Thu, 05 Aug 2021

Package vtable updated to version 1.3.3 with previous version 1.3.2 dated 2021-05-28

Title: Variable Table for Variable Documentation
Description: Automatically generates HTML variable documentation including variable names, labels, classes, value labels (if applicable), value ranges, and summary statistics. See the vignette "vtable" for a package overview.
Author: Nick Huntington-Klein [aut, cre]
Maintainer: Nick Huntington-Klein <nhuntington-klein@seattleu.edu>

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Package SoilTaxonomy updated to version 0.1.4 with previous version 0.1.3 dated 2021-05-03

Title: A System of Soil Classification for Making and Interpreting Soil Surveys
Description: Taxonomic dictionaries, formative element lists, and functions related to the maintenance, development and application of U.S. Soil Taxonomy. Data and functionality are based on official U.S. Department of Agriculture sources including the latest edition of the Keys to Soil Taxonomy. Descriptions and metadata are obtained from the National Soil Information System or Soil Survey Geographic databases. Other sources are referenced in the data documentation. Provides tools for understanding and interacting with concepts in the U.S. Soil Taxonomic System. Most of the current utilities are for working with taxonomic concepts at the "higher" taxonomic levels: Order, Suborder, Great Group, and Subgroup.
Author: Dylan Beaudette [aut], Andrew Brown [aut, cre]
Maintainer: Andrew Brown <andrew.g.brown@usda.gov>

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Package rgeoda updated to version 0.0.8-4 with previous version 0.0.8-3 dated 2021-07-22

Title: R Library for Spatial Data Analysis
Description: Provides spatial data analysis functionalities including Exploratory Spatial Data Analysis, Spatial Cluster Detection and Clustering Analysis, Regionalization, etc. based on the C++ source code of 'GeoDa', which is an open-source software tool that serves as an introduction to spatial data analysis. The 'GeoDa' software and its documentation are available at <https://geodacenter.github.io>.
Author: Xun Li [aut, cre], Luc Anselin [aut]
Maintainer: Xun Li <lixun910@gmail.com>

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Package tinytex updated to version 0.33 with previous version 0.32 dated 2021-05-29

Title: Helper Functions to Install and Maintain TeX Live, and Compile LaTeX Documents
Description: Helper functions to install and maintain the 'LaTeX' distribution named 'TinyTeX' (<https://yihui.org/tinytex/>), a lightweight, cross-platform, portable, and easy-to-maintain version of 'TeX Live'. This package also contains helper functions to compile 'LaTeX' documents, and install missing 'LaTeX' packages automatically.
Author: Yihui Xie [aut, cre, cph] (<https://orcid.org/0000-0003-0645-5666>), RStudio, PBC [cph], Christophe Dervieux [ctb] (<https://orcid.org/0000-0003-4474-2498>), Devon Ryan [ctb] (<https://orcid.org/0000-0002-8549-0971>), Ethan Heinzen [ctb], Fernando Cagua [ctb]
Maintainer: Yihui Xie <xie@yihui.name>

Diff between tinytex versions 0.32 dated 2021-05-29 and 0.33 dated 2021-08-05

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Package vroom updated to version 1.5.4 with previous version 1.5.3 dated 2021-07-14

Title: Read and Write Rectangular Text Data Quickly
Description: The goal of 'vroom' is to read and write data (like 'csv', 'tsv' and 'fwf') quickly. When reading it uses a quick initial indexing step, then reads the values lazily , so only the data you actually use needs to be read. The writer formats the data in parallel and writes to disk asynchronously from formatting.
Author: Jim Hester [aut, cre] (<https://orcid.org/0000-0002-2739-7082>), Hadley Wickham [aut] (<https://orcid.org/0000-0003-4757-117X>), https://github.com/mandreyel/ [cph] (mio library), Jukka Jylänki [cph] (grisu3 implementation), Mikkel Jørgensen [cph] (grisu3 implementation), RStudio [cph, fnd]
Maintainer: Jim Hester <jim.hester@rstudio.com>

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Package tvem updated to version 1.3 with previous version 1.2-0 dated 2021-02-19

Title: Time-Varying Effect Models
Description: Fits time-varying effect models (TVEM). These are a kind of application of varying-coefficient models in the context of longitudinal data, allowing the strength of linear, logistic, or Poisson regression relationships to change over time. These models are described further in Tan, Shiyko, Li, Li & Dierker (2012) <doi:10.1037/a0025814>. We thank Kaylee Litson, Patricia Berglund, and Yajnaseni Chakraborti for their valuable help with testing the package and documentation. The development of this package was part of a research project supported by National Institutes of Health grants P50 DA039838 from the National Institute of Drug Abuse and 1R01 CA229542-01 from the National Cancer Institute and the NIH Office of Behavioral and Social Science Research. Content is solely the responsibility of the authors and does not necessarily represent the official views of the funding institutions mentioned above. This software is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
Author: John J. Dziak [aut, cre] (<https://orcid.org/0000-0003-0762-5495>), Donna L. Coffman [aut] (<https://orcid.org/0000-0001-6305-6579>), Runze Li [aut] (<https://orcid.org/0000-0002-0154-2202>), Kaylee Litson [aut] (<https://orcid.org/0000-0003-1296-4811>), Yajnaseni Chakraborti [aut]
Maintainer: John J. Dziak <dziakj1@gmail.com>

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Package MKdescr updated to version 0.7 with previous version 0.6 dated 2020-10-18

Title: Descriptive Statistics
Description: Computation of standardized interquartile range (IQR), Huber-type skipped mean (Hampel (1985), <doi:10.2307/1268758>), robust coefficient of variation (CV) (Arachchige et al. (2019), <arXiv:1907.01110>), robust signal to noise ratio (SNR), z-score, standardized mean difference (SMD), as well as functions that support graphical visualization such as boxplots based on quartiles (not hinges), negative logarithms and generalized logarithms for 'ggplot2' (Wickham (2016), ISBN:978-3-319-24277-4).
Author: Matthias Kohl [aut, cre] (<https://orcid.org/0000-0001-9514-8910>)
Maintainer: Matthias Kohl <Matthias.Kohl@stamats.de>

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Package mcmcr updated to version 0.6.0 with previous version 0.5.0 dated 2021-02-11

Title: Manipulate MCMC Samples
Description: Functions and classes to store, manipulate and summarise Monte Carlo Markov Chain (MCMC) samples. For more information see Brooks et al. (2011) <isbn:978-1-4200-7941-8>.
Author: Joe Thorley [aut, cre] (<https://orcid.org/0000-0002-7683-4592>), Poisson Consulting [cph, fnd]
Maintainer: Joe Thorley <joe@poissonconsulting.ca>

