Title: Track Estimation using YAPS (Yet Another Positioning Solver)
Description: Estimate tracks of animals tagged with acoustic transmitters. 'yaps' was introduced in 2017 as a transparent open-source tool to estimate positions of fish (and other aquatic animals) tagged with acoustic transmitters. Based on registrations of acoustic transmitters on hydrophones positioned in a fixed array, 'yaps' enables users to synchronize the collected data (i.e. correcting for drift in the internal clocks of the hydrophones/receivers) and subsequently to estimate tracks of the tagged animals. The paper introducing 'yaps' is available in open access at Baktoft, Gjelland, Økland & Thygesen (2017) <doi:10.1038/s41598-017-14278-z>. Also check out our cookbook with a completely worked through example at Baktoft, Gjelland, Økland, Rehage, Rodemann, Corujo, Viadero & Thygesen (2019) <DOI:10.1101/2019.12.16.877688>. Additional tutorials will eventually make their way onto the project website at <https://baktoft.github.io/yaps/>.
Author: Henrik Baktoft [cre, aut] (<https://orcid.org/0000-0002-3644-4960>),
Karl Gjelland [aut] (<https://orcid.org/0000-0003-4036-4207>),
Uffe H. Thygesen [aut] (<https://orcid.org/0000-0002-4311-6324>),
Finn Økland [aut] (<https://orcid.org/0000-0002-1938-5460>)
Maintainer: Henrik Baktoft <hba@aqua.dtu.dk>
Diff between yaps versions 1.2.4 dated 2021-02-10 and 1.2.5 dated 2021-04-13
DESCRIPTION | 6 MD5 | 77 +-- NEWS.md | 13 R/checkInp.R | 11 R/getBbox.R | 2 R/getInp.R | 4 R/plotBbox.R | 13 R/prepTmb.R | 74 +++ R/runYaps.R | 53 +- R/syncPlotters.R | 6 R/testYaps.R | 8 R/zzz.R | 10 README.md | 129 +++-- man/applySync.Rd | 7 man/checkInp.Rd | 7 man/checkInpSync.Rd | 7 man/examples/example-yaps_ssu1.R | 7 man/fineTuneSyncModel.Rd | 7 man/getBbox.Rd | 2 man/getInp.Rd | 7 man/getInpSync.Rd | 7 man/getSyncCoverage.Rd | 221 +++++----- man/getSyncModel.Rd | 7 man/getToaYaps.Rd | 7 man/runYaps.Rd | 13 man/testYaps.Rd | 7 src/dist_mat_3d_est.h | 7 src/nll_mix-dist.h | 6 src/nll_pingtype_rbi.h | 6 src/nll_pingtype_sbi.h | 1 src/nll_pingtype_sbi_double.h |only src/nll_ss_est.h | 5 src/yaps_track.h | 7 tests/figs/syncmodel-plotters/plotsyncmodelcheck-by-sync-bin-hydro.svg | 114 ----- tests/figs/syncmodel-plotters/plotsyncmodelresids-hydro.svg | 159 ------- tests/figs/syncmodel-plotters/plotsyncmodelresids-sync-tag.svg | 159 ------- tests/testthat/test-runYaps.R | 28 - tests/testthat/test_out_nloptr_ref.RData |binary tests/testthat/test_out_ref.RData |binary tests/testthat/yaps_out_ref.RData |binary 40 files changed, 459 insertions(+), 745 deletions(-)
Title: The Unifed Distribution
Description: Probability functions, family for glm() and Stan code for working with the unifed distribution (Quijano Xacur, 2019; <doi:10.1186/s40488-019-0102-6>).
Author: Oscar Alberto Quijano Xacur [aut,cre]
Maintainer: Oscar Alberto Quijano Xacur <oscar.quijano@use.startmail.com>
Diff between unifed versions 1.1.3 dated 2020-06-19 and 1.1.5 dated 2021-04-13
ChangeLog | 8 + DESCRIPTION | 10 +- MD5 | 27 +++--- R/car.insurance.R |only R/dunifed.R | 2 R/unifed.deviance.R | 2 build/vignette.rds |binary data |only inst/CITATION | 8 - inst/doc/introduction_unifed.R | 32 +++---- inst/doc/introduction_unifed.Rmd | 45 ++++------ inst/doc/introduction_unifed.html | 160 ++++++++++++++++++++------------------ man/car.insurance.Rd |only man/unifed.deviance.Rd | 2 vignettes/bibliography.bib | 4 vignettes/introduction_unifed.Rmd | 45 ++++------ 16 files changed, 177 insertions(+), 168 deletions(-)
Title: Transformation Models with Mixed Effects
Description: Likelihood-based estimation of mixed-effects transformation models using the Template
Model Builder (TMB, Kristensen et al., 2016, <doi:10.18637/jss.v070.i05>). The technical details
of transformation models are given in Hothorn et al. (2018, <doi:10.1111/sjos.12291>). Likelihood
contributions of exact, randomly censored (left, right, interval) and truncated observations are
supported. The random effects are assumed to be normally distributed on the scale of the
transformation function, the marginal likelihood is evaluated using the Laplace approximation,
and the gradients are calculated with automatic differentiation (AD).
Author: Balint Tamasi [aut, cre] (<https://orcid.org/0000-0002-2629-7362>),
Torsten Hothorn [ctb] (<https://orcid.org/0000-0001-8301-0471>)
Maintainer: Balint Tamasi <balint.tamasi@uzh.ch>
Diff between tramME versions 0.1.0 dated 2021-03-30 and 0.1.1 dated 2021-04-13
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- NEWS.md | 4 ++++ build/vignette.rds |binary inst/doc/tramME.pdf |binary src/tramTMB.cpp | 1 + 6 files changed, 13 insertions(+), 8 deletions(-)
Title: Steve's 'R Markdown' Templates
Description: These are my collection of 'R Markdown' templates, mostly for compilation to PDF.
These are useful for all things academic and professional, if you are using 'R Markdown'
for things like your CV or your articles and manuscripts.
Author: Steven V. Miller
Maintainer: Steven V. Miller <steven.v.miller@gmail.com>
Diff between stevetemplates versions 0.4.0 dated 2021-03-05 and 0.5.0 dated 2021-04-13
DESCRIPTION | 7 +- MD5 | 28 +++++++---- R/anonms.R | 2 R/article2.R | 7 ++ R/html_article.R |only R/word.R |only README.md | 16 ++++++ inst/rmarkdown/templates/article2/resources/template.tex | 36 +++++++++++++++ inst/rmarkdown/templates/article2/skeleton/skeleton.Rmd | 2 inst/rmarkdown/templates/cv/resources/template.tex | 6 +- inst/rmarkdown/templates/html_article |only inst/rmarkdown/templates/word |only man/anonms.Rd | 2 man/article2.Rd | 8 +++ man/html_article.Rd |only man/word.Rd |only 16 files changed, 95 insertions(+), 19 deletions(-)
More information about stevetemplates at CRAN
Permanent link
Title: Model-Based Boosting
Description: Functional gradient descent algorithm
(boosting) for optimizing general risk functions utilizing
component-wise (penalised) least squares estimates or regression
trees as base-learners for fitting generalized linear, additive
and interaction models to potentially high-dimensional data.
Models and algorithms are described in \doi{10.1214/07-STS242},
a hands-on tutorial is available from \doi{10.1007/s00180-012-0382-5}.
The package allows user-specified loss functions and base-learners.
Author: Torsten Hothorn [cre, aut] (<https://orcid.org/0000-0001-8301-0471>),
Peter Buehlmann [aut] (<https://orcid.org/0000-0002-1782-6015>),
Thomas Kneib [aut] (<https://orcid.org/0000-0003-3390-0972>),
Matthias Schmid [aut] (<https://orcid.org/0000-0002-0788-0317>),
Benjamin Hofner [aut] (<https://orcid.org/0000-0003-2810-3186>),
Fabian Otto-Sobotka [ctb] (<https://orcid.org/0000-0002-9874-1311>),
Fabian Scheipl [ctb] (<https://orcid.org/0000-0001-8172-3603>),
Andreas Mayr [ctb] (<https://orcid.org/0000-0001-7106-9732>)
Maintainer: Torsten Hothorn <Torsten.Hothorn@R-project.org>
Diff between mboost versions 2.9-4 dated 2020-12-10 and 2.9-5 dated 2021-04-13
DESCRIPTION | 13 MD5 | 69 +-- R/btree.R | 20 build/partial.rdb |binary build/vignette.rds |binary cleanup |only inst/NEWS.Rd | 14 inst/doc/SurvivalEnsembles.R | 1 inst/doc/SurvivalEnsembles.Rnw | 1 inst/doc/SurvivalEnsembles.pdf |binary inst/doc/mboost.R | 686 +++++++++++++++++++++++++++++++++- inst/doc/mboost.Rnw | 667 ++++++++++++++++++++++++++++++++- inst/doc/mboost.pdf |binary inst/doc/mboost_illustrations.pdf |binary inst/doc/mboost_tutorial.R | 1 inst/doc/mboost_tutorial.Rnw | 1 inst/doc/mboost_tutorial.pdf |binary man/Family.Rd | 22 - man/baselearners.Rd | 29 - man/blackboost.Rd | 7 man/confint.Rd | 2 man/cvrisk.Rd | 4 man/gamboost.Rd | 2 man/glmboost.Rd | 2 man/mboost_fit.Rd | 2 man/mboost_package.Rd | 5 man/methods.Rd | 4 man/plot.Rd | 2 man/stabsel.Rd | 2 man/survFit.Rd | 3 vignettes/SurvivalEnsembles.Rnw | 1 vignettes/SurvivalEnsembles.Rout.save | 40 + vignettes/mboost.Rnw | 667 ++++++++++++++++++++++++++++++++- vignettes/mboost.Rout.save | 16 vignettes/mboost_tutorial.Rnw | 1 vignettes/mboost_tutorial.Rout.save | 124 ++---- 36 files changed, 2169 insertions(+), 239 deletions(-)
Title: Multivariate and Propensity Score Matching with Balance
Optimization
Description: Provides functions for multivariate and propensity score matching
and for finding optimal balance based on a genetic search algorithm.
A variety of univariate and multivariate metrics to
determine if balance has been obtained are also provided. For
details, see the paper by Jasjeet Sekhon
(2007, <doi:10.18637/jss.v042.i07>).
Author: Jasjeet Singh Sekhon <jas.sekhon@yale.edu>
Maintainer: Jasjeet Singh Sekhon <jas.sekhon@yale.edu>
Diff between Matching versions 4.9-7 dated 2020-02-06 and 4.9-9 dated 2021-04-13
DESCRIPTION | 19 +++++++++++-------- MD5 | 22 +++++++++++----------- README.md | 4 ++-- inst/CITATION | 8 ++++---- man/GenMatch.Rd | 2 +- man/Match.Rd | 22 +++++++++++----------- man/MatchBalance.Rd | 18 +++++++++--------- man/Matchby.Rd | 22 +++++++++++----------- man/balanceUV.Rd | 4 ++-- man/ks.boot.Rd | 8 ++++---- man/qqstats.Rd | 4 ++-- src/matching.cc | 2 ++ 12 files changed, 70 insertions(+), 65 deletions(-)
Title: Kernel Regression Smoothing with Local or Global Plug-in
Bandwidth
Description: Kernel regression smoothing with adaptive local or global plug-in
bandwidth selection.
Author: Eva Herrmann <eherrmann@mathematik.tu-darmstadt.de> (F77 & S original);
Packaged for R and enhanced by Martin Maechler
Maintainer: Martin Maechler <maechler@stat.math.ethz.ch>
Diff between lokern versions 1.1-8.1 dated 2020-07-15 and 1.1-9 dated 2021-04-13
ChangeLog | 25 +++++++ DESCRIPTION | 8 +- MD5 | 33 +++++----- R/glkerns.R | 8 +- R/lokerns.R | 31 ++++++--- TODO | 6 + build |only man/KernS-methods.Rd | 24 +++++-- man/glkerns.Rd | 13 ++-- man/lokerns.Rd | 2 man/xSim.Rd | 2 src/auxkerns.f | 161 +++++++++++++++++++++++++++++++++------------------ src/glkerns.f | 97 ++++++++++++++++++------------ src/init.c | 23 ++++--- src/lokerns.f | 131 ++++++++++++++++++++++++----------------- src/monitor.c | 50 ++++++++++++--- tests/glk1.Rout.save | 12 +-- tests/lok1.Rout.save | 155 +++++++++---------------------------------------- 18 files changed, 432 insertions(+), 349 deletions(-)
Title: Presentation-Ready Data Summary and Analytic Result Tables
Description: Creates presentation-ready tables summarizing data
sets, regression models, and more. The code to create the tables is
concise and highly customizable. Data frames can be summarized with
any function, e.g. mean(), median(), even user-written functions.
