Title: Goodness of Fit Tests for High-Dimensional Linear Regression
Models
Description: Performs goodness of fits tests for both high and low-dimensional linear models.
It can test for a variety of model misspecifications including nonlinearity and heteroscedasticity.
In addition one can test the significance of potentially large groups of variables, and also
produce p-values for the significance of individual variables in high-dimensional linear
regression.
Author: Rajen Shah [aut, cre],
Peter Buhlmann [aut]
Maintainer: Rajen Shah <r.shah@statslab.cam.ac.uk>
Diff between RPtests versions 0.1.4 dated 2017-04-03 and 0.1.5 dated 2021-07-10
RPtests-0.1.4/RPtests/src/RPtests_init.c |only RPtests-0.1.5/RPtests/DESCRIPTION | 12 ++++++------ RPtests-0.1.5/RPtests/MD5 | 29 ++++++++++++++--------------- RPtests-0.1.5/RPtests/NAMESPACE | 4 +++- RPtests-0.1.5/RPtests/R/RPtest.R | 4 ++-- RPtests-0.1.5/RPtests/R/RPtest_single.R | 4 ++-- RPtests-0.1.5/RPtests/R/RcppExports.R | 2 +- RPtests-0.1.5/RPtests/R/projections.R | 7 +++---- RPtests-0.1.5/RPtests/R/pvals.R | 4 ++-- RPtests-0.1.5/RPtests/R/sqrt_lasso.R | 18 ++++++++++-------- RPtests-0.1.5/RPtests/man/RPtest.Rd | 28 ++++++++++++++++++++-------- RPtests-0.1.5/RPtests/man/RPtest_single.Rd | 5 ++--- RPtests-0.1.5/RPtests/man/pval.Rd | 5 ++--- RPtests-0.1.5/RPtests/man/sparse_proj.Rd | 8 +++----- RPtests-0.1.5/RPtests/man/sqrt_lasso.Rd | 19 +++++++++---------- RPtests-0.1.5/RPtests/src/RcppExports.cpp | 17 ++++++++++++++++- 16 files changed, 95 insertions(+), 71 deletions(-)
Title: Fast Imputations Using 'Rcpp' and 'Armadillo'
Description: Fast imputations under the object-oriented programming paradigm.
Moreover there are offered a few functions built to work with popular R packages such as 'data.table' or 'dplyr'.
The biggest improvement in time performance could be achieve for a calculation where a grouping variable have to be used.
A single evaluation of a quantitative model for the multiple imputations is another major enhancement.
A new major improvement is one of the fastest predictive mean matching in the R world because of presorting and binary search.
Author: Maciej Nasinski [aut, cre]
Maintainer: Maciej Nasinski <nasinski.maciej@gmail.com>
Diff between miceFast versions 0.6.9 dated 2020-12-13 and 0.7.1 dated 2021-07-10
DESCRIPTION | 14 - MD5 | 35 ++-- NAMESPACE | 20 -- NEWS.md | 19 +- R/VIF.R | 10 + R/fill_NA.R | 21 ++ R/fill_NA_N.R | 18 +- R/plots.R | 2 README.md |only build/vignette.rds |binary inst/doc/miceFast-intro.Rmd | 2 inst/doc/miceFast-intro.html | 311 +++--------------------------------- man/compare_imp.Rd | 2 src/miceFast_class.cpp | 6 tests/testthat/Rplots.pdf |only tests/testthat/test-impute.R | 5 tests/testthat/test-imputes_funcs.R | 58 ++++++ tests/testthat/test-plot.R |only tests/testthat/test-vif.R | 35 +++- vignettes/miceFast-intro.Rmd | 2 20 files changed, 210 insertions(+), 350 deletions(-)
Title: Maximum Entropy Bootstrap for Time Series
Description: Maximum entropy density based dependent data bootstrap.
An algorithm is provided to create a population of time series (ensemble)
without assuming stationarity. The reference paper (Vinod, H.D., 2004 <DOI: 10.1016/j.jempfin.2003.06.002>) explains
how the algorithm satisfies the ergodic theorem and the central limit theorem.