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Package lessR updated to version 4.0.2 with previous version 4.0.1 dated 2021-06-06

Title: Less Code, More Results
Description: Each function accomplishes the work of several or more standard R functions. For example, two function calls, Read() and CountAll(), read the data and generate summary statistics for all variables in the data frame, plus histograms and bar charts as appropriate. Other functions provide for descriptive statistics, a comprehensive regression analysis, analysis of variance and t-test, plotting including the introduced here Violin/Box/Scatter plot for a numerical variable, bar chart, histogram, box plot, density curves, calibrated power curve, reading multiple data formats with the same function call, variable labels, color themes, Trellis graphics and a built-in help system. Also includes a confirmatory factor analysis of multiple indicator measurement models, pedagogical routines for data simulation such as for the Central Limit Theorem, and generation and rendering of R markdown instructions for interpretative output.
Author: David Gerbing, The School of Business, Portland State University
Maintainer: David W. Gerbing <gerbing@pdx.edu>

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Package gwsem updated to version 2.1.1 with previous version 2.1.0 dated 2021-03-11

Title: Genome-Wide Structural Equation Modeling
Description: Melds genome-wide association tests with structural equation modeling (SEM) using 'OpenMx'. This package contains low-level C/C++ code to rapidly read genetic data encoded in U.K. Biobank or 'plink' formats. Prebuilt modeling options include one and two factor models. Alternately, analyses may utilize arbitrary, user-provided SEMs. See Verhulst, Maes, & Neale (2017) <doi:10.1007/s10519-017-9842-6> for details. An updated manuscript is in preparation.
Author: Joshua N. Pritikin [aut, cre], Bradley Verhulst [cph], Gavin Band [cph], Yann Collet [cph], Facebook, Inc. [cph], Yuta Mori [cph], Shaun Purcell [cph], Christopher Chang [cph], Wojciech Mula [cph], Kim Walisch [cph]
Maintainer: Joshua N. Pritikin <jpritikin@pobox.com>

Diff between gwsem versions 2.1.0 dated 2021-03-11 and 2.1.1 dated 2021-08-05

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Permanent link

Package spectrolab updated to version 0.0.13 with previous version 0.0.12 dated 2021-06-01

Title: Class and Methods for Spectral Data
Description: Input/Output, processing and visualization of spectra taken with different spectrometers, including SVC (Spectra Vista), ASD and PSR (Spectral Evolution). Implements an S3 class 'spectra' that other packages can build on. Provides methods to access, plot, manipulate, splice sensor overlap, vector normalize and smooth spectra.
Author: Jose Eduardo Meireles [aut, cre], Anna K. Schweiger [aut], Jeannine Cavender-Bares [aut]
Maintainer: Jose Eduardo Meireles <jemeireles@gmail.com>

Diff between spectrolab versions 0.0.12 dated 2021-06-01 and 0.0.13 dated 2021-08-05

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Permanent link

Package sdcHierarchies updated to version 0.19.1 with previous version 0.19.0 dated 2021-07-20

Title: Create and (Interactively) Modify Nested Hierarchies
Description: Provides functionality to generate, (interactively) modify (by adding, removing and renaming nodes) and convert nested hierarchies between different formats. These tree like structures can be used to define for example complex hierarchical tables used for statistical disclosure control.
Author: Bernhard Meindl [aut, cre]
Maintainer: Bernhard Meindl <Bernhard.Meindl@statistik.gv.at>

Diff between sdcHierarchies versions 0.19.0 dated 2021-07-20 and 0.19.1 dated 2021-08-05

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Package sars updated to version 1.3.5 with previous version 1.3.4 dated 2021-05-23

Title: Fit and Compare Species-Area Relationship Models Using Multimodel Inference
Description: Implements the basic elements of the multi-model inference paradigm for up to twenty species-area relationship models (SAR), using simple R list-objects and functions, as in Triantis et al. 2012 <DOI:10.1111/j.1365-2699.2011.02652.x>. The package is scalable and users can easily create their own model and data objects. Additional SAR related functions are provided.
Author: Thomas J. Matthews [aut, cre] (<https://orcid.org/0000-0002-7624-244X>), Francois Guilhaumon [aut] (<https://orcid.org/0000-0003-4707-8932>), Kevin Cazelles [rev] (<https://orcid.org/0000-0001-6619-9874>)
Maintainer: Thomas J. Matthews <txm676@gmail.com>

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Package mlr3 updated to version 0.12.0 with previous version 0.11.0 dated 2021-03-05

Title: Machine Learning in R - Next Generation
Description: Efficient, object-oriented programming on the building blocks of machine learning. Provides 'R6' objects for tasks, learners, resamplings, and measures. The package is geared towards scalability and larger datasets by supporting parallelization and out-of-memory data-backends like databases. While 'mlr3' focuses on the core computational operations, add-on packages provide additional functionality.
Author: Michel Lang [cre, aut] (<https://orcid.org/0000-0001-9754-0393>), Bernd Bischl [aut] (<https://orcid.org/0000-0001-6002-6980>), Jakob Richter [aut] (<https://orcid.org/0000-0003-4481-5554>), Patrick Schratz [aut] (<https://orcid.org/0000-0003-0748-6624>), Giuseppe Casalicchio [ctb] (<https://orcid.org/0000-0001-5324-5966>), Stefan Coors [ctb] (<https://orcid.org/0000-0002-7465-2146>), Quay Au [ctb] (<https://orcid.org/0000-0002-5252-8902>), Martin Binder [aut], Marc Becker [ctb] (<https://orcid.org/0000-0002-8115-0400>)
Maintainer: Michel Lang <michellang@gmail.com>

Diff between mlr3 versions 0.11.0 dated 2021-03-05 and 0.12.0 dated 2021-08-05

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Package gitlabr updated to version 2.0.0 with previous version 1.1.6 dated 2019-03-15

Title: Access to the 'Gitlab' API
Description: Provides R functions to access the API of the project and repository management web application 'GitLab'. For many common tasks (repository file access, issue assignment and status, commenting) convenience wrappers are provided, and in addition the full API can be used by specifying request locations. 'GitLab' is open-source software and can be self-hosted or used on <https://about.gitlab.com>.
Author: Jirka Lewandowski [aut], Sébastien Rochette [aut, cre] (<https://orcid.org/0000-0002-1565-9313>)
Maintainer: Sébastien Rochette <sebastien@thinkr.fr>

Diff between gitlabr versions 1.1.6 dated 2019-03-15 and 2.0.0 dated 2021-08-05

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Package primePCA updated to version 1.2 with previous version 1.1 dated 2021-05-31