Regression models are summarized and include the reference rows for
categorical variables. Common regression models, such as logistic
regression and Cox proportional hazards regression, are automatically
identified and the tables are pre-filled with appropriate column
headers.
Author: Daniel D. Sjoberg [aut, cre] (<https://orcid.org/0000-0003-0862-2018>),
Michael Curry [aut] (<https://orcid.org/0000-0002-0261-4044>),
Margie Hannum [aut] (<https://orcid.org/0000-0002-2953-0449>),
Joseph Larmarange [aut] (<https://orcid.org/0000-0001-7097-700X>),
Karissa Whiting [aut] (<https://orcid.org/0000-0002-4683-1868>),
Emily C. Zabor [aut] (<https://orcid.org/0000-0002-1402-4498>),
Esther Drill [ctb] (<https://orcid.org/0000-0002-3315-4538>),
Jessica Flynn [ctb] (<https://orcid.org/0000-0001-8310-6684>),
Jessica Lavery [ctb] (<https://orcid.org/0000-0002-2746-5647>),
Stephanie Lobaugh [ctb],
Gustavo Zapata Wainberg [ctb] (<https://orcid.org/0000-0002-2524-3637>)
Maintainer: Daniel D. Sjoberg <danield.sjoberg@gmail.com>
Diff between gtsummary versions 1.3.7 dated 2021-02-26 and 1.4.0 dated 2021-04-13
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gtsummary-1.4.0/gtsummary/tests/testthat/test-style_percent.R | 3 gtsummary-1.4.0/gtsummary/tests/testthat/test-style_pvalue.R | 3 gtsummary-1.4.0/gtsummary/tests/testthat/test-style_ratio.R | 8 gtsummary-1.4.0/gtsummary/tests/testthat/test-style_sigfig.R | 8 gtsummary-1.4.0/gtsummary/tests/testthat/test-tbl_cross.R | 65 gtsummary-1.4.0/gtsummary/tests/testthat/test-tbl_merge.R | 33 gtsummary-1.4.0/gtsummary/tests/testthat/test-tbl_regression.R | 43 gtsummary-1.4.0/gtsummary/tests/testthat/test-tbl_stack.R | 4 gtsummary-1.4.0/gtsummary/tests/testthat/test-tbl_strata.R |only gtsummary-1.4.0/gtsummary/tests/testthat/test-tbl_summary.R | 120 gtsummary-1.4.0/gtsummary/tests/testthat/test-tbl_summary_input_checks.R | 4 gtsummary-1.4.0/gtsummary/tests/testthat/test-tbl_survfit.R | 37 gtsummary-1.4.0/gtsummary/tests/testthat/test-tbl_survival.R | 29 gtsummary-1.4.0/gtsummary/tests/testthat/test-tbl_svysummary.R | 136 gtsummary-1.4.0/gtsummary/tests/testthat/test-tbl_uvregression.R | 97 gtsummary-1.4.0/gtsummary/tests/testthat/test-vetted_models-clogit.R | 50 gtsummary-1.4.0/gtsummary/tests/testthat/test-vetted_models-coxph.R | 56 gtsummary-1.4.0/gtsummary/tests/testthat/test-vetted_models-geeglm.R | 110 gtsummary-1.4.0/gtsummary/tests/testthat/test-vetted_models-glm.R | 102 gtsummary-1.4.0/gtsummary/tests/testthat/test-vetted_models-glmer.R | 65 gtsummary-1.4.0/gtsummary/tests/testthat/test-vetted_models-lm.R | 59 gtsummary-1.4.0/gtsummary/tests/testthat/test-vetted_models-lmer.R | 54 gtsummary-1.4.0/gtsummary/tests/testthat/test-vetted_models-survreg.R | 57 gtsummary-1.4.0/gtsummary/vignettes/gallery.Rmd | 187 gtsummary-1.4.0/gtsummary/vignettes/global_options.Rmd | 103 gtsummary-1.4.0/gtsummary/vignettes/gtsummary_definition.Rmd | 181 gtsummary-1.4.0/gtsummary/vignettes/inline_text.Rmd | 10 gtsummary-1.4.0/gtsummary/vignettes/rmarkdown.Rmd | 10 gtsummary-1.4.0/gtsummary/vignettes/tbl_regression.Rmd | 39 gtsummary-1.4.0/gtsummary/vignettes/tbl_summary.Rmd | 44 311 files changed, 22671 insertions(+), 25307 deletions(-)
Title: Utility Functions for Large-scale Data
Description: Utility functions for large-scale data. For now, package 'bigutilsr'
mainly includes functions for outlier detection and unbiased PCA projection.
Author: Florian Privé [aut, cre]
Maintainer: Florian Privé <florian.prive.21@gmail.com>
Diff between bigutilsr versions 0.3.3 dated 2020-10-15 and 0.3.4 dated 2021-04-13
DESCRIPTION | 9 ++++----- MD5 | 6 +++--- README.md | 2 +- tests/testthat/test-OGK.R | 1 + 4 files changed, 9 insertions(+), 9 deletions(-)
Title: Enhanced Fork-Based Parallelization
Description: Drop-in replacement for 'parallel::mclapply()' adding e.g.
tracebacks, crash dumps, retries, condition handling, improved seeding,
progress bars and faster inter process communication. Some of the internal
functions are also exported for other use: 'etry()' (extended try),
'copy2shm()/allocate_from_shm()' (copy to and allocate from POSIX shared
memory), 'char_map/map2char()' (split a character vector into its unique
elements and a mapping on these) and various semaphore related functions.
Author: Andreas Kersting [aut, cre, cph],
GfK SE [cph],
R Core team [ctb] ('etry()' and its print method borrow a lot from base
R)
Maintainer: Andreas Kersting <andreas.kersting@gfk.com>
Diff between bettermc versions 1.0.1 dated 2021-03-25 and 1.1.1 dated 2021-04-13
DESCRIPTION | 10 - MD5 | 60 ++++++----- NEWS.md | 26 +++++ R/compress_chars.R | 4 R/etry.R | 2 R/mclapply.R | 176 +++++++++++++++++++++++++++-------- R/sem.R | 4 R/vectors2shm.R | 26 ++--- R/zzz.R | 11 +- configure | 1 configure.win |only inst/WORDLIST | 3 man/char_map.Rd | 4 man/compress_chars.Rd | 4 man/copy2shm.Rd | 24 ++-- man/etry.Rd | 4 man/mclapply.Rd | 88 +++++++++++++---- man/sem.Rd | 4 man/semv.Rd | 4 src/Makevars.linux | 2 src/Makevars.macos |only src/Makevars.solaris | 2 src/Makevars.win |only src/copy2shm.c | 37 +++++-- src/copy2shm.c.windows |only src/include |only src/sem.c.windows |only src/semv.c.windows |only tests/testthat/test-copy2shm.R | 8 + tests/testthat/test-mclapply.R | 38 ++++--- tests/testthat/test-mclapply_retry.R | 48 +++++++++ tests/testthat/test-mclapply_seed.R | 21 ++++ tests/testthat/test-sem.R | 2 tests/testthat/test-semv.R | 3 34 files changed, 478 insertions(+), 138 deletions(-)
Title: National Statistical Office of Mongolia's Open Data API Handler
Description: National Statistical Office of Mongolia (NSO) is the national statistical service and an organization of Mongolian government. NSO provides open access to official data via its API <http://opendata.1212.mn/en/doc>. The package NSO1212 has functions for accessing the API service. The functions are compatible with the API v2.0 and get data sets and its detailed informations from the API.
Author: Makhgal Ganbold [aut, cre]
Maintainer: Makhgal Ganbold <makhgal@seas.num.edu.mn>
Diff between NSO1212 versions 1.1.0 dated 2020-05-13 and 1.2.0 dated 2021-04-13
DESCRIPTION | 13 +++----- MD5 | 32 ++++++++++---------- NAMESPACE | 1 NEWS | 6 +++ R/NSO1212-package.r | 4 +- R/all_tables.R | 29 +++++++++++++----- R/get_sector_info.R | 18 ++++++++--- R/get_subsector_info.R | 16 +++++++--- R/get_table.R | 71 ++++++++++++++++++++++++++++++++++++---------- R/get_table_info.R | 32 +++++++++++--------- README.md | 13 +++----- man/NSO1212.Rd | 4 +- man/all_tables.Rd | 15 +++++---- man/get_sector_info.Rd | 10 +++--- man/get_subsector_info.Rd | 8 +++-- man/get_table.Rd | 34 +++++++++++++++------- man/get_table_info.Rd | 24 +++++++-------- 17 files changed, 214 insertions(+), 116 deletions(-)
Title: Bayesian Inference of Non-Linear and Non-Gaussian State Space
Models
Description: Efficient methods for Bayesian inference of state space models
via particle Markov chain Monte Carlo (MCMC) and MCMC based on parallel
importance sampling type weighted estimators
(Vihola, Helske, and Franks, 2020, <doi:10.1111/sjos.12492>).
Gaussian, Poisson, binomial, negative binomial, and Gamma
observation densities and basic stochastic volatility models
with linear-Gaussian state dynamics,
as well as general non-linear Gaussian models and discretised
diffusion models are supported.
Author: Jouni Helske [aut, cre] (<https://orcid.org/0000-0001-7130-793X>),
Matti Vihola [aut] (<https://orcid.org/0000-0002-8041-7222>)
Maintainer: Jouni Helske <jouni.helske@iki.fi>
Diff between bssm versions 1.1.3-2 dated 2021-02-26 and 1.1.4 dated 2021-04-13
DESCRIPTION | 8 - MD5 | 59 ++++--- NEWS | 7 R/RcppExports.R | 4 R/loglik.R | 11 - R/models.R | 15 +- R/priors.R | 321 +++++++++++++++++++++---------------------- R/run_mcmc.R | 11 + build/vignette.rds |binary inst/doc/bssm.Rmd | 6 inst/doc/bssm.html | 18 +- inst/doc/growth_model.html | 9 - inst/doc/psi_pf.html | 14 - inst/doc/sde_model.Rmd | 8 - inst/doc/sde_model.html | 22 -- man/logLik.Rd | 38 ----- man/logLik.nongaussian.Rd |only man/logLik.ssm_nlg.Rd | 4 man/logLik.ssm_sde.Rd | 2 man/priors.Rd | 10 + man/run_mcmc_ng.Rd | 11 + man/svm.Rd | 15 +- src/R_milstein.cpp | 24 --- src/RcppExports.cpp | 21 -- src/milstein.cpp | 58 ------- src/milstein_functions.h | 8 - src/model_ssm_ung.cpp | 9 - tests/testthat/test_models.R | 3 vignettes/bssm.Rmd | 6 vignettes/bssm.bib | 2 vignettes/sde_model.Rmd | 8 - 31 files changed, 308 insertions(+), 424 deletions(-)
Title: Tidy Dataframes and Expressions with Statistical Details
Description: Utilities for producing dataframes with rich details for the
most common types of statistical approaches and tests: parametric,
nonparametric, robust, and Bayesian t-test, one-way ANOVA, correlation
analyses, contingency table analyses, and meta-analyses. The
functions are pipe-friendly and provide a consistent syntax to work
with tidy data. These dataframes additionally contain expressions with
statistical details, and can be used in graphing packages. This
package also forms the statistical processing backend for
'ggstatsplot'.
