >::newInstance(), Vector< RTYPE >::offset(), Rcpp::DateVector::operator()(), Rcpp::DatetimeVector::operator()(), Rcpp::MatrixBase< RTYPE, NA, Diag_Maker< RTYPE, NA, T > >::operator()(), Rcpp::sugar::UpperTri< RTYPE, LHS_NA, LHS_T >::operator()(), Rcpp::sugar::LowerTri< RTYPE, LHS_NA, LHS_T >::operator()(), Rcpp::sugar::Diag_Maker< RTYPE, NA, T >::operator()(), Vector< RTYPE >::operator+=(), Matrix< RTYPE >::operator=(), Rcpp::DateVector::operator[](), Rcpp::DatetimeVector::operator[](), Rcpp::VectorBase< RTYPE, na, VECTOR >::iterator::operator[](), internal::RangeIndexer< RTYPE, VECTOR >::operator[](), MatrixRow< RTYPE >::iterator::operator[](), MatrixColumn< RTYPE >::operator[](), internal::LazyVector< Rcpp::Vector< RTYPE > >::operator[](), internal::LazyVector< VECTOR >::operator[](), Rcpp::Range::operator[](), Rcpp::sugar::Times_Vector_Primitive_nona< REALSXP, false, T >::operator[](), Rcpp::sugar::Times_Vector_Primitive_nona< RTYPE, false, T >::operator[](), Rcpp::sugar::Times_Vector_Primitive_nona< REALSXP, NA, T >::operator[](), Rcpp::sugar::Times_Vector_Primitive_nona< RTYPE, NA, T >::operator[](), Rcpp::sugar::Times_Vector_Primitive< REALSXP, false, T >::operator[](), Rcpp::sugar::Times_Vector_Primitive< RTYPE, false, T >::operator[](), Rcpp::sugar::Times_Vector_Primitive< REALSXP, NA, T >::operator[](), Rcpp::sugar::Times_Vector_Primitive< RTYPE, NA, T >::operator[](), Rcpp::sugar::Times_Vector_Vector< REALSXP, false, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Times_Vector_Vector< RTYPE, false, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Times_Vector_Vector< REALSXP, LHS_NA, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Times_Vector_Vector< RTYPE, LHS_NA, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Times_Vector_Vector< REALSXP, false, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Times_Vector_Vector< RTYPE, false, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Times_Vector_Vector< REALSXP, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Times_Vector_Vector< RTYPE, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Plus_Vector_Primitive_nona< REALSXP, false, T >::operator[](), Rcpp::sugar::Plus_Vector_Primitive_nona< RTYPE, false, T >::operator[](), Rcpp::sugar::Plus_Vector_Primitive_nona< REALSXP, NA, T >::operator[](), Rcpp::sugar::Plus_Vector_Primitive_nona< RTYPE, NA, T >::operator[](), Rcpp::sugar::Plus_Vector_Primitive< REALSXP, false, T >::operator[](), Rcpp::sugar::Plus_Vector_Primitive< RTYPE, false, T >::operator[](), Rcpp::sugar::Plus_Vector_Primitive< REALSXP, NA, T >::operator[](), Rcpp::sugar::Plus_Vector_Primitive< RTYPE, NA, T >::operator[](), Rcpp::sugar::Plus_Vector_Vector< REALSXP, false, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Plus_Vector_Vector< RTYPE, false, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Plus_Vector_Vector< REALSXP, LHS_NA, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Plus_Vector_Vector< RTYPE, LHS_NA, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Plus_Vector_Vector< REALSXP, false, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Plus_Vector_Vector< RTYPE, false, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Plus_Vector_Vector< REALSXP, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Plus_Vector_Vector< RTYPE, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Minus_Primitive_Vector< REALSXP, false, T >::operator[](), Rcpp::sugar::Minus_Primitive_Vector< RTYPE, false, T >::operator[](), Rcpp::sugar::Minus_Primitive_Vector< REALSXP, NA, T >::operator[](), Rcpp::sugar::Minus_Primitive_Vector< RTYPE, NA, T >::operator[](), Rcpp::sugar::Minus_Vector_Primitive< REALSXP, false, T >::operator[](), Rcpp::sugar::Minus_Vector_Primitive< RTYPE, false, T >::operator[](), Rcpp::sugar::Minus_Vector_Primitive< REALSXP, NA, T >::operator[](), Rcpp::sugar::Minus_Vector_Primitive< RTYPE, NA, T >::operator[](), Rcpp::sugar::Minus_Vector_Vector< REALSXP, false, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Minus_Vector_Vector< RTYPE, false, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Minus_Vector_Vector< REALSXP, LHS_NA, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Minus_Vector_Vector< RTYPE, LHS_NA, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Minus_Vector_Vector< REALSXP, false, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Minus_Vector_Vector< RTYPE, false, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Minus_Vector_Vector< REALSXP, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Minus_Vector_Vector< RTYPE, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Divides_Primitive_Vector< REALSXP, false, T >::operator[](), Rcpp::sugar::Divides_Primitive_Vector< RTYPE, false, T >::operator[](), Rcpp::sugar::Divides_Primitive_Vector< REALSXP, NA, T >::operator[](), Rcpp::sugar::Divides_Primitive_Vector< RTYPE, NA, T >::operator[](), Rcpp::sugar::Divides_Vector_Primitive< REALSXP, false, T >::operator[](), Rcpp::sugar::Divides_Vector_Primitive< RTYPE, false, T >::operator[](), Rcpp::sugar::Divides_Vector_Primitive< REALSXP, NA, T >::operator[](), Rcpp::sugar::Divides_Vector_Primitive< RTYPE, NA, T >::operator[](), Rcpp::sugar::Divides_Vector_Vector< REALSXP, false, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Divides_Vector_Vector< RTYPE, false, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Divides_Vector_Vector< REALSXP, LHS_NA, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Divides_Vector_Vector< RTYPE, LHS_NA, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Divides_Vector_Vector< REALSXP, false, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Divides_Vector_Vector< RTYPE, false, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Divides_Vector_Vector< REALSXP, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Divides_Vector_Vector< RTYPE, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Comparator_With_One_Value< RTYPE, Operator, false, T >::operator[](), Rcpp::sugar::Comparator_With_One_Value< RTYPE, Operator, NA, T >::operator[](), Rcpp::sugar::Comparator< RTYPE, Operator, false, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Comparator< RTYPE, Operator, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Nona< RTYPE, NA, Rcpp::Vector< RTYPE > >::operator[](), Rcpp::sugar::Nona< RTYPE, NA, VECTOR >::operator[](), Rcpp::sugar::Tail< RTYPE, NA, T >::operator[](), Rcpp::sugar::SeqLen::operator[](), Rcpp::sugar::Rev< RTYPE, NA, T >::operator[](), Rcpp::sugar::IsNa< RTYPE, NA, VEC_TYPE >::operator[](), Rcpp::sugar::IfElse_Primitive_Primitive< RTYPE, false, COND_T >::operator[](), Rcpp::sugar::IfElse_Primitive_Primitive< RTYPE, COND_NA, COND_T >::operator[](), Rcpp::sugar::IfElse_Vector_Primitive< RTYPE, false, COND_T, LHS_NA, LHS_T >::operator[](), Rcpp::sugar::IfElse_Vector_Primitive< RTYPE, COND_NA, COND_T, LHS_NA, LHS_T >::operator[](), Rcpp::sugar::IfElse_Primitive_Vector< RTYPE, false, COND_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::IfElse_Primitive_Vector< RTYPE, COND_NA, COND_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::IfElse< RTYPE, false, COND_T, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::IfElse< RTYPE, COND_NA, COND_T, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Head< RTYPE, NA, T >::operator[](), Rcpp::sugar::Vectorized_INTSXP< Func, NA, VEC >::operator[](), Rcpp::sugar::SugarMath_1< NA, OUT, int, T1, FunPtr >::operator[](), Rcpp::sugar::SugarMath_1< NA, OUT, U1, T1, FunPtr >::operator[](), Rcpp::Fast< VECTOR >::operator[](), Rcpp::sugar::SugarComplex< NA, OUT, T, FunPtr >::operator[](), Vec::operator[](), PiLeibniz(), Rcpp::class_< Class >::property_classes(), Rcpp::class_< Class >::property_names(), Rcpp::DottedPair::Proxy::Proxy(), Vector< RTYPE >::push_back__impl(), Vector< RTYPE >::push_back_name__impl(), Vector< RTYPE >::push_front__impl(), Vector< RTYPE >::push_front_name__impl(), traits::r_vector_cache< RTYPE >::ref(), Cache::ref(), Rcpp::DottedPair::remove(), Rcpp::DottedPair::replace(), Rcpp::sugar::Comparator_With_One_Value< RTYPE, Operator, NA, T >::rhs_is_not_na(), Rcpp::S4_CppOverloadedMethods< Class >::S4_CppOverloadedMethods(), Rcpp::timesub(), Rcpp::toString(), Rcpp::transtime(), Rcpp::tzload(), and Rcpp::tzparse().

