Title: Traveling Salesperson Problem (TSP)
Description: Basic infrastructure and some algorithms for the traveling
salesperson problem (also traveling salesman problem; TSP).
The package provides some simple algorithms and
an interface to the Concorde TSP solver and its implementation of the
Chained-Lin-Kernighan heuristic. The code for Concorde
itself is not included in the package and has to be obtained separately.
Hahsler and Hornik (2007) <doi:10.18637/jss.v023.i02>.
Author: Michael Hahsler [aut, cre, cph],
Kurt Hornik [aut, cph]
Maintainer: Michael Hahsler <mhahsler@lyle.smu.edu>
Diff between TSP versions 1.1-10 dated 2020-04-17 and 1.1-11 dated 2021-10-06
DESCRIPTION | 8 ++--- MD5 | 22 +++++++------- NAMESPACE | 2 - NEWS.md | 5 +++ R/cut_tour.R | 29 ++++++++++-------- R/tsp_concorde.R | 8 ++--- build/vignette.rds |binary inst/CITATION | 1 inst/doc/TSP.pdf |binary man/TOUR.Rd | 2 - src/two_opt.c | 2 - tests/testthat/test-insert_cut_etc.R | 55 +++++++++++++++++++++++++++++++---- 12 files changed, 94 insertions(+), 40 deletions(-)
Title: Reporting Tables
Description: Reporting tables often have structure that goes beyond simple rectangular
data. The 'rtables' package provides a framework for declaring complex multi-level tabulations
and then applying them to data. This framework models both tabulation and the resulting
tables as hierarchical, tree-like objects which support sibling sub-tables, arbitrary splitting
or grouping of data in row and column dimensions, cells containing multiple values,
and the concept of contextual summary computations. A convenient pipe-able interface is provided
for declaring table layouts and the corresponding computations, and then applying them to data.
Author: Gabriel Becker [aut, cre],
Adrian Waddell [aut],
Daniel Sabanés Bové [ctb],
Maximilian Mordig [ctb]
Maintainer: Gabriel Becker <gabembecker@gmail.com>
Diff between rtables versions 0.3.8 dated 2021-07-13 and 0.4.0 dated 2021-10-06
DESCRIPTION | 13 - MD5 | 143 ++++++++------- NAMESPACE | 34 +++ NEWS.md | 24 ++ R/00tabletrees.R | 17 + R/argument_conventions.R | 3 R/as_html.R | 76 +++++--- R/colby_constructors.R | 168 +++++++++-------- R/compare_rtables.R | 182 ++++++++++++++----- R/format_rcell.R | 6 R/index_footnotes.R | 94 +++++++-- R/make_subset_expr.R | 23 -- R/rtable.R | 4 R/split_funs.R | 274 ++++++++++++++++++++++------- R/tree_accessors.R | 263 ++++++++++++++++++++++++--- R/tt_afun_utils.R | 16 + R/tt_compare_tables.R | 35 +++ R/tt_compatibility.R | 301 ++++++++++++++++---------------- R/tt_dotabulation.R | 206 +++++++++++---------- R/tt_export.R | 269 ++++++++++++++++++++++++++-- R/tt_paginate.R | 28 +- R/tt_pos_and_access.R | 264 ++++++++++++++++++++++++---- R/tt_showmethods.R | 63 +++--- R/tt_sort.R | 2 R/tt_toString.R | 109 +++++++++-- inst/doc/baseline.html | 4 inst/doc/clinical_trials.R | 2 inst/doc/clinical_trials.Rmd | 2 inst/doc/clinical_trials.html | 6 inst/doc/introduction.html | 4 inst/doc/manual_table_construction.html | 14 + inst/doc/sorting_pruning.html | 4 inst/doc/subsetting_tables.html | 4 inst/doc/tabulation_dplyr.html | 4 man/MultiVarSplit.Rd | 2 man/VarLevelSplit.Rd | 4 man/add_overall_level.Rd | 4 man/analyze.Rd | 28 ++ man/as_html.Rd | 3 man/avarspl.Rd | 2 man/basic_table.Rd | 6 man/brackets.Rd | 7 man/cell_values.Rd | 12 + man/compare_rtables.Rd | 21 +- man/custom_split_funs.Rd |only man/cutsplits.Rd | 2 man/export_as_pdf.Rd |only man/export_as_txt.Rd | 30 ++- man/insert_row_at_path.Rd |only man/insert_rrow.Rd | 9 man/int_methods.Rd | 62 +++--- man/label_at_path.Rd |only man/lyt_args.Rd | 4 man/make_afun.Rd | 2 man/path_enriched_df.Rd |only man/ref_fnotes.Rd | 36 +++ man/spl_context.Rd |only man/split_cols_by.Rd | 34 +++ man/split_funcs.Rd | 42 +++- man/split_rows_by.Rd | 34 +++ man/summarize_row_groups.Rd | 3 man/trim_levels_to_map.Rd |only man/trim_prune_funs.Rd | 15 + man/tsv_io.Rd | 16 + man/tt_to_flextable.Rd |only man/value_formats.Rd |only tests/testthat/setup-fakedata.R | 50 +++++ tests/testthat/test-binding.R | 5 tests/testthat/test-compare_rtables.R | 72 +++---- tests/testthat/test-formatting.R |only tests/testthat/test-header-footer.R | 71 +++++++ tests/testthat/test-lyt-tabulation.R | 137 ++++++++------ tests/testthat/test-make-afun.R | 7 tests/testthat/test-sort-prune.R | 53 +++++ tests/testthat/test-split_funs.R | 116 ++++++++++-- tests/testthat/test-structure-summary.R |only tests/testthat/test-subset-access.R | 112 +++++++++-- vignettes/clinical_trials.Rmd | 2 78 files changed, 2683 insertions(+), 981 deletions(-)
Title: Robust Adaptive Metropolis Algorithm
Description: Function for adapting the shape of the random walk Metropolis proposal
as specified by robust adaptive Metropolis algorithm by Vihola (2012) <doi:10.1007/s11222-011-9269-5>.
The package also includes fast functions for rank-one Cholesky update and downdate.
These functions can be used directly from R or the corresponding C++ header files
can be easily linked to other R packages.
Author: Jouni Helske [aut, cre] (<https://orcid.org/0000-0001-7130-793X>)
Maintainer: Jouni Helske <jouni.helske@iki.fi>
Diff between ramcmc versions 0.1.1 dated 2021-04-18 and 0.1.2 dated 2021-10-06
DESCRIPTION | 10 ++-- MD5 | 10 ++-- inst/CITATION | 48 +++++++++++----------- inst/doc/ramcmc.html | 10 ++-- src/RcppExports.cpp | 5 ++ vignettes/ramcmc.bib | 110 +++++++++++++++++++++++++-------------------------- 6 files changed, 99 insertions(+), 94 deletions(-)
Title: Multivariate Data Handling with S4 Classes and Sparse Matrices
Description: An S4 update of the 'mefa' package
using sparse matrices for enhanced efficiency.
Sparse array-like objects are supported via
lists of sparse matrices.
Author: Peter Solymos
Maintainer: Peter Solymos <solymos@ualberta.ca>
Diff between mefa4 versions 0.3-7 dated 2020-02-28 and 0.3-8 dated 2021-10-06
DESCRIPTION | 8 ++++---- MD5 | 11 ++++++----- build |only inst/CITATION | 4 ++-- man/abmibirds.Rd | 8 ++++---- man/mefa4-package.Rd | 4 +--- man/r2rmd.Rd | 4 ++-- 7 files changed, 19 insertions(+), 20 deletions(-)
Title: Extended Inference for Lasso and Elastic-Net Regularized Cox and
Generalized Linear Models
Description: The c060 package provides additional functions to perform stability selection, model validation and parameter tuning for glmnet models.
Author: Martin Sill, Thomas Hielscher, Manuela Zucknick, Natalia Becker.
Maintainer: Frederic Bertrand <frederic.bertrand@utt.fr>
Diff between c060 versions 0.2-7 dated 2021-03-16 and 0.2-8 dated 2021-10-06
DESCRIPTION | 8 ++++---- MD5 | 39 ++++++++++++++++++++------------------- NEWS.md | 4 ++++ build |only inst/CITATION | 6 +++--- man/EPSGO.Rd | 2 +- man/PLL.coxnet.Rd | 4 ++-- man/Plot.coef.glmnet.Rd | 4 ++-- man/Plot.peperr.curves.Rd | 2 +- man/balancedFolds.Rd | 2 +- man/coef.intsearch.Rd | 4 ++-- man/complexity.glmnet.Rd | 2 +- man/fit.glmnet.Rd | 4 ++-- man/plot.stabpath.Rd | 4 ++-- man/plot.summary.int.Rd | 2 +- man/predictProb.coxnet.Rd | 4 ++-- man/predictProb.glmnet.Rd | 4 ++-- man/stabpath.Rd | 2 +- man/stabsel.Rd | 2 +- man/summary.intsearch.Rd | 2 +- man/tune.glmnet.interval.Rd | 2 +- 21 files changed, 54 insertions(+), 49 deletions(-)
Title: Search and Download Data from the Swiss Federal Statistical
Office (BFS)
Description: Search and download data from the Swiss Federal Statistical Office <https://www.bfs.admin.ch/>.
Author: Felix Luginbuhl [aut, cre]
Maintainer: Felix Luginbuhl <felix.luginbuhl@protonmail.ch>
Diff between BFS versions 0.3.1 dated 2021-05-10 and 0.4.0 dated 2021-10-06
BFS-0.3.1/BFS/R/main.R |only BFS-0.3.1/BFS/R/utils.R |only BFS-0.3.1/BFS/man/bfs_open_dir.Rd |only BFS-0.3.1/BFS/man/bfs_search.Rd |only BFS-0.3.1/BFS/man/get_bfs_metadata.Rd |only BFS-0.3.1/BFS/man/get_bfs_metadata_all.Rd |only BFS-0.4.0/BFS/DESCRIPTION | 12 - BFS-0.4.0/BFS/LICENSE |only BFS-0.4.0/BFS/MD5 | 41 ++-- BFS-0.4.0/BFS/NAMESPACE | 22 -- BFS-0.4.0/BFS/NEWS.md | 11 - BFS-0.4.0/BFS/R/bfs_get_catalog.R | 58 +---- BFS-0.4.0/BFS/R/bfs_get_catalog_data.R |only BFS-0.4.0/BFS/R/bfs_get_catalog_tables.R |only BFS-0.4.0/BFS/R/bfs_get_data.R |only BFS-0.4.0/BFS/R/bfs_get_data_comments.R |only BFS-0.4.0/BFS/R/bfs_get_dataset.R |only BFS-0.4.0/BFS/R/bfs_get_metadata.R |only BFS-0.4.0/BFS/R/globals.R |only BFS-0.4.0/BFS/README.md | 284 +++++++++++++++------------- BFS-0.4.0/BFS/man/bfs_get_catalog.Rd | 15 - BFS-0.4.0/BFS/man/bfs_get_catalog_data.Rd |only BFS-0.4.0/BFS/man/bfs_get_catalog_tables.Rd |only BFS-0.4.0/BFS/man/bfs_get_data.Rd |only BFS-0.4.0/BFS/man/bfs_get_data_comments.Rd |only BFS-0.4.0/BFS/man/bfs_get_dataset.Rd | 82 +++----- BFS-0.4.0/BFS/man/bfs_get_metadata.Rd | 69 ++---- BFS-0.4.0/BFS/man/figures/logo.png |binary BFS-0.4.0/BFS/man/figures/logo_icon.svg | 28 +- BFS-0.4.0/BFS/man/figures/screenshot.png |only BFS-0.4.0/BFS/man/pipe.Rd | 24 +- 31 files changed, 313 insertions(+), 333 deletions(-)
Title: Response-Surface Analysis
Description: Provides functions to generate response-surface designs,
fit first- and second-order response-surface models,
make surface plots, obtain the path of steepest ascent,
and do canonical analysis. A good reference on these methods
is Chapter 10 of Wu, C-F J and Hamada, M (2009)
"Experiments: Planning, Analysis, and Parameter Design Optimization"
ISBN 978-0-471-69946-0. An early version of the package is
documented in Journal of Statistical Software <doi:10.18637/jss.v032.i07>.
Author: Russell Lenth [aut, cre]
Maintainer: Russell Lenth <russell-lenth@uiowa.edu>
Diff between rsm versions 2.10.2 dated 2020-09-04 and 2.10.3 dated 2021-10-06
DESCRIPTION | 12 ++++++------ MD5 | 35 ++++++++++++++++++----------------- build/partial.rdb |only build/vignette.rds |binary inst/CITATION | 4 ++-- inst/NEWS | 4 ++++ inst/doc/rs-illus.pdf |binary inst/doc/rsm-plots.pdf |binary inst/doc/rsm.pdf |binary man/FO.Rd | 2 +- man/bbd.Rd | 2 +- man/ccd.Rd | 2 +- man/ccd.pick.Rd | 2 +- man/coded.data.Rd | 2 +- man/contour.lm.Rd | 2 +- man/model.data.Rd | 2 +- man/rsm-package.Rd | 2 +- man/rsm.Rd | 2 +- man/steepest.Rd | 2 +- 19 files changed, 40 insertions(+), 35 deletions(-)
Title: Single Cell Analysis and Differential Expression
Description: Analyzing and interactively exploring large-scale single-cell RNA-seq datasets. 'pagoda2' primarily performs normalization and differential gene expression analysis, with an interactive application for exploring single-cell RNA-seq datasets. It performs basic tasks such as cell size normalization, gene variance normalization, and can be used to identify subpopulations and run differential expression within individual samples. 'pagoda2' was written to rapidly process modern large-scale scRNAseq datasets of approximately 1e6 cells. The companion web application allows users to explore which gene expression patterns form the different subpopulations within your data. The package also serves as the primary method for preprocessing data for conos, <https://github.com/kharchenkolab/conos>. This package interacts with data available through the 'p2data' package, which is available in a 'drat' repository. To access this data package, see the instructions at <https://github.com/kharchenkolab/pagoda2>. The size of the 'p2data' package is approximately 6 MB.