Author: Indrajeet Patil [cre, aut, cph]
(<https://orcid.org/0000-0003-1995-6531>, @patilindrajeets)
Maintainer: Indrajeet Patil <patilindrajeet.science@gmail.com>
Diff between statsExpressions versions 1.0.0 dated 2021-03-11 and 1.0.1 dated 2021-04-13
statsExpressions-1.0.0/statsExpressions/build/statsExpressions.pdf |only statsExpressions-1.0.1/statsExpressions/DESCRIPTION | 18 statsExpressions-1.0.1/statsExpressions/LICENSE | 4 statsExpressions-1.0.1/statsExpressions/MD5 | 155 statsExpressions-1.0.1/statsExpressions/NAMESPACE | 205 - statsExpressions-1.0.1/statsExpressions/NEWS.md | 636 +-- statsExpressions-1.0.1/statsExpressions/R/bf_extractor.R | 156 statsExpressions-1.0.1/statsExpressions/R/contingency_table.R | 535 +-- statsExpressions-1.0.1/statsExpressions/R/corr_test.R | 209 - statsExpressions-1.0.1/statsExpressions/R/data.R | 324 - statsExpressions-1.0.1/statsExpressions/R/global_vars.R | 68 statsExpressions-1.0.1/statsExpressions/R/helpers_easystats.R | 90 statsExpressions-1.0.1/statsExpressions/R/helpers_expr_templates.R | 813 ++-- statsExpressions-1.0.1/statsExpressions/R/meta_analysis.R | 254 - statsExpressions-1.0.1/statsExpressions/R/one_sample_test.R | 412 +- statsExpressions-1.0.1/statsExpressions/R/oneway_anova.R | 756 ++-- statsExpressions-1.0.1/statsExpressions/R/reexports.R | 94 statsExpressions-1.0.1/statsExpressions/R/statsExpressions-package.R | 49 statsExpressions-1.0.1/statsExpressions/R/two_sample_test.R | 590 +-- statsExpressions-1.0.1/statsExpressions/README.md | 1456 ++++---- statsExpressions-1.0.1/statsExpressions/build/vignette.rds |binary statsExpressions-1.0.1/statsExpressions/inst/CITATION | 17 statsExpressions-1.0.1/statsExpressions/inst/WORDLIST | 145 statsExpressions-1.0.1/statsExpressions/inst/doc/stats_details.R | 16 statsExpressions-1.0.1/statsExpressions/inst/doc/stats_details.Rmd | 390 +- statsExpressions-1.0.1/statsExpressions/inst/doc/stats_details.html | 1304 +++---- statsExpressions-1.0.1/statsExpressions/man/bf_extractor.Rd | 96 statsExpressions-1.0.1/statsExpressions/man/contingency_table.Rd | 298 - statsExpressions-1.0.1/statsExpressions/man/corr_test.Rd | 206 - statsExpressions-1.0.1/statsExpressions/man/expr_template.Rd | 248 - statsExpressions-1.0.1/statsExpressions/man/figures/README-anova_parametric1-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/README-anova_parametric2-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/README-anova_rob1-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/README-cont_tabs1-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/README-corr-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/README-corr2-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/README-custom_expr-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/README-ggpubr_anova-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/README-gof-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/README-metaanalysis-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/README-t_ggiraphExtra-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/README-t_one-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/README-t_two-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/README-t_two_ggpubr-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/README-t_two_paired1-1.png |binary statsExpressions-1.0.1/statsExpressions/man/figures/stats_reporting_format.png |binary statsExpressions-1.0.1/statsExpressions/man/meta_analysis.Rd | 13 statsExpressions-1.0.1/statsExpressions/man/one_sample_test.Rd | 258 - statsExpressions-1.0.1/statsExpressions/man/oneway_anova.Rd | 413 +- statsExpressions-1.0.1/statsExpressions/man/reexports.Rd | 64 statsExpressions-1.0.1/statsExpressions/man/statsExpressions-package.Rd | 21 statsExpressions-1.0.1/statsExpressions/man/tidy_model_effectsize.Rd | 36 statsExpressions-1.0.1/statsExpressions/man/tidy_model_parameters.Rd | 46 statsExpressions-1.0.1/statsExpressions/man/two_sample_test.Rd | 403 +- statsExpressions-1.0.1/statsExpressions/tests/spelling.R | 12 statsExpressions-1.0.1/statsExpressions/tests/testthat.R | 8 statsExpressions-1.0.1/statsExpressions/tests/testthat/_snaps/one_two_sample_dataframes.md | 88 statsExpressions-1.0.1/statsExpressions/tests/testthat/_snaps/t-dataframes.md | 88 statsExpressions-1.0.1/statsExpressions/tests/testthat/test-bf_extractor.R | 97 statsExpressions-1.0.1/statsExpressions/tests/testthat/test-contingency_table.R | 1706 ++++------ statsExpressions-1.0.1/statsExpressions/tests/testthat/test-corr_test.R | 609 +-- statsExpressions-1.0.1/statsExpressions/tests/testthat/test-grouped_dataframes.R | 90 statsExpressions-1.0.1/statsExpressions/tests/testthat/test-loop_execution.R | 124 statsExpressions-1.0.1/statsExpressions/tests/testthat/test-loop_execution_bayes.R | 219 - statsExpressions-1.0.1/statsExpressions/tests/testthat/test-meta_random_bayes.R | 151 statsExpressions-1.0.1/statsExpressions/tests/testthat/test-meta_random_parametric.R | 151 statsExpressions-1.0.1/statsExpressions/tests/testthat/test-meta_random_robust.R | 141 statsExpressions-1.0.1/statsExpressions/tests/testthat/test-one_sample.R | 737 ++-- statsExpressions-1.0.1/statsExpressions/tests/testthat/test-one_two_sample_dataframes.R | 124 statsExpressions-1.0.1/statsExpressions/tests/testthat/test-oneway_anova_bayes.R | 484 +- statsExpressions-1.0.1/statsExpressions/tests/testthat/test-oneway_anova_nonparametric.R | 566 +-- statsExpressions-1.0.1/statsExpressions/tests/testthat/test-oneway_anova_parametric.R | 812 ++-- statsExpressions-1.0.1/statsExpressions/tests/testthat/test-oneway_anova_robust.R | 364 +- statsExpressions-1.0.1/statsExpressions/tests/testthat/test-two_sample_bayes.R | 350 +- statsExpressions-1.0.1/statsExpressions/tests/testthat/test-two_sample_nonparametric.R | 442 +- statsExpressions-1.0.1/statsExpressions/tests/testthat/test-two_sample_parametric.R | 592 +-- statsExpressions-1.0.1/statsExpressions/tests/testthat/test-two_sample_robust.R | 594 +-- statsExpressions-1.0.1/statsExpressions/vignettes/stats_details.Rmd | 390 +- statsExpressions-1.0.1/statsExpressions/vignettes/web_only/dataframe_outputs.Rmd | 1102 +++--- 79 files changed, 10276 insertions(+), 10563 deletions(-)
More information about statsExpressions at CRAN
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Title: Linking Patient-Reported Outcomes Measures
Description: Perform scale linking to establish relationships between instruments
that measure similar constructs according to the PROsetta Stone methodology, as in Choi, Schalet, Cook, & Cella (2014) <doi:10.1037/a0035768>.
Author: Seung W. Choi [aut, cre] (<https://orcid.org/0000-0003-4777-5420>),
Sangdon Lim [aut] (<https://orcid.org/0000-0002-2988-014X>),
Benjamin D. Schalet [ctb],
Aaron J. Kaat [ctb],
David Cella [ctb]
Maintainer: Seung W. Choi <schoi@austin.utexas.edu>
Diff between PROsetta versions 0.2.1 dated 2020-11-25 and 0.3.0 dated 2021-04-13
PROsetta-0.2.1/PROsetta/vignettes/PROsetta_cache/html/alpha2_a29946f4f5d0cca3dc3e255562932092.RData |only PROsetta-0.2.1/PROsetta/vignettes/PROsetta_cache/html/alpha2_a29946f4f5d0cca3dc3e255562932092.rdb |only PROsetta-0.2.1/PROsetta/vignettes/PROsetta_cache/html/alpha2_a29946f4f5d0cca3dc3e255562932092.rdx |only PROsetta-0.2.1/PROsetta/vignettes/PROsetta_cache/html/alpha_0409ebb27b7b72ee7aac176ef3d5dd88.RData |only PROsetta-0.2.1/PROsetta/vignettes/PROsetta_cache/html/alpha_0409ebb27b7b72ee7aac176ef3d5dd88.rdb |only PROsetta-0.2.1/PROsetta/vignettes/PROsetta_cache/html/alpha_0409ebb27b7b72ee7aac176ef3d5dd88.rdx |only PROsetta-0.2.1/PROsetta/vignettes/PROsetta_cache/html/calib2_cbb4e7866403c21020e42df79fe1bde7.RData |only PROsetta-0.2.1/PROsetta/vignettes/PROsetta_cache/html/calib2_cbb4e7866403c21020e42df79fe1bde7.rdb |only PROsetta-0.2.1/PROsetta/vignettes/PROsetta_cache/html/calib2_cbb4e7866403c21020e42df79fe1bde7.rdx |only 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More information about mlr3spatiotempcv at CRAN
Permanent link
Title: Tools to Visualize, Manipulate, and Summarize MCMC Output
Description: Performs key functions for MCMC analysis using minimal code - visualizes, manipulates, and summarizes MCMC output. Functions support simple and straightforward subsetting of model parameters within the calls, and produce presentable and 'publication-ready' output. MCMC output may be derived from Bayesian model output fit with 'Stan', 'NIMBLE', 'JAGS', and other software.
Author: Casey Youngflesh [aut, cre] (<https://orcid.org/0000-0001-6343-3311>),
Christian Che-Castaldo [aut] (<https://orcid.org/0000-0002-7670-2178>),
Tyler Hardy [ctb]
Maintainer: Casey Youngflesh <caseyyoungflesh@gmail.com>
Diff between MCMCvis versions 0.15.0 dated 2021-03-17 and 0.15.1 dated 2021-04-13
DESCRIPTION | 6 +++--- MD5 | 16 ++++++++-------- NEWS.md | 5 +++++ R/MCMCdiag.R | 2 +- R/MCMCplot.R | 25 ++++++++++++++++++++----- inst/doc/MCMCvis.Rmd | 2 +- inst/doc/MCMCvis.html | 14 +++++++------- man/MCMCdiag.Rd | 2 +- vignettes/MCMCvis.Rmd | 2 +- 9 files changed, 47 insertions(+), 27 deletions(-)
Title: Exploration and Graphics for RivEr Trends Confidence Intervals
Description: Collection of functions to evaluate uncertainty of results from
water quality analysis using the Weighted Regressions on Time Discharge and
Season (WRTDS) method. This package is an add-on to the EGRET package that
performs the WRTDS analysis. The WRTDS modeling
method was initially introduced and discussed in Hirsch et al. (2010) <doi:10.1111/j.1752-1688.2010.00482.x>,
and expanded in Hirsch and De Cicco (2015) <doi:10.3133/tm4A10>. The
paper describing the uncertainty and confidence interval calculations
is Hirsch et al. (2015) <doi:10.1016/j.envsoft.2015.07.017>.
Author: Laura DeCicco [aut, cre] (<https://orcid.org/0000-0002-3915-9487>),
Robert Hirsch [aut] (<https://orcid.org/0000-0002-4534-075X>),
Jennifer Murphy [ctb]
Maintainer: Laura DeCicco <ldecicco@usgs.gov>
Diff between EGRETci versions 2.0.3 dated 2019-03-15 and 2.0.4 dated 2021-04-13
EGRETci-2.0.3/EGRETci/R/runGroupBoot.R |only EGRETci-2.0.4/EGRETci/DESCRIPTION | 15 EGRETci-2.0.4/EGRETci/MD5 | 80 +- EGRETci-2.0.4/EGRETci/NAMESPACE | 7 EGRETci-2.0.4/EGRETci/R/ciData.R | 5 EGRETci-2.0.4/EGRETci/R/kalman_bootstrapping.R |only EGRETci-2.0.4/EGRETci/R/plotCIs.R | 339 +++++++---- EGRETci-2.0.4/EGRETci/R/predictionIntervals.R |only EGRETci-2.0.4/EGRETci/R/runGroupsBoot.R |only EGRETci-2.0.4/EGRETci/R/runPairsBoot.R | 82 +- EGRETci-2.0.4/EGRETci/R/wBTCode.R | 297 +++++---- EGRETci-2.0.4/EGRETci/README.md | 10 EGRETci-2.0.4/EGRETci/build/partial.rdb |only EGRETci-2.0.4/EGRETci/build/vignette.rds |binary EGRETci-2.0.4/EGRETci/data/Choptank_dailyBootOut.RData |only EGRETci-2.0.4/EGRETci/inst/CITATION | 2 EGRETci-2.0.4/EGRETci/inst/doc/EGRETci.Rmd | 15 EGRETci-2.0.4/EGRETci/inst/doc/EGRETci.html | 386 +++++++----- EGRETci-2.0.4/EGRETci/inst/doc/Enhancements.R | 67 +- EGRETci-2.0.4/EGRETci/inst/doc/Enhancements.Rmd | 182 ++---- EGRETci-2.0.4/EGRETci/inst/doc/Enhancements.html | 480 +++++++--------- EGRETci-2.0.4/EGRETci/man/EGRETci-package.Rd | 2 EGRETci-2.0.4/EGRETci/man/blockSample.Rd | 24 EGRETci-2.0.4/EGRETci/man/bootAnnual.Rd | 21 EGRETci-2.0.4/EGRETci/man/ciBands.Rd | 12 EGRETci-2.0.4/EGRETci/man/ciCalculations.Rd | 42 + EGRETci-2.0.4/EGRETci/man/example_data.Rd | 1 EGRETci-2.0.4/EGRETci/man/figures |only EGRETci-2.0.4/EGRETci/man/kalman.Rd |only EGRETci-2.0.4/EGRETci/man/makeAnnualPI.Rd |only EGRETci-2.0.4/EGRETci/man/makeDailyPI.Rd |only EGRETci-2.0.4/EGRETci/man/makeMonthPI.Rd |only EGRETci-2.0.4/EGRETci/man/monthSeqToDec.Rd |only EGRETci-2.0.4/EGRETci/man/pVal.Rd | 10 EGRETci-2.0.4/EGRETci/man/plotConcHistBoot.Rd | 36 - EGRETci-2.0.4/EGRETci/man/plotFluxHistBoot.Rd | 39 - EGRETci-2.0.4/EGRETci/man/plotHistogramTrend.Rd | 46 - EGRETci-2.0.4/EGRETci/man/runGroupsBoot.Rd | 33 - EGRETci-2.0.4/EGRETci/man/runPairsBoot.Rd | 33 - EGRETci-2.0.4/EGRETci/man/saveEGRETci.Rd | 8 EGRETci-2.0.4/EGRETci/man/setForBoot.Rd | 25 EGRETci-2.0.4/EGRETci/man/trendSetUp.Rd | 25 EGRETci-2.0.4/EGRETci/man/wBT.Rd | 48 + EGRETci-2.0.4/EGRETci/tests/testthat/tests_boot_tests.R | 21 EGRETci-2.0.4/EGRETci/tests/testthat/tests_kalman.R |only EGRETci-2.0.4/EGRETci/vignettes/EGRETci.Rmd | 15 EGRETci-2.0.4/EGRETci/vignettes/Enhancements.Rmd | 182 ++---- 47 files changed, 1451 insertions(+), 1139 deletions(-)
Title: Colorblind-Friendly Color Maps (Lite Version)
Description: Color maps designed to improve graph readability for readers with
common forms of color blindness and/or color vision deficiency. The color
maps are also perceptually-uniform, both in regular form and also when
converted to black-and-white for printing. This is the 'lite' version of the
'viridis' package that also contains 'ggplot2' bindings for discrete and
continuous color and fill scales and can be found at
<https://cran.r-project.org/package=viridis>.