Author: Hrishikesh D. Vinod <Vinod@fordham.edu>, Javier
López-de-Lacalle <javlacalle@yahoo.es>, and Fred Viole
Maintainer: Fred Viole <fviole@fordham.edu>
Diff between meboot versions 1.4-9 dated 2021-05-29 and 1.4-9.1 dated 2021-07-10
DESCRIPTION | 10 +-- MD5 | 14 ++-- NAMESPACE | 2 R/meboot.R | 9 --- R/mebootSpear.R | 148 ++++++++++++++++++++++++++-------------------------- build/vignette.rds |binary data/ullwan.rda |binary inst/doc/meboot.pdf |binary 8 files changed, 90 insertions(+), 93 deletions(-)
Title: Politely Web Scrape Data from SquashInfo
Description: Scrape SquashInfo <http://www.squashinfo.com/> for data on the Professional Squash Association World Tour and other squash events. 'squashinformr' functions scrape, parse, and clean data associated with players, tournaments, and rankings.
Author: Hayden MacDonald [aut, cre]
Maintainer: Hayden MacDonald <hayden.macdonald.8778@gmail.com>
Diff between squashinformr versions 0.2.2 dated 2021-03-09 and 0.2.3 dated 2021-07-10
DESCRIPTION | 7 +--- MD5 | 42 ++++++++++++------------ R/get_matchup.R | 6 +-- R/get_player_.R | 4 +- R/get_player_recent_.R | 12 +++--- R/get_rankings.R | 2 - R/get_tournament_.R | 35 ++++++++++---------- README.md | 34 ++++++++++++------- man/get_tournament_games.Rd | 8 ++-- man/get_tournament_matches.Rd | 8 ++-- man/get_tournament_players.Rd | 8 ++-- man/get_tournaments.Rd | 2 - tests/testthat/test_get_matchup.R | 28 ++++++++-------- tests/testthat/test_get_player_recent_games.R | 41 +++++++++++------------ tests/testthat/test_get_player_recent_matches.R | 42 +++++++++++------------- tests/testthat/test_get_player_recent_results.R | 41 +++++++++++------------ tests/testthat/test_get_players.R | 35 +++++++++----------- tests/testthat/test_get_rankings.R | 16 ++++----- tests/testthat/test_get_tournament_games.R | 30 +++++++---------- tests/testthat/test_get_tournament_matches.R | 31 +++++++---------- tests/testthat/test_get_tournament_players.R | 32 ++++++++---------- tests/testthat/test_get_tournaments.R | 13 +++---- 22 files changed, 233 insertions(+), 244 deletions(-)
Title: Manipulate and Map Origin-Destination Data
Description: The aim of 'od' is to provide tools and example datasets for working with
origin-destination ('OD') datasets of the type used to describe aggregate
urban mobility patterns (Carey et al. 1981) <doi:10.1287/trsc.15.1.32>.
The package builds on functions for working with 'OD' data in the package 'stplanr',
(Lovelace and Ellison 2018) <doi:10.32614/RJ-2018-053> with a focus on computational
efficiency and support for the 'sf' class system (Pebesma 2018) <doi:10.32614/RJ-2018-009>.
With few dependencies and a simple class system based on data frames,
the package is intended to facilitate efficient analysis of 'OD' datasets
and to provide a place for developing new functions.
The package enables the creation and analysis of geographic entities
representing large scale mobility patterns,
from daily travel between zones in cities to migration between countries.
Author: Robin Lovelace [aut, cre] (<https://orcid.org/0000-0001-5679-6536>),
David Cooley [ctb]
Maintainer: Robin Lovelace <rob00x@gmail.com>
Diff between od versions 0.2.1 dated 2021-04-22 and 0.3.0 dated 2021-07-10
DESCRIPTION | 6 +-- MD5 | 20 +++++++----- NAMESPACE | 1 NEWS.md | 5 +++ R/aggregate.R | 77 ++++++++++++++++++++++++++++++++++++++++--------- R/jitter.R |only R/od-funs.R | 12 +++++++ build/vignette.rds |binary inst/doc/od.html | 34 ++++++++------------- man/od_disaggregate.Rd | 35 +++++++++++++++++----- man/od_jitter.Rd |only man/od_to_sf.Rd | 2 + 12 files changed, 137 insertions(+), 55 deletions(-)
Title: Lindley Power Series Distribution
Description: Computes the probability density function, the cumulative distribution function, the hazard rate function, the quantile function and random generation for Lindley Power Series distributions, see Nadarajah and Si (2018) <doi:10.1007/s13171-018-0150-x>.