Title: Projected Refinement for Imputation of Missing Entries in PCA
Description: Implements the primePCA algorithm, developed and analysed in Zhu, Z., Wang, T. and Samworth, R. J. (2019) High-dimensional principal component analysis with heterogeneous missingness. <arXiv:1906.12125>.
Author: Ziwei Zhu, Tengyao Wang, Richard J. Samworth
Maintainer: Ziwei Zhu <ziweiz@umich.edu>

Diff between primePCA versions 1.1 dated 2021-05-31 and 1.2 dated 2021-08-05

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 R/code_full_new.R |    2 +-
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Package spaMM updated to version 3.8.23 with previous version 3.8.9 dated 2021-06-28

Title: Mixed-Effect Models, Particularly Spatial Models
Description: Inference based on mixed-effect models, including generalized linear mixed models with spatial correlations, multivariate responses, and models with non-Gaussian random effects (e.g., Beta). Various approximations of likelihood or restricted likelihood are implemented, in particular Laplace approximation and h-likelihood (Lee and Nelder 2001 <doi:10.1093/biomet/88.4.987>). Both classical geostatistical models, and Markov random field models on irregular grids (as considered in the 'INLA' package, <https://www.r-inla.org>), can be fitted. Variation in residual variance (heteroscedasticity) can itself be represented by a mixed-effect model.
Author: François Rousset [aut, cre, cph] (<https://orcid.org/0000-0003-4670-0371>), Jean-Baptiste Ferdy [aut, cph], Alexandre Courtiol [aut] (<https://orcid.org/0000-0003-0637-2959>), GSL authors [ctb] (src/gsl_bessel.*)
Maintainer: François Rousset <francois.rousset@umontpellier.fr>

Diff between spaMM versions 3.8.9 dated 2021-06-28 and 3.8.23 dated 2021-08-05

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Package RApiDatetime updated to version 0.0.5 with previous version 0.0.4 dated 2018-10-21

Title: R API Datetime
Description: Access to the C-level R date and datetime code is provided for C-level API use by other packages via registration of native functions. Client packages simply include a single header 'RApiDatetime.h' provided by this package, and also 'import' it. The R Core group is the original author of the code made available with slight modifications by this package.
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel <edd@debian.org>

Diff between RApiDatetime versions 0.0.4 dated 2018-10-21 and 0.0.5 dated 2021-08-05

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Package bbmle updated to version 1.0.24 with previous version 1.0.23.1 dated 2020-02-03

Title: Tools for General Maximum Likelihood Estimation
Description: Methods and functions for fitting maximum likelihood models in R. This package modifies and extends the 'mle' classes in the 'stats4' package.
Author: Ben Bolker [aut, cre], R Development Core Team [aut], Iago Giné-Vázquez [ctb]
Maintainer: Ben Bolker <bolker@mcmaster.ca>

Diff between bbmle versions 1.0.23.1 dated 2020-02-03 and 1.0.24 dated 2021-08-05

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Package pomdp updated to version 0.99.3 with previous version 0.99.1 dated 2021-05-14

Title: Solver for Partially Observable Markov Decision Processes (POMDP)
Description: Provides the infrastructure to define and analyze the solutions of Partially Observable Markov Decision Processes (POMDP) models. The package includes pomdp-solve to solve POMDPs using a variety of exact and approximate value iteration algorithms. Smallwood and Sondik (1973) <doi:10.1287/opre.21.5.1071>.
Author: Michael Hahsler [aut, cph, cre], Hossein Kamalzadeh [aut, cph], Anthony R. Cassandra [ctb, cph]
Maintainer: Michael Hahsler <mhahsler@lyle.smu.edu>

Diff between pomdp versions 0.99.1 dated 2021-05-14 and 0.99.3 dated 2021-08-05

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Package movecost updated to version 1.3 with previous version 1.2 dated 2021-07-07

Title: Calculation of Slope-Dependant Accumulated Cost Surface, Least-Cost Paths, and Least-Cost Corridors Related to Human Movement Across the Landscape
Description: Provides the facility to calculate non-isotropic accumulated cost surface, least-cost paths, and least-cost corridors using a number of human-movement-related cost functions that can be selected by the user. It just requires a Digital Terrain Model, a start location and (optionally) destination locations. See Alberti (2019) <doi:10.1016/j.softx.2019.100331>.
Author: Gianmarco Alberti [aut, cre]
Maintainer: Gianmarco Alberti <gianmarcoalberti@gmail.com>

Diff between movecost versions 1.2 dated 2021-07-07 and 1.3 dated 2021-08-05

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Package SpatialBSS updated to version 0.11-0 with previous version 0.10-0 dated 2021-05-07

Title: Blind Source Separation for Multivariate Spatial Data
Description: Blind source separation for multivariate spatial data based on simultaneous/joint diagonalization of local covariance matrices. This package is an implementation of the methods described in Bachoc, Genton, Nordhausen, Ruiz-Gazen and Virta (2020) <doi:10.1093/biomet/asz079>.
Author: Christoph Muehlmann [aut, cre] (<https://orcid.org/0000-0001-7330-8434>), Klaus Nordhausen [aut] (<https://orcid.org/0000-0002-3758-8501>), Joni Virta [aut] (<https://orcid.org/0000-0002-2150-2769>)
Maintainer: Christoph Muehlmann <christoph.muehlmann@tuwien.ac.at>

Diff between SpatialBSS versions 0.10-0 dated 2021-05-07 and 0.11-0 dated 2021-08-05

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New package FCVAR with initial version 0.1.0
Package: FCVAR
Title: Estimation and Inference for the Fractionally Cointegrated VAR
Version: 0.1.0
Description: Estimation and inference using the Fractionally Cointegrated Vector Autoregressive (VAR) model. It includes functions for model specification, including lag selection and cointegration rank selection, as well as a comprehensive set of options for hypothesis testing, including tests of hypotheses on the cointegrating relations, the adjustment coefficients and the fractional differencing parameters. An article describing the FCVAR model with examples is available on the Webpage <https://sites.google.com/view/mortennielsen/software>.
Depends: R (>= 3.5)
Imports: pracma, fracdist
URL: https://github.com/LeeMorinUCF/FCVAR
BugReports: https://github.com/LeeMorinUCF/FCVAR/issues
License: GPL-3
Encoding: UTF-8
LazyData: true
Language: en-US
Suggests: knitr, rmarkdown, testthat
NeedsCompilation: no
Packaged: 2021-08-04 20:40:09 UTC; le279259
Author: Lealand Morin [aut, cre] (<https://orcid.org/0000-0001-8539-1386>), Morten Nielsen [aut] (<https://orcid.org/0000-0002-1337-9844>), Michal Popiel [aut]
Maintainer: Lealand Morin <lealand.morin@ucf.edu>
Repository: CRAN
Date/Publication: 2021-08-05 09:20:02 UTC