Author: Nikolas Barkas [aut],
Viktor Petukhov [aut],
Peter Kharchenko [aut],
Simon Steiger [ctb],
Evan Biederstedt [cre, aut]
Maintainer: Evan Biederstedt <evan.biederstedt@gmail.com>
Diff between pagoda2 versions 1.0.5 dated 2021-08-11 and 1.0.6 dated 2021-10-06
DESCRIPTION | 6 +++--- MD5 | 6 +++--- R/helpers.R | 3 ++- README.md | 10 +++++----- 4 files changed, 13 insertions(+), 12 deletions(-)
Title: Converting Odds Ratio to Relative Risk in Cohort Studies with
Partial Data Information
Description: Convert odds ratio to relative risk in cohort studies with partial data information (Wang (2013) <doi:10.18637/jss.v055.i05>).
Author: Zhu Wang <https://orcid.org/0000-0002-0773-0052>
Maintainer: Zhu Wang <wangz1@uthscsa.edu>
Diff between orsk versions 1.0-5 dated 2019-01-12 and 1.0-6 dated 2021-10-06
DESCRIPTION | 10 +++++----- MD5 | 11 ++++++----- build/partial.rdb |only build/vignette.rds |binary inst/CITATION | 5 ++--- inst/doc/orsk_demo.pdf |binary man/orsk.Rd | 2 +- 7 files changed, 14 insertions(+), 14 deletions(-)
Title: Radiocarbon Calibration Curves
Description: The IntCal20 radiocarbon calibration curves (Reimer et al. 2020 <doi:10.1017/RDC.2020.68>) are provided here in a single data package, together with previous IntCal curves (IntCal13, IntCal09, IntCal04, IntCal98) and postbomb curves. Also provided are functions to copy the curves into memory, and to plot the curves and their underlying data, as well as functions to calibrate radiocarbon dates.
Author: Maarten Blaauw [aut, cre] (<https://orcid.org/0000-0002-5680-1515>)
Maintainer: Maarten Blaauw <maarten.blaauw@qub.ac.uk>
Diff between IntCal versions 0.2.2 dated 2021-07-28 and 0.2.3 dated 2021-10-06
DESCRIPTION | 11 - MD5 | 38 +++--- NEWS.md | 5 R/IntCal.R | 4 R/plots.R | 69 +++++++----- README | 9 + build/partial.rdb |binary build/vignette.rds |binary inst/doc/calculations.R | 7 - inst/doc/calculations.Rmd | 13 +- inst/doc/calculations.html | 252 ++++----------------------------------------- inst/doc/intro.Rmd | 2 inst/doc/intro.html | 239 ++---------------------------------------- inst/doc/plots.R | 1 inst/doc/plots.Rmd | 3 inst/doc/plots.html | 233 ++--------------------------------------- man/draw.dates.Rd | 13 +- vignettes/calculations.Rmd | 13 +- vignettes/intro.Rmd | 2 vignettes/plots.Rmd | 3 20 files changed, 166 insertions(+), 751 deletions(-)
Title: Visualizing Hypothesis Tests in Multivariate Linear Models
Description: Provides HE plot and other functions for visualizing hypothesis
tests in multivariate linear models. HE plots represent sums-of-squares-and-products
matrices for linear hypotheses and for error using ellipses (in two
dimensions) and ellipsoids (in three dimensions). The related 'candisc' package
provides visualizations in a reduced-rank canonical discriminant space when
there are more than a few response variables.
Author: John Fox [aut],
Michael Friendly [aut, cre],
Georges Monette [ctb],
Phil Chalmers [ctb]
Maintainer: Michael Friendly <friendly@yorku.ca>
Diff between heplots versions 1.3-8 dated 2021-01-21 and 1.3-9 dated 2021-10-06
DESCRIPTION | 12 +- MD5 | 164 ++++++++++++++++---------------- NEWS | 4 build/partial.rdb |binary build/vignette.rds |binary data/AddHealth.RData |binary data/Adopted.RData |binary data/Bees.rda |binary data/Diabetes.RData |binary data/FootHead.rda |binary data/Headache.RData |binary data/Hernior.RData |binary data/MockJury.RData |binary data/NLSY.RData |binary data/NeuroCog.RData |binary data/Oslo.RData |binary data/Parenting.RData |binary data/Plastic.rda |binary data/Pottery2.RData |binary data/Probe1.RData |binary data/Probe2.RData |binary data/RatWeight.RData |binary data/ReactTime.RData |binary data/Rohwer.rda |binary data/RootStock.rda |binary data/Sake.RData |binary data/Skulls.RData |binary data/SocGrades.RData |binary data/SocialCog.RData |binary data/VocabGrowth.rda |binary data/WeightLoss.RData |binary data/schooldata.RData |binary inst/CITATION | 4 inst/doc/HE-examples.pdf |binary inst/doc/repeated.pdf |binary man/Adopted.Rd | 4 man/RatWeight.Rd | 4 man/ReactTime.Rd | 4 man/VocabGrowth.Rd | 4 man/WeightLoss.Rd | 4 man/heplot-package.Rd | 13 +- man/heplot.Rd | 7 - vignettes/fig/plot-Ortho-fm1.pdf |binary vignettes/fig/plot-Ortho-fm3.pdf |binary vignettes/fig/plot-grades-can-class.pdf |binary vignettes/fig/plot-grades-can-gpa.pdf |binary vignettes/fig/plot-grades-can-sex.pdf |binary vignettes/fig/plot-grades-pairs.pdf |binary vignettes/fig/plot-hern-can-age.pdf |binary vignettes/fig/plot-hern-can-build.pdf |binary vignettes/fig/plot-hern-can-cardiac.pdf |binary vignettes/fig/plot-hern-can-pstat.pdf |binary vignettes/fig/plot-hern-pairs.pdf |binary vignettes/fig/plot-jury-can1.pdf |binary vignettes/fig/plot-jury-mod1-HE.pdf |binary vignettes/fig/plot-jury-mod1-pairs.pdf |binary vignettes/fig/plot-jury-mod2-HE.pdf |binary vignettes/fig/plot-jury-mod3-eff.pdf |binary vignettes/fig/plot-obk-HE1.pdf |binary vignettes/fig/plot-obk-HE2.pdf |binary vignettes/fig/plot-obk-HE3.pdf |binary vignettes/fig/plot-obk2-HE1.pdf |binary vignettes/fig/plot-obk2-HE2.pdf |binary vignettes/fig/plot-ortho-HE.pdf |binary vignettes/fig/plot-ortho-nonlin-HE.pdf |binary vignettes/fig/plot-ortho-xyplot1.pdf |binary vignettes/fig/plot-ortho-xyplot2.pdf |binary vignettes/fig/plot-plastic2.pdf |binary vignettes/fig/plot-rohwer-HE1.pdf |binary vignettes/fig/plot-rohwer-HE2.pdf |binary vignettes/fig/plot-rohwer-HE3.pdf |binary vignettes/fig/plot-rohwer-HE4.pdf |binary vignettes/fig/plot-skulls-HE-pairs.pdf |binary vignettes/fig/plot-skulls-bwplot.pdf |binary vignettes/fig/plot-skulls-can2.pdf |binary vignettes/fig/plot-skulls4.pdf |binary vignettes/fig/plot-voc1.pdf |binary vignettes/fig/plot-voc4.pdf |binary vignettes/fig/plot-voc8.pdf |binary vignettes/fig/plot-wl-HE1.pdf |binary vignettes/fig/plot-wl-HE2.pdf |binary vignettes/fig/plot-wl-HE3.pdf |binary vignettes/fig/plot-wl-means.pdf |binary 83 files changed, 122 insertions(+), 102 deletions(-)
Title: Principal Tensor Analysis on k Modes
Description: A multiway method to decompose a tensor (array) of any order, as a generalisation of SVD also supporting non-identity metrics and penalisations. 2-way SVD with these extensions is also available. The package includes also some other multiway methods: PCAn (Tucker-n) and PARAFAC/CANDECOMP with these extensions.
Author: Didier G. Leibovici (2010) <doi:10.18637/jss.v034.i10>
Maintainer: Didier G. Leibovici <GeotRYcs@gmail.com>
Diff between PTAk versions 1.3-34 dated 2019-02-06 and 1.4-0 dated 2021-10-06
DESCRIPTION | 14 ++--- MD5 | 39 +++++++-------- R/PTAk.R | 36 +++++++++++--- build |only data/Zone_climTUN.RData |binary data/crimerate.RData |binary data/timage12.RData |binary demo/00Index | 6 -- inst/CITATION | 121 +++++++++++++++++++++++------------------------- inst/doc/index.html | 6 +- man/CANDPARA.Rd | 3 - man/COS2CTR.PTAk.Rd | 10 ++- man/FCA2.Rd | 4 + man/FCAk.Rd | 7 +- man/PCAn.Rd | 3 - man/PTA3.Rd | 2 man/PTAk.Rd | 8 +-- man/SINGVA.Rd | 3 - man/howtoPTAk.Rd | 56 +++++++++++----------- man/plot.PTAk.Rd | 8 +-- man/summary.PTAk.Rd | 2 21 files changed, 177 insertions(+), 151 deletions(-)
Title: Wildlife Sightability Modeling
Description: Uses logistic regression to model the probability of detection as a function of covariates.
This model is then used with observational survey data to estimate population size, while
accounting for uncertain detection. See Steinhorst and Samuel (1989).
Author: Fieberg John [aut],
Schwarz Carl James [aut, cre]
Maintainer: Schwarz Carl James <cschwarz.stat.sfu.ca@gmail.com>
Diff between SightabilityModel versions 1.4.1 dated 2020-09-08 and 1.4.2 dated 2021-10-06
SightabilityModel-1.4.1/SightabilityModel/inst/NEWS.Rd |only SightabilityModel-1.4.2/SightabilityModel/DESCRIPTION | 10 SightabilityModel-1.4.2/SightabilityModel/MD5 | 36 SightabilityModel-1.4.2/SightabilityModel/NEWS.md |only SightabilityModel-1.4.2/SightabilityModel/R/Sight.Est.R | 2 SightabilityModel-1.4.2/SightabilityModel/R/Sight.Est.Ratio.R | 2 SightabilityModel-1.4.2/SightabilityModel/R/data.R | 6 SightabilityModel-1.4.2/SightabilityModel/README.md | 2 SightabilityModel-1.4.2/SightabilityModel/build/vignette.rds |binary SightabilityModel-1.4.2/SightabilityModel/inst/CITATION | 4 SightabilityModel-1.4.2/SightabilityModel/inst/doc/MoosePopR-SightabilityPopR-Demo.Rmd | 9 SightabilityModel-1.4.2/SightabilityModel/inst/doc/MoosePopR-SightabilityPopR-Demo.html | 1314 +++------- SightabilityModel-1.4.2/SightabilityModel/inst/doc/RatioEstimator.pdf |binary SightabilityModel-1.4.2/SightabilityModel/inst/doc/SightabilityModel.pdf |binary SightabilityModel-1.4.2/SightabilityModel/man/Sight.Est.Ratio.Rd | 2 SightabilityModel-1.4.2/SightabilityModel/man/Sight.Est.Rd | 2 SightabilityModel-1.4.2/SightabilityModel/man/SightabilityModel-package.Rd | 2 SightabilityModel-1.4.2/SightabilityModel/man/obs.m.Rd | 4 SightabilityModel-1.4.2/SightabilityModel/vignettes/MoosePopR-SightabilityPopR-Demo.Rmd | 9 SightabilityModel-1.4.2/SightabilityModel/vignettes/vignette.bib | 2 20 files changed, 526 insertions(+), 880 deletions(-)
More information about SightabilityModel at CRAN
Permanent link
Title: Tools for Identifying Important Nodes in Networks
Description: Includes assorted tools for network analysis. Bridge centrality; goldbricker; MDS, PCA, & eigenmodel network plotting.
Author: Payton Jones [aut, cre]
Maintainer: Payton Jones <paytonjjones@gmail.com>
Diff between networktools versions 1.3.0 dated 2021-09-12 and 1.4.0 dated 2021-10-06
DESCRIPTION | 11 ++++++----- MD5 | 14 ++++++++------ NEWS.md | 6 ++++++ R/bridge.R | 20 +++++++++++++++++--- R/goldbricker.R | 5 ++++- R/net_reduce.R | 10 ++++++++-- man/bridge.Rd | 8 +++++++- tests |only 8 files changed, 56 insertions(+), 18 deletions(-)
Title: Length-Based Spawning Potential Ratio
Description: Simulate expected equilibrium length composition, yield-per-recruit, and
the spawning potential ratio (SPR) using the length-based SPR (LBSPR) model. Fit the LBSPR
model to length data to estimate selectivity, relative apical fishing mortality, and
the spawning potential ratio for data-limited fisheries.
See Hordyk et al (2016) <doi:10.1139/cjfas-2015-0422> for more information about the
LBSPR assessment method.
Author: Adrian Hordyk [aut, cre]
Maintainer: Adrian Hordyk <ar.hordyk@gmail.com>
Diff between LBSPR versions 0.1.5 dated 2019-12-05 and 0.1.6 dated 2021-10-06
DESCRIPTION | 9 MD5 | 66 - R/Shiny.r | 2 R/plotSize.r | 5 R/plotTarg.r | 4 build/vignette.rds |binary inst/doc/LBSPR.R | 80 - inst/doc/LBSPR.Rmd | 4 inst/doc/LBSPR.html | 1476 ++-------------------------- inst/shiny_apps/LBSPR/LFreq_MultiYr.csv |only inst/shiny_apps/LBSPR/LFreq_MultiYrHead.csv |only inst/shiny_apps/LBSPR/LFreq_SingYr.csv |only inst/shiny_apps/LBSPR/LFreq_SingYrHead.csv |only inst/shiny_apps/LBSPR/LRaw_MultiYr.csv |only inst/shiny_apps/LBSPR/LRaw_MultiYrHead.csv |only inst/shiny_apps/LBSPR/LRaw_SingYr.csv |only inst/shiny_apps/LBSPR/LRaw_SingYrHead.csv |only inst/shiny_apps/LBSPR/server.r | 5 inst/shiny_apps/LBSPR/ui.r | 48 man/LBSPR_NLLabsel.Rd | 19 man/LBSPR_NLLgtg.Rd | 15 man/LBSPRfit.Rd | 12 man/LBSPRfit_.Rd | 11 man/LBSPRopt.Rd | 10 man/LBSPRsim_.Rd | 3 man/Shiny.Rd | 2 man/initialize-LB_lengths-method.Rd | 13 man/initialize-LB_obj-method.Rd | 4 man/initialize-LB_pars-method.Rd | 4 man/plotCurves.Rd | 13 man/plotEsts.Rd | 15 man/plotMat.Rd | 10 man/plotSPRCirc.Rd | 19 man/plotSim.Rd | 23 man/plotSize.Rd | 12 man/plotTarg.Rd | 14 src/RcppExports.cpp | 5 vignettes/LBSPR.Rmd | 4 38 files changed, 382 insertions(+), 1525 deletions(-)
Title: Estimation of Indicators on Social Exclusion and Poverty
Description: Estimation of indicators on social exclusion and poverty, as well
as Pareto tail modeling for empirical income distributions.