Author: Saralees Nadarajah & Yuancheng Si, Peihao Wang
Maintainer: Yuancheng Si <siyuanchengman@gmail.com>
Diff between LindleyPowerSeries versions 0.1.0 dated 2018-11-19 and 1.0.1 dated 2021-07-10
DESCRIPTION | 11 +- MD5 | 22 ++-- R/LindelyBinomial.R | 2 R/LindelyGeometric.R | 2 R/LindelyLogarithmic.R | 2 R/LindelyNegativeBinomial.R | 2 R/LindelyPoisson.R | 2 man/LindleyBinomial.Rd | 196 ++++++++++++++++++++--------------------- man/LindleyGeometric.Rd | 192 ++++++++++++++++++++-------------------- man/LindleyLogarithmic.Rd | 192 ++++++++++++++++++++-------------------- man/LindleyNegativeBinomial.Rd | 192 ++++++++++++++++++++-------------------- man/LindleyPoisson.Rd | 192 ++++++++++++++++++++-------------------- 12 files changed, 511 insertions(+), 496 deletions(-)
More information about LindleyPowerSeries at CRAN
Permanent link
Title: Deep Learning for General Purpose
Description: Aims to provide simple intuitive functions to create quick prototypes of artificial neural network or deep learning models. In addition novel ensemble models like 'deeptree' and 'deepforest' has been included which combines decision trees and neural network.
Author: Rajesh Balakrishnan
Maintainer: Rajesh Balakirshnan <rajeshbalakrishnan24@gmail.com>
Diff between deepdive versions 1.0.3 dated 2021-07-09 and 1.0.4 dated 2021-07-10
DESCRIPTION | 6 - MD5 | 6 - R/predict.deeptree.R | 209 +++++++++++++++++++++++---------------------------- README.md | 5 - 4 files changed, 105 insertions(+), 121 deletions(-)
Title: Inspect, Read, Edit and Run 'APSIM' "Next Generation" and
'APSIM' Classic
Description: The functions in this package inspect, read, edit and run files for 'APSIM' "Next Generation" ('JSON')
and 'APSIM' "Classic" ('XML'). The files with an 'apsim' extension correspond to
'APSIM' Classic (7.x) - Windows only - and the ones with an 'apsimx' extension correspond to 'APSIM' "Next Generation".
For more information about 'APSIM' see (<https://www.apsim.info/>) and for 'APSIM'
next generation (<https://apsimnextgeneration.netlify.app/>).
Author: Fernando Miguez [aut, cre] (<https://orcid.org/0000-0002-4627-8329>)
Maintainer: Fernando Miguez <femiguez@iastate.edu>
Diff between apsimx versions 1.993 dated 2021-07-01 and 1.995 dated 2021-07-10
DESCRIPTION | 6 MD5 | 68 +++--- NAMESPACE | 3 R/apsim_internal.R | 138 ++++++------- R/apsim_met.R | 22 ++ R/apsimx.R | 43 ++++ R/edit_apsim.R | 43 +++- R/edit_apsimx_json.R | 64 +++++- R/edit_apsimx_replacement.R | 20 +- R/get_isric_soil_profile.R | 2 R/get_power_apsim_met.R | 6 R/inspect_apsim_xml.R | 23 +- R/inspect_apsimx_json.R | 380 +++++++++++++++++++++++++++++++++++++- R/inspect_apsimx_replacement.R | 31 ++- R/wget_apsimx_json.R | 94 --------- inst/doc/apsimx-scripts.html | 6 inst/doc/apsimx.Rmd | 13 - inst/doc/apsimx.html | 20 +- inst/doc/optim-apsim.html | 4 man/apsimx.Rd | 5 man/edit_apsim.Rd | 14 - man/edit_apsimx.Rd | 15 - man/get_isric_soil_profile.Rd | 2 man/get_power_apsim_met.Rd | 6 man/grep_json_list.Rd |only man/inspect_apsim.Rd | 13 + man/inspect_apsimx.Rd | 3 man/inspect_apsimx_json.Rd |only man/inspect_apsimx_replacement.Rd | 5 man/tt_apsim_met.Rd | 2 man/xargs_apsimx.Rd |only tests/test_edit.R | 23 ++ tests/test_get_daymet_apsim_met.R | 6 tests/test_grep_json_list.R |only tests/test_inspect.R | 30 +++ tests/test_read_apsim_met.R | 7 vignettes/apsimx.Rmd | 13 - 37 files changed, 829 insertions(+), 301 deletions(-)
Title: Analyze Cricket Performances Based on Data from Cricsheet
Description: Analyzing performances of cricketers and cricket teams
based on 'yaml' match data from Cricsheet <https://cricsheet.org/>.