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New package icardaFIGSr with initial version 1.0.1
Package: icardaFIGSr
Title: Subsetting using Focused Identification of the Germplasm Strategy (FIGS)
Version: 1.0.1
Description: Running Focused Identification of the Germplasm Strategy (FIGS) to make best subsets from Genebank Collection.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Imports: caret, doParallel, dplyr, ggplot2, RGtk2, gWidgets2RGtk2, gWidgets2, foreach, httr, magrittr, methods, plotROC, plyr, raster, reshape2, sp, leaflet
Suggests:
NeedsCompilation: no
Packaged: 2021-08-04 16:22:08 UTC; azizk
Depends: R (>= 3.5.0)
Author: Khadija Aziz [aut], Zakaria Kehel [aut, cre], Bancy Ngatia [aut], Khadija Aouzal [aut], Zainab Azough [ctb], Amal Ibnelhobyb [ctb], Fawzy Nawar [ctb]
Maintainer: Zakaria Kehel <z.kehel@cgiar.org>
Repository: CRAN
Date/Publication: 2021-08-05 08:40:02 UTC

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New package EPP with initial version 0.3.2
Package: EPP
Title: Evaluation of Proximity Programs
Version: 0.3.2
Date: 2021-08-04
Maintainer: Richard Detomasi <richard.detomasi@gmail.com>
Description: A toolbox for coverage evaluation of proximity programs.
BugReports: https://github.com/RichDeto/EPP/issues
SystemRequirements: GDAL (>= 3.0.2), GEOS (>= 3.8.0), PROJ (>= 6.2.1)
Depends: R (>= 3.5.0)
Language: en
Imports: sp, rgeos, maptools, flexclust, plyr, osrm, deldir, methods, dplyr, rgdal, leaflet, leaflet.extras, sf
Suggests: knitr, devtools, roxygen2, markdown, rstudioapi (>= 0.11), testthat (>= 2.3.2), rsvg, gdtools
License: GPL (>= 3)
Encoding: UTF-8
LazyData: TRUE
NeedsCompilation: no
Packaged: 2021-08-04 14:28:25 UTC; rdetomasi
Author: Richard Detomasi [aut, cre] (<https://orcid.org/0000-0002-6725-0261>), German Botto [aut] (<https://orcid.org/0000-0002-4055-9277>)
Repository: CRAN
Date/Publication: 2021-08-05 08:30:02 UTC

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New package doMIsaul with initial version 1.0.0
Package: doMIsaul
Title: Do Multiple Imputation-Based Semi-Supervised and Unsupervised Learning
Version: 1.0.0
Description: Algorithms for (i) unsupervised learning for dataset with missing data and/or left-censored data, using multiple imputation and consensus clustering ; (ii) semi-supervised learning with a survival endpoint (right-censored) for complete or incomplete datasets, using multiple imputation and consensus clustering in the latter case. The methods are described in Faucheux et al. (2021) <doi:10.1002/bimj.201900366> and Faucheux et al. (2021) <doi:10.1002/bimj.202000365>, respectively.
License: GPL (>= 3)
URL: https://github.com/LilithF/doMIsaul
BugReports: https://github.com/LilithF/doMIsaul/issues
Imports: aricode, arules, clusterCrit, dplyr, ggplot2, Gmedian, graphics, MASS, methods, mice, NbClust, ncvreg, plyr, scales, stats, survival, utils, withr
Suggests: censReg, cluster, CPE, dbscan, e1071, ggpubr, Hmisc, igraph, mclust, parallel, RColorBrewer, reshape2, testthat (>= 3.0.0), timeROC, truncnorm
Encoding: UTF-8
Language: en-US
NeedsCompilation: no
Packaged: 2021-08-04 13:40:03 UTC; lfaucheux
Author: Lilith Faucheux [aut, cre], Sylvie Chevret [ths], Matthieu Resche-Rigon [ctb], Marie Perrot-Dockès [ctb], Eric Han [ctb]
Maintainer: Lilith Faucheux <lilith.faucheux@inserm.fr>
Repository: CRAN
Date/Publication: 2021-08-05 08:20:02 UTC

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New package track2KBA with initial version 1.0.0
Package: track2KBA
Title: Identifying Important Areas from Animal Tracking Data
Version: 1.0.0
URL: https://github.com/BirdLifeInternational/track2kba
Description: Functions for preparing and analyzing animal tracking data, with the intention of identifying areas which are potentially important at the population level and therefore of conservation interest. Areas identified using this package may be checked against global or regionally-defined criteria, such as those set by the Key Biodiversity Area program. The method published herein is an optimized and updated version of the method described in Lascelles et al. 2016 <doi:10.1111/ddi.12411>.
Depends: R (>= 2.10)
License: LGPL-3
Encoding: UTF-8
LazyData: true
BugReports: https://github.com/BirdLifeInternational/track2kba/issues
Suggests: adehabitatLT, doParallel, knitr, maps, Matching, move, parallel, rmarkdown, tinytest
VignetteBuilder: knitr
Imports: adehabitatHR, dplyr, foreach, geosphere, ggplot2, lubridate, magrittr, maptools, methods, purrr, raster, rgeos, rgdal (>= 1.5-0), rlang, sf (>= 0.7-4), sp (>= 1.4-1), tidyr
NeedsCompilation: no
Packaged: 2021-08-04 08:30:19 UTC; Martim Bill
Author: Martin Beal [cre] (<https://orcid.org/0000-0003-1654-1410>), Steffen Oppel [aut] (<https://orcid.org/0000-0003-1654-1410>), Maria Dias [aut] (<https://orcid.org/0000-0002-7281-4391>), Mark Miller [ctb], Phillip Taylor [ctb], Virginia Morera-Pujol [ctb] (<https://orcid.org/0000-0001-6500-5548>), Elizabeth Pearmain [ctb] (<https://orcid.org/0000-0002-6600-1482>), Jonathan Handley [ctb] (<https://orcid.org/0000-0001-6468-338X>), Ben Lascelles [ctb]
Maintainer: Martin Beal <martinbeal88@gmail.com>
Repository: CRAN
Date/Publication: 2021-08-05 07:50:01 UTC