Author: Andreas Alfons [aut, cre],
Josef Holzer [aut],
Matthias Templ [aut],
Alexander Haider [ctb]
Maintainer: Andreas Alfons <alfons@ese.eur.nl>
Diff between laeken versions 0.5.1 dated 2020-02-05 and 0.5.2 dated 2021-10-06
DESCRIPTION | 10 MD5 | 146 ++--- NEWS | 7 R/arpr.R | 18 R/arpt.R | 24 R/bootVar.R | 3 R/calibWeights.R | 7 R/gini.R | 3 R/gpg.R | 3 R/paretoQPlot.R | 3 R/paretoScale.R | 3 R/paretoTail.R | 12 R/plot.R | 3 R/prop.R | 3 R/qsr.R | 3 R/rmpg.R | 3 R/thetaISE.R | 55 -- R/thetaPDC.R | 59 +- R/utils.R | 3 R/variance.R | 57 +- build/partial.rdb |binary build/vignette.rds |binary data/eusilc.RData |binary data/ses.RData |binary inst/CITATION | 40 - inst/doc/laeken-intro.R | 69 +- inst/doc/laeken-intro.Rnw | 1147 ++++++++++++++++++++---------------------- inst/doc/laeken-intro.pdf |binary inst/doc/laeken-pareto.R | 49 - inst/doc/laeken-pareto.Rnw | 647 +++++++++++------------ inst/doc/laeken-pareto.pdf |binary inst/doc/laeken-standard.R | 63 +- inst/doc/laeken-standard.Rnw | 648 +++++++++++------------ inst/doc/laeken-standard.pdf |binary inst/doc/laeken-variance.R | 23 inst/doc/laeken-variance.Rnw | 338 ++++++------ inst/doc/laeken-variance.pdf |binary man/arpr.Rd | 24 man/arpt.Rd | 13 man/bootVar.Rd | 29 - man/calibWeights.Rd | 21 man/eqInc.Rd | 3 man/eusilc.Rd | 74 +- man/fitPareto.Rd | 11 man/gini.Rd | 20 man/gpg.Rd | 23 man/incMean.Rd | 3 man/incMedian.Rd | 10 man/incQuintile.Rd | 11 man/laeken-package.Rd | 6 man/meanExcessPlot.Rd | 14 man/minAMSE.Rd | 11 man/paretoQPlot.Rd | 20 man/paretoScale.Rd | 14 man/paretoTail.Rd | 15 man/plot.paretoTail.Rd | 13 man/prop.Rd | 20 man/qsr.Rd | 20 man/replaceTail.Rd | 3 man/reweightOut.Rd | 3 man/rmpg.Rd | 20 man/ses.Rd | 130 ++-- man/shrinkOut.Rd | 3 man/thetaISE.Rd | 15 man/thetaPDC.Rd | 15 man/thetaWML.Rd | 11 man/utils.Rd | 3 man/variance.Rd | 41 - man/weightedQuantile.Rd | 9 vignettes/laeken-intro.Rnw | 1147 ++++++++++++++++++++---------------------- vignettes/laeken-pareto.Rnw | 647 +++++++++++------------ vignettes/laeken-standard.Rnw | 648 +++++++++++------------ vignettes/laeken-variance.Rnw | 338 ++++++------ vignettes/laeken.bib | 49 - 74 files changed, 3525 insertions(+), 3381 deletions(-)
Title: Vector Fields from Spatial Time Series of Population Abundance
Description: Functions for converting time series of spatial abundance or density
data in raster format to vector fields of population movement using the digital
image correlation technique. More specifically, the functions in the package
compute cross-covariance using discrete fast Fourier transforms for computational
efficiency. Vectors in vector fields point in the direction of highest two
dimensional cross-covariance. The package has a novel implementation of the
digital image correlation algorithm that is designed to detect persistent
directional movement when image time series extend beyond a sequence of
two raster images.
Author: Devin Goodsman [aut, cre] (<https://orcid.org/0000-0003-1935-5779>)
Maintainer: Devin Goodsman <goodsman@ualberta.ca>
Diff between ICvectorfields versions 0.1.0 dated 2021-09-27 and 0.1.1 dated 2021-10-06
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS.md | 3 +++ src/MoransI.cpp | 18 +++++++++++++++--- 4 files changed, 24 insertions(+), 9 deletions(-)
More information about ICvectorfields at CRAN
Permanent link
Title: Fit Univariate Distributions
Description: Wrapper for computing parameters for univariate distributions using MLE. It creates an object that stores d, p, q, r functions as well as parameters and statistics for diagnostics. Currently supports automated fitting from base and actuar packages. A manually fitting distribution fitting function is included to support directly specifying parameters for any distribution from ancillary packages.
Author: Thomas Roh [aut, cre]
Maintainer: Thomas Roh <thomas@roh.engineering>
Diff between fitur versions 0.6.1 dated 2018-09-01 and 0.6.2 dated 2021-10-06
DESCRIPTION | 9 MD5 | 32 +- NAMESPACE | 5 NEWS.md | 4 R/diagnostics.R | 8 R/discrete_uniform.R | 4 R/distfun.R | 12 R/gadgets.R | 2 README.md | 8 build/vignette.rds |binary inst/doc/diagnostic_plots.R | 12 inst/doc/diagnostic_plots.html | 370 +++++++++---------------- inst/doc/introduction.R | 10 inst/doc/introduction.html | 481 ++++++++++++--------------------- inst/doc/univariate_distributions.R | 2 inst/doc/univariate_distributions.html | 215 +------------- man/DiscreteUniform.Rd | 2 17 files changed, 398 insertions(+), 778 deletions(-)
Title: A Tool for Processing and Analyzing Dendrometer Data
Description: There are various functions for managing and cleaning data before the application of different approaches. This includes identifying and erasing sudden jumps in dendrometer data not related to environmental change, identifying the time gaps of recordings, and changing the temporal resolution of data to different frequencies. Furthermore, the package calculates daily statistics of dendrometer data, including the daily amplitude of tree growth. Various approaches can be applied to separate radial growth from daily cyclic shrinkage and expansion due to uptake and loss of stem water. In addition, it identifies periods of consecutive days with user-defined climatic conditions in daily meteorological data, then check what trees are doing during that period.
Author: Sugam Aryal [aut, cre, dtc],
Martin Häusser [aut],
Jussi Grießinger [aut],
Ze-Xin Fan [aut],
Achim Bräuning [aut, dgs]
Maintainer: Sugam Aryal <sugam.aryal@fau.de>
Diff between dendRoAnalyst versions 0.1.2 dated 2021-10-05 and 0.1.3 dated 2021-10-06
DESCRIPTION | 6 +-- MD5 | 12 +++---- R/dendro.resample.R | 60 +++++++++++++++++++++++++++++++++-- R/phase.zg.R | 82 +++++++++++++++++++++++-------------------------- build/partial.rdb |binary man/dendro.resample.Rd | 4 +- man/phase.zg.Rd | 2 - 7 files changed, 107 insertions(+), 59 deletions(-)
Title: Simulation of Simple and Complex Survival Data
Description: Simulation of simple and complex survival data including recurrent and multiple events and competing risks. See Moriña D, Navarro A. (2014) <doi:10.18637/jss.v059.i02>.
Author: David Moriña Soler [aut, cre] (<https://orcid.org/0000-0001-5949-7443>),
Albert Navarro [aut]
Maintainer: David Moriña Soler <dmorina@ub.edu>
Diff between survsim versions 1.1.6 dated 2021-05-14 and 1.1.7 dated 2021-10-06
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- inst/CITATION | 4 ++-- man/survsim-package.Rd | 4 ++-- 4 files changed, 11 insertions(+), 11 deletions(-)
Title: Interactive Sketches
Description: Creates static / animated / interactive visualisations embeddable
in R Markdown documents. It implements an R-to-JavaScript transpiler and
enables users to write JavaScript applications using the syntax of R.
Author: Chun Fung Kwok [aut, cre] (<https://orcid.org/0000-0002-0716-3879>),
Kate Saunders [ctb]
Maintainer: Chun Fung Kwok <jkwok@svi.edu.au>
Diff between sketch versions 1.0.3 dated 2020-10-08 and 1.1.17 dated 2021-10-06
sketch-1.0.3/sketch/R/extra-order.R |only sketch-1.0.3/sketch/R/utils-shortcuts.R |only sketch-1.0.3/sketch/build |only sketch-1.0.3/sketch/inst/LICENSE.note |only sketch-1.0.3/sketch/inst/doc |only sketch-1.0.3/sketch/inst/js |only sketch-1.0.3/sketch/inst/sketch_editor/www/index.html |only sketch-1.0.3/sketch/man/deparse_df_arg.Rd |only sketch-1.0.3/sketch/man/deparse_list_arg.Rd |only sketch-1.0.3/sketch/man/empty-headers.Rd |only sketch-1.0.3/sketch/man/print.rule.Rd |only sketch-1.0.3/sketch/vignettes |only sketch-1.1.17/sketch/DESCRIPTION | 16 sketch-1.1.17/sketch/MD5 | 248 +-- sketch-1.1.17/sketch/NAMESPACE | 21 sketch-1.1.17/sketch/R/assets-loader.R | 2 sketch-1.1.17/sketch/R/assets-to_json.R | 10 sketch-1.1.17/sketch/R/assets-to_shiny_tag.R | 70 sketch-1.1.17/sketch/R/core-components.R | 800 +++++++++- sketch-1.1.17/sketch/R/core-deparse.R | 141 + sketch-1.1.17/sketch/R/core-rewrite.R | 95 + sketch-1.1.17/sketch/R/core-rules.R | 58 sketch-1.1.17/sketch/R/extra-bundle.R |only sketch-1.1.17/sketch/R/extra-check.R | 99 + sketch-1.1.17/sketch/R/extra-config.R |only sketch-1.1.17/sketch/R/extra-rmarkdown.R | 28 sketch-1.1.17/sketch/R/extra-shiny.R | 4 sketch-1.1.17/sketch/R/extra-test.R |only sketch-1.1.17/sketch/R/extra-websocket.R |only sketch-1.1.17/sketch/R/interface-compile.R | 51 sketch-1.1.17/sketch/R/interface-source_file.R | 61 sketch-1.1.17/sketch/R/sketch.R | 5 sketch-1.1.17/sketch/R/utils-helpers.R | 95 + sketch-1.1.17/sketch/R/utils-predicates.R | 1 sketch-1.1.17/sketch/R/utils_optional_args.R | 12 sketch-1.1.17/sketch/inst/assets/browser-R_core.js | 2 sketch-1.1.17/sketch/inst/modules/dom.R | 72 sketch-1.1.17/sketch/inst/modules/dom.js |only sketch-1.1.17/sketch/inst/modules/io.R |only sketch-1.1.17/sketch/inst/modules/io.js |only sketch-1.1.17/sketch/inst/modules/purrr.R |only sketch-1.1.17/sketch/inst/modules/purrr.js |only sketch-1.1.17/sketch/inst/modules/testthat.R |only sketch-1.1.17/sketch/inst/modules/testthat.js |only sketch-1.1.17/sketch/inst/modules/websocket.R |only sketch-1.1.17/sketch/inst/modules/websocket.js |only sketch-1.1.17/sketch/inst/plumber |only sketch-1.1.17/sketch/inst/rstudio/addins.dcf | 5 sketch-1.1.17/sketch/inst/sketch_IDE |only sketch-1.1.17/sketch/inst/sketch_editor/server.R | 10 sketch-1.1.17/sketch/inst/sketch_editor/ui.R | 8 sketch-1.1.17/sketch/inst/test_files/test_R6.R |only sketch-1.1.17/sketch/inst/test_files/test_R6.js |only sketch-1.1.17/sketch/inst/test_files/test_R6_2.R |only sketch-1.1.17/sketch/inst/test_files/test_R6_2.js |only sketch-1.1.17/sketch/inst/test_files/test_R6_3.R |only sketch-1.1.17/sketch/inst/test_files/test_R6_3.js |only sketch-1.1.17/sketch/inst/test_files/test_config.R |only sketch-1.1.17/sketch/inst/test_files/test_config_2.R |only sketch-1.1.17/sketch/inst/test_files/test_dir |only sketch-1.1.17/sketch/inst/test_files/test_dir.R |only sketch-1.1.17/sketch/inst/test_files/test_raw_string.R |only sketch-1.1.17/sketch/inst/test_files/test_testthat_app.R |only sketch-1.1.17/sketch/inst/test_files/test_testthat_app_2.R |only sketch-1.1.17/sketch/inst/test_files/test_testthat_test.R |only sketch-1.1.17/sketch/inst/test_files/test_testthat_test_2.R |only sketch-1.1.17/sketch/inst/test_files/test_testthat_test_3.R |only sketch-1.1.17/sketch/inst/test_files/test_testthat_test_3_dependency.R |only sketch-1.1.17/sketch/inst/test_files/test_testthat_test_3_dependency_2.R |only sketch-1.1.17/sketch/inst/test_files/test_websocket.R |only sketch-1.1.17/sketch/man/bundle.Rd |only sketch-1.1.17/sketch/man/combine_rules.Rd |only sketch-1.1.17/sketch/man/compile_active.Rd |only sketch-1.1.17/sketch/man/compile_exprs.Rd | 4 sketch-1.1.17/sketch/man/compile_r.Rd | 4 sketch-1.1.17/sketch/man/default_2_deparsers.Rd |only sketch-1.1.17/sketch/man/default_processors.Rd | 4 sketch-1.1.17/sketch/man/deparse_js.Rd | 5 sketch-1.1.17/sketch/man/deparsers_component.Rd | 141 + sketch-1.1.17/sketch/man/dp.Rd |only sketch-1.1.17/sketch/man/empty-functions.Rd | 6 sketch-1.1.17/sketch/man/eng_sketch.Rd | 2 sketch-1.1.17/sketch/man/figures/lifecycle-archived.svg |only sketch-1.1.17/sketch/man/figures/lifecycle-defunct.svg |only sketch-1.1.17/sketch/man/figures/lifecycle-deprecated.svg |only sketch-1.1.17/sketch/man/figures/lifecycle-experimental.svg |only sketch-1.1.17/sketch/man/figures/lifecycle-maturing.svg |only sketch-1.1.17/sketch/man/figures/lifecycle-questioning.svg |only sketch-1.1.17/sketch/man/figures/lifecycle-soft-deprecated.svg |only sketch-1.1.17/sketch/man/figures/lifecycle-stable.svg |only sketch-1.1.17/sketch/man/figures/lifecycle-superseded.svg |only sketch-1.1.17/sketch/man/flatten_filelist.Rd |only sketch-1.1.17/sketch/man/get_dependencies.Rd |only sketch-1.1.17/sketch/man/header-functions.Rd |only sketch-1.1.17/sketch/man/html_tags.Rd | 7 sketch-1.1.17/sketch/man/insert_sketch.Rd | 4 sketch-1.1.17/sketch/man/is_syntactic_literal.Rd |only sketch-1.1.17/sketch/man/license_info.Rd |only sketch-1.1.17/sketch/man/list-of-deparsers.Rd |only sketch-1.1.17/sketch/man/local.Rd |only sketch-1.1.17/sketch/man/predicate_component.Rd | 114 + sketch-1.1.17/sketch/man/print.sketch_rule.Rd |only sketch-1.1.17/sketch/man/read_multilines.Rd |only sketch-1.1.17/sketch/man/safeguard.Rd |only sketch-1.1.17/sketch/man/source_js.Rd | 9 sketch-1.1.17/sketch/man/source_r.Rd | 10 sketch-1.1.17/sketch/man/split_rules.Rd |only sketch-1.1.17/sketch/man/test_sketch.Rd |only sketch-1.1.17/sketch/man/websocket.Rd |only sketch-1.1.17/sketch/tests/testthat/test_assets.R | 19 sketch-1.1.17/sketch/tests/testthat/test_bundle.R |only sketch-1.1.17/sketch/tests/testthat/test_check.R |only sketch-1.1.17/sketch/tests/testthat/test_combine_rules.R |only sketch-1.1.17/sketch/tests/testthat/test_compile.R | 445 +++++ sketch-1.1.17/sketch/tests/testthat/test_config.R |only sketch-1.1.17/sketch/tests/testthat/test_deparse_R6.R |only sketch-1.1.17/sketch/tests/testthat/test_helpers.R | 31 sketch-1.1.17/sketch/tests/testthat/test_rmarkdown.R | 42 sketch-1.1.17/sketch/tests/testthat/test_source.R | 6 sketch-1.1.17/sketch/tests/testthat/test_testthat.R |only sketch-1.1.17/sketch/tests/testthat/test_websocket.R |only 121 files changed, 2371 insertions(+), 396 deletions(-)
Title: R Interface to the 'PostgreSQL' Database System
Description: Database interface and 'PostgreSQL' driver for 'R'.