Author: Tinniam V Ganesh
Maintainer: Tinniam V Ganesh <tvganesh.85@gmail.com>
Diff between yorkr versions 0.0.24 dated 2021-05-25 and 0.0.25 dated 2021-07-10
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- R/plotWinLossBetweenTeams.R | 16 ++++++++++++++-- R/plotWinLossTeamVsAllTeams.R | 16 ++++++++++++++-- man/plotWinLossBetweenTeams.Rd | 4 +++- man/plotWinLossTeamVsAllTeams.Rd | 4 +++- 6 files changed, 43 insertions(+), 15 deletions(-)
Title: Client Library for SpatioTemporal Asset Catalog
Description: Provides functions to access, search and download spacetime earth
observation data via SpatioTemporal Asset Catalog (STAC). This package
supports the version 1.0.0 of the STAC specification
(<http://stacspec.org>).
Author: Brazil Data Cube Team [cre, aut],
National Institute for Space Research (INPE) [cph]
Maintainer: Brazil Data Cube Team <brazildatacube@inpe.br>
Diff between rstac versions 0.9.1 dated 2021-04-16 and 0.9.1-4 dated 2021-07-10
rstac-0.9.1-4/rstac/DESCRIPTION | 16 rstac-0.9.1-4/rstac/MD5 | 77 rstac-0.9.1-4/rstac/NAMESPACE | 4 rstac-0.9.1-4/rstac/NEWS.md | 7 rstac-0.9.1-4/rstac/R/assets_download.R | 21 rstac-0.9.1-4/rstac/R/collections.R | 3 rstac-0.9.1-4/rstac/R/documents.R | 78 rstac-0.9.1-4/rstac/R/ext_query.R | 47 rstac-0.9.1-4/rstac/R/extensions.R | 14 rstac-0.9.1-4/rstac/R/items.R | 3 rstac-0.9.1-4/rstac/R/print.R | 75 rstac-0.9.1-4/rstac/R/request.R | 4 rstac-0.9.1-4/rstac/R/rstac.R | 2 rstac-0.9.1-4/rstac/R/stac.R | 9 rstac-0.9.1-4/rstac/R/stac_search.R | 50 rstac-0.9.1-4/rstac/R/utils.R | 68 rstac-0.9.1-4/rstac/README.md | 33 rstac-0.9.1-4/rstac/man/assets_download.Rd | 9 rstac-0.9.1-4/rstac/man/collections.Rd | 3 rstac-0.9.1-4/rstac/man/ext_query.Rd | 2 rstac-0.9.1-4/rstac/man/extensions.Rd | 9 rstac-0.9.1-4/rstac/man/items.Rd | 3 rstac-0.9.1-4/rstac/man/items_fields.Rd | 2 rstac-0.9.1-4/rstac/man/items_functions.Rd | 14 rstac-0.9.1-4/rstac/man/items_group.Rd | 6 rstac-0.9.1-4/rstac/man/print.Rd | 67 rstac-0.9.1-4/rstac/man/rstac.Rd | 6 rstac-0.9.1-4/rstac/man/stac.Rd | 9 rstac-0.9.1-4/rstac/man/stac_search.Rd | 14 rstac-0.9.1-4/rstac/tests/fixtures/items_functions.yml | 223 + rstac-0.9.1-4/rstac/tests/fixtures/stac_collection_obj.yml | 284 + rstac-0.9.1-4/rstac/tests/fixtures/stac_item_obj.yml | 356 ++ rstac-0.9.1-4/rstac/tests/fixtures/stac_obj.yml | 180 + rstac-0.9.1-4/rstac/tests/fixtures/stac_search_obj.yml | 776 ++++- rstac-0.9.1-4/rstac/tests/fixtures/tests_examples.yml | 1580 ++--------- rstac-0.9.1-4/rstac/tests/testthat/test-examples.R | 53 rstac-0.9.1-4/rstac/tests/testthat/test-internals.R | 4 rstac-0.9.1-4/rstac/tests/testthat/test-items_functions.R | 66 rstac-0.9.1-4/rstac/tests/testthat/test-stac_obj.R | 113 rstac-0.9.1/rstac/tests/fixtures/test_internal_functions.yml |only 40 files changed, 2346 insertions(+), 1944 deletions(-)
Title: Handling Methods for Naver News Text Crawling
Description: Provides some functions to get Korean text sample from news articles in
Naver which is popular news portal service <https://news.naver.com/> in Korea.