Author: Simon Garnier [aut, cre],
Noam Ross [ctb, cph],
Bob Rudis [ctb, cph],
Marco Sciaini [ctb, cph],
Antônio Pedro Camargo [ctb, cph],
Cédric Scherer [ctb, cph]
Maintainer: Simon Garnier <garnier@njit.edu>
Diff between viridisLite versions 0.3.0 dated 2018-02-01 and 0.4.0 dated 2021-04-13
viridisLite-0.3.0/viridisLite/data |only viridisLite-0.4.0/viridisLite/DESCRIPTION | 36 +- viridisLite-0.4.0/viridisLite/MD5 | 20 - viridisLite-0.4.0/viridisLite/NAMESPACE | 5 viridisLite-0.4.0/viridisLite/NEWS.md |only viridisLite-0.4.0/viridisLite/R/viridis.R | 152 +++++++---- viridisLite-0.4.0/viridisLite/R/zzz.R |only viridisLite-0.4.0/viridisLite/inst |only viridisLite-0.4.0/viridisLite/man/figures/logo.png |only viridisLite-0.4.0/viridisLite/man/figures/maps.png |only viridisLite-0.4.0/viridisLite/man/figures/viridis-scales.png |binary viridisLite-0.4.0/viridisLite/man/viridis.Rd | 84 +++--- viridisLite-0.4.0/viridisLite/man/viridis.map.Rd | 50 ++- viridisLite-0.4.0/viridisLite/tests/testthat/test-palettes.R | 40 ++ 14 files changed, 255 insertions(+), 132 deletions(-)
Title: 'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra
Library
Description: 'Armadillo' is a templated C++ linear algebra library (by Conrad
Sanderson) that aims towards a good balance between speed and ease of
use. Integer, floating point and complex numbers are supported, as
well as a subset of trigonometric and statistics functions. Various
matrix decompositions are provided through optional integration with
LAPACK and ATLAS libraries. The 'RcppArmadillo' package includes the
header files from the templated 'Armadillo' library. Thus users do
not need to install 'Armadillo' itself in order to use
'RcppArmadillo'. From release 7.800.0 on, 'Armadillo' is licensed
under Apache License 2; previous releases were under licensed as MPL
2.0 from version 3.800.0 onwards and LGPL-3 prior to that;
'RcppArmadillo' (the 'Rcpp' bindings/bridge to Armadillo) is licensed
under the GNU GPL version 2 or later, as is the rest of 'Rcpp'.
Armadillo requires a C++11 compiler.
Author: Dirk Eddelbuettel, Romain Francois, Doug Bates and Binxiang Ni
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppArmadillo versions 0.10.2.2.0 dated 2021-03-09 and 0.10.4.0.0 dated 2021-04-13
RcppArmadillo-0.10.2.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_syl_lyap.hpp |only RcppArmadillo-0.10.4.0.0/RcppArmadillo/ChangeLog | 19 RcppArmadillo-0.10.4.0.0/RcppArmadillo/DESCRIPTION | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/MD5 | 259 +- RcppArmadillo-0.10.4.0.0/RcppArmadillo/build/partial.rdb |binary RcppArmadillo-0.10.4.0.0/RcppArmadillo/build/vignette.rds |binary RcppArmadillo-0.10.4.0.0/RcppArmadillo/configure | 18 RcppArmadillo-0.10.4.0.0/RcppArmadillo/configure.ac | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/NEWS.Rd | 34 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/doc/RcppArmadillo-intro.pdf |binary RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/doc/RcppArmadillo-sparseMatrix.pdf |binary RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/Col_meat.hpp | 50 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/Cube_bones.hpp | 12 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/Cube_meat.hpp | 197 +- RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/MapMat_meat.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/Mat_bones.hpp | 16 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/Mat_meat.hpp | 265 +- RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/Proxy.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/Row_meat.hpp | 50 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/SizeCube_meat.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/SizeMat_meat.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/SpCol_meat.hpp | 14 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/SpMat_bones.hpp | 12 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/SpMat_meat.hpp | 182 - RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/SpRow_meat.hpp | 14 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/SpSubview_col_list_meat.hpp | 4 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/SpSubview_meat.hpp | 32 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/arma_config.hpp | 3 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/arma_rng.hpp | 540 ++++- RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/arma_version.hpp | 6 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/auxlib_bones.hpp | 105 - RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/auxlib_meat.hpp | 911 +++------- RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/compiler_setup.hpp | 6 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/config.hpp | 21 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/config.hpp.cmake |only RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/debug.hpp | 160 + RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/diagview_meat.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/diskio_bones.hpp | 6 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/diskio_meat.hpp | 416 ++++ RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/field_bones.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/field_meat.hpp | 100 - RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_as_scalar.hpp | 16 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_chol.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_det.hpp | 74 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_eig_gen.hpp | 14 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_eig_pair.hpp | 6 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_eig_sym.hpp | 12 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_eigs_gen.hpp | 12 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_eigs_sym.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_expmat.hpp | 7 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_hess.hpp | 4 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_inv.hpp | 42 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_log_det.hpp | 90 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_logmat.hpp | 6 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_lu.hpp | 4 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_mvnrnd.hpp | 12 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_norm.hpp | 193 -- RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_orth_null.hpp | 6 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_pinv.hpp | 37 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_polyfit.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_powmat.hpp | 59 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_princomp.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_qr.hpp | 6 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_qz.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_randg.hpp | 48 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_randn.hpp | 12 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_randu.hpp | 12 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_rank.hpp | 11 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_reshape.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_roots.hpp | 6 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_schur.hpp | 4 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_solve.hpp | 30 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_spsolve.hpp | 22 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_sqrtmat.hpp | 6 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_svd.hpp | 34 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_svds.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_sylvester.hpp |only RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_trimat_ind.hpp | 4 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_wishrnd.hpp | 32 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/glue_conv_meat.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/glue_histc_meat.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/glue_mvnrnd_meat.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/glue_polyfit_meat.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/glue_solve_meat.hpp | 41 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/glue_times_meat.hpp | 16 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/glue_toeplitz_meat.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/gmm_diag_meat.hpp | 28 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/gmm_full_meat.hpp | 28 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/newarp_SparseGenRealShiftSolve_meat.hpp | 5 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_chol_meat.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_cond_meat.hpp | 9 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_det_bones.hpp |only RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_det_meat.hpp |only RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_diagmat_meat.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_diagvec_meat.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_expmat_meat.hpp | 4 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_inv_bones.hpp | 32 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_inv_meat.hpp | 283 ++- RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_log_det_bones.hpp |only RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_log_det_meat.hpp |only RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_logmat_meat.hpp | 10 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_norm_bones.hpp | 18 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_norm_meat.hpp | 134 - RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_orth_null_meat.hpp | 28 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_pinv_bones.hpp | 4 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_pinv_meat.hpp | 165 - RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_powmat_bones.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_powmat_meat.hpp | 102 - RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_roots_meat.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_shift_meat.hpp | 4 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_sqrtmat_meat.hpp | 12 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_toeplitz_meat.hpp | 4 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_trimat_meat.hpp | 4 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/op_wishrnd_meat.hpp | 6 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/podarray_bones.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/podarray_meat.hpp | 10 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/running_stat_meat.hpp | 4 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/running_stat_vec_meat.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/sp_auxlib_meat.hpp | 66 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/spdiagview_meat.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/spop_diagmat_meat.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/spop_misc_meat.hpp | 2 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/spop_norm_bones.hpp |only RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/spop_norm_meat.hpp |only RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/spop_trimat_meat.hpp | 4 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/subview_cube_each_meat.hpp | 22 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/subview_cube_meat.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/subview_cube_slices_meat.hpp | 16 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/subview_each_meat.hpp | 44 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/subview_elem1_meat.hpp | 52 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/subview_elem2_meat.hpp | 42 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/subview_field_meat.hpp | 8 RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/subview_meat.hpp | 108 - RcppArmadillo-0.10.4.0.0/RcppArmadillo/inst/include/armadillo_bits/sympd_helper.hpp | 19 135 files changed, 3180 insertions(+), 2585 deletions(-)
Title: Nuclear Decay Data for Dosimetric Calculations - ICRP 107
Description: Nuclear Decay Data for Dosimetric Calculations from the
International Commission on Radiological Protection from ICRP
Publication 107. Ann. ICRP 38 (3). Eckerman, Keith and Endo, Akira 2008
<doi:10.1016/j.icrp.2008.10.004>
<https://www.icrp.org/publication.asp?id=ICRP%20Publication%20107>.
This is a database of the physical data needed in calculations of
radionuclide-specific protection and operational quantities. The
data is prescribed by the ICRP, the international authority on
radiation dose standards, for estimating dose from the intake of or
exposure to radionuclides in the workplace and the environment.
The database contains information on the half-lives, decay chains,
and yields and energies of radiations emitted in nuclear transformations
of 1252 radionuclides of 97 elements.
Author: Mark Hogue [aut, cre],
KF Eckerman [dtc, cph],
A Endo [dtc, cph]
Maintainer: Mark Hogue <mark.hogue.chp@gmail.com>
Diff between RadData versions 1.0.0 dated 2019-04-05 and 1.0.1 dated 2021-04-13
RadData-1.0.0/RadData/data/datalist |only RadData-1.0.1/RadData/DESCRIPTION | 13 +++++++------ RadData-1.0.1/RadData/MD5 | 19 ++++++++++--------- RadData-1.0.1/RadData/NEWS.md |only RadData-1.0.1/RadData/R/data.R | 2 +- RadData-1.0.1/RadData/README.md | 4 ++-- RadData-1.0.1/RadData/data/ICRP_07.NDX.rda |binary RadData-1.0.1/RadData/man/ICRP_07.BET.Rd | 6 ++++-- RadData-1.0.1/RadData/man/ICRP_07.NDX.Rd | 8 +++++--- RadData-1.0.1/RadData/man/ICRP_07.RAD.Rd | 6 ++++-- RadData-1.0.1/RadData/man/figures |only RadData-1.0.1/RadData/man/rad_codes.Rd | 6 ++++-- 12 files changed, 37 insertions(+), 27 deletions(-)
More information about promotionImpact at CRAN
Permanent link
Title: Modules to Import and Manipulate Data in 'Shiny'
Description: 'Shiny' modules to import data into an application or 'addin'
from various sources, and to manipulate them after that.