This package provides a Database Interface 'DBI' compliant
driver for 'R' to access 'PostgreSQL' database systems.
In order to build and install this package from source, 'PostgreSQL'
itself must be present your system to provide 'PostgreSQL' functionality
via its libraries and header files. These files are provided as
'postgresql-devel' package under some Linux distributions.
On 'macOS' and 'Microsoft Windows' system the attached 'libpq' library source will be used.
Author: Joe Conway, Dirk Eddelbuettel, Tomoaki Nishiyama, Sameer Kumar Prayaga (during 2008), Neil Tiffin
Maintainer: Tomoaki Nishiyama <tomoakin@staff.kanazawa-u.ac.jp>
Diff between RPostgreSQL versions 0.7 dated 2021-07-27 and 0.7-2 dated 2021-10-06
RPostgreSQL-0.7-2/RPostgreSQL/DESCRIPTION | 8 RPostgreSQL-0.7-2/RPostgreSQL/MD5 | 20 -- RPostgreSQL-0.7-2/RPostgreSQL/configure | 90 +++++++++- RPostgreSQL-0.7-2/RPostgreSQL/configure.ac | 31 ++- RPostgreSQL-0.7-2/RPostgreSQL/src/RS-DBI.c | 8 RPostgreSQL-0.7-2/RPostgreSQL/src/RS-PostgreSQL.c | 2 RPostgreSQL-0.7-2/RPostgreSQL/src/RS-pgsql-copy.c | 2 RPostgreSQL-0.7-2/RPostgreSQL/src/S4R.h | 5 RPostgreSQL-0.7/RPostgreSQL/tests/dbWriteTableFailTest.R |only RPostgreSQL-0.7/RPostgreSQL/tests/dbWriteTableFailTest.Rout.save |only RPostgreSQL-0.7/RPostgreSQL/tests/selectWhereZero.R |only RPostgreSQL-0.7/RPostgreSQL/tests/selectWhereZero.Rout.save |only RPostgreSQL-0.7/RPostgreSQL/tests/unknowntype.R |only RPostgreSQL-0.7/RPostgreSQL/tests/unknowntype.Rout.save |only 14 files changed, 128 insertions(+), 38 deletions(-)
Title: Tools for Analyzing QTL Experiments
Description: Analysis of experimental crosses to identify genes
(called quantitative trait loci, QTLs) contributing to variation in
quantitative traits.
Broman et al. (2003) <doi:10.1093/bioinformatics/btg112>.
Author: Karl W Broman <broman@wisc.edu> and Hao Wu, with
ideas from Gary Churchill and Saunak Sen and contributions from
Danny Arends, Robert Corty, Timothee Flutre, Ritsert Jansen, Pjotr
Prins, Lars Ronnegard, Rohan Shah, Laura Shannon, Quoc Tran, Aaron
Wolen, Brian Yandell, and R Core Team
Maintainer: Karl W Broman <broman@wisc.edu>
Diff between qtl versions 1.48-1 dated 2021-03-27 and 1.50 dated 2021-10-06
DESCRIPTION | 8 +++---- MD5 | 52 ++++++++++++++++++++++++------------------------- NEWS.md | 15 ++++++++++++++ R/cim.R | 22 ++++++++++++++------ R/util.R | 8 +++++-- build/vignette.rds |binary data/badorder.RData |binary data/bristle3.RData |binary data/bristleX.RData |binary data/fake.4way.RData |binary data/fake.bc.RData |binary data/fake.f2.RData |binary data/hyper.RData |binary data/listeria.RData |binary data/locations.RData |binary data/map10.RData |binary data/mapthis.RData |binary data/multitrait.RData |binary inst/INSTALL_ME.txt | 18 ++++++++-------- inst/doc/bcsft.pdf |binary inst/doc/rqtltour.pdf |binary inst/doc/rqtltour2.pdf |binary man/cim.Rd | 3 +- src/effectscan.c | 13 ++++++++---- src/lapackutil.c | 21 +++++++++---------- src/lapackutil.h | 6 ----- src/util.c | 12 ----------- 27 files changed, 97 insertions(+), 81 deletions(-)
Title: Measuring Multivariate Dependence Using Distance Multivariance
Description: Distance multivariance is a measure of dependence which can be used to detect
and quantify dependence of arbitrarily many random vectors. The necessary functions are
implemented in this packages and examples are given. It includes: distance multivariance,
distance multicorrelation, dependence structure detection, tests of independence and
copula versions of distance multivariance based on the Monte Carlo empirical transform.
Detailed references are given in the package description, as starting point for the
theoretic background we refer to:
B. Böttcher, Dependence and Dependence Structures: Estimation and Visualization Using
the Unifying Concept of Distance Multivariance. Open Statistics, Vol. 1, No. 1 (2020),
<doi:10.1515/stat-2020-0001>.
Author: Björn Böttcher [aut, cre],
Martin Keller-Ressel [ctb]
Maintainer: Björn Böttcher <bjoern.boettcher@tu-dresden.de>
Diff between multivariance versions 2.4.0 dated 2020-12-10 and 2.4.1 dated 2021-10-06
DESCRIPTION | 10 +++++----- MD5 | 17 +++++++++-------- R/multivariance-functions.R | 19 +++++++++++++------ build |only inst/NEWS | 14 ++++++++++++++ man/emp.transf.Rd | 4 +++- man/emp.transf.dep.Rd | 2 +- man/multivariance-package.Rd | 6 +++--- src/RcppExports.cpp | 5 +++++ src/multivariance.cpp | 2 ++ 10 files changed, 55 insertions(+), 24 deletions(-)
Title: Data Management of Large Hierarchical Data
Description: Import 'SPSS' data, handle and change 'SPSS' meta data, store and access large hierarchical data in 'SQLite' data bases.
Author: Benjamin Becker [aut, cre],
Karoline Sachse [ctb],
Johanna Busse [ctb]
Maintainer: Benjamin Becker <b.becker@iqb.hu-berlin.de>
Diff between eatGADS versions 0.17.0 dated 2021-07-19 and 0.18.1 dated 2021-10-06
DESCRIPTION | 10 - MD5 | 58 ++++--- NAMESPACE | 4 NEWS.md | 18 ++ R/applyChangeMeta.R | 15 +- R/changeMissings.R | 2 R/check4SPSS.R |only R/checkFormat.r |only R/equalGADS.R | 28 +++ R/getChangeMeta.R | 8 - R/write_spss2.R | 251 ++++++++++++---------------------- build/partial.rdb |binary inst/doc/createGADS.html | 4 inst/doc/getGADS.Rmd | 2 inst/doc/getGADS.html | 8 - inst/doc/import_raw.html | 4 inst/doc/import_spss.html | 4 inst/doc/meta_data.html | 16 +- inst/doc/recoding_forcedChoice.html | 4 inst/doc/recoding_multipleChoice.html | 4 man/check4SPSS.Rd |only man/checkFormat.Rd |only man/equalGADS.Rd | 4 man/write_spss2.Rd | 27 ++- tests/testthat/test_applyChangeMeta.R | 9 - tests/testthat/test_changeVarNames.R | 7 tests/testthat/test_check4SPSS.R |only tests/testthat/test_checkFormat.R |only tests/testthat/test_equalGADS.R | 32 ++++ tests/testthat/test_fac2dummies.R | 4 tests/testthat/test_getChangeMeta.R | 28 +++ tests/testthat/test_write_spss2.R | 116 +++++---------- vignettes/getGADS.Rmd | 2 33 files changed, 342 insertions(+), 327 deletions(-)
Title: Custom 'Bootstrap' 'Sass' Themes for 'shiny' and 'rmarkdown'
Description: Simplifies custom 'CSS' styling of both 'shiny' and 'rmarkdown' via 'Bootstrap' 'Sass'. Supports both 'Bootstrap' 3 and 4 as well as their various 'Bootswatch' themes. An interactive widget is also provided for previewing themes in real time.