Author: Chanyub Park [aut, cre] (<https://orcid.org/0000-0001-6474-2570>)
Maintainer: Chanyub Park <mrchypark@gmail.com>
Diff between N2H4 versions 0.5.7 dated 2020-03-20 and 0.5.9 dated 2021-07-10
DESCRIPTION | 14 +++---- MD5 | 50 +++++++++++++------------- NAMESPACE | 2 - R/getMainCategory.R | 4 +- man/N2H4-package.Rd | 48 ++++++++++++------------- man/cate_list_url_ex.Rd | 28 ++++++++------- man/getAllComment.Rd | 56 +++++++++++++++--------------- man/getComment.Rd | 78 ++++++++++++++++++++--------------------- man/getContent.Rd | 62 ++++++++++++++++----------------- man/getContentBody.Rd | 64 +++++++++++++++++----------------- man/getContentDatetime.Rd | 70 ++++++++++++++++++------------------- man/getContentPress.Rd | 64 +++++++++++++++++----------------- man/getContentTitle.Rd | 64 +++++++++++++++++----------------- man/getLike.Rd | 44 +++++++++++------------ man/getMainCategory.Rd | 36 +++++++++---------- man/getMaxPageNum.Rd | 52 +++++++++++++-------------- man/getNewsTrend.Rd | 52 +++++++++++++-------------- man/getQueryUrl.Rd | 60 ++++++++++++++++---------------- man/getSubCategory.Rd | 50 +++++++++++++------------- man/getUrlListByCategory.Rd | 50 +++++++++++++------------- man/getUrlListByQuery.Rd | 46 ++++++++++++------------ man/getVideoUrl.Rd | 44 +++++++++++------------ man/news_url_ex.Rd | 28 ++++++++------- man/query_list_url_ex.Rd | 28 ++++++++------- man/setUrls.Rd | 82 ++++++++++++++++++++++---------------------- man/video_url_ex.Rd | 28 ++++++++------- 26 files changed, 606 insertions(+), 598 deletions(-)
Title: Mixed Effect Excess Hazard Models
Description: Fit flexible (excess) hazard regression models with the possibility of including non-proportional effects of covariables and of adding a random effect at the cluster level (corresponding to a shared frailty). A detailed description of the package functionalities is provided in Charvat and Belot (2021) <doi: 10.18637/jss.v098.i14>.
Author: Hadrien Charvat, Aurelien Belot
Maintainer: Hadrien Charvat <chadrien@ncc.go.jp>
Diff between mexhaz versions 1.10 dated 2020-10-13 and 1.11 dated 2021-07-10
mexhaz-1.10/mexhaz/build |only mexhaz-1.10/mexhaz/inst/doc |only mexhaz-1.10/mexhaz/vignettes |only mexhaz-1.11/mexhaz/DESCRIPTION | 11 +++++------ mexhaz-1.11/mexhaz/MD5 | 17 ++++++----------- mexhaz-1.11/mexhaz/NEWS | 5 +++++ mexhaz-1.11/mexhaz/R/update.mexhaz.R | 4 ++-- mexhaz-1.11/mexhaz/inst/CITATION |only mexhaz-1.11/mexhaz/man/mexhaz-package.Rd | 7 ++++++- mexhaz-1.11/mexhaz/man/mexhaz.Rd | 7 ++++++- 10 files changed, 30 insertions(+), 21 deletions(-)
Title: Export Data from R so 'DataGraph' can Read it
Description: Functions to save either '.dtable' or '.dtbin' files that can be read by 'DataGraph', a graphing and analysis application for mac OS. Can save a data frame, collection of data frames and sequences of data frames and individual vectors. For more information see <https://community.visualdatatools.com/datagraph/knowledge-base/r-package/>.
Author: David Adalsteinsson
Maintainer: David Adalsteinsson <david@visualdatatools.com>
Diff between DataGraph versions 1.2.1 dated 2020-03-05 and 1.2.2 dated 2021-07-10
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- src/DTFile.cpp | 15 +++++++-------- src/DTRegion3D.cpp | 2 +- 4 files changed, 15 insertions(+), 16 deletions(-)
Title: Data Visualization for Statistics in Social Science
Description: Collection of plotting and table output functions for data
visualization. Results of various statistical analyses (that are commonly used
in social sciences) can be visualized using this package, including simple and
cross tabulated frequencies, histograms, box plots, (generalized) linear models,
mixed effects models, principal component analysis and correlation matrices,
cluster analyses, scatter plots, stacked scales, effects plots of regression
models (including interaction terms) and much more. This package supports
labelled data.