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New package symphony with initial version 0.1.0
Package: symphony
Title: Efficient and Precise Single-Cell Reference Atlas Mapping
Version: 0.1.0
Description: Implements the Symphony single-cell reference building and query mapping algorithms and additional functions described in Kang et al <https://www.biorxiv.org/content/10.1101/2020.11.18.389189v2>.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
Suggests: knitr, rmarkdown, testthat, ggthemes
LinkingTo: Rcpp, RcppArmadillo
Imports: methods, Rcpp, harmony, uwot, irlba, class, purrr, dplyr, ggplot2, stats, utils, magrittr, data.table, tibble, Matrix, tidyr, rlang, RColorBrewer, ggrastr, ggrepel, RANN
VignetteBuilder: knitr
Depends: R (>= 2.10)
NeedsCompilation: yes
Packaged: 2021-08-04 06:09:36 UTC; jbk37
Author: Joyce Kang [aut, cre] (<https://orcid.org/0000-0002-1962-1291>), Ilya Korsunsky [aut] (<https://orcid.org/0000-0003-4848-3948>), Soumya Raychaudhuri [aut] (<https://orcid.org/0000-0002-1901-8265>)
Maintainer: Joyce Kang <joyce_kang@hms.harvard.edu>
Repository: CRAN
Date/Publication: 2021-08-05 07:50:05 UTC

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Package prettifyAddins updated to version 2.1.1 with previous version 2.0.3 dated 2020-11-16

Title: 'RStudio' Addins to Prettify 'JavaScript', 'C++', 'Python', and More
Description: Provides 'RStudio' addins to prettify 'HTML', 'CSS', 'SCSS', 'JavaScript', 'JSX', 'Markdown', 'C(++)', 'LaTeX', 'Python', 'Julia', 'XML', 'Java', 'JSON', 'Ruby', and to reindent 'C(++)', 'Fortran', 'Java', 'Julia', 'Python', 'SAS', 'Scala', 'Shell' and 'SQL'. Two kinds of addins are provided: 'Prettify' and 'Indent'. The 'Indent' addins only reindent the code, while the 'Prettify' addins also modify the code, e.g. trailing semi-colons are added to 'JavaScript' code when they are missing.
Author: Stéphane Laurent [aut, cre], James Long and contributors [ctb, cph] ('Prettier' library), Zeb Zhao [ctb, cph] ('indent.js' library), Marijn Haverbeke [ctb, cph] ('CodeMirror' library)
Maintainer: Stéphane Laurent <laurent_step@outlook.fr>

Diff between prettifyAddins versions 2.0.3 dated 2020-11-16 and 2.1.1 dated 2021-08-05

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New package PICBayes with initial version 1.0
Package: PICBayes
Title: Bayesian Models for Partly Interval-Censored Data
Version: 1.0
Date: 2021-08-04
Author: Chun Pan
Maintainer: Chun Pan <chunpan2003@hotmail.com>
Description: Contains functions to fit proportional hazards (PH) model to partly interval-censored (PIC) data (Pan et al. (2020) <doi:10.1177/0962280220921552>), PH model with spatial frailty to spatially dependent PIC data (Pan and Cai (2021) <doi:10.1080/03610918.2020.1839497>), and mixed effects PH model to clustered PIC data. Each random intercept/random effect can follow both a normal prior and a Dirichlet process mixture prior. It also includes the corresponding functions for general interval-censored data.
License: GPL (>= 2)
Depends: R (>= 3.5.0), coda, MCMCpack, survival
LazyLoad: yes
NeedsCompilation: no
Packaged: 2021-08-04 10:16:58 UTC; Chun
Repository: CRAN
Date/Publication: 2021-08-05 07:50:17 UTC

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Package OmicNavigator updated to version 1.4.3 with previous version 1.4.2 dated 2021-07-26

Title: Open-Source Software for 'Omic' Data Analysis and Visualization
Description: A tool for interactive exploration of the results from 'omics' experiments to facilitate novel discoveries from high-throughput biology. The software includes R functions for the 'bioinformatician' to deposit study metadata and the outputs from statistical analyses (e.g. differential expression, enrichment). These results are then exported to an interactive JavaScript dashboard that can be interrogated on the user’s local machine or deployed online to be explored by collaborators. The dashboard includes 'sortable' tables, interactive plots including network visualization, and fine-grained filtering based on statistical significance.
Author: Terrence Ernst [aut] (Web application), John Blischak [aut, cre] (<https://orcid.org/0000-0003-2634-9879>), Paul Nordlund [aut] (Web application), Justin Moore [aut] (UpSet-related functions and web application), Joe Dalen [aut] (Barcode functionality and web application), Akshay Bhamidipati [aut] (Web application), Brett Engelmann [aut], AbbVie Inc. [cph, fnd]
Maintainer: John Blischak <jdblischak@gmail.com>

Diff between OmicNavigator versions 1.4.2 dated 2021-07-26 and 1.4.3 dated 2021-08-05

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New package handwriter with initial version 1.0.0
Package: handwriter
Title: Handwriting Analysis in R
Version: 1.0.0
Maintainer: James Taylor <jamesetay1@gmail.com>
Description: Process handwriting document into letters, words, and lines. Provides measurements at all levels. Webpage provided at: <https://csafe-isu.github.io/handwriter/index.html>.
Depends: R (>= 3.1)
LinkingTo: Rcpp, RcppArmadillo
License: GPL-3
Encoding: UTF-8
LazyData: true
Imports: Rcpp, ggplot2, igraph, png, reshape2, stringr, rjson, magick, shiny, data.table, randomForest
NeedsCompilation: yes
Packaged: 2021-08-04 03:04:56 UTC; James
Author: Nick Berry [aut], James Taylor [cre, aut], Felix Baez-Santiago [aut]
Repository: CRAN
Date/Publication: 2021-08-05 07:50:08 UTC

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Package disordR updated to version 0.0-7 with previous version 0.0-2 dated 2021-06-28

Title: Non-Ordered Vectors
Description: Functionality for manipulating values of associative maps. Ordinary R vectors are unsuitable for working with values of associative maps because elements of an R vector may be accessed by reference to their location in the vector, but associative maps are stored in arbitrary order. However, when associating keys with values one needs both parts to be in 1-1 correspondence, so one cannot dispense with the order entirely. The 'disordR' package includes a single S4 class, disord. This class allows one to perform only those operations appropriate for manipulating values of associative maps and prevents any other operation (such as accessing an element at a particular location). A useful heuristic is that one is only allowed to access or modify a disord object using a python list comprehension. The idea is to prevent ill-defined operations on values (or keys) of associative maps, whose order is undefined or at best implementation-specific, while allowing and facilitating sensible operations. The package is needed for development versions of 'mvp', 'hyper2', 'spray', 'clifford', and 'freealg'.
Author: Robin K. S. Hankin [aut, cre] (<https://orcid.org/0000-0001-5982-0415>)
Maintainer: Robin K. S. Hankin <hankin.robin@gmail.com>