Author: Carson Sievert [aut, cre] (<https://orcid.org/0000-0002-4958-2844>),
Joe Cheng [aut],
RStudio [cph],
Bootstrap contributors [ctb] (Bootstrap library),
Twitter, Inc [cph] (Bootstrap library),
Javi Aguilar [ctb, cph] (Bootstrap colorpicker library),
Thomas Park [ctb, cph] (Bootswatch library),
PayPal [ctb, cph] (Bootstrap accessibility plugin)
Maintainer: Carson Sievert <carson@rstudio.com>
Diff between bslib versions 0.3.0 dated 2021-09-02 and 0.3.1 dated 2021-10-06
bslib-0.3.0/bslib/inst/fonts/mem5YaGs126MiZpBA-UN7rg-Vg.woff |only bslib-0.3.0/bslib/inst/fonts/mem5YaGs126MiZpBA-UN7rgOUuhv.woff |only bslib-0.3.0/bslib/inst/fonts/mem5YaGs126MiZpBA-UN_r8-Vg.woff |only bslib-0.3.0/bslib/inst/fonts/mem5YaGs126MiZpBA-UN_r8OUuhv.woff |only bslib-0.3.0/bslib/inst/fonts/mem6YaGs126MiZpBA-UFUJ0d.woff |only bslib-0.3.0/bslib/inst/fonts/mem6YaGs126MiZpBA-UFUK0Zdcs.woff |only bslib-0.3.0/bslib/inst/fonts/mem8YaGs126MiZpBA-U1UQ.woff |only bslib-0.3.0/bslib/inst/fonts/mem8YaGs126MiZpBA-UFVZ0d.woff |only bslib-0.3.0/bslib/inst/fonts/memnYaGs126MiZpBA-UFUKWiUNhrIqU.woff |only bslib-0.3.0/bslib/inst/fonts/memnYaGs126MiZpBA-UFUKWiUOhv.woff |only bslib-0.3.0/bslib/inst/fonts/memnYaGs126MiZpBA-UFUKWyV-hv.woff |only bslib-0.3.0/bslib/inst/fonts/memnYaGs126MiZpBA-UFUKWyV9hrIqU.woff |only bslib-0.3.0/bslib/tests/testthat/_snaps/nav.md |only bslib-0.3.1/bslib/DESCRIPTION | 9 bslib-0.3.1/bslib/MD5 | 234 +++++----- bslib-0.3.1/bslib/NEWS.md | 10 bslib-0.3.1/bslib/R/bs-theme.R | 2 bslib-0.3.1/bslib/R/navs-legacy.R | 1 bslib-0.3.1/bslib/R/sysdata.rda |binary bslib-0.3.1/bslib/R/versions.R | 2 bslib-0.3.1/bslib/inst/css-precompiled/5/bootstrap.min.css | 2 bslib-0.3.1/bslib/inst/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk5hkWVAexg.woff |only bslib-0.3.1/bslib/inst/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk5hkaVQ.woff |only bslib-0.3.1/bslib/inst/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk8ZkWVAexg.woff |only bslib-0.3.1/bslib/inst/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0Rk8ZkaVQ.woff |only bslib-0.3.1/bslib/inst/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0RkyFjWVAexg.woff |only bslib-0.3.1/bslib/inst/fonts/memQYaGs126MiZpBA-UFUIcVXSCEkx2cmqvXlWq8tWZ0Pw86hd0RkyFjaVQ.woff |only bslib-0.3.1/bslib/inst/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsg-1x4gaVQ.woff |only bslib-0.3.1/bslib/inst/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsg-1y4k.woff |only bslib-0.3.1/bslib/inst/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsiH0B4gaVQ.woff |only bslib-0.3.1/bslib/inst/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsiH0C4k.woff |only bslib-0.3.1/bslib/inst/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsjZ0B4gaVQ.woff |only bslib-0.3.1/bslib/inst/fonts/memSYaGs126MiZpBA-UvWbX2vVnXBbObj2OVZyOOSr4dVJWUgsjZ0C4k.woff |only bslib-0.3.1/bslib/inst/fonts/pe03MImSLYBIv1o4X1M8cc9iB_5p.woff |binary bslib-0.3.1/bslib/inst/fonts/pe0qMImSLYBIv1o4X1M8cfe5.woff |binary bslib-0.3.1/bslib/inst/lib/bs5/README.md | 10 bslib-0.3.1/bslib/inst/lib/bs5/dist/js/bootstrap.bundle.min.js | 4 bslib-0.3.1/bslib/inst/lib/bs5/dist/js/bootstrap.bundle.min.js.map | 2 bslib-0.3.1/bslib/inst/lib/bs5/package.json | 28 - bslib-0.3.1/bslib/inst/lib/bs5/scss/_card.scss | 7 bslib-0.3.1/bslib/inst/lib/bs5/scss/_functions.scss | 57 +- bslib-0.3.1/bslib/inst/lib/bs5/scss/_grid.scss | 11 bslib-0.3.1/bslib/inst/lib/bs5/scss/_helpers.scss | 2 bslib-0.3.1/bslib/inst/lib/bs5/scss/_mixins.scss | 1 bslib-0.3.1/bslib/inst/lib/bs5/scss/_modal.scss | 12 bslib-0.3.1/bslib/inst/lib/bs5/scss/_navbar.scss | 34 + bslib-0.3.1/bslib/inst/lib/bs5/scss/_offcanvas.scss | 4 bslib-0.3.1/bslib/inst/lib/bs5/scss/_placeholders.scss |only bslib-0.3.1/bslib/inst/lib/bs5/scss/_reboot.scss | 20 bslib-0.3.1/bslib/inst/lib/bs5/scss/_root.scss | 41 + bslib-0.3.1/bslib/inst/lib/bs5/scss/_toasts.scss | 4 bslib-0.3.1/bslib/inst/lib/bs5/scss/_transitions.scss | 6 bslib-0.3.1/bslib/inst/lib/bs5/scss/_utilities.scss | 52 +- bslib-0.3.1/bslib/inst/lib/bs5/scss/_variables.scss | 173 +++++++ bslib-0.3.1/bslib/inst/lib/bs5/scss/bootstrap-grid.scss | 2 bslib-0.3.1/bslib/inst/lib/bs5/scss/bootstrap-reboot.scss | 2 bslib-0.3.1/bslib/inst/lib/bs5/scss/bootstrap-utilities.scss | 2 bslib-0.3.1/bslib/inst/lib/bs5/scss/bootstrap.scss | 3 bslib-0.3.1/bslib/inst/lib/bs5/scss/forms/_form-control.scss | 2 bslib-0.3.1/bslib/inst/lib/bs5/scss/helpers/_stacks.scss |only bslib-0.3.1/bslib/inst/lib/bs5/scss/helpers/_vr.scss |only bslib-0.3.1/bslib/inst/lib/bs5/scss/mixins/_backdrop.scss |only bslib-0.3.1/bslib/inst/lib/bs5/scss/mixins/_grid.scss | 32 + bslib-0.3.1/bslib/inst/lib/bs5/scss/mixins/_utilities.scss | 33 + bslib-0.3.1/bslib/inst/lib/bs5/scss/utilities/_api.scss | 7 bslib-0.3.1/bslib/inst/lib/bsw3/simplex/font.css | 6 bslib-0.3.1/bslib/inst/lib/bsw3/spacelab/font.css | 12 bslib-0.3.1/bslib/inst/lib/bsw3/yeti/font.css | 18 bslib-0.3.1/bslib/inst/lib/bsw4/dist/simplex/font.css | 6 bslib-0.3.1/bslib/inst/lib/bsw4/dist/spacelab/font.css | 12 bslib-0.3.1/bslib/inst/lib/bsw4/dist/yeti/font.css | 18 bslib-0.3.1/bslib/inst/lib/bsw5/dist/cerulean/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/cerulean/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/cosmo/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/cosmo/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/cosmo/build.scss |only bslib-0.3.1/bslib/inst/lib/bsw5/dist/cyborg/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/cyborg/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/darkly/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/darkly/_variables.scss | 5 bslib-0.3.1/bslib/inst/lib/bsw5/dist/flatly/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/flatly/_variables.scss | 3 bslib-0.3.1/bslib/inst/lib/bsw5/dist/journal/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/journal/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/litera/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/litera/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/lumen/_bootswatch.scss | 11 bslib-0.3.1/bslib/inst/lib/bsw5/dist/lumen/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/lux/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/lux/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/materia/_bootswatch.scss | 68 -- bslib-0.3.1/bslib/inst/lib/bsw5/dist/materia/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/minty/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/minty/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/morph/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/morph/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/pulse/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/pulse/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/quartz/_bootswatch.scss | 27 - bslib-0.3.1/bslib/inst/lib/bsw5/dist/quartz/_variables.scss | 6 bslib-0.3.1/bslib/inst/lib/bsw5/dist/sandstone/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/sandstone/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/simplex/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/simplex/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/simplex/font.css | 6 bslib-0.3.1/bslib/inst/lib/bsw5/dist/sketchy/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/sketchy/_variables.scss | 3 bslib-0.3.1/bslib/inst/lib/bsw5/dist/slate/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/slate/_variables.scss | 4 bslib-0.3.1/bslib/inst/lib/bsw5/dist/solar/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/solar/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/spacelab/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/spacelab/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/spacelab/font.css | 12 bslib-0.3.1/bslib/inst/lib/bsw5/dist/superhero/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/superhero/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/united/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/united/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/vapor/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/vapor/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/yeti/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/yeti/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/yeti/font.css | 18 bslib-0.3.1/bslib/inst/lib/bsw5/dist/zephyr/_bootswatch.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/dist/zephyr/_variables.scss | 2 bslib-0.3.1/bslib/inst/lib/bsw5/package.json | 2 bslib-0.3.1/bslib/inst/package.json | 4 bslib-0.3.1/bslib/man/navs.Rd | 2 bslib-0.3.1/bslib/tests/testthat/_snaps/page.md | 31 - bslib-0.3.1/bslib/tests/testthat/_snaps/zzzz-bs-sass/bs5-imports | 3 bslib-0.3.1/bslib/tools/patches/006-bootswatch-slate-bs5.patch | 2 bslib-0.3.1/bslib/tools/patches/012-bg-utility-contrast-bs5.patch | 9 bslib-0.3.1/bslib/tools/yarn_install.R | 8 133 files changed, 760 insertions(+), 431 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-07-22 0.9.8
2021-01-06 0.9.7
2020-10-29 0.9.6
2020-08-31 0.9.3
2020-08-06 0.9.2
Title: Bindings to Selected 'liblwgeom' Functions for Simple Features
Description: Access to selected functions found in 'liblwgeom' <https://github.com/postgis/postgis/tree/master/liblwgeom>, the light-weight geometry library used by 'PostGIS' <http://postgis.net/>.
Author: Edzer Pebesma [aut, cre] (<https://orcid.org/0000-0001-8049-7069>),
Colin Rundel [ctb],
Andy Teucher [ctb],
liblwgeom developers [cph]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between lwgeom versions 0.2-7 dated 2021-07-28 and 0.2-8 dated 2021-10-06
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ NEWS.md | 4 ++++ configure | 1 + configure.ac | 18 +++++++----------- src/liblwgeom/lwin_wkt_lex.c | 2 +- src/liblwgeom/lwutil.c | 2 +- 7 files changed, 24 insertions(+), 23 deletions(-)
Title: Spatial and Spatio-Temporal Geostatistical Modelling, Prediction
and Simulation
Description: Variogram modelling; simple, ordinary and universal point or block (co)kriging; spatio-temporal kriging; sequential Gaussian or indicator (co)simulation; variogram and variogram map plotting utility functions; supports sf and stars.
Author: Edzer Pebesma [aut, cre] (<https://orcid.org/0000-0001-8049-7069>),
Benedikt Graeler [aut]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between gstat versions 2.0-7 dated 2021-03-19 and 2.0-8 dated 2021-10-06
DESCRIPTION | 6 +- MD5 | 69 +++++++++++++-------------- R/gstat.R | 2 R/stVariogramModels.R | 1 R/variogramST.R | 6 +- build/vignette.rds |binary data/DE_RB_2005.rda |binary data/coalash.rda |binary data/fulmar.rda |binary data/jura.rda |binary data/meuse.all.rda |binary data/meuse.alt.rda |binary data/ncp.grid.rda |binary data/oxford.rda |binary data/pcb.rda |binary data/sic2004.rda |binary data/sic97.rda |binary data/tull.rda |binary data/vv.rda |binary data/walker.rda |binary data/wind.rda |binary inst/doc/gstat.pdf |binary inst/doc/prs.pdf |binary inst/doc/spatio-temporal-kriging.pdf |binary inst/doc/st.pdf |binary inst/external/no2.csv |only src/data.c | 8 +-- src/lm.c | 2 src/mtrx.c | 31 +++++++----- src/s.c | 47 ++++++++---------- src/select.c | 3 - src/userio.c | 9 +-- tests/line.Rout.save | 21 +++++--- tests/stars.Rout.save | 88 +++++++---------------------------- tests/unproj.Rout.save | 10 --- tests/windst.Rout.save | 7 +- 36 files changed, 136 insertions(+), 174 deletions(-)
Title: Eigenvectors from Eigenvalues Sparse Principal Component
Analysis (EESPCA)
Description: Contains logic for computing sparse principal components via the EESPCA method,
which is based on an approximation of the eigenvector/eigenvalue identity.
Includes logic to support execution of the TPower and rifle sparse PCA methods,
as well as logic to estimate the sparsity parameters used by EESPCA, TPower and rifle
via cross-validation to minimize the out-of-sample reconstruction error.
H. Robert Frost (2021) <arXiv:2006.01924>.
Author: H. Robert Frost
Maintainer: H. Robert Frost <rob.frost@dartmouth.edu>
Diff between EESPCA versions 0.3.0 dated 2021-07-16 and 0.4.0 dated 2021-10-06
DESCRIPTION | 6 +++--- MD5 | 6 +++--- R/EESPCA.R | 4 +--- inst/doc/EESPCA_Example.pdf |binary 4 files changed, 7 insertions(+), 9 deletions(-)
Title: Cross-Validation for Model Selection
Description: Cross-validate one or multiple regression and classification models
and get relevant evaluation metrics in a tidy format. Validate the
best model on a test set and compare it to a baseline evaluation.
Alternatively, evaluate predictions from an external model. Currently
supports regression and classification (binary and multiclass).
Described in chp. 5 of Jeyaraman, B. P., Olsen, L. R.,
& Wambugu M. (2019, ISBN: 9781838550134).
Author: Ludvig Renbo Olsen [aut, cre],
Hugh Benjamin Zachariae [aut],
Indrajeet Patil [ctb] (<https://orcid.org/0000-0003-1995-6531>,
@patilindrajeets)
Maintainer: Ludvig Renbo Olsen <r-pkgs@ludvigolsen.dk>
Diff between cvms versions 1.3.1 dated 2021-06-17 and 1.3.2 dated 2021-10-06
DESCRIPTION | 12 MD5 | 35 NEWS.md | 4 R/helpers.R | 5 R/plot_probability_violins.R |only README.md | 646 ++-- build/cvms.pdf |binary inst/doc/Creating_a_confusion_matrix.html | 501 --- inst/doc/available_metrics.html | 242 - inst/doc/cross_validating_custom_functions.html | 1551 ++++------ inst/doc/evaluate_by_id.html | 582 +-- inst/doc/picking_the_number_of_folds_for_cross-validation.html | 962 ++---- tests/testthat/test_baseline.R | 64 tests/testthat/test_cross_validate_fn.R | 163 - tests/testthat/test_evaluate_residuals.R | 12 tests/testthat/test_helpers.R | 7 tests/testthat/test_most_challenging.R | 20 tests/testthat/test_softmax.R | 5 tests/testthat/test_validate_fn.R | 66 19 files changed, 1990 insertions(+), 2887 deletions(-)
Title: Statistical Methods and Models for Claims Reserving in General
Insurance
Description: Various statistical methods and models which are
typically used for the estimation of outstanding claims reserves
in general insurance, including those to estimate the claims
development result as required under Solvency II.
Author: Markus Gesmann [aut, cre],
Daniel Murphy [aut],
Yanwei (Wayne) Zhang [aut],
Alessandro Carrato [aut],
Giuseppe Crupi [ctb],
Christophe Dutang [ctb],
Arnaud Lacoume [ctb],
Arthur Charpentier [ctb],
Mario Wuthrich [aut],
Fabio Concina [aut],
Eric Dal Moro [aut],
Yuriy Krvavych [ctb],
Vincent Goulet [ctb],
Marco De Virgilis [ctb]
Maintainer: Markus Gesmann <markus.gesmann@googlemail.com>
Diff between ChainLadder versions 0.2.12 dated 2021-01-05 and 0.2.13 dated 2021-10-06
DESCRIPTION | 12 MD5 | 28 - build/vignette.rds |binary inst/doc/ChainLadder.html | 970 ++++++++++++++++++--------------------------- inst/doc/NEWS.Rmd | 7 inst/doc/NEWS.html | 592 +++------------------------ man/CLFMdelta.rd | 2 man/ChainLadder-package.Rd | 2 man/ClarkCapeCod.rd | 2 man/ClarkLDF.Rd | 2 man/PaidIncurredChain.Rd | 62 +- man/Table65.rd | 2 man/USAA.Rd | 2 vignettes/ChainLadder.bib | 12 vignettes/NEWS.Rmd | 7 15 files changed, 551 insertions(+), 1151 deletions(-)
Title: Temporal Trend Analysis Graphical Interface
Description: This interface was created to develop a standard procedure
to analyse temporal trend in the framework of the OSPAR convention.
The analysis process run through 4 successive steps : 1) manipulate your data, 2)
select the parameters you want to analyse, 3) build your regulated
time series, 4) perform diagnosis and analysis and 5) read the results.
Statistical analysis call other package function such as Kendall tests
or cusum() function.