Author: Daniel Lüdecke [aut, cre] (<https://orcid.org/0000-0002-8895-3206>),
Alexander Bartel [ctb] (<https://orcid.org/0000-0002-1280-6138>),
Carsten Schwemmer [ctb],
Chuck Powell [ctb] (<https://orcid.org/0000-0002-3606-2188>),
Amir Djalovski [ctb],
Johannes Titz [ctb] (<https://orcid.org/0000-0002-1102-5719>)
Maintainer: Daniel Lüdecke <d.luedecke@uke.de>
Diff between sjPlot versions 2.8.8 dated 2021-05-25 and 2.8.9 dated 2021-07-10
DESCRIPTION | 16 MD5 | 80 ++-- NAMESPACE | 4 NEWS.md | 6 R/plot_kfold_cv.R | 8 R/plot_model.R | 2 R/tab_stackfrq.R | 5 inst/doc/blackwhitefigures.html | 287 ++--------------- inst/doc/custplot.html | 457 +++++++--------------------- inst/doc/plot_interactions.html | 269 +--------------- inst/doc/plot_likert_scales.html | 327 +++----------------- inst/doc/plot_marginal_effects.html | 291 ++---------------- inst/doc/plot_model_estimates.R | 10 inst/doc/plot_model_estimates.Rmd | 10 inst/doc/plot_model_estimates.html | 433 ++++++-------------------- inst/doc/sjtitemanalysis.html | 237 -------------- inst/doc/tab_bayes.html | 301 ++---------------- inst/doc/tab_mixed.html | 284 ++--------------- inst/doc/tab_model_estimates.R | 12 inst/doc/tab_model_estimates.Rmd | 12 inst/doc/tab_model_estimates.html | 469 ++++++++--------------------- inst/doc/tab_model_robust.html | 433 ++++++-------------------- inst/doc/table_css.html | 431 ++++++-------------------- man/dist_chisq.Rd | 130 ++++---- man/dist_f.Rd | 122 +++---- man/dist_norm.Rd | 120 +++---- man/dist_t.Rd | 116 +++---- man/plot_grid.Rd | 118 +++---- man/plot_kfold_cv.Rd | 118 +++---- man/plot_model.Rd | 2 man/plot_residuals.Rd | 140 ++++---- man/plot_stackfrq.Rd | 278 ++++++++--------- man/save_plot.Rd | 124 +++---- man/set_theme.Rd | 582 ++++++++++++++++++------------------ man/sjPlot-themes.Rd | 304 +++++++++--------- man/sjp.poly.Rd | 278 ++++++++--------- man/sjplot.Rd | 162 +++++----- man/tab_df.Rd | 312 +++++++++---------- man/view_df.Rd | 298 +++++++++--------- vignettes/plot_model_estimates.Rmd | 10 vignettes/tab_model_estimates.Rmd | 12 41 files changed, 2597 insertions(+), 5013 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-06-30 1.0.2
2021-06-01 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-06-29 3.5.0
2021-04-02 3.4.0
2021-02-26 3.3.2
2021-02-23 3.3.1
2021-01-06 3.2.0
2020-11-16 3.1.2
2020-11-13 3.1.1
2020-11-12 3.1.0
2020-10-21 3.0.0
2020-09-17 2.4.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-06-18 0.3.3
2021-05-22 0.3.1
2021-03-23 0.2.9
2021-02-25 0.2.7
2020-11-01 0.2.2
2020-04-29 0.1.7
2017-01-24 0.1.3
Title: Pedigree, Genetic Merit and Phenotype Simulation
Description: Simulate pedigree, genetic merits and phenotypes with random/non-random matings followed by random/non-random selection with different intensities and patterns in males and females.
Bijma, P. & Rutten, M. (2002) <https://www.wur.nl/en/Research-Results/Chair-groups/Animal-Sciences/Animal-Breeding-and-Genomics-Group/Research/Software.htm>.