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New package curtailment with initial version 0.1.1
Package: curtailment
Title: Finds Binary Outcome Designs Using Stochastic Curtailment
Version: 0.1.1
Maintainer: Martin Law <martin.law@mrc-bsu.cam.ac.uk>
Description: Finds single- and two-arm designs using stochastic curtailment, as described by Law et al. (2019) <arXiv:1909.03017> and Law et al. (2021) <doi:10.1002/pst.2067> respectively. Designs can be single-stage or multi-stage. Non-stochastic curtailment is possible as a special case. Desired error-rates, maximum sample size and lower and upper anticipated response rates are inputted and suitable designs are returned with operating characteristics. Stopping boundaries and visualisations are also available. The package can find designs using other approaches, for example designs by Simon (1989) <doi:10.1016/0197-2456(89)90015-9> and Mander and Thompson (2010) <doi:10.1016/j.cct.2010.07.008>. Other features: compare and visualise designs using a weighted sum of expected sample sizes under the null and alternative hypotheses and maximum sample size; visualise any binary outcome design.
License: GPL (>= 3)
Encoding: UTF-8
Imports: ggplot2, gridExtra, ggthemes, data.table, pkgcond, stats
NeedsCompilation: no
Packaged: 2021-08-04 07:52:05 UTC; Owner
Author: Martin Law [aut, cre] (<https://orcid.org/0000-0001-9594-348X>)
Repository: CRAN
Date/Publication: 2021-08-05 07:50:14 UTC

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Package vapour updated to version 0.7.7 with previous version 0.7.6 dated 2021-08-02

Title: Lightweight Access to the 'Geospatial Data Abstraction Library' ('GDAL')
Description: Provides low-level access to 'GDAL' functionality for R packages. 'GDAL' is the 'Geospatial Data Abstraction Library' a translator for raster and vector geospatial data formats that presents a single raster abstract data model and single vector abstract data model to the calling application for all supported formats <https://gdal.org/>.
Author: Michael Sumner [aut, cre] (<https://orcid.org/0000-0002-2471-7511>), Simon Wotherspoon [ctb] (figured out the mechanism for the resampling algorithm), Mark Padgham [ctb] (helped get started :)), Edzer Pebesma [ctb] (wrote allocate_attribute, copied here from sf), Roger Bivand [ctb] (wrote configure.ac, adapted here from rgdal), Jim Hester [ctb] (wrote CollectorList.h, copied here from fs package), Timothy Keitt [ctb] (wrote GetPointsInternal copied here from rgdal2 package), Jeroen Ooms [ctb] (tweaked build process, provided Windows build tools), Dale Maschette [ctb] (created the hex logo), Joseph Stachelek [ctb], Even Rouault [ctb] (primary author of the COG format and its use of the GDALwarp app-library, example code used by the warper function here), Robert Hijmans [ctb] (wrote some source in the warper, terra package used as example/inspiration)
Maintainer: Michael Sumner <mdsumner@gmail.com>

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Package terrainr updated to version 0.5.0 with previous version 0.4.1 dated 2021-05-30

Title: Landscape Visualizations in R and 'Unity'
Description: Functions for the retrieval, manipulation, and visualization of 'geospatial' data, with an aim towards producing '3D' landscape visualizations in the 'Unity' '3D' rendering engine. Functions are also provided for retrieving elevation data and base map tiles from the 'USGS' National Map ('<https://apps.nationalmap.gov/services/>').
Author: Michael Mahoney [aut, cre] (<https://orcid.org/0000-0003-2402-304X>), Mike Johnson [rev] (Mike reviewed the package (v. 0.2.1) for rOpenSci, see <https://github.com/ropensci/software-review/issues/416>), Sydney Foks [rev] (Sydney reviewed the package (v. 0.2.1) for rOpenSci, see <https://github.com/ropensci/software-review/issues/416>)
Maintainer: Michael Mahoney <mike.mahoney.218@gmail.com>

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Permanent link

Package raveio updated to version 0.0.4 with previous version 0.0.3 dated 2020-08-14

Title: Utility Toolbox for RAVE Project
Description: Includes multiple cross-platform read/write interfaces for 'RAVE' project. 'RAVE' stands for "R analysis and visualization of human intracranial electroencephalography data". The whole project aims at providing powerful free-source package that analyze brain recordings from patients with electrodes placed on the cortical surface or inserted into the brain. 'raveio' as part of this project provides tools to read/write neurophysiology data from/to 'RAVE' file structure, as well as several popular formats including 'EDF(+)', 'Matlab', 'BIDS-iEEG', and 'HDF5', etc. Documentation and examples about 'RAVE' project are provided at <https://openwetware.org/wiki/RAVE>, and the paper by John F. Magnotti, Zhengjia Wang, Michael S. Beauchamp (2020) <doi:10.1016/j.neuroimage.2020.117341>; see 'citation("raveio")' for details.
Author: Zhengjia Wang [aut, cre], Beauchamp lab [cph, fnd]
Maintainer: Zhengjia Wang <dipterix.wang@gmail.com>

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 raveio-0.0.4/raveio/tests/testthat/test-preprocess-v2.R |    2 
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New package diffeqr with initial version 1.1.1
Package: diffeqr
Title: Solving Differential Equations (ODEs, SDEs, DDEs, DAEs)
Version: 1.1.1
Description: An interface to 'DifferentialEquations.jl' <https://diffeq.sciml.ai/dev/> from the R programming language. It has unique high performance methods for solving ordinary differential equations (ODE), stochastic differential equations (SDE), delay differential equations (DDE), differential-algebraic equations (DAE), and more. Much of the functionality, including features like adaptive time stepping in SDEs, are unique and allow for multiple orders of magnitude speedup over more common methods. 'diffeqr' attaches an R interface onto the package, allowing seamless use of this tooling by R users. For more information, see Rackauckas and Nie (2017) <doi:10.5334/jors.151>.
Depends: R (>= 3.4.0)
Encoding: UTF-8
License: MIT + file LICENSE
URL: https://github.com/SciML/diffeqr
SystemRequirements: Julia (>= 1.5), DifferentialEquations.jl, ModelingToolkit.jl
Imports: JuliaCall
Suggests: testthat, knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2021-08-04 12:24:33 UTC; accou
Author: Christopher Rackauckas [aut, cre, cph]
Maintainer: Christopher Rackauckas <me@chrisrackauckas.com>
Repository: CRAN
Date/Publication: 2021-08-05 06:20:09 UTC