Author: David DEVREKER [aut, cre],
Alain LEFEBVRE [aut]
Maintainer: David DEVREKER <David.Devreker@ifremer.fr>
Diff between TTAinterfaceTrendAnalysis versions 1.5.7 dated 2021-05-28 and 1.5.8 dated 2021-10-06
DESCRIPTION | 10 +++++----- MD5 | 14 +++++++------- NAMESPACE | 1 - NEWS | 6 +++++- R/FULLoption.r | 6 +++--- R/TTAinterface.R | 2 +- build/vignette.rds |binary inst/doc/TTAVignette.pdf |binary 8 files changed, 21 insertions(+), 18 deletions(-)
More information about TTAinterfaceTrendAnalysis at CRAN
Permanent link
Title: R Interface to the 'QuantLib' Library
Description: The 'RQuantLib' package makes parts of 'QuantLib' accessible from R
The 'QuantLib' project aims to provide a comprehensive software framework
for quantitative finance. The goal is to provide a standard open source library
for quantitative analysis, modeling, trading, and risk management of financial
assets.
Author: Dirk Eddelbuettel, Khanh Nguyen (2009-2010), Terry Leitch (since 2016)
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RQuantLib versions 0.4.13 dated 2021-09-02 and 0.4.14 dated 2021-10-06
ChangeLog | 34 ++++++++++++++++++++++++++++++++++ DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ configure | 18 +++++++++--------- configure.ac | 31 +++++++++++-------------------- inst/NEWS.Rd | 17 +++++++++++++++++ src/calendars.cpp | 41 ++++++++++++++++++++++++++++++++++++++++- 7 files changed, 121 insertions(+), 40 deletions(-)
Title: Bayesian Regression with Meshed Gaussian Processes
Description: Fits Bayesian spatial or spatiotemporal multivariate regression models based on latent Meshed Gaussian Processes (MGP) as described in Peruzzi, Banerjee, Finley (2020) <doi:10.1080/01621459.2020.1833889> and Peruzzi, Banerjee, Dunson, and Finley (2021) <arXiv:2101.03579>. Funded by ERC grant 856506 and NIH grant R01ES028804.
Author: Michele Peruzzi
Maintainer: Michele Peruzzi <michele.peruzzi@duke.edu>
Diff between meshed versions 0.1.3 dated 2021-10-05 and 0.1.4 dated 2021-10-06
DESCRIPTION | 8 +- MD5 | 38 ++++++------ build/partial.rdb |binary inst/doc/multivariate_irregular.R | 12 +-- inst/doc/multivariate_irregular.Rmd | 15 ++-- inst/doc/multivariate_irregular.html | 28 ++++---- inst/doc/univariate_gridded.R | 6 - inst/doc/univariate_gridded.Rmd | 8 +- inst/doc/univariate_gridded.html | 22 +++---- inst/doc/univariate_irregular.R | 14 ++-- inst/doc/univariate_irregular.Rmd | 14 ++-- inst/doc/univariate_irregular.html | 34 +++++----- inst/doc/univariate_irregular_poisson.R | 13 +--- inst/doc/univariate_irregular_poisson.Rmd | 15 ++-- inst/doc/univariate_irregular_poisson.html | 91 ++++++++++++++--------------- src/mcmc_hmc_nodes.cpp | 3 vignettes/multivariate_irregular.Rmd | 15 ++-- vignettes/univariate_gridded.Rmd | 8 +- vignettes/univariate_irregular.Rmd | 14 ++-- vignettes/univariate_irregular_poisson.Rmd | 15 ++-- 20 files changed, 186 insertions(+), 187 deletions(-)
Title: Estimating Local Gaussian Parameters
Description: Computational routines for estimating local Gaussian parameters. Local Gaussian parameters are useful for characterizing and testing for non-linear dependence within bivariate data. See e.g. Tjostheim and Hufthammer, Local Gaussian correlation: A new measure of dependence, Journal of Econometrics, 2013, Volume 172 (1), pages 33-48 <DOI:10.1016/j.jeconom.2012.08.001>.
Author: Tore Selland Kleppe <tore.kleppe@uis.no>
Maintainer: Tore Selland Kleppe <tore.kleppe@uis.no>
Diff between localgauss versions 0.40 dated 2016-11-14 and 0.41 dated 2021-10-06
DESCRIPTION | 11 ++-- MD5 | 12 +++-- NAMESPACE | 4 + R/localgauss.R | 66 +++++++++++++++++++++++++++++ build |only inst/CITATION | 42 +++++++++--------- man/localgauss.Rd | 109 ++++++++++++++++++++++++------------------------- man/plot.localgauss.Rd |only 8 files changed, 157 insertions(+), 87 deletions(-)
Title: Methods for Correlation Analysis
Description: Lightweight package for computing different kinds
of correlations, such as partial correlations, Bayesian correlations,
multilevel correlations, polychoric correlations, biweight
correlations, distance correlations and more. Part of the 'easystats'
ecosystem.
Author: Dominique Makowski [aut, inv] (<https://orcid.org/0000-0001-5375-9967>,
@Dom_Makowski),
Brenton M. Wiernik [aut, cre] (<https://orcid.org/0000-0001-9560-6336>,
@bmwiernik),
Indrajeet Patil [aut] (<https://orcid.org/0000-0003-1995-6531>,
@patilindrajeets),
Daniel Lüdecke [aut] (<https://orcid.org/0000-0002-8895-3206>,
@strengejacke),
Mattan S. Ben-Shachar [aut] (<https://orcid.org/0000-0002-4287-4801>,
@mattansb),
Mark White [rev],
Maximilian M. Rabe [rev] (<https://orcid.org/0000-0002-2556-5644>)
Maintainer: Brenton M. Wiernik <brenton@wiernik.org>
Diff between correlation versions 0.7.0 dated 2021-09-05 and 0.7.1 dated 2021-10-06
DESCRIPTION | 6 ++-- MD5 | 24 ++++++++-------- NEWS.md | 6 ++++ R/cor_smooth.R | 10 +++---- R/cor_test.R | 3 +- R/correlation.R | 4 +- R/visualisation_recipe.cor_test.R | 2 - R/visualisation_recipe.easycormatrix.R | 2 - inst/doc/multilevel.html | 47 +++++++++++---------------------- man/cor_smooth.Rd | 6 ++-- man/cor_test.Rd | 7 ++-- man/cor_to_p.Rd | 3 +- man/correlation.Rd | 7 ++-- 13 files changed, 62 insertions(+), 65 deletions(-)
Title: Pearson Distribution System
Description: Implementation of the Pearson distribution system, including full
support for the (d,p,q,r)-family of functions for probability distributions
and fitting via method of moments and maximum likelihood method.
Author: Martin Becker [aut, cre] (<https://orcid.org/0000-0003-2336-9751>),
Stefan Kl<f6><df>ner [aut] (<https://orcid.org/0000-0002-6558-7370>),
Joel Heinrich [ctb]
Maintainer: Martin Becker <martin.becker@mx.uni-saarland.de>
Diff between PearsonDS versions 1.2 dated 2021-06-10 and 1.2.1 dated 2021-10-06
DESCRIPTION | 8 MD5 | 10 NEWS | 7 configure | 3239 +++++++++++++++++++++++++++----------------------------- configure.ac | 26 src/config.h.in | 21 6 files changed, 1666 insertions(+), 1645 deletions(-)
Title: Fitting Finite Mixture of Scale Mixture of Skew-Normal
Distributions
Description: Functions to fit finite mixture of scale mixture of skew-normal (FM-SMSN) distributions, details in Prates, Lachos and Cabral (2013) <doi: 10.18637/jss.v054.i12>, Cabral, Lachos and Prates (2012) <doi:10.1016/j.csda.2011.06.026> and Basso, Lachos, Cabral and Ghosh (2010) <doi:10.1016/j.csda.2009.09.031>.
Author: Marcos Prates [aut, cre, trl],
Victor Lachos [aut],
Celso Cabral [aut]
Maintainer: Marcos Prates <marcosop@est.ufmg.br>
Diff between mixsmsn versions 1.1-9 dated 2021-05-12 and 1.1-10 dated 2021-10-06
ChangeLog | 6 + DESCRIPTION | 8 +- MD5 | 14 ++-- inst/CITATION | 4 - man/bmi.Rd | 119 ++++++++++++++++++------------------ man/faithful.Rd | 177 +++++++++++++++++++++++++++---------------------------- man/smsn.mix.Rd | 3 man/smsn.mmix.Rd | 6 - 8 files changed, 168 insertions(+), 169 deletions(-)
Title: Variational Bayes Latent Position Cluster Model for Networks
Description: Fit and simulate latent position and cluster models for network data, using a fast Variational Bayes approximation developed in Salter-Townshend and Murphy (2013) <doi:10.1016/j.csda.2012.08.004>.
Author: Michael Salter-Townshend
Maintainer: Michael Salter-Townshend <mike.saltertownshend@gmail.com>
Diff between VBLPCM versions 2.4.7 dated 2020-12-15 and 2.4.8 dated 2021-10-06
CHANGELOG | 2 ++ DESCRIPTION | 11 +++++------ MD5 | 10 +++++----- configure | 15 ++++++++++++++- configure.ac | 6 ++++-- man/VBLPCM-package.Rd | 4 ++-- 6 files changed, 32 insertions(+), 16 deletions(-)
Title: Scoring EQ-5d Descriptive System
Description: EQ-5D is a standard instrument (<https://euroqol.org/eq-5d-instruments/>) that measures the quality of life
often used in clinical and economic evaluations of health care technologies. Both adult versions of EQ-5D (EQ-5D-3L and EQ-5D-5L)
contain a descriptive system and visual analog scale. The descriptive system measures the patient's health in 5 dimensions:
the 5L versions has 5 levels and 3L version has 3 levels. The descriptive system scores are usually converted to index values
using country specific values sets (that incorporates the country preferences). This package allows the calculation of both descriptive system
scores to the index value scores. The value sets for EQ-5D-3L are from the references mentioned in the website <https://euroqol.org/eq-5d-instruments/eq-5d-3l-about/valuation/>
The value sets for EQ-5D-3L for a total of 31 countries are used for the valuation (see the user guide for a complete list of references).
The value sets for EQ-5D-5L are obtained from references mentioned in the <https://euroqol.org/eq-5d-instruments/eq-5d-5l-about/valuation-standard-value-sets/> and other sources.
The value sets for EQ-5D-5L for a total of 17 countries are used for the valuation (see the user guide for a complete list of references).
The package can also be used to map 5L scores to 3L index values for 10 countries: Denmark, France, Germany, Japan, Netherlands, Spain, Thailand, UK, USA, and Zimbabwe.
The value set and method for mapping are obtained from Van Hout et al (2012) <doi: 10.1016/j.jval.2012.02.008>.
Author: Sheeja Manchira Krishnan [aut, cre]
Maintainer: Sheeja Manchira Krishnan <sheejamk@gmail.com>
Diff between valueEQ5D versions 0.7.1 dated 2021-04-06 and 0.7.2 dated 2021-10-06
DESCRIPTION | 8 - MD5 | 10 - inst/doc/User_Guide.R | 20 +-- inst/doc/User_Guide.Rmd | 20 +-- inst/doc/User_Guide.html | 246 ++++++++--------------------------------------- vignettes/User_Guide.Rmd | 20 +-- 6 files changed, 85 insertions(+), 239 deletions(-)
Title: Create, Modify and Analyse Phylogenetic Trees
Description: Efficient implementations of functions for the creation,
modification and analysis of phylogenetic trees.
Applications include:
generation of trees with specified shapes;
tree rearrangement;
analysis of tree shape;
rooting of trees and extraction of subtrees;
calculation and depiction of split support;
calculation of ancestor-descendant relationships,
of 'stemwardness' (Asher & Smith, 2021) <doi:10.1093/sysbio/syab072>,
and of tree balance (Mir et al. 2013) <doi:10.1016/j.mbs.2012.10.005>;
artificial extinction (Asher & Smith, 2021) <doi:10.1093/sysbio/syab072>;
import and export of trees from Newick, Nexus (Maddison et al. 1997)
<doi:10.1093/sysbio/46.4.590>,
and TNT <http://www.lillo.org.ar/phylogeny/tnt/> formats;
and analysis of splits and cladistic information.
Author: Martin R. Smith [aut, cre, cph]
(<https://orcid.org/0000-0001-5660-1727>),
Emmanuel Paradis [cph] (<https://orcid.org/0000-0003-3092-2199>)
Maintainer: Martin R. Smith <martin.smith@durham.ac.uk>
Diff between TreeTools versions 1.5.0 dated 2021-09-08 and 1.5.1 dated 2021-10-06
DESCRIPTION | 12 ++++---- MD5 | 46 ++++++++++++++++----------------- NEWS.md | 6 ++++ R/as.multiPhylo.R | 5 ++- R/parse_files.R | 13 +++++++-- build/partial.rdb |binary build/vignette.rds |binary inst/WORDLIST | 1 inst/doc/filesystem-navigation.Rmd | 2 - inst/doc/filesystem-navigation.html | 4 +- inst/doc/load-data.Rmd | 2 - inst/doc/load-data.html | 4 +- inst/doc/load-trees.Rmd | 2 - inst/doc/load-trees.html | 10 +++---- man/MatrixToPhyDat.Rd | 5 ++- man/figures/Stemwardness.png |binary src/splits_to_tree.cpp | 2 - tests/testthat/test-ImposeConstraint.R | 5 ++- tests/testthat/test-consensus.R | 7 ++--- tests/testthat/test-parsers.R | 13 +++++++++ tests/testthat/test-tree_rearrange.R | 13 +++++---- vignettes/filesystem-navigation.Rmd | 2 - vignettes/load-data.Rmd | 2 - vignettes/load-trees.Rmd | 2 - 24 files changed, 97 insertions(+), 61 deletions(-)
Title: Presmoothed Estimation in Survival Analysis
Description: Presmoothed estimators of survival, density, cumulative and non-cumulative hazard functions with right-censored survival data. For details, see Lopez-de-Ullibarri and Jacome (2013) <doi:10.18637/jss.v054.i11>.