Author: Victor Perrier [aut, cre, cph],
Fanny Meyer [aut],
Zauad Shahreer Abeer [aut]
Maintainer: Victor Perrier <victor.perrier@dreamrs.fr>
Diff between datamods versions 1.1.2 dated 2021-03-27 and 1.1.3 dated 2021-04-13
DESCRIPTION | 6 MD5 | 62 - NAMESPACE | 218 +++--- NEWS.md | 35 R/doc.R | 46 - R/filter-data.R | 1082 +++++++++++++++--------------- R/import-copypaste.R | 300 ++++---- R/import-file.R | 518 +++++++------- R/import-googlesheets.R | 398 +++++------ R/import-modal.R | 788 +++++++++++----------- R/update-variables.R | 1298 ++++++++++++++++++------------------- R/utils-shiny.R | 356 +++++----- R/utils.R | 6 R/validation.R | 610 ++++++++--------- R/zzz.R | 4 inst/doc/i18n.Rmd | 194 ++--- inst/extdata/mtcars.csv | 66 - inst/i18n/fr.csv | 118 +-- man/filter-data.Rd | 372 +++++----- man/get_data_packages.Rd | 34 man/import-copypaste.Rd | 164 ++-- man/import-file.Rd | 166 ++-- man/import-globalenv.Rd | 220 +++--- man/import-googlesheets.Rd | 164 ++-- man/import-modal.Rd | 206 ++--- man/list_pkg_data.Rd | 42 - man/show_data.Rd | 144 ++-- man/update-variables.Rd | 178 ++--- tests/testthat.R | 8 tests/testthat/test-filter-data.R | 284 ++++---- tests/testthat/test-import-modal.R | 32 vignettes/i18n.Rmd | 194 ++--- 32 files changed, 4161 insertions(+), 4152 deletions(-)
Title: API Wrapper for 'Ipeadata'
Description: Allows direct access to the macroeconomic,
financial and regional database maintained by
Brazilian Institute for Applied Economic Research ('Ipea').
This R package uses the 'Ipeadata' API. For more information,
see <http://www.ipeadata.gov.br/>.
Author: Luiz Eduardo S. Gomes [aut, cre],
Jessyka A. P. Goltara [ctb]
Maintainer: Luiz Eduardo S. Gomes <gomes.leduardo@gmail.com>
Diff between ipeadatar versions 0.1.1 dated 2020-05-14 and 0.1.2 dated 2021-04-13
DESCRIPTION | 16 ++++++++-------- MD5 | 6 +++--- R/ipeadata_pkg.R | 7 +++++-- man/available_subjects.Rd | 3 +++ 4 files changed, 19 insertions(+), 13 deletions(-)
Title: Converting Transport Data from GTFS Format to GPS-Like Records
Description: Convert general transit feed specification (GTFS) data to global positioning system (GPS) records in 'data.table' format. It also has some functions to subset GTFS data in time and space and to convert both representations to simple feature format.
Author: Rafael H. M. Pereira [aut] (<https://orcid.org/0000-0003-2125-7465>),
Pedro R. Andrade [aut, cre] (<https://orcid.org/0000-0001-8675-4046>),
Joao Bazzo [aut] (<https://orcid.org/0000-0003-4536-5006>),
Marcin Stepniak [ctb],
Marcus Saraiva [ctb] (<https://orcid.org/0000-0001-6218-2338>),
Ipea - Institue for Applied Economic Research [cph, fnd]
Maintainer: Pedro R. Andrade <pedro.andrade@inpe.br>
Diff between gtfs2gps versions 1.4-0 dated 2021-03-29 and 1.4-1 dated 2021-04-13
gtfs2gps-1.4-0/gtfs2gps/NEWS.md |only gtfs2gps-1.4-0/gtfs2gps/inst/extdata/berlin.zip |only gtfs2gps-1.4-0/gtfs2gps/man/figures/gtfs2gps_hex.png |only gtfs2gps-1.4-0/gtfs2gps/man/filter_by_day.Rd |only gtfs2gps-1.4-0/gtfs2gps/man/remove_by_route_id.Rd |only gtfs2gps-1.4-0/gtfs2gps/vignettes/sao_small-DESKTOP-V07AVEN.zip |only gtfs2gps-1.4-1/gtfs2gps/DESCRIPTION | 8 gtfs2gps-1.4-1/gtfs2gps/MD5 | 70 +- gtfs2gps-1.4-1/gtfs2gps/NAMESPACE | 2 gtfs2gps-1.4-1/gtfs2gps/R/RcppExports.R | 6 gtfs2gps-1.4-1/gtfs2gps/R/filter_gtfs.R | 100 ---- gtfs2gps-1.4-1/gtfs2gps/R/gps_as_sflinestring.R | 45 - gtfs2gps-1.4-1/gtfs2gps/R/gtfs2gps.R | 187 +++---- gtfs2gps-1.4-1/gtfs2gps/R/gtfs_as_sf.R | 3 gtfs2gps-1.4-1/gtfs2gps/R/merge_gtfs_feeds.R | 16 gtfs2gps-1.4-1/gtfs2gps/R/mod_updates.R | 27 - gtfs2gps-1.4-1/gtfs2gps/R/read_gtfs.R | 3 gtfs2gps-1.4-1/gtfs2gps/R/write_gtfs.R | 10 gtfs2gps-1.4-1/gtfs2gps/R/zzz.R | 6 gtfs2gps-1.4-1/gtfs2gps/inst/doc/intro_to_gtfs2gps.R | 4 gtfs2gps-1.4-1/gtfs2gps/inst/doc/intro_to_gtfs2gps.Rmd | 4 gtfs2gps-1.4-1/gtfs2gps/inst/doc/intro_to_gtfs2gps.html | 236 +--------- gtfs2gps-1.4-1/gtfs2gps/inst/extdata/saopaulo.zip |binary gtfs2gps-1.4-1/gtfs2gps/man/cpp_snap_points.Rd | 5 gtfs2gps-1.4-1/gtfs2gps/man/filter_by_route_id.Rd | 5 gtfs2gps-1.4-1/gtfs2gps/man/filter_week_days.Rd | 3 gtfs2gps-1.4-1/gtfs2gps/man/gtfs2gps.Rd | 40 - gtfs2gps-1.4-1/gtfs2gps/man/merge_gtfs_feeds.Rd | 2 gtfs2gps-1.4-1/gtfs2gps/src/RcppExports.cpp | 9 gtfs2gps-1.4-1/gtfs2gps/src/snap_points.cpp | 60 +- gtfs2gps-1.4-1/gtfs2gps/tests/testthat/test_filter_gtfs.R | 39 - gtfs2gps-1.4-1/gtfs2gps/tests/testthat/test_gps_as_sflinestring.R | 5 gtfs2gps-1.4-1/gtfs2gps/tests/testthat/test_gtfs2gps.R | 62 -- gtfs2gps-1.4-1/gtfs2gps/tests/testthat/test_merge_gtfs_feeds.R | 13 gtfs2gps-1.4-1/gtfs2gps/tests/testthat/test_snap_points.R | 10 gtfs2gps-1.4-1/gtfs2gps/tests/testthat/test_write_gtfs.R | 4 gtfs2gps-1.4-1/gtfs2gps/vignettes/intro_to_gtfs2gps.Rmd | 4 gtfs2gps-1.4-1/gtfs2gps/vignettes/intro_to_gtfs2gps_files/figure-gfm/unnamed-chunk-6-1.png |binary gtfs2gps-1.4-1/gtfs2gps/vignettes/intro_to_gtfs2gps_files/figure-gfm/unnamed-chunk-7-1.png |binary 39 files changed, 299 insertions(+), 689 deletions(-)
Title: Exploring 'COVID'-19 Statistics
Description: Provides easy-to-use programming API to access real time and historical data of 'COVID'-19 cases, vaccine and therapeutics data, and a Shiny app to help users exploring the data. Fetching data using API provided by <https://disease.sh> .
Author: Guangchuang Yu [cre, aut, cph]
(<https://orcid.org/0000-0002-6485-8781>),
Tianzhi Wu [aut],
Erqiang Hu [ctb],
Patrick Tung [ctb],
Xijin Ge [ctb]
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Diff between nCov2019 versions 0.4.3 dated 2021-04-08 and 0.4.4 dated 2021-04-13
DESCRIPTION | 6 ++--- MD5 | 12 +++++++---- R/query.R | 28 ++++++++++++++++++++++---- inst/doc/nCov2019.html | 46 +++++++++++++++++++++---------------------- inst/shinyapp/app.R | 31 ++++++++++++++++------------ man/get_global_data.Rd |only man/get_history_data.Rd |only man/get_therapeutics_data.Rd |only man/get_vaccine_data.Rd |only 9 files changed, 76 insertions(+), 47 deletions(-)
Title: Shiny App. Idiograms with Marks and Karyotype Indices
Description: Plot idiograms of karyotypes, plasmids, circular chr. having a set of data.frames for chromosome data and optionally mark data. Two styles of chromosomes can be used: without or with visible chromatids (when not circular). Supports micrometers, cM and Mb or any unit. Three styles of centromeres are available: triangular, rounded and inProtein; and six styles of marks are available: square (squareLeft), dots, cM (cMLeft), cenStyle, upArrow (downArrow), exProtein (inProtein); its legend (label) can be drawn inline or to the right of karyotypes. Idiograms can also be plotted in concentric circles. It is possible to calculate chromosome indices by Levan et al. (1964) <doi:10.1111/j.1601-5223.1964.tb01953.x>, karyotype indices of Watanabe et al. (1999) <doi:10.1007/PL00013869> and Romero-Zarco (1986) <doi:10.2307/1221906> and classify chromosomes by morphology Guerra (1986) and Levan et al. (1964).
Author: Fernando Roa [aut, cre],
Mariana PC Telles [ctb]
Maintainer: Fernando Roa <froao@unal.edu.co>
Diff between idiogramFISH versions 2.0.2 dated 2021-03-04 and 2.0.3 dated 2021-04-13
idiogramFISH-2.0.2/idiogramFISH/inst/shinyApps/iBoard/local.R |only idiogramFISH-2.0.2/idiogramFISH/inst/shinyApps/iBoard/www/README2.html |only idiogramFISH-2.0.2/idiogramFISH/inst/shinyApps/iBoard/www/README2.md |only idiogramFISH-2.0.3/idiogramFISH/DESCRIPTION | 10 idiogramFISH-2.0.3/idiogramFISH/MD5 | 102 idiogramFISH-2.0.3/idiogramFISH/NEWS.md | 12 idiogramFISH-2.0.3/idiogramFISH/R/genBankReadIF.R | 118 idiogramFISH-2.0.3/idiogramFISH/R/makedfMarkColor.R | 7 idiogramFISH-2.0.3/idiogramFISH/R/makedfMarkColorMycolors.R | 1 idiogramFISH-2.0.3/idiogramFISH/R/namesToColumns.R | 9 idiogramFISH-2.0.3/idiogramFISH/R/plotIdiograms.R | 105 idiogramFISH-2.0.3/idiogramFISH/R/runBoard.R | 23 idiogramFISH-2.0.3/idiogramFISH/README.md | 48 idiogramFISH-2.0.3/idiogramFISH/build/vignette.rds |binary idiogramFISH-2.0.3/idiogramFISH/inst/doc/AVignette.R | 48 idiogramFISH-2.0.3/idiogramFISH/inst/doc/AVignette.Rmd | 48 idiogramFISH-2.0.3/idiogramFISH/inst/doc/index.R | 2 idiogramFISH-2.0.3/idiogramFISH/inst/doc/index.Rmd | 6 idiogramFISH-2.0.3/idiogramFISH/inst/doc/index.html | 31 idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/memory.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/obserColumnMod.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/obserDataframes.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/obserNuccore.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/obserPlot.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/obserPosButtons.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/obserPresets.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/obserSwap.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/outputDataframes.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/outputLogCode.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/outputMenu.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/outputNuccore.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/outputPanels.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/outputPlot.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/outputTabs.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/outputTabsetpanels.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/presetVals.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/reactiveV.R |only idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/server.R | 2258 ---------- idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/ui.R | 187 idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/www/DESCRIPTION | 9 idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/www/README2.Rmd | 13 idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/www/man/figures/cranmanualbookdown.svg | 2 idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/www/man/figures/cranversion.svg | 4 idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/www/man/figures/develmanualvignette.svg | 2 idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/www/man/figures/gitbadge.svg | 2 idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/www/man/figures/pkgdownver.svg | 2 idiogramFISH-2.0.3/idiogramFISH/inst/shinyApps/iBoard/www/mystyle.css |only idiogramFISH-2.0.3/idiogramFISH/man/citrusSize.Rd | 128 idiogramFISH-2.0.3/idiogramFISH/man/figures/README-example-1.png |binary idiogramFISH-2.0.3/idiogramFISH/man/figures/README-example2-1.png |binary idiogramFISH-2.0.3/idiogramFISH/man/figures/README-unnamed-chunk-18-1.png |binary idiogramFISH-2.0.3/idiogramFISH/man/figures/README-unnamed-chunk-19-1.png |binary idiogramFISH-2.0.3/idiogramFISH/man/figures/circular.png |binary idiogramFISH-2.0.3/idiogramFISH/man/figures/cranmanualbookdown.svg | 2 idiogramFISH-2.0.3/idiogramFISH/man/figures/cranversion.svg | 4 idiogramFISH-2.0.3/idiogramFISH/man/figures/gitbadge.svg | 2 idiogramFISH-2.0.3/idiogramFISH/man/figures/manual.svg | 2 idiogramFISH-2.0.3/idiogramFISH/man/figures/shiny.jpg |binary idiogramFISH-2.0.3/idiogramFISH/man/genBankReadIF.Rd | 4 idiogramFISH-2.0.3/idiogramFISH/man/namesToColumns.Rd | 21 idiogramFISH-2.0.3/idiogramFISH/man/plotIdiograms.Rd | 236 - idiogramFISH-2.0.3/idiogramFISH/vignettes/AVignette.Rmd | 48 idiogramFISH-2.0.3/idiogramFISH/vignettes/index.Rmd | 6 63 files changed, 635 insertions(+), 2867 deletions(-)
Title: 'AWS' Java 'SDK' for R
Description: Make the compiled Java modules of the Amazon Web Services ('AWS') 'SDK' available to be used in downstream R packages interacting with 'AWS'. See <https://aws.amazon.com/sdk-for-java> for more information on the 'AWS' 'SDK' for Java.
