Updated slides for 'Introduction to HPC with R'
As mentioned
yesterday,
I spent a few days last week in Japan as I had an opportunity to present the
Introduction to High-Performance Computing with R tutorial at the
Institute for Statistical Mathematics
in Tachikawa near Tokyo thanks to an invitation by
Junji Nakano.
An updated version of the presentations slides (with a few typos corrected)
is now available as is a
2-up handout version.
Compared to previous versions, and reflecting the fact that this was the
'all-day variant' of almost five hours of lectures, the following changes were made:
- the 'parallel computing' section was expanded further with discussion
of the recent R packages multicore, iterators, foreach, doNWS, doSNOW, doMPI;
-
a first discussion of GPU computing using the gputools package was added;
-
the section on 'out of memory computing' using ff, bigmemory and biglm (including
an example borrowed from Jay Emerson) reappeared in this longer version;
-
minor fixes and polishing throughout.
Comments and suggestions are, as always, appreciated.
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