Author: Ignacio Lopez de Ullibarri [aut, cre],
Maria Amalia Jacome [aut]
Maintainer: Ignacio Lopez de Ullibarri <ilu@udc.es>
Diff between survPresmooth versions 1.1-10 dated 2017-09-06 and 1.1-11 dated 2021-10-06
ChangeLog | 9 DESCRIPTION | 17 MD5 | 67 +-- R/presmooth.R | 925 +++++++++++++++++++++++---------------------- build |only inst/CITATION | 3 man/control.presmooth.Rd | 110 +++-- man/presmooth.Rd | 499 +++++++++++++++--------- man/print.survPresmooth.Rd | 59 +- man/pscheck.Rd | 36 + src/alphaintegrand.c | 4 src/c1integrand1.c | 4 src/c1integrand2.c | 4 src/densuncens.c | 8 src/dintegrand.c | 8 src/dweibullder.c | 14 src/ecdfuncens.c | 4 src/funplugin.c | 20 src/isevect.c | 60 +- src/kernel.c | 8 src/kernelboundary.c | 4 src/kernelder.c | 8 src/lscv.c | 14 src/nadarayawatson.c | 17 src/nadarayawatsonder.c | 26 - src/pilot2forhintegrand.c | 26 - src/plogistder.c | 12 src/presmdens2der.c | 6 src/presmdensfast.c | 8 src/presmestim.c | 145 +++---- src/presmtwfast.c | 10 src/simpson.c | 4 src/termsmise.c | 26 - src/termsmisenopresmooth.c | 12 src/weightspresmkm.c | 4 35 files changed, 1239 insertions(+), 942 deletions(-)
Title: Spherical Principal Curves
Description: Fitting dimension reduction methods to data lying on two-dimensional sphere.
This package provides principal circle, principal geodesic analysis, Hauberg's principal curves,
and spherical principal curves. Moreover, it offers the method of locally
defined principal geodesics which is underway.The detailed procedures
are described in Lee, J., Kim, J.-H. and Oh, H.-S. (2021) <doi:10.1109/TPAMI.2020.3025327>.
Also see Kim, J.-H., Lee, J. and Oh, H.-S. (2020) <arXiv:2003.02578>.
Author: Jongmin Lee [aut, cre],
Jang-Hyun Kim [ctb],
Hee-Seok Oh [aut]
Maintainer: Jongmin Lee <jongminlee9218@gmail.com>
Diff between spherepc versions 0.1.5 dated 2021-10-06 and 0.1.6 dated 2021-10-06
DESCRIPTION | 6 +++--- MD5 | 6 +++--- R/spherepc.R | 34 +++++++++++++++++++++------------- man/SPC.Rd | 4 ++-- 4 files changed, 29 insertions(+), 21 deletions(-)
Title: Handling and Manipulating Remote Sensing Data
Description: Herein, we provide a broad variety of functions which are useful
for handling, manipulating, and visualizing satellite-based remote sensing
data. These operations range from mere data import and layer handling (eg
subsetting), over Raster* typical data wrangling (eg crop, extend), to more
sophisticated (pre-)processing tasks typically applied to satellite imagery
(eg atmospheric and topographic correction). This functionality is
complemented by a full access to the satellite layers' metadata at any
stage and the documentation of performed actions in a separate log file.
Currently available sensors include Landsat 4-5 (TM), 7 (ETM+), and 8
(OLI/TIRS Combined), and additional compatibility is ensured for the Landsat
Global Land Survey data set.
Author: Thomas Nauss, Hanna Meyer, Tim Appelhans, Florian Detsch
Maintainer: Florian Detsch <fdetsch@web.de>
Diff between satellite versions 1.0.2 dated 2019-12-09 and 1.0.3 dated 2021-10-06
DESCRIPTION | 10 MD5 | 177 - NAMESPACE | 214 - NEWS | 113 NEWS.md | 14 R/AAAsatelliteClasses.R | 132 R/RcppExports.R | 30 R/alignGeometry.R | 216 - R/brick.R | 102 R/calcAtmosCorr.R | 13 R/calcDODN.R | 139 R/calcEarthSunDist.R | 138 R/calcPathRadDOS.R | 13 R/calcTOAIrradRadRef.R | 218 - R/calcTOAIrradTable.R | 4 R/calcTopoCorr.R | 286 - R/compFilePathLandsat.R | 222 - R/compMetaLandsat.R | 336 +- R/convRad2BT.R | 176 - R/convRad2Ref.R | 236 - R/convRef2RadLinear.R | 58 R/convSC2Rad.R | 224 - R/convSC2Ref.R | 254 - R/crop.R | 162 - R/demTools.R | 174 - R/extend.R | 152 R/lutInfo.R | 11 R/maskInvarFeatures.R | 253 - R/names.R | 102 R/plot.R | 168 - R/print.R | 32 R/satInfo.R | 1526 +++++----- R/satellite-package.R | 115 R/show.R | 12 R/stack.R | 106 R/subset.R | 184 - R/sysdata.rda |binary README.md | 70 build/partial.rdb |only build/vignette.rds |binary data/l7.rda |binary data/l8.rda |binary inst/doc/landsat-calibration.R | 22 inst/doc/landsat-calibration.Rmd | 88 inst/doc/landsat-calibration.html | 532 +-- inst/doc/satellite.R | 78 inst/doc/satellite.Rmd | 226 - inst/doc/satellite.html | 886 ++--- inst/extdata/LC08_L1TP_195025_20130707_20170503_01_T1_MTL.txt | 450 +- inst/extdata/LE07_L1TP_195025_20010730_20170204_01_T1_MTL.txt | 480 +-- inst/testdata/LC8/LC81950252013188LGN00_MTL.txt | 412 +- inst/testdata/LE7/LE71950252001211EDC00_MTL.txt | 376 +- inst/testdata/LT05/LT05_L1TP_167055_20000309_20161214_01_T1_MTL.txt | 388 +- man/Satellite-class.Rd | 2 man/SatelliteLayers-class.Rd | 2 man/SatelliteLog-class.Rd | 2 man/SatelliteMetaData-class.Rd | 2 man/calcAtmosCorr.Rd | 13 man/calcDODN.Rd | 3 man/calcEarthSunDist.Rd | 4 man/calcPathRadDOS.Rd | 13 man/calcTOAIrradRadRef.Rd | 2 man/calcTOAIrradTable.Rd | 4 man/convRad2BT.Rd | 2 man/convRad2Ref.Rd | 4 man/convRef2RadLinear.Rd | 2 man/convSC2Rad.Rd | 2 man/convSC2Ref.Rd | 4 man/l7.Rd | 4 man/l8.Rd | 4 man/lutInfo.Rd | 11 man/maskInvarFeatures.Rd | 7 man/satellite-package.Rd | 3 src/RcppExports.cpp | 5 tests/testthat.R | 138 tests/testthat/test-calcAtmosCorr.R | 156 - tests/testthat/test-calcDODN.R | 50 tests/testthat/test-calcEarthSunDist.R | 36 tests/testthat/test-calcPathRadDOS.R | 122 tests/testthat/test-calcTOAIrradModel.R | 82 tests/testthat/test-calcTOAIrradRadRef.R | 138 tests/testthat/test-calcTOAIrradTable.R | 84 tests/testthat/test-compMetaLandsat.R | 252 - tests/testthat/test-extend.R | 64 tests/testthat/test-maskInvarFeatures.R | 40 tests/testthat/test-satInfo.R | 40 tests/testthat/test-satInvarFeatures.R | 30 tests/testthat/test-satellite.R | 224 - vignettes/landsat-calibration.Rmd | 88 vignettes/satellite.Rmd | 226 - 90 files changed, 5930 insertions(+), 6265 deletions(-)
Title: HTML Output Formats and Templates for 'rmarkdown' Documents
Description: HTML formats and templates for 'rmarkdown' documents, with some extra
features such as automatic table of contents, lightboxed figures, dynamic
crosstab helper.
Author: Julien Barnier [aut, cre]
Maintainer: Julien Barnier <julien.barnier@cnrs.fr>
Diff between rmdformats versions 1.0.2 dated 2021-04-19 and 1.0.3 dated 2021-10-06
rmdformats-1.0.2/rmdformats/NEWS |only rmdformats-1.0.3/rmdformats/DESCRIPTION | 8 rmdformats-1.0.3/rmdformats/MD5 | 39 +- rmdformats-1.0.3/rmdformats/NEWS.md |only rmdformats-1.0.3/rmdformats/R/downcute.R | 25 + rmdformats-1.0.3/rmdformats/R/html_template.R | 39 +- rmdformats-1.0.3/rmdformats/README.md | 41 -- rmdformats-1.0.3/rmdformats/inst/rmarkdown/templates/downcute/skeleton/skeleton.Rmd | 15 rmdformats-1.0.3/rmdformats/inst/rmarkdown/templates/html_clean/skeleton/skeleton.Rmd | 15 rmdformats-1.0.3/rmdformats/inst/rmarkdown/templates/html_docco/skeleton/skeleton.Rmd | 17 - rmdformats-1.0.3/rmdformats/inst/rmarkdown/templates/material/skeleton/skeleton.Rmd | 14 rmdformats-1.0.3/rmdformats/inst/rmarkdown/templates/readthedown/skeleton/skeleton.Rmd | 15 rmdformats-1.0.3/rmdformats/inst/rmarkdown/templates/robobook/skeleton/skeleton.Rmd | 14 rmdformats-1.0.3/rmdformats/inst/templates/downcute/downcute.css | 24 + rmdformats-1.0.3/rmdformats/inst/templates/downcute/downcute.js | 167 ++-------- rmdformats-1.0.3/rmdformats/inst/templates/downcute/downcute_chaos.css |only rmdformats-1.0.3/rmdformats/inst/templates/downcute/downcute_styles.js |only rmdformats-1.0.3/rmdformats/inst/templates/html_clean/clean.css | 21 - rmdformats-1.0.3/rmdformats/inst/templates/readthedown/readthedown.css | 3 rmdformats-1.0.3/rmdformats/inst/templates/robobook/robobook.css | 21 - rmdformats-1.0.3/rmdformats/inst/templates/template.html | 4 rmdformats-1.0.3/rmdformats/man/downcute.Rd | 9 rmdformats-1.0.3/rmdformats/man/figures/downcute_chaos.png |only 23 files changed, 198 insertions(+), 293 deletions(-)
Title: The Reinert Method for Textual Data Clustering
Description: An R implementation of the Reinert text clustering method. For more
details about the algorithm see the included vignettes or Reinert (1990)
<doi:10.1177/075910639002600103>.
Author: Julien Barnier [aut, cre],
Florian Privé [ctb]
Maintainer: Julien Barnier <julien.barnier@cnrs.fr>
Diff between rainette versions 0.2.0 dated 2021-06-25 and 0.2.1 dated 2021-10-06
DESCRIPTION | 8 ++++---- MD5 | 28 ++++++++++++++-------------- NEWS.md | 12 +++++++++--- R/plot.R | 12 ++++++++++-- R/rainette.R | 7 +++++-- R/rainette2_explor.R | 2 +- R/rainette_explor.R | 2 +- R/shiny.R | 30 ++++++++++++++++++++++++++---- R/stats.R | 10 ++++++++++ README.md | 8 +------- build/partial.rdb |binary build/vignette.rds |binary inst/doc/algorithmes.html | 4 ++-- inst/doc/introduction_en.html | 10 +++++----- inst/doc/introduction_usage.html | 10 +++++----- 15 files changed, 93 insertions(+), 50 deletions(-)
Title: Functions to Make Surveys Processing Easier
Description: Set of functions to make the processing and analysis of
surveys easier : interactive shiny apps and addins for data recoding,
contingency tables, dataset metadata handling, and several convenience
functions.
Author: Julien Barnier [aut, cre],
François Briatte [aut],
Joseph Larmarange [aut]
Maintainer: Julien Barnier <julien.barnier@cnrs.fr>
Diff between questionr versions 0.7.4 dated 2020-11-30 and 0.7.5 dated 2021-10-06
DESCRIPTION | 8 ++--- MD5 | 31 +++++++++++---------- NEWS.md | 8 +++++ R/describe.R | 20 +++++++++---- R/iorder.R | 2 - R/weighting.R | 30 +++++++++++++------- build/vignette.rds |binary data/fecondite.RData |binary data/fertility.RData |binary data/happy.RData |binary data/hdv2003.RData |binary data/rp2012.RData |binary data/rp99.RData |binary inst/doc/recoding_addins.html | 44 ++---------------------------- man/wtd.table.Rd | 7 ++++ tests/testthat/test_describe.R |only tests/testthat/test_weighting.R | 58 +++++++++++++++++++++++++++++++--------- 17 files changed, 118 insertions(+), 90 deletions(-)
Title: Functions to Efficiently Access NFL Play by Play Data
Description: A set of functions to access National Football
League play-by-play data from <https://www.nfl.com/>.
Author: Sebastian Carl [aut],
Ben Baldwin [cre, aut],
Lee Sharpe [ctb],
Maksim Horowitz [ctb],
Ron Yurko [ctb],
Samuel Ventura [ctb],
Tan Ho [ctb],
John Edwards [ctb]
Maintainer: Ben Baldwin <bbaldwin206@gmail.com>
Diff between nflfastR versions 4.2.0 dated 2021-08-03 and 4.3.0 dated 2021-10-06
DESCRIPTION | 21 +++++---- MD5 | 50 +++++++++++----------- NAMESPACE | 6 -- NEWS.md | 17 +++++++ R/aggregate_game_stats.R | 77 ++++++++++++++++++++++++++++++---- R/build_nflfastR_pbp.R | 25 ----------- R/helper_add_nflscrapr_mutations.R | 2 R/helper_additional_functions.R | 6 ++ R/helper_database_functions.R | 13 ++--- R/helper_scrape_gc.R | 2 R/helper_scrape_nfl.R | 2 R/helper_tidy_play_stats.R | 1 R/load_pbp.R | 83 +++++-------------------------------- R/load_player_stats.R | 45 ++++++++++---------- R/nflfastR-package.R | 7 --- R/report.R |only R/top-level_scraper.R | 61 +-------------------------- R/utils.R | 73 +++++++++----------------------- man/build_nflfastR_pbp.Rd | 15 ------ man/calculate_player_stats.Rd | 5 ++ man/fast_scraper.Rd | 14 ------ man/fast_scraper_roster.Rd | 5 -- man/fast_scraper_schedules.Rd | 5 -- man/load_pbp.Rd | 32 ++++++++------ man/load_player_stats.Rd | 22 ++++++--- man/nflfastR-package.Rd | 4 - man/report.Rd |only 27 files changed, 252 insertions(+), 341 deletions(-)
Title: Markov Models for Health Economic Evaluations
Description: An implementation of the modelling and reporting features described
in reference textbook and guidelines (Briggs, Andrew, et al. Decision
Modelling for Health Economic Evaluation. Oxford Univ. Press, 2011;
Siebert, U. et al. State-Transition Modeling. Medical Decision Making
32, 690-700 (2012).): deterministic and probabilistic sensitivity analysis,
heterogeneity analysis, time dependency on state-time and model-time
(semi-Markov and non-homogeneous Markov models), etc.