Author: Gergely Daroczi <daroczig@rapporter.net>
Maintainer: Gergely Daroczi <daroczig@rapporter.net>
Diff between AWR versions 1.11.189 dated 2017-09-07 and 1.11.189-1 dated 2021-04-13
AWR-1.11.189-1/AWR/DESCRIPTION | 17 ++++--- AWR-1.11.189-1/AWR/MD5 | 14 +++-- AWR-1.11.189-1/AWR/NAMESPACE | 9 ++- AWR-1.11.189-1/AWR/R/check.R |only AWR-1.11.189-1/AWR/R/zzz.R | 73 ++++++------------------------ AWR-1.11.189-1/AWR/README.md | 99 +++++++++++++++++++++++++++++++++++------ AWR-1.11.189-1/AWR/man |only AWR-1.11.189/AWR/java |only 8 files changed, 126 insertions(+), 86 deletions(-)
Title: Data Sets for Keith McNulty's Handbook of Regression Modeling in
People Analytics
Description: Data sets for statistical inference modeling related to People Analytics.
Contains various data sets from the book 'Handbook of Regression Modeling in People Analytics'
by Keith McNulty (2020).
Author: Keith McNulty [aut, cre] (<https://orcid.org/0000-0002-2332-1654>)
Maintainer: Keith McNulty <keith.mcnulty@gmail.com>
Diff between peopleanalyticsdata versions 0.2.0 dated 2021-02-16 and 0.2.1 dated 2021-04-13
DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ NEWS.md | 6 +++++- R/data-health_insurance.R | 8 ++++---- data/charity_donation.rda |binary data/health_insurance.rda |binary man/health_insurance.Rd | 8 ++++---- 7 files changed, 22 insertions(+), 18 deletions(-)
More information about peopleanalyticsdata at CRAN
Permanent link
Title: Download Map Data from GISCO API - Eurostat
Description: Tools to download data from the GISCO
(Geographic Information System of the Commission) Eurostat database
<https://ec.europa.eu/eurostat/web/gisco>. Global and European map data available.
This package is in no way officially related to or endorsed by Eurostat.
Author: Diego Hernangómez [aut, cre, cph]
(<https://orcid.org/0000-0001-8457-4658>),
EuroGeographics [cph] (for the administrative boundaries.),
Vincent Arel-Bundock [cph] (<https://orcid.org/0000-0003-2042-7063>,
for the gisco_countrycode dataset.)
Maintainer: Diego Hernangómez <diego.hernangomezherrero@gmail.com>
Diff between giscoR versions 0.2.2 dated 2020-11-23 and 0.2.4 dated 2021-04-13
giscoR-0.2.2/giscoR/inst/tinytest/test_download.R |only giscoR-0.2.2/giscoR/inst/tinytest/test_gisco_get_healthcare.R |only giscoR-0.2.2/giscoR/man/figures/README-example-1.png |only giscoR-0.2.2/giscoR/man/figures/README-example-2.png |only giscoR-0.2.4/giscoR/DESCRIPTION | 16 giscoR-0.2.4/giscoR/MD5 | 97 +- giscoR-0.2.4/giscoR/NEWS.md | 14 giscoR-0.2.4/giscoR/R/giscoR-package.R | 62 - giscoR-0.2.4/giscoR/R/gisco_attributions.R | 65 - giscoR-0.2.4/giscoR/R/gisco_bulk_download.R | 104 +- giscoR-0.2.4/giscoR/R/gisco_data.R | 276 +++--- giscoR-0.2.4/giscoR/R/gisco_get.R | 433 +++++----- giscoR-0.2.4/giscoR/R/gisco_get_airports.R | 53 - giscoR-0.2.4/giscoR/R/gisco_get_grid.R | 83 + giscoR-0.2.4/giscoR/R/gisco_get_healthcare.R | 61 - giscoR-0.2.4/giscoR/R/gisco_get_units.R | 175 ++-- giscoR-0.2.4/giscoR/R/utils_downloads.R | 281 +++--- giscoR-0.2.4/giscoR/R/utils_names.R | 57 - giscoR-0.2.4/giscoR/README.md | 186 +++- giscoR-0.2.4/giscoR/build |only giscoR-0.2.4/giscoR/data/gisco_countrycode.rda |binary giscoR-0.2.4/giscoR/inst/CITATION | 12 giscoR-0.2.4/giscoR/inst/doc |only giscoR-0.2.4/giscoR/inst/pkgdown |only giscoR-0.2.4/giscoR/inst/schemaorg.json |only giscoR-0.2.4/giscoR/inst/tinytest/test_1_apidownloads.R |only giscoR-0.2.4/giscoR/inst/tinytest/test_download_utils.R |only giscoR-0.2.4/giscoR/inst/tinytest/test_gisco_attributions.R | 2 giscoR-0.2.4/giscoR/inst/tinytest/test_gisco_bulk_download.R | 2 giscoR-0.2.4/giscoR/inst/tinytest/test_gisco_get_airports.R | 2 giscoR-0.2.4/giscoR/inst/tinytest/test_gisco_get_coastallines.R | 2 giscoR-0.2.4/giscoR/inst/tinytest/test_gisco_get_communes.R | 2 giscoR-0.2.4/giscoR/inst/tinytest/test_gisco_get_countries.R | 4 giscoR-0.2.4/giscoR/inst/tinytest/test_gisco_get_grid.R | 2 giscoR-0.2.4/giscoR/inst/tinytest/test_gisco_get_lau.R | 2 giscoR-0.2.4/giscoR/inst/tinytest/test_gisco_get_nuts.R | 2 giscoR-0.2.4/giscoR/inst/tinytest/test_gisco_get_units.R | 2 giscoR-0.2.4/giscoR/inst/tinytest/test_gisco_get_urban_audit.R | 2 giscoR-0.2.4/giscoR/man/giscoR-package.Rd | 41 giscoR-0.2.4/giscoR/man/gisco_attributions.Rd | 42 giscoR-0.2.4/giscoR/man/gisco_bulk_download.Rd | 52 - giscoR-0.2.4/giscoR/man/gisco_check_access.Rd | 6 giscoR-0.2.4/giscoR/man/gisco_coastallines.Rd | 52 - giscoR-0.2.4/giscoR/man/gisco_countries.Rd | 29 giscoR-0.2.4/giscoR/man/gisco_countrycode.Rd | 52 - giscoR-0.2.4/giscoR/man/gisco_db.Rd | 2 giscoR-0.2.4/giscoR/man/gisco_get.Rd | 191 ++-- giscoR-0.2.4/giscoR/man/gisco_get_airports.Rd | 23 giscoR-0.2.4/giscoR/man/gisco_get_grid.Rd | 39 giscoR-0.2.4/giscoR/man/gisco_get_healthcare.Rd | 25 giscoR-0.2.4/giscoR/man/gisco_get_units.Rd | 117 +- giscoR-0.2.4/giscoR/man/gisco_nuts.Rd | 37 giscoR-0.2.4/giscoR/man/tgs00026.Rd | 20 giscoR-0.2.4/giscoR/vignettes |only 54 files changed, 1623 insertions(+), 1104 deletions(-)
Title: API Client for the 'ClimMob' Platform
Description: API client for 'ClimMob', an open source software for experimental
crowdsourcing citizen science under the 'tricot' approach <https://climmob.net/>.
Developed by van Etten et al. (2019) <doi:10.1017/S0014479716000739>, it turns the
research paradigm on its head; instead of a few researchers designing complicated
trials to compare several technologies in search of the best solutions for the
target environment, it enables many participants to carry out reasonably simple
experiments that taken together can offer even more information.
'ClimMobTools' enables project managers to deep explore and analyse their
'ClimMob' data in R.
Author: Kauê de Sousa [aut, cre] (<https://orcid.org/0000-0002-7571-7845>),
Jacob van Etten [aut] (<https://orcid.org/0000-0001-7554-2558>),
Brandon Madriz [ctb] (API Client implementation)
Maintainer: Kauê de Sousa <kaue.desousa@inn.no>
Diff between ClimMobTools versions 0.3.7 dated 2021-03-23 and 0.3.9 dated 2021-04-13
DESCRIPTION | 21 ++++++------ MD5 | 28 +++++++++------- NAMESPACE | 1 NEWS.md | 14 +++++++- R/AAA-getDataCM.R | 22 ++++++------- R/ClimMobTools.R | 2 + R/getProjectProgress.R |only R/getProjectsCM.R | 76 ++++++++++++++++++++++++++++++++++++---------- inst/doc/Overview.R | 9 ++--- inst/doc/Overview.Rmd | 13 +++---- inst/doc/Overview.html | 13 +++---- man/ClimMobTools.Rd | 15 +++++---- man/getDataCM.Rd | 15 ++++++--- man/getProjectProgress.Rd |only man/getProjectsCM.Rd | 23 ++++++++++--- vignettes/Overview.Rmd | 13 +++---- 16 files changed, 172 insertions(+), 93 deletions(-)
Title: Database Interface and 'MariaDB' Driver
Description: Implements a 'DBI'-compliant interface to 'MariaDB'
(<https://mariadb.org/>) and 'MySQL' (<https://www.mysql.com/>)
databases.
Author: Kirill Müller [aut, cre] (<https://orcid.org/0000-0002-1416-3412>),
Jeroen Ooms [aut] (<https://orcid.org/0000-0002-4035-0289>),
David James [aut],
Saikat DebRoy [aut],
Hadley Wickham [aut],
Jeffrey Horner [aut],
R Consortium [fnd],
RStudio [cph]
Maintainer: Kirill Müller <krlmlr+r@mailbox.org>
Diff between RMariaDB versions 1.1.0 dated 2021-01-07 and 1.1.1 dated 2021-04-13
RMariaDB-1.1.0/RMariaDB/src/workarounds |only RMariaDB-1.1.1/RMariaDB/DESCRIPTION | 8 RMariaDB-1.1.1/RMariaDB/MD5 | 293 +++++++++++++++++- RMariaDB-1.1.1/RMariaDB/NEWS.md | 35 +- RMariaDB-1.1.1/RMariaDB/src/Makevars.in | 2 RMariaDB-1.1.1/RMariaDB/src/Makevars.win | 2 RMariaDB-1.1.1/RMariaDB/src/MariaRow.cpp | 10 RMariaDB-1.1.1/RMariaDB/src/MariaRow.h | 1 RMariaDB-1.1.1/RMariaDB/src/result.cpp | 1 RMariaDB-1.1.1/RMariaDB/src/vendor |only RMariaDB-1.1.1/RMariaDB/tests/testthat/test-queries.R | 12 11 files changed, 339 insertions(+), 25 deletions(-)
Title: Coloured Formatting for Columns
Description: Provides 'pillar' and 'colonnade' generics designed
for formatting columns of data using the full range of colours
provided by modern terminals.