return mat
Examples:
RcppGibbs/RcppGibbs.R.

Definition at line 113 of file RcppGibbs.R.

Examples:
RcppGibbs/timeRNGs.R.

Definition at line 99 of file RcppGibbs.R.

Referenced by setCurrentScope().

int thn = as<int>(thin)
Examples:
RcppGibbs/RcppGibbs.R.

Definition at line 94 of file RcppGibbs.R.

double x = 0
Examples:
OpenMP/OpenMPandInline.r, RcppGibbs/RcppGibbs.R, RcppGibbs/timeRNGs.R, RcppInline/external_pointer.r, RcppInline/RObject.r, and SugarPerformance/sugarBenchmarks.R.

Definition at line 102 of file RcppGibbs.R.

Referenced by Rcpp::sugar::unary_minus< CPLXSXP, NA >::apply(), Rcpp::sugar::unary_minus< RTYPE, false >::apply(), Rcpp::sugar::unary_minus< RTYPE, NA >::apply(), Rcpp::sugar::not_< CPLXSXP, NA >::apply(), Rcpp::sugar::not_< REALSXP, NA >::apply(), Rcpp::sugar::not_< RTYPE, NA >::apply(), Rcpp::sugar::negate< NA >::apply(), Rcpp::Environment::assign(), Vector< RTYPE >::assign(), Rcpp::clone(), Rcpp::internal::complex__asin(), Rcpp::internal::complex__atan(), Rcpp::stats::d_exp_0(), Rcpp::DataFrame::DataFrame(), Rcpp::dexp(), Rcpp::stats::dgamma_1(), Rcpp::Dimension::Dimension(), Rcpp::stats::dlnorm_0(), Rcpp::stats::dlnorm_1(), Rcpp::stats::dlogis_0(), Rcpp::stats::dlogis_1(), Rcpp::stats::dnorm_1(), Rcpp::stats::dweibull_1(), Rcpp::Environment::Environment(), for(), Rcpp::Function::Function(), Rcpp::Module::functions_arity(), Rcpp::sugar::sign__impl< false, RTYPE >::get(), Rcpp::sugar::sign__impl< NA, RTYPE >::get(), Rcpp::sugar::pow__impl< false, RTYPE, EXPONENT_TYPE >::get(), Rcpp::sugar::pow__impl< NA, RTYPE, typename Rcpp::traits::remove_const< EXPONENT_TYPE >::type >::get(), Rcpp::traits::get_na< CPLXSXP >(), Rcpp::internal::get_zero< CPLXSXP, Rcomplex >(), Rcpp::internal::SEXPstack::grow(), Rcpp::internal::grow__dispatch(), Rcpp::DottedPair::insert(), Rcpp::is_false(), Rcpp::is_na(), Rcpp::traits::is_na< CPLXSXP >(), Rcpp::traits::is_na< INTSXP >(), Rcpp::traits::is_na< LGLSXP >(), Rcpp::traits::is_na< REALSXP >(), Rcpp::traits::is_na< STRSXP >(), Rcpp::is_true(), Matrix< RTYPE >::Matrix(), Rcpp::internal::new_date_object(), Rcpp::internal::new_posixt_object(), Rcpp::noNA(), Rcpp::sugar::SingleLogicalResult< false, Any< false, T > >::operator bool(), Rcpp::Environment::Binding::operator T(), operator!(), operator-(), Rcpp::RObject::operator=(), Vector< RTYPE >::operator=(), Matrix< RTYPE >::operator=(), Rcpp::DataFrame::operator=(), Rcpp::sugar::Times_Vector_Primitive_nona< RTYPE, NA, T >::operator[](), Rcpp::sugar::Times_Vector_Primitive< RTYPE, NA, T >::operator[](), Rcpp::sugar::Plus_Vector_Primitive_nona< RTYPE, NA, T >::operator[](), Rcpp::sugar::Plus_Vector_Primitive< RTYPE, NA, T >::operator[](), Rcpp::sugar::Minus_Vector_Primitive< RTYPE, false, T >::operator[](), Rcpp::sugar::Minus_Vector_Primitive< RTYPE, NA, T >::operator[](), Rcpp::sugar::Minus_Vector_Vector< RTYPE, LHS_NA, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Minus_Vector_Vector< RTYPE, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Divides_Primitive_Vector< RTYPE, NA, T >::operator[](), Rcpp::sugar::Divides_Vector_Primitive< RTYPE, false, T >::operator[](), Rcpp::sugar::Divides_Vector_Primitive< RTYPE, NA, T >::operator[](), Rcpp::sugar::Divides_Vector_Vector< RTYPE, LHS_NA, LHS_T, false, RHS_T >::operator[](), Rcpp::sugar::Divides_Vector_Vector< RTYPE, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Comparator< RTYPE, Operator, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::IfElse_Primitive_Primitive< RTYPE, COND_NA, COND_T >::operator[](), Rcpp::sugar::IfElse_Vector_Primitive< RTYPE, COND_NA, COND_T, LHS_NA, LHS_T >::operator[](), Rcpp::sugar::IfElse_Primitive_Vector< RTYPE, COND_NA, COND_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::IfElse< RTYPE, COND_NA, COND_T, LHS_NA, LHS_T, RHS_NA, RHS_T >::operator[](), Rcpp::sugar::Vectorized_INTSXP< Func, NA, VEC >::operator[](), Rcpp::sugar::SugarMath_1< NA, OUT, int, T1, FunPtr >::operator[](), Rcpp::sugar::SugarMath_1< NA, OUT, U1, T1, FunPtr >::operator[](), Rcpp::sugar::SugarComplex< NA, OUT, T, FunPtr >::operator[](), Rcpp::stats::p_exp_0(), Rcpp::pexp(), Rcpp::stats::plogis_0(), Rcpp::stats::plogis_1(), Rcpp::stats::pnorm_0(), Rcpp::stats::pnorm_1(), Rcpp::DottedPair::Proxy::Proxy(), Rcpp::DottedPair::push_back(), Rcpp::stats::pweibull_1(), Rcpp::qexp(), Rcpp::r_cast(), Rcpp::internal::r_true_cast< CPLXSXP >(), Rcpp::internal::r_true_cast< EXPRSXP >(), Rcpp::internal::r_true_cast< INTSXP >(), Rcpp::internal::r_true_cast< LANGSXP >(), Rcpp::internal::r_true_cast< LGLSXP >(), Rcpp::internal::r_true_cast< LISTSXP >(), Rcpp::internal::r_true_cast< RAWSXP >(), Rcpp::internal::r_true_cast< REALSXP >(), Rcpp::internal::r_true_cast< STRSXP >(), Rcpp::internal::r_true_cast< VECSXP >(), Rcpp::internal::r_vector_start< CPLXSXP, Rcomplex >(), Rcpp::internal::r_vector_start< INTSXP, int >(), Rcpp::internal::r_vector_start< LGLSXP, int >(), Rcpp::internal::r_vector_start< RAWSXP, Rbyte >(), Rcpp::internal::r_vector_start< REALSXP, double >(), Rcpp::Reference::Reference(), Rcpp::DottedPair::remove(), Rcpp::rep(), Rcpp::DottedPair::replace(), Rcpp::sugar::Comparator_With_One_Value< RTYPE, Operator, NA, T >::rhs_is_not_na(), Rcpp::RObject::RObject(), Rcpp::S4::S4(), Rcpp::XPtr< T, Finalizer >::ProtectedProxy::set(), Rcpp::XPtr< T, Finalizer >::TagProxy::set(), Vector< RTYPE >::NamesProxy::set(), internal::generic_proxy< RTYPE >::set(), internal::string_proxy< RTYPE >::set(), Rcpp::sugar::SingleLogicalResult< false, Any< false, T > >::set(), Rcpp::DataFrame::set(), Rcpp::RObject::setSEXP(), suppressMessages(), Rcpp::wrap_extra_steps< Rcpp::Date >(), and Rcpp::wrap_extra_steps< Rcpp::Datetime >().

 All Classes Namespaces Files Functions Variables Typedefs Enumerator Friends Defines