Author: Mohammad Ali Nilforooshan [aut, cre]
(<https://orcid.org/0000-0003-0339-5442>)
Maintainer: Mohammad Ali Nilforooshan <m.a.nilforooshan@gmail.com>
Diff between pedSimulate versions 1.0.1 dated 2021-06-30 and 1.1.0 dated 2021-07-10
DESCRIPTION | 6 +-- MD5 | 16 ++++----- NEWS.md | 6 ++- R/appendPed.R | 75 +++++++++++++++++++++++++++++++++++++++++-- R/pedSimulate.R | 5 +- R/simulatePed.R | 79 ++++++++++++++++++++++++++++++++++++++++++---- man/appendPed.Rd | 26 ++++++++++++--- man/pedSimulte-package.Rd | 5 +- man/simulatePed.Rd | 30 +++++++++++++---- 9 files changed, 210 insertions(+), 38 deletions(-)
Title: 'Drat' R Archive Template
Description: Creation and use of R Repositories via helper functions
to insert packages into a repository, and to add repository information
to the current R session. Two primary types of repositories are support:
gh-pages at GitHub, as well as local repositories on either the same machine
or a local network. Drat is a recursive acronym: Drat R Archive Template.
Author: Dirk Eddelbuettel with contributions by Carl Boettiger, Neal Fultz,
Sebastian Gibb, Colin Gillespie, Jan Górecki, Matt Jones, Thomas Leeper,
Steven Pav, Jan Schulz, Christoph Stepper, Felix G.M. Ernst and Patrick
Schratz.
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between drat versions 0.2.0 dated 2021-04-22 and 0.2.1 dated 2021-07-10
ChangeLog | 22 ++++++++++++++++++++++ DESCRIPTION | 8 ++++---- MD5 | 28 ++++++++++++++-------------- R/initRepo.R | 9 +++++++-- R/insertPackage.R | 19 ++++++++++++++++++- build/vignette.rds |binary inst/NEWS.Rd | 13 +++++++++++++ inst/doc/DratStepByStep.Rmd | 18 +++++------------- inst/doc/DratStepByStep.html | 16 ++++------------ man/getPackageInfo.Rd | 6 ++++++ man/identifyPackageType.Rd | 6 ++++++ man/initRepo.Rd | 6 ++++-- man/insertPackage.Rd | 6 ++++++ tests/version.R | 3 ++- vignettes/DratStepByStep.Rmd | 18 +++++------------- 15 files changed, 116 insertions(+), 62 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-06-25 4.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-06-24 1.1.1
2020-07-02 1.0.2.1
2020-03-15 1.0.1
2020-02-03 1.0.0
2019-01-11 0.2.3
2018-07-03 0.2.2.0
2018-05-10 0.2.1.0
2017-12-11 0.2.0
2017-10-26 0.1.4
2017-02-20 0.1.1
Title: Retrieving Information of Proteins from Uniprot
Description: Connect to Uniprot <https://www.uniprot.org/> to retrieve information about proteins using their accession number such information could be name or taxonomy information, For detailed information kindly read the publication <https://www.sciencedirect.com/science/article/pii/S1874391919303859>.
Author: Mohamed Soudy [aut, cre],
Ali Mostafa [aut]
Maintainer: Mohamed Soudy <MohmedSoudy2009@gmail.com>
Diff between UniprotR versions 2.0.7 dated 2021-06-06 and 2.0.8 dated 2021-07-10
DESCRIPTION | 6 +++--- MD5 | 4 ++-- R/GetProteinFunction.R | 2 +- 3 files changed, 6 insertions(+), 6 deletions(-)
Title: Blind Source Separation and Supervised Dimension Reduction for
Time Series
Description: Different estimators are provided to solve the blind source separation problem for multivariate time series with stochastic volatility and supervised dimension reduction problem for multivariate time series. Different functions based on AMUSE and SOBI are also provided for estimating the dimension of the white noise subspace. The package is fully described in Nordhausen, Matilainen, Miettinen, Virta and Taskinen (2021) <doi:10.18637/jss.v098.i15>.