More information about diffeqr at CRAN
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Package gss updated to version 2.2-3 with previous version 2.2-2 dated 2020-05-26

Title: General Smoothing Splines
Description: A comprehensive package for structural multivariate function estimation using smoothing splines.
Author: Chong Gu <chong@purdue.edu>
Maintainer: Chong Gu <chong@purdue.edu>

Diff between gss versions 2.2-2 dated 2020-05-26 and 2.2-3 dated 2021-08-05

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Package ComplexUpset updated to version 1.3.1 with previous version 1.3.0 dated 2021-06-06

Title: Create Complex UpSet Plots Using 'ggplot2' Components
Description: UpSet plots are an improvement over Venn Diagram for set overlap visualizations. Striving to bring the best of the 'UpSetR' and 'ggplot2', this package offers a way to create complex overlap visualisations, using simple and familiar tools, i.e. geoms of 'ggplot2'. For introduction to UpSet concept, see Lex et al. (2014) <doi:10.1109/TVCG.2014.2346248>.
Author: Michał Krassowski [aut, cre] (<https://orcid.org/0000-0002-9638-7785>)
Maintainer: Michał Krassowski <krassowski.michal+r@gmail.com>

Diff between ComplexUpset versions 1.3.0 dated 2021-06-06 and 1.3.1 dated 2021-08-05

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Package adapt4pv updated to version 0.2-0 with previous version 0.1.0 dated 2020-06-24

Title: Adaptive Approaches for Signal Detection in Pharmacovigilance
Description: A collection of several pharmacovigilance signal detection methods based on adaptive lasso. Additional lasso-based and propensity score-based signal detection approaches are also supplied.
Author: Emeline Courtois [cre], Ismaïl Ahmed [aut], Hervé Perdry [ctb]
Maintainer: Emeline Courtois <emeline.courtois@inserm.fr>

Diff between adapt4pv versions 0.1.0 dated 2020-06-24 and 0.2-0 dated 2021-08-05

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Package turboEM updated to version 2021.1 with previous version 2020.1 dated 2020-01-13

Title: A Suite of Convergence Acceleration Schemes for EM, MM and Other Fixed-Point Algorithms
Description: Algorithms for accelerating the convergence of slow, monotone sequences from smooth, contraction mapping such as the EM and MM algorithms. It can be used to accelerate any smooth, linearly convergent acceleration scheme. A tutorial style introduction to this package is available in a vignette on the CRAN download page or, when the package is loaded in an R session, with vignette("turboEM").
Author: Jennifer F. Bobb [aut], Ravi Varadhan [aut, cre], Hui Zhao [ctb]
Maintainer: Ravi Varadhan <ravi.varadhan@jhu.edu>

Diff between turboEM versions 2020.1 dated 2020-01-13 and 2021.1 dated 2021-08-05

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Package stringx updated to version 0.1.3 with previous version 0.1.2 dated 2021-07-28

Title: Drop-in Replacements for Base String Functions Powered by 'stringi'
Description: English is the native language for only 5% of the World population. Also, only 17% of us can understand this text. Moreover, the Latin alphabet is the main one for merely 36% of the total. The early computer era, now a very long time ago, was dominated by the US. Due to the proliferation of the internet, smartphones, social media, and other technologies and communication platforms, this is no longer the case. This package replaces base R string functions (such as grep(), tolower(), and sprintf()) with ones that fully support the Unicode standards related to natural language processing, fixes some long-standing inconsistencies, and introduces some new, useful features. Thanks to 'ICU' (International Components for Unicode) and 'stringi', they are fast, reliable, and portable across different platforms.
Author: Marek Gagolewski [aut, cre, cph] (<https://orcid.org/0000-0003-0637-6028>)
Maintainer: Marek Gagolewski <marek@gagolewski.com>

Diff between stringx versions 0.1.2 dated 2021-07-28 and 0.1.3 dated 2021-08-05

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Package rsconnect updated to version 0.8.24 with previous version 0.8.18 dated 2021-05-24

Title: Deployment Interface for R Markdown Documents and Shiny Applications
Description: Programmatic deployment interface for 'RPubs', 'shinyapps.io', and 'RStudio Connect'. Supported content types include R Markdown documents, Shiny applications, Plumber APIs, plots, and static web content.
Author: Jonathan McPherson [aut, cre], JJ Allaire [aut], RStudio [cph, fnd]
Maintainer: Jonathan McPherson <jonathan@rstudio.com>

Diff between rsconnect versions 0.8.18 dated 2021-05-24 and 0.8.24 dated 2021-08-05

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Package reprex updated to version 2.0.1 with previous version 2.0.0 dated 2021-04-02

Title: Prepare Reproducible Example Code via the Clipboard
Description: Convenience wrapper that uses the 'rmarkdown' package to render small snippets of code to target formats that include both code and output. The goal is to encourage the sharing of small, reproducible, and runnable examples on code-oriented websites, such as <https://stackoverflow.com> and <https://github.com>, or in email. The user's clipboard is the default source of input code and the default target for rendered output. 'reprex' also extracts clean, runnable R code from various common formats, such as copy/paste from an R session.
Author: Jennifer Bryan [aut, cre] (<https://orcid.org/0000-0002-6983-2759>), Jim Hester [aut] (<https://orcid.org/0000-0002-2739-7082>), David Robinson [aut], Hadley Wickham [aut] (<https://orcid.org/0000-0003-4757-117X>), RStudio [cph, fnd]
Maintainer: Jennifer Bryan <jenny@rstudio.com>

Diff between reprex versions 2.0.0 dated 2021-04-02 and 2.0.1 dated 2021-08-05

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Package R2jags updated to version 0.7-1 with previous version 0.6-1 dated 2020-04-27

Title: Using R to Run 'JAGS'
Description: Providing wrapper functions to implement Bayesian analysis in JAGS. Some major features include monitoring convergence of a MCMC model using Rubin and Gelman Rhat statistics, automatically running a MCMC model till it converges, and implementing parallel processing of a MCMC model for multiple chains.
Author: Yu-Sung Su <suyusung@tsinghua.edu.cn>, Masanao Yajima <yajima@bu.edu>,
Maintainer: Yu-Sung Su <suyusung@tsinghua.edu.cn>

Diff between R2jags versions 0.6-1 dated 2020-04-27 and 0.7-1 dated 2021-08-05

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Package nlist updated to version 0.3.2 with previous version 0.3.1 dated 2021-02-06