Author: Kirill Müller [aut, cre],
Hadley Wickham [aut],
RStudio [cph]
Maintainer: Kirill Müller <krlmlr+r@mailbox.org>
Diff between pillar versions 1.5.1 dated 2021-03-05 and 1.6.0 dated 2021-04-13
DESCRIPTION | 13 MD5 | 242 ++++++++------- NAMESPACE | 68 ++++ NEWS.md | 38 ++ R/char.R |only R/ctl_colonnade.R | 57 ++- R/ctl_compound.R | 8 R/ctl_new_pillar.R | 3 R/ctl_pillar.R | 5 R/ctl_pillar_component.R | 2 R/deprecated.R | 6 R/dim.R | 2 R/empty-data.R | 12 R/extent.R | 13 R/glimpse.R | 4 R/multi.R | 22 - R/num.R |only R/ornament.R | 8 R/pillar-package.R | 2 R/scientific.R | 36 +- R/shaft-.R | 119 +++++-- R/shaft-simple.R | 17 - R/sigfig.R | 203 ++++++++++-- R/styles.R | 7 R/tbl-format-header.R | 22 - R/tbl-format-setup.R | 13 R/tbl-format.R | 2 R/tbl.R | 2 R/type-sum.R | 15 R/type.R | 34 +- R/utils.R | 52 ++- R/vctr.R |only R/vctrs.R | 11 R/zzz.R | 31 + build/vignette.rds |binary inst/WORDLIST | 35 +- inst/doc/debugme.html | 9 inst/doc/digits.R |only inst/doc/digits.Rmd |only inst/doc/digits.html |only inst/doc/extending.R | 2 inst/doc/extending.Rmd | 6 inst/doc/extending.html | 38 +- inst/doc/numbers.R |only inst/doc/numbers.Rmd |only inst/doc/numbers.html |only inst/doc/printing.R | 20 - inst/doc/printing.Rmd | 2 inst/doc/printing.html | 53 +-- man/align.Rd | 4 man/char.Rd |only man/ctl_new_pillar.Rd | 3 man/deprecated.Rd | 2 man/format_type_sum.Rd | 24 - man/new_pillar.Rd | 6 man/new_pillar_shaft.Rd | 11 man/num.Rd |only man/pillar-package.Rd | 2 man/pillar_shaft.Rd | 16 - man/type_sum.Rd | 2 tests/testthat/_snaps/ctl_colonnade.md | 427 ++++++++++++++++++++------- tests/testthat/_snaps/ctl_colonnade_1.md | 266 ++++++++-------- tests/testthat/_snaps/ctl_colonnade_2.md | 282 ++++++++--------- tests/testthat/_snaps/ctl_new_pillar.md | 5 tests/testthat/_snaps/format_asis.md | 3 tests/testthat/_snaps/format_character.md | 44 -- tests/testthat/_snaps/format_decimal.md | 31 - tests/testthat/_snaps/format_factor.md | 6 tests/testthat/_snaps/format_integer.md | 9 tests/testthat/_snaps/format_integer64.md | 78 ++-- tests/testthat/_snaps/format_list.md | 9 tests/testthat/_snaps/format_lubridate.md | 2 tests/testthat/_snaps/format_multi.md | 220 ------------- tests/testthat/_snaps/format_multi_fuzz.md | 190 +++--------- tests/testthat/_snaps/format_multi_fuzz_2.md | 207 +++---------- tests/testthat/_snaps/format_numeric.md | 44 +- tests/testthat/_snaps/format_rowid.md | 3 tests/testthat/_snaps/format_scientific.md | 41 +- tests/testthat/_snaps/format_time.md | 3 tests/testthat/_snaps/glimpse.md | 10 tests/testthat/_snaps/num.md |only tests/testthat/_snaps/ornament.md | 12 tests/testthat/_snaps/tbl-format-body.md | 10 tests/testthat/_snaps/title.md | 15 tests/testthat/_snaps/type_sum.md | 21 - tests/testthat/_snaps/vctr.md |only tests/testthat/helper-foo-tbl.R | 11 tests/testthat/helper-methods.R |only tests/testthat/helper-output.R | 2 tests/testthat/helper-size-sum.R |only tests/testthat/helper-tbl-sum.R |only tests/testthat/helper-type-sum.R | 62 +-- tests/testthat/helper-unknown-rows.R | 27 + tests/testthat/test-ctl_colonnade.R | 100 +++--- tests/testthat/test-ctl_colonnade_1.R | 30 - tests/testthat/test-ctl_colonnade_2.R | 30 - tests/testthat/test-ctl_new_pillar.R | 6 tests/testthat/test-distribute.R | 3 tests/testthat/test-format_asis.R | 6 tests/testthat/test-format_character.R | 38 +- tests/testthat/test-format_date.R | 4 tests/testthat/test-format_decimal.R | 48 +-- tests/testthat/test-format_factor.R | 8 tests/testthat/test-format_integer.R | 10 tests/testthat/test-format_integer64.R | 20 - tests/testthat/test-format_list.R | 10 tests/testthat/test-format_list_of.R | 10 tests/testthat/test-format_logical.R | 4 tests/testthat/test-format_lubridate.R | 6 tests/testthat/test-format_multi.R | 194 +++++++----- tests/testthat/test-format_multi_fuzz.R | 30 - tests/testthat/test-format_multi_fuzz_2.R | 30 - tests/testthat/test-format_numeric.R | 18 - tests/testthat/test-format_rowid.R | 6 tests/testthat/test-format_scientific.R | 23 - tests/testthat/test-format_survival.R | 8 tests/testthat/test-format_time.R | 14 tests/testthat/test-glimpse.R | 11 tests/testthat/test-num.R |only tests/testthat/test-obj-sum.R | 2 tests/testthat/test-ornament.R | 16 - tests/testthat/test-tbl-format-header.R | 3 tests/testthat/test-tbl-format-setup.R | 2 tests/testthat/test-tbl-format.R | 27 + tests/testthat/test-title.R | 14 tests/testthat/test-type_sum.R | 19 - tests/testthat/test-vctr.R |only tests/testthat/test-zzx-format_character.R | 4 vignettes/digits.Rmd |only vignettes/extending.Rmd | 6 vignettes/numbers.Rmd |only vignettes/printing.Rmd | 2 132 files changed, 2153 insertions(+), 1953 deletions(-)
Title: Calculation of Covariance Between Markers for Half-Sib Families
Description: The theoretical covariance between pairs of markers is calculated
from either paternal haplotypes and maternal linkage disequilibrium (LD) or
vise versa. A genetic map is required. Grouping of markers is based on the
correlation matrix and a representative marker is suggested for each group.
Employing the correlation matrix, optimal sample size can be derived for
association studies based on a SNP-BLUP approach.
The implementation relies on paternal half-sib families and biallelic
markers. If maternal half-sib families are used, the roles of sire/dam are
swapped. Multiple families can be considered.
Wittenburg, Bonk, Doschoris, Reyer (2020) "Design of Experiments for
Fine-Mapping Quantitative Trait Loci in Livestock Populations"
<doi:10.1186/s12863-020-00871-1>.
Carlson, Eberle, Rieder, Yi, Kruglyak, Nickerson (2004) "Selecting a
maximally informative set of single-nucleotide polymorphisms for association
analyses using linkage disequilibrium" <doi:10.1086/381000>.
Author: Dörte Wittenburg [aut, cre],
Michael Doschoris [aut],
Jan Klosa [ctb]
Maintainer: Dörte Wittenburg <wittenburg@fbn-dummerstorf.de>
Diff between hscovar versions 0.4.0 dated 2020-08-06 and 0.4.2 dated 2021-04-13
DESCRIPTION | 14 ++++++------ MD5 | 33 ++++++++++++++-------------- NEWS.md | 4 +++ R/covmat.R | 60 ++++++++++++++++++++++++++-------------------------- R/functions.R | 18 +++++++++------ R/powercalc.R | 14 ++++++------ R/tagSNP.R | 8 +++++- R/testdata.R | 5 +--- build |only man/CovMat.Rd | 43 ++++++++++++++++++------------------- man/H.sire.Rd | 4 ++- man/matLD.Rd | 4 ++- man/pos.chr.Rd | 4 ++- man/pwr.normtest.Rd | 6 ++--- man/pwr.snpblup.Rd | 6 ++--- man/simpleM.Rd | 2 - man/tagSNP.Rd | 8 +++++- man/testdata.Rd | 5 +--- 18 files changed, 130 insertions(+), 108 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-06-13 0.1.8
Title: Light Gradient Boosting Machine
Description: Tree based algorithms can be improved by introducing boosting frameworks.
'LightGBM' is one such framework, based on Ke, Guolin et al. (2017) <https://papers.nips.cc/paper/6907-lightgbm-a-highly-efficient-gradient-boosting-decision>.
This package offers an R interface to work with it.
It is designed to be distributed and efficient with the following advantages:
1. Faster training speed and higher efficiency.
2. Lower memory usage.
3. Better accuracy.
4. Parallel learning supported.
5. Capable of handling large-scale data.
In recognition of these advantages, 'LightGBM' has been widely-used in many winning solutions of machine learning competitions.
Comparison experiments on public datasets suggest that 'LightGBM' can outperform existing boosting frameworks on both efficiency and accuracy, with significantly lower memory consumption. In addition, parallel experiments suggest that in certain circumstances, 'LightGBM' can achieve a linear speed-up in training time by using multiple machines.
Author: Guolin Ke [aut, cre],
Damien Soukhavong [aut],
James Lamb [aut],
Qi Meng [aut],
Thomas Finley [aut],
Taifeng Wang [aut],
Wei Chen [aut],
Weidong Ma [aut],
Qiwei Ye [aut],
Tie-Yan Liu [aut],
Yachen Yan [ctb],
Microsoft Corporation [cph],
Dropbox, Inc. [cph],
Jay Loden [cph],
Dave Daeschler [cph],
Giampaolo Rodola [cph],
Alberto Ferreira [ctb],
Daniel Lemire [ctb],
Victor Zverovich [cph],
IBM Corporation [ctb]
Maintainer: Guolin Ke <guolin.ke@microsoft.com>
Diff between lightgbm versions 3.2.0 dated 2021-03-22 and 3.2.1 dated 2021-04-13
DESCRIPTION | 8 ++++---- MD5 | 22 +++++++++++----------- README.md | 10 +++++----- configure | 18 +++++++++--------- configure.ac | 2 +- src/include/LightGBM/config.h | 2 +- src/include/LightGBM/utils/chunked_array.hpp | 2 +- src/network/socket_wrapper.hpp | 2 +- src/treelearner/linear_tree_learner.cpp | 2 +- src/treelearner/serial_tree_learner.cpp | 9 +++++---- src/treelearner/serial_tree_learner.h | 2 +- tests/testthat/test_basic.R | 9 +++++++-- 12 files changed, 47 insertions(+), 41 deletions(-)
Title: API Client for Fantasy Football League Platforms
Description: Helps access various Fantasy Football APIs by handling
authentication and rate-limiting, forming appropriate calls, and
returning tidy dataframes which can be easily connected to other data
sources.