Author: Markus Matilainen [cre, aut] (<https://orcid.org/0000-0002-5597-2670>),
Christophe Croux [aut],
Jari Miettinen [aut] (<https://orcid.org/0000-0002-3270-7014>),
Klaus Nordhausen [aut] (<https://orcid.org/0000-0002-3758-8501>),
Hannu Oja [aut],
Sara Taskinen [aut] (<https://orcid.org/0000-0001-9470-7258>),
Joni Virta [aut] (<https://orcid.org/0000-0002-2150-2769>)
Maintainer: Markus Matilainen <markus.matilainen@outlook.com>
Diff between tsBSS versions 0.5.7 dated 2021-04-01 and 1.0.0 dated 2021-07-10
DESCRIPTION | 10 +++++----- MD5 | 39 ++++++++++++++++++++------------------- R/tssdr.R | 2 +- inst/CITATION |only inst/ChangeLog | 8 +++++++- man/AMUSEasymp.Rd | 2 +- man/AMUSEboot.Rd | 2 +- man/AMUSEladle.Rd | 4 ++-- man/FixNA.Rd | 14 +++++++------- man/PVC.Rd | 10 +++++----- man/SOBIasymp.Rd | 2 +- man/SOBIboot.Rd | 4 ++-- man/SOBIladle.Rd | 6 +++--- man/gFOBI.Rd | 8 ++++---- man/gJADE.Rd | 8 ++++---- man/gSOBI.Rd | 4 ++-- man/lbtest.Rd | 4 ++-- man/summary.tssdr.Rd | 14 +++++++------- man/tsBSS-package.Rd | 13 ++++++++----- man/tssdr.Rd | 9 +++++---- man/vSOBI.Rd | 6 +++--- 21 files changed, 90 insertions(+), 79 deletions(-)
Title: Web Interface to 'IsoplotR'
Description: Provides a graphical user interface to the 'IsoplotR' package for radiometric geochronology. The GUI runs in an internet browser and can either be used offline, or hosted on a server to provide online access to the 'IsoplotR' toolbox.
Author: Pieter Vermeesch [aut, cre],
Tim Band [ctb]
Maintainer: Pieter Vermeesch <p.vermeesch@ucl.ac.uk>
Diff between IsoplotRgui versions 4.0 dated 2021-06-07 and 4.1 dated 2021-07-10
DESCRIPTION | 10 - MD5 | 32 +-- R/IsoplotR.R | 2 inst/www/help/concordia.html | 24 +- inst/www/help/evolution.html | 4 inst/www/help/helioplot.html | 4 inst/www/help/isochron.html | 4 inst/www/home/map.html | 2 inst/www/home/news.html | 14 - inst/www/home/world.svg | 2 inst/www/js/IsoplotR.js | 263 ++++++++++++++-------------- inst/www/locales/en/contextual_help.json | 3 inst/www/locales/en/dictionary_id.json | 37 ++- inst/www/locales/en/home_id.json | 2 inst/www/locales/zh_Hans/dictionary_id.json | 24 +- inst/www/options/U-Pb.html | 7 inst/www/version.txt | 2 17 files changed, 227 insertions(+), 209 deletions(-)
Title: Bayesian Inference of Non-Linear and Non-Gaussian State Space
Models
Description: Efficient methods for Bayesian inference of state space models
via particle Markov chain Monte Carlo (MCMC) and MCMC based on parallel
importance sampling type weighted estimators
(Vihola, Helske, and Franks, 2020, <doi:10.1111/sjos.12492>).
Gaussian, Poisson, binomial, negative binomial, and Gamma
observation densities and basic stochastic volatility models
with linear-Gaussian state dynamics,
as well as general non-linear Gaussian models and discretised
diffusion models are supported.
Author: Jouni Helske [aut, cre] (<https://orcid.org/0000-0001-7130-793X>),
Matti Vihola [aut] (<https://orcid.org/0000-0002-8041-7222>)
Maintainer: Jouni Helske <jouni.helske@iki.fi>
Diff between bssm versions 1.1.4 dated 2021-04-13 and 1.1.5 dated 2021-07-10
bssm-1.1.4/bssm/man/predict.Rd |only bssm-1.1.5/bssm/DESCRIPTION | 8 ++--- bssm-1.1.5/bssm/MD5 | 24 +++++++-------- bssm-1.1.5/bssm/NAMESPACE | 1 bssm-1.1.5/bssm/NEWS | 10 +++++- bssm-1.1.5/bssm/R/bssm-package.R | 14 +++++---- bssm-1.1.5/bssm/R/check_arguments.R | 44 +++++++++++++++++------------ bssm-1.1.5/bssm/R/predict.R | 7 +++- bssm-1.1.5/bssm/data/drownings.rda |binary bssm-1.1.5/bssm/inst/doc/bssm.html | 2 - bssm-1.1.5/bssm/inst/doc/growth_model.html | 6 +-- bssm-1.1.5/bssm/inst/doc/sde_model.html | 2 - bssm-1.1.5/bssm/man/drownings.Rd | 12 ++++--- bssm-1.1.5/bssm/man/predict.mcmc_output.Rd |only 14 files changed, 78 insertions(+), 52 deletions(-)