Title: Lists of Numeric Atomic Objects
Description: Create and manipulate numeric list ('nlist') objects. An 'nlist' is an S3 list of uniquely named numeric objects. An numeric object is an integer or double vector, matrix or array. An 'nlists' object is a S3 class list of 'nlist' objects with the same names, dimensionalities and typeofs. Numeric list objects are of interest because they are the raw data inputs for analytic engines such as 'JAGS', 'STAN' and 'TMB'. Numeric lists objects, which are useful for storing multiple realizations of of simulated data sets, can be converted to coda::mcmc and coda::mcmc.list objects.
Author: Joe Thorley [aut, cre] (<https://orcid.org/0000-0002-7683-4592>), Poisson Consulting [cph, fnd]
Maintainer: Joe Thorley <joe@poissonconsulting.ca>

Diff between nlist versions 0.3.1 dated 2021-02-06 and 0.3.2 dated 2021-08-05

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Package MultivariateAnalysis updated to version 0.4.0 with previous version 0.3.0 dated 2021-07-23

Title: Pacote Para Analise Multivariada
Description: Package with multivariate analysis methodologies for experiment evaluation. The package estimates dissimilarity measures, builds dendrograms, obtains MANOVA, principal components, canonical variables, etc. (Pacote com metodologias de analise multivariada para avaliação de experimentos. O pacote estima medidas de dissimilaridade, construi de dendogramas, obtem a MANOVA, componentes principais, variáveis canônicas, etc.)
Author: Alcinei Mistico Azevedo [aut, cre] (<https://orcid.org/0000-0001-5196-0851>)
Maintainer: Alcinei Mistico Azevedo <alcineimistico@hotmail.com>

Diff between MultivariateAnalysis versions 0.3.0 dated 2021-07-23 and 0.4.0 dated 2021-08-05

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Package mlr3pipelines updated to version 0.3.5-1 with previous version 0.3.5 dated 2021-07-06

Title: Preprocessing Operators and Pipelines for 'mlr3'
Description: Dataflow programming toolkit that enriches 'mlr3' with a diverse set of pipelining operators ('PipeOps') that can be composed into graphs. Operations exist for data preprocessing, model fitting, and ensemble learning. Graphs can themselves be treated as 'mlr3' 'Learners' and can therefore be resampled, benchmarked, and tuned.
Author: Martin Binder [aut, cre], Florian Pfisterer [aut] (<https://orcid.org/0000-0001-8867-762X>), Lennart Schneider [aut] (<https://orcid.org/0000-0003-4152-5308>), Bernd Bischl [aut] (<https://orcid.org/0000-0001-6002-6980>), Michel Lang [aut] (<https://orcid.org/0000-0001-9754-0393>), Susanne Dandl [aut]
Maintainer: Martin Binder <mlr.developer@mb706.com>

Diff between mlr3pipelines versions 0.3.5 dated 2021-07-06 and 0.3.5-1 dated 2021-08-05

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Package extras updated to version 0.2.0 with previous version 0.1.0 dated 2020-09-26

Title: Helper Functions for Bayesian Analyses
Description: Functions to 'numericise' 'R' objects (coerce to numeric objects), summarise 'MCMC' (Monte Carlo Markov Chain) samples and calculate deviance residuals as well as 'R' translations of 'BUGS' (Bayesian Using Gibbs Sampling) and 'JAGS' (Just Another Gibbs Sampler) functions.
Author: Joe Thorley [aut, cre] (<https://orcid.org/0000-0002-7683-4592>), Kirill Müller [ctb] (<https://orcid.org/0000-0002-1416-3412>), Nadine Hussein [ctb] (<https://orcid.org/0000-0003-4470-8361>), Poisson Consulting [cph, fnd]
Maintainer: Joe Thorley <joe@poissonconsulting.ca>

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 man/logit.Rd                         |    2 
 man/lower.Rd                         |   11 ++
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 man/params.Rd                        |   34 +++++++
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 tests/testthat/test-as-list.R        |    8 +
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 tests/testthat/test-translations.R   |    2 
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 tests/testthat/test-zscore.R         |    3 
 111 files changed, 492 insertions(+), 119 deletions(-)

More information about extras at CRAN
Permanent link

Package bigrquery updated to version 1.4.0 with previous version 1.3.2 dated 2020-10-05

Title: An Interface to Google's 'BigQuery' 'API'
Description: Easily talk to Google's 'BigQuery' database from R.
Author: Hadley Wickham [aut, cre] (<https://orcid.org/0000-0003-4757-117X>), Jennifer Bryan [aut] (<https://orcid.org/0000-0002-6983-2759>), Kungliga Tekniska Högskolan [ctb] (strptime implementation), The NetBSD Foundation, Inc. [ctb] (gmtime implementation), RStudio [cph, fnd]
Maintainer: Hadley Wickham <hadley@rstudio.com>

Diff between bigrquery versions 1.3.2 dated 2020-10-05 and 1.4.0 dated 2021-08-05

 DESCRIPTION                          |   51 ++---
 MD5                                  |   76 ++++---
 NAMESPACE                            |    1 
 NEWS.md                              |   25 ++
 R/bigrquery.R                        |    1 
 R/bq-auth.R                          |    7 
 R/bq-dataset.R                       |    2 
 R/bq-download.R                      |  356 +++++++++++++++++++++++------------
 R/bq-field.R                         |    2 
 R/bq-job.R                           |    2 
 R/bq-perform.R                       |    3 
 R/bq-project.R                       |    2 
 R/bq-projects.R                      |    2 
 R/bq-table.R                         |    4 
 R/dbi-driver.R                       |    4 
 R/dbi-result.R                       |    8 
 R/dplyr.R                            |    8 
 R/zzz.R                              |    5 
 README.md                            |   90 ++++----
 man/api-dataset.Rd                   |    2 
 man/api-job.Rd                       |    2 
 man/api-perform.Rd                   |    2 
 man/api-project.Rd                   |    2 
 man/api-table.Rd                     |    4 
 man/bigquery.Rd                      |    4 
 man/bigrquery-package.Rd             |    1 
 man/bq_auth.Rd                       |   34 ++-
 man/bq_field.Rd                      |    2 
 man/bq_projects.Rd                   |    2 
 man/bq_table_download.Rd             |   58 +++--
 man/figures                          |only
 src/BqField.cpp                      |    9 
 src/RcppExports.cpp                  |    5 
 tests/testthat/test-bq-download.R    |  126 ++++++++++--
 tests/testthat/test-bq-test.R        |    1 
 tests/testthat/test-dbi-connection.R |    6 
 36 files changed, 598 insertions(+), 311 deletions(-)

More information about bigrquery at CRAN
Permanent link


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