Author: Tan Ho [aut, cre],
Tony ElHabr [ctb],
Joe Sydlowski [ctb]
Maintainer: Tan Ho <tan@tanho.ca>
Diff between ffscrapr versions 1.3.0 dated 2021-03-07 and 1.4.0 dated 2021-04-13
ffscrapr-1.3.0/ffscrapr/R/dp_import.R |only ffscrapr-1.3.0/ffscrapr/man/figures/logo-no-gradient.png |only ffscrapr-1.3.0/ffscrapr/man/figures/logo-no-hexfill.png |only ffscrapr-1.3.0/ffscrapr/tests/testthat/test-dp_import.R |only ffscrapr-1.4.0/ffscrapr/DESCRIPTION | 49 - ffscrapr-1.4.0/ffscrapr/MD5 | 162 +++-- ffscrapr-1.4.0/ffscrapr/NAMESPACE | 14 ffscrapr-1.4.0/ffscrapr/NEWS.md | 25 ffscrapr-1.4.0/ffscrapr/R/0_cache.R | 6 ffscrapr-1.4.0/ffscrapr/R/0_generics.R | 52 + ffscrapr-1.4.0/ffscrapr/R/1_import_dp.R |only ffscrapr-1.4.0/ffscrapr/R/1_import_nflfastr.R |only ffscrapr-1.4.0/ffscrapr/R/espn__helpers.R | 12 ffscrapr-1.4.0/ffscrapr/R/espn_scoring.R | 23 ffscrapr-1.4.0/ffscrapr/R/espn_scoringhistory.R |only ffscrapr-1.4.0/ffscrapr/R/espn_starterpositions.R |only ffscrapr-1.4.0/ffscrapr/R/flea_scoringhistory.R |only ffscrapr-1.4.0/ffscrapr/R/flea_starterpositions.R |only ffscrapr-1.4.0/ffscrapr/R/mfl_connect.R | 1 ffscrapr-1.4.0/ffscrapr/R/mfl_draft.R | 11 ffscrapr-1.4.0/ffscrapr/R/mfl_playerscores.R | 66 +- ffscrapr-1.4.0/ffscrapr/R/mfl_scoring.R | 4 ffscrapr-1.4.0/ffscrapr/R/mfl_scoringhistory.R |only ffscrapr-1.4.0/ffscrapr/R/mfl_starterpositions.R |only ffscrapr-1.4.0/ffscrapr/R/mfl_transactions.R | 7 ffscrapr-1.4.0/ffscrapr/R/sleeper_league.R | 3 ffscrapr-1.4.0/ffscrapr/R/sleeper_playerscores.R | 4 ffscrapr-1.4.0/ffscrapr/R/sleeper_scoring.R | 8 ffscrapr-1.4.0/ffscrapr/R/sleeper_scoringhistory.R |only ffscrapr-1.4.0/ffscrapr/R/sleeper_starterpositions.R |only ffscrapr-1.4.0/ffscrapr/R/sleeper_transactions.R | 4 ffscrapr-1.4.0/ffscrapr/R/sysdata.rda |only ffscrapr-1.4.0/ffscrapr/R/zzz.R | 18 ffscrapr-1.4.0/ffscrapr/README.md | 16 ffscrapr-1.4.0/ffscrapr/build/vignette.rds |binary ffscrapr-1.4.0/ffscrapr/inst/doc/espn_basics.R | 6 ffscrapr-1.4.0/ffscrapr/inst/doc/espn_basics.Rmd | 6 ffscrapr-1.4.0/ffscrapr/inst/doc/espn_basics.html | 73 +- ffscrapr-1.4.0/ffscrapr/inst/doc/espn_getendpoint.R | 6 ffscrapr-1.4.0/ffscrapr/inst/doc/espn_getendpoint.Rmd | 28 ffscrapr-1.4.0/ffscrapr/inst/doc/espn_getendpoint.html | 31 - ffscrapr-1.4.0/ffscrapr/inst/doc/ffscrapr_caching.html | 9 ffscrapr-1.4.0/ffscrapr/inst/doc/ffscrapr_scoringhistory.R |only ffscrapr-1.4.0/ffscrapr/inst/doc/ffscrapr_scoringhistory.Rmd |only ffscrapr-1.4.0/ffscrapr/inst/doc/ffscrapr_scoringhistory.html |only ffscrapr-1.4.0/ffscrapr/inst/doc/fleaflicker_basics.R | 6 ffscrapr-1.4.0/ffscrapr/inst/doc/fleaflicker_basics.Rmd | 6 ffscrapr-1.4.0/ffscrapr/inst/doc/fleaflicker_basics.html | 89 +-- ffscrapr-1.4.0/ffscrapr/inst/doc/fleaflicker_getendpoint.R | 6 ffscrapr-1.4.0/ffscrapr/inst/doc/fleaflicker_getendpoint.Rmd | 6 ffscrapr-1.4.0/ffscrapr/inst/doc/fleaflicker_getendpoint.html | 9 ffscrapr-1.4.0/ffscrapr/inst/doc/mfl_basics.R | 6 ffscrapr-1.4.0/ffscrapr/inst/doc/mfl_basics.Rmd | 6 ffscrapr-1.4.0/ffscrapr/inst/doc/mfl_basics.html | 103 +-- ffscrapr-1.4.0/ffscrapr/inst/doc/mfl_getendpoint.R | 6 ffscrapr-1.4.0/ffscrapr/inst/doc/mfl_getendpoint.Rmd | 7 ffscrapr-1.4.0/ffscrapr/inst/doc/mfl_getendpoint.html | 25 ffscrapr-1.4.0/ffscrapr/inst/doc/sleeper_basics.R | 6 ffscrapr-1.4.0/ffscrapr/inst/doc/sleeper_basics.Rmd | 6 ffscrapr-1.4.0/ffscrapr/inst/doc/sleeper_basics.html | 89 +-- ffscrapr-1.4.0/ffscrapr/inst/doc/sleeper_getendpoint.R | 6 ffscrapr-1.4.0/ffscrapr/inst/doc/sleeper_getendpoint.Rmd | 6 ffscrapr-1.4.0/ffscrapr/inst/doc/sleeper_getendpoint.html | 27 ffscrapr-1.4.0/ffscrapr/man/dp_cleannames.Rd | 2 ffscrapr-1.4.0/ffscrapr/man/dp_playerids.Rd | 2 ffscrapr-1.4.0/ffscrapr/man/dp_values.Rd | 2 ffscrapr-1.4.0/ffscrapr/man/ff_connect.Rd | 2 ffscrapr-1.4.0/ffscrapr/man/ff_playerscores.Rd | 9 ffscrapr-1.4.0/ffscrapr/man/ff_scoring.Rd | 2 ffscrapr-1.4.0/ffscrapr/man/ff_scoringhistory.Rd |only ffscrapr-1.4.0/ffscrapr/man/ff_starter_positions.Rd |only ffscrapr-1.4.0/ffscrapr/man/ffscrapr-package.Rd | 77 +- ffscrapr-1.4.0/ffscrapr/man/figures/ffscrapr.svg | 287 ++++------ ffscrapr-1.4.0/ffscrapr/man/figures/logo.png |binary ffscrapr-1.4.0/ffscrapr/man/mfl_connect.Rd | 3 ffscrapr-1.4.0/ffscrapr/man/nflfastr_rosters.Rd |only ffscrapr-1.4.0/ffscrapr/man/nflfastr_weekly.Rd |only ffscrapr-1.4.0/ffscrapr/man/parse_raw_rds.Rd |only ffscrapr-1.4.0/ffscrapr/tests/testthat/setup.R | 6 ffscrapr-1.4.0/ffscrapr/tests/testthat/test-ff_playerscores.R | 1 ffscrapr-1.4.0/ffscrapr/tests/testthat/test-ff_rosters.R | 2 ffscrapr-1.4.0/ffscrapr/tests/testthat/test-ff_scoringhistory.R |only ffscrapr-1.4.0/ffscrapr/tests/testthat/test-ff_starterpositions.R |only ffscrapr-1.4.0/ffscrapr/tests/testthat/test-ff_starters.R | 2 ffscrapr-1.4.0/ffscrapr/tests/testthat/test-ff_transactions.R | 4 ffscrapr-1.4.0/ffscrapr/tests/testthat/test-import_dp.R |only ffscrapr-1.4.0/ffscrapr/tests/testthat/test-import_nflfastr.R |only ffscrapr-1.4.0/ffscrapr/vignettes/espn_basics.Rmd | 6 ffscrapr-1.4.0/ffscrapr/vignettes/espn_getendpoint.Rmd | 28 ffscrapr-1.4.0/ffscrapr/vignettes/ffscrapr_scoringhistory.Rmd |only ffscrapr-1.4.0/ffscrapr/vignettes/fleaflicker_basics.Rmd | 6 ffscrapr-1.4.0/ffscrapr/vignettes/fleaflicker_getendpoint.Rmd | 6 ffscrapr-1.4.0/ffscrapr/vignettes/mfl_basics.Rmd | 6 ffscrapr-1.4.0/ffscrapr/vignettes/mfl_getendpoint.Rmd | 7 ffscrapr-1.4.0/ffscrapr/vignettes/sleeper_basics.Rmd | 6 ffscrapr-1.4.0/ffscrapr/vignettes/sleeper_getendpoint.Rmd | 6 96 files changed, 864 insertions(+), 667 deletions(-)
Title: Anchored Kmedoids for Longitudinal Data Clustering
Description: Advances a novel adaptation of longitudinal k-means clustering
technique (Genolini et al. (2015) <doi:10.18637/jss.v065.i04>)
for grouping trajectories based on the similarities of their
long-term trends and determines the optimal solution based
on either the average silhouette width (Rousseeuw P. J. 1987)
or the Calinski-Harabatz criterion (Calinski and Harabatz (1974)
<doi:10.1080/03610927408827101>). Includes functions to extract
descriptive statistics and generate a visualisation of the
resulting groups, drawing methods from the 'ggplot2' library (Wickham H. (2016)
<doi:10.1007/978-3-319-24277-4>). The package also includes a number of
other useful functions for exploring and manipulating longitudinal
data prior to the clustering process.
Author: Monsuru Adepeju [cre, aut],
Samuel Langton [aut],
Jon Bannister [aut]
Maintainer: Monsuru Adepeju <monsuur2010@yahoo.com>
Diff between akmedoids versions 0.1.5 dated 2020-01-09 and 1.3.0 dated 2021-04-13
akmedoids-0.1.5/akmedoids/R/akmedoids.clust.R |only akmedoids-0.1.5/akmedoids/R/alphaLabel.R |only akmedoids-0.1.5/akmedoids/R/dataImputation.R |only akmedoids-0.1.5/akmedoids/R/elbowPoint.R |only akmedoids-0.1.5/akmedoids/R/outlierDetect.R |only akmedoids-0.1.5/akmedoids/R/population.R |only akmedoids-0.1.5/akmedoids/R/statPrint.R |only akmedoids-0.1.5/akmedoids/R/traj.R |only akmedoids-0.1.5/akmedoids/R/wSpaces.R |only akmedoids-0.1.5/akmedoids/data/population.rda |only akmedoids-0.1.5/akmedoids/man/akmedoids.clust.Rd |only akmedoids-0.1.5/akmedoids/man/alphaLabel.Rd |only akmedoids-0.1.5/akmedoids/man/dataImputation.Rd |only akmedoids-0.1.5/akmedoids/man/elbowPoint.Rd |only akmedoids-0.1.5/akmedoids/man/outlierDetect.Rd |only akmedoids-0.1.5/akmedoids/man/population.Rd |only akmedoids-0.1.5/akmedoids/man/statPrint.Rd |only akmedoids-0.1.5/akmedoids/man/wSpaces.Rd |only akmedoids-1.3.0/akmedoids/DESCRIPTION | 37 akmedoids-1.3.0/akmedoids/MD5 | 77 - akmedoids-1.3.0/akmedoids/NAMESPACE | 62 - akmedoids-1.3.0/akmedoids/NEWS.md | 20 akmedoids-1.3.0/akmedoids/R/akclustr.R |only akmedoids-1.3.0/akmedoids/R/alpha_label.R |only akmedoids-1.3.0/akmedoids/R/data.R |only akmedoids-1.3.0/akmedoids/R/data_imputation.R |only akmedoids-1.3.0/akmedoids/R/elbow_point.R |only akmedoids-1.3.0/akmedoids/R/outlier_detect.R |only akmedoids-1.3.0/akmedoids/R/plot_akstats.R |only akmedoids-1.3.0/akmedoids/R/print_akstats.R |only akmedoids-1.3.0/akmedoids/R/props.R | 54 - akmedoids-1.3.0/akmedoids/R/rates.R | 137 ++ akmedoids-1.3.0/akmedoids/R/remove_rows_n.R |only akmedoids-1.3.0/akmedoids/R/w_spaces.R |only akmedoids-1.3.0/akmedoids/README.md | 42 akmedoids-1.3.0/akmedoids/build/vignette.rds |binary akmedoids-1.3.0/akmedoids/data/TO1Risk.rda |only akmedoids-1.3.0/akmedoids/data/clustr.rda |only akmedoids-1.3.0/akmedoids/data/popl.rda |only akmedoids-1.3.0/akmedoids/data/simulated.rda |only akmedoids-1.3.0/akmedoids/data/traj_w_spaces.rda |only akmedoids-1.3.0/akmedoids/inst/doc/akmedoids-vignette.R | 227 ++-- akmedoids-1.3.0/akmedoids/inst/doc/akmedoids-vignette.Rmd | 296 +++-- akmedoids-1.3.0/akmedoids/inst/doc/akmedoids-vignette.html | 665 +++++++------ akmedoids-1.3.0/akmedoids/man/TO1Risk.Rd |only akmedoids-1.3.0/akmedoids/man/akclustr.Rd |only akmedoids-1.3.0/akmedoids/man/alpha_label.Rd |only akmedoids-1.3.0/akmedoids/man/clustr.Rd |only akmedoids-1.3.0/akmedoids/man/data_imputation.Rd |only akmedoids-1.3.0/akmedoids/man/elbow_point.Rd |only akmedoids-1.3.0/akmedoids/man/outlier_detect.Rd |only akmedoids-1.3.0/akmedoids/man/plot_akstats.Rd |only akmedoids-1.3.0/akmedoids/man/popl.Rd |only akmedoids-1.3.0/akmedoids/man/print_akstats.Rd |only akmedoids-1.3.0/akmedoids/man/props.Rd | 36 akmedoids-1.3.0/akmedoids/man/rates.Rd | 61 - akmedoids-1.3.0/akmedoids/man/remove_rows_n.Rd |only akmedoids-1.3.0/akmedoids/man/simulated.Rd |only akmedoids-1.3.0/akmedoids/man/traj.Rd | 27 akmedoids-1.3.0/akmedoids/man/traj_w_spaces.Rd |only akmedoids-1.3.0/akmedoids/man/w_spaces.Rd |only akmedoids-1.3.0/akmedoids/vignettes/akmedoids-vignette.Rmd | 296 +++-- akmedoids-1.3.0/akmedoids/vignettes/references.bib | 9 63 files changed, 1333 insertions(+), 713 deletions(-)