Author: Kevin Zarca [aut, cre],
Antoine Filipovic-Pierucci [aut],
Matthew Wiener [ctb],
Zden ek Kabat [ctb],
Vojtech Filipec [ctb],
Jordan Amdahl [ctb],
Yonatan Carranza Alarcon [ctb],
Vince Daniels [ctb]
Maintainer: Kevin Zarca <kevin.zarca@gmail.com>
Diff between heemod versions 0.14.2 dated 2021-01-22 and 0.14.4 dated 2021-10-06
heemod-0.14.2/heemod/inst/doc/e_probabilistic.R |only heemod-0.14.2/heemod/inst/doc/g_heterogeneity.R |only heemod-0.14.2/heemod/inst/doc/h_tabular.R |only heemod-0.14.2/heemod/inst/doc/k_calibration.R |only heemod-0.14.4/heemod/DESCRIPTION | 20 heemod-0.14.4/heemod/MD5 | 123 - heemod-0.14.4/heemod/NEWS.md | 3 heemod-0.14.4/heemod/R/sensitivity_print.R | 2 heemod-0.14.4/heemod/build/vignette.rds |binary heemod-0.14.4/heemod/inst/doc/a_introduction.R | 70 heemod-0.14.4/heemod/inst/doc/a_introduction.Rmd | 13 heemod-0.14.4/heemod/inst/doc/a_introduction.html | 416 ----- heemod-0.14.4/heemod/inst/doc/b_time_dependency.R | 24 heemod-0.14.4/heemod/inst/doc/b_time_dependency.Rmd | 11 heemod-0.14.4/heemod/inst/doc/b_time_dependency.html | 328 --- heemod-0.14.4/heemod/inst/doc/c_homogeneous.R | 6 heemod-0.14.4/heemod/inst/doc/c_homogeneous.Rmd | 7 heemod-0.14.4/heemod/inst/doc/c_homogeneous.html | 478 +---- heemod-0.14.4/heemod/inst/doc/d_non_homogeneous.R | 6 heemod-0.14.4/heemod/inst/doc/d_non_homogeneous.Rmd | 7 heemod-0.14.4/heemod/inst/doc/d_non_homogeneous.html | 550 +----- heemod-0.14.4/heemod/inst/doc/e_probabilistic.Rmd | 12 heemod-0.14.4/heemod/inst/doc/e_probabilistic.html | 620 +------ heemod-0.14.4/heemod/inst/doc/f_sensitivity.R | 185 -- heemod-0.14.4/heemod/inst/doc/f_sensitivity.Rmd | 12 heemod-0.14.4/heemod/inst/doc/f_sensitivity.html | 417 ----- heemod-0.14.4/heemod/inst/doc/g_heterogeneity.Rmd | 12 heemod-0.14.4/heemod/inst/doc/g_heterogeneity.html | 460 +---- heemod-0.14.4/heemod/inst/doc/h_tabular.Rmd | 13 heemod-0.14.4/heemod/inst/doc/h_tabular.html | 726 -------- heemod-0.14.4/heemod/inst/doc/i_reproduction.R | 259 --- heemod-0.14.4/heemod/inst/doc/i_reproduction.Rmd | 11 heemod-0.14.4/heemod/inst/doc/i_reproduction.html | 824 +++------- heemod-0.14.4/heemod/inst/doc/j_survival.R | 167 -- heemod-0.14.4/heemod/inst/doc/j_survival.Rmd | 11 heemod-0.14.4/heemod/inst/doc/j_survival.html | 557 +----- heemod-0.14.4/heemod/inst/doc/k_calibration.Rmd | 6 heemod-0.14.4/heemod/inst/doc/k_calibration.html | 348 ---- heemod-0.14.4/heemod/inst/tabular/thr/output/acceptability.pdf |binary heemod-0.14.4/heemod/inst/tabular/thr/output/acceptability.png |binary heemod-0.14.4/heemod/inst/tabular/thr/output/cycle_values.csv | 4 heemod-0.14.4/heemod/inst/tabular/thr/output/dsa.csv | 40 heemod-0.14.4/heemod/inst/tabular/thr/output/dsa.pdf |binary heemod-0.14.4/heemod/inst/tabular/thr/output/dsa.png |binary heemod-0.14.4/heemod/inst/tabular/thr/output/dsa_diff.pdf |binary heemod-0.14.4/heemod/inst/tabular/thr/output/dsa_diff.png |binary heemod-0.14.4/heemod/inst/tabular/thr/output/icer_by_group.csv | 2 heemod-0.14.4/heemod/inst/tabular/thr/output/psa.pdf |binary heemod-0.14.4/heemod/inst/tabular/thr/output/psa.png |binary heemod-0.14.4/heemod/inst/tabular/thr/output/psa_values.csv | 40 heemod-0.14.4/heemod/inst/tabular/thr/output/state_count_plot.pdf |binary heemod-0.14.4/heemod/inst/tabular/thr/output/state_count_plot.png |binary heemod-0.14.4/heemod/inst/tabular/thr/output/state_counts.csv | 10 heemod-0.14.4/heemod/tests/testthat/Rplots.pdf |only heemod-0.14.4/heemod/vignettes/a_introduction.Rmd | 13 heemod-0.14.4/heemod/vignettes/b_time_dependency.Rmd | 11 heemod-0.14.4/heemod/vignettes/c_homogeneous.Rmd | 7 heemod-0.14.4/heemod/vignettes/d_non_homogeneous.Rmd | 7 heemod-0.14.4/heemod/vignettes/e_probabilistic.Rmd | 12 heemod-0.14.4/heemod/vignettes/f_sensitivity.Rmd | 12 heemod-0.14.4/heemod/vignettes/g_heterogeneity.Rmd | 12 heemod-0.14.4/heemod/vignettes/h_tabular.Rmd | 13 heemod-0.14.4/heemod/vignettes/i_reproduction.Rmd | 11 heemod-0.14.4/heemod/vignettes/j_survival.Rmd | 11 heemod-0.14.4/heemod/vignettes/k_calibration.Rmd | 6 65 files changed, 1680 insertions(+), 5235 deletions(-)
Title: Download Map Data from GISCO API - Eurostat
Description: Tools to download data from the GISCO (Geographic Information
System of the Commission) Eurostat database
<https://ec.europa.eu/eurostat/web/gisco>. Global and European map
data available. This package is in no way officially related to or
endorsed by Eurostat.
Author: Diego Hernangómez [aut, cre, cph]
(<https://orcid.org/0000-0001-8457-4658>, rOpenGov),
EuroGeographics [cph] (for the administrative boundaries.),
Vincent Arel-Bundock [cph] (<https://orcid.org/0000-0003-2042-7063>,
for the gisco_countrycode dataset.)
Maintainer: Diego Hernangómez <diego.hernangomezherrero@gmail.com>
Diff between giscoR versions 0.3.0 dated 2021-09-27 and 0.3.1 dated 2021-10-06
giscoR-0.3.0/giscoR/R/sysdata.rda |only giscoR-0.3.1/giscoR/DESCRIPTION | 34 giscoR-0.3.1/giscoR/MD5 | 137 +- giscoR-0.3.1/giscoR/NAMESPACE | 1 giscoR-0.3.1/giscoR/NEWS.md | 27 giscoR-0.3.1/giscoR/R/data.R | 12 giscoR-0.3.1/giscoR/R/gisco_attributions.R | 51 - giscoR-0.3.1/giscoR/R/gisco_bulk_download.R | 20 giscoR-0.3.1/giscoR/R/gisco_cache.R | 52 - giscoR-0.3.1/giscoR/R/gisco_check_access.R |only giscoR-0.3.1/giscoR/R/gisco_clear_cache.R | 21 giscoR-0.3.1/giscoR/R/gisco_get_airports.R | 133 +- giscoR-0.3.1/giscoR/R/gisco_get_coastallines.R | 24 giscoR-0.3.1/giscoR/R/gisco_get_countries.R | 27 giscoR-0.3.1/giscoR/R/gisco_get_grid.R | 117 +- giscoR-0.3.1/giscoR/R/gisco_get_healthcare.R | 58 - giscoR-0.3.1/giscoR/R/gisco_get_lau.R | 261 ++++- giscoR-0.3.1/giscoR/R/gisco_get_nuts.R | 25 giscoR-0.3.1/giscoR/R/gisco_get_postalcodes.R |only giscoR-0.3.1/giscoR/R/gisco_get_units.R | 376 ++++--- giscoR-0.3.1/giscoR/R/gisco_get_urban_audit.R | 64 - giscoR-0.3.1/giscoR/R/utils_downloads.R | 490 ++++------ giscoR-0.3.1/giscoR/R/utils_names.R | 13 giscoR-0.3.1/giscoR/README.md | 12 giscoR-0.3.1/giscoR/data/gisco_coastallines.rda |binary giscoR-0.3.1/giscoR/data/gisco_countries.rda |binary giscoR-0.3.1/giscoR/data/gisco_countrycode.rda |binary giscoR-0.3.1/giscoR/data/gisco_db.rda |binary giscoR-0.3.1/giscoR/data/gisco_nuts.rda |binary giscoR-0.3.1/giscoR/data/tgs00026.rda |binary giscoR-0.3.1/giscoR/inst/COPYRIGHTS |only giscoR-0.3.1/giscoR/inst/doc/giscoR.R | 124 +- giscoR-0.3.1/giscoR/inst/doc/giscoR.Rmd | 16 giscoR-0.3.1/giscoR/inst/doc/giscoR.html | 330 +++--- giscoR-0.3.1/giscoR/man/figures/logo.png |binary giscoR-0.3.1/giscoR/man/giscoR-package.Rd | 2 giscoR-0.3.1/giscoR/man/gisco_attributions.Rd | 4 giscoR-0.3.1/giscoR/man/gisco_bulk_download.Rd | 5 giscoR-0.3.1/giscoR/man/gisco_check_access.Rd | 2 giscoR-0.3.1/giscoR/man/gisco_clear_cache.Rd | 13 giscoR-0.3.1/giscoR/man/gisco_coastallines.Rd | 6 giscoR-0.3.1/giscoR/man/gisco_countries.Rd | 6 giscoR-0.3.1/giscoR/man/gisco_countrycode.Rd | 6 giscoR-0.3.1/giscoR/man/gisco_db.Rd | 1 giscoR-0.3.1/giscoR/man/gisco_get.Rd | 6 giscoR-0.3.1/giscoR/man/gisco_get_airports.Rd | 115 +- giscoR-0.3.1/giscoR/man/gisco_get_coastallines.Rd | 1 giscoR-0.3.1/giscoR/man/gisco_get_grid.Rd | 7 giscoR-0.3.1/giscoR/man/gisco_get_healthcare.Rd | 43 giscoR-0.3.1/giscoR/man/gisco_get_lau.Rd | 38 giscoR-0.3.1/giscoR/man/gisco_get_nuts.Rd | 1 giscoR-0.3.1/giscoR/man/gisco_get_postalcodes.Rd |only giscoR-0.3.1/giscoR/man/gisco_get_units.Rd | 75 - giscoR-0.3.1/giscoR/man/gisco_get_urban_audit.Rd | 16 giscoR-0.3.1/giscoR/man/gisco_nuts.Rd | 6 giscoR-0.3.1/giscoR/man/tgs00026.Rd | 7 giscoR-0.3.1/giscoR/tests/testthat/_snaps |only giscoR-0.3.1/giscoR/tests/testthat/test-gisco_attributions.R | 23 giscoR-0.3.1/giscoR/tests/testthat/test-gisco_bulk_download.R | 12 giscoR-0.3.1/giscoR/tests/testthat/test-gisco_cache.R |only giscoR-0.3.1/giscoR/tests/testthat/test-gisco_get_airports.R | 49 - giscoR-0.3.1/giscoR/tests/testthat/test-gisco_get_coastallines.R | 16 giscoR-0.3.1/giscoR/tests/testthat/test-gisco_get_communes.R | 34 giscoR-0.3.1/giscoR/tests/testthat/test-gisco_get_countries.R | 9 giscoR-0.3.1/giscoR/tests/testthat/test-gisco_get_grid.R | 9 giscoR-0.3.1/giscoR/tests/testthat/test-gisco_get_healthcare.R | 8 giscoR-0.3.1/giscoR/tests/testthat/test-gisco_get_lau.R | 28 giscoR-0.3.1/giscoR/tests/testthat/test-gisco_get_nuts.R | 8 giscoR-0.3.1/giscoR/tests/testthat/test-gisco_get_postalcodes.R |only giscoR-0.3.1/giscoR/tests/testthat/test-gisco_get_units.R | 121 ++ giscoR-0.3.1/giscoR/tests/testthat/test-gisco_get_urbanaudit.R | 53 - giscoR-0.3.1/giscoR/tests/testthat/test-utils.R |only giscoR-0.3.1/giscoR/vignettes/africa.png |only giscoR-0.3.1/giscoR/vignettes/asia.png |only giscoR-0.3.1/giscoR/vignettes/giscoR.Rmd | 16 75 files changed, 1907 insertions(+), 1264 deletions(-)
Title: Alternating Optimization
Description: Alternating optimization of (high-dimensional) functions is an
iterative procedure for minimizing (or maximizing) jointly over all
parameters by alternately optimizing for parameter subsets. For a reference,
see Bezdek and Hathaway (2002) "Some Notes on Alternating Optimization"
<doi:10.1007/3-540-45631-7_39>.
Author: Lennart Oelschläger [aut, cre]
(<https://orcid.org/0000-0001-5421-9313>)
Maintainer: Lennart Oelschläger <lennart.oelschlaeger@uni-bielefeld.de>
Diff between ao versions 0.1.3 dated 2021-08-12 and 0.1.4 dated 2021-10-06
DESCRIPTION | 20 ++++++++++++++------ MD5 | 22 ++++++++++++---------- NAMESPACE | 10 +++++----- NEWS.md | 4 ++++ R/ao.R | 2 +- R/print.ao.R | 10 ++++++---- R/zzz.R | 7 ++++--- README.md | 5 ++++- man/ao.Rd | 2 +- man/figures/logo.png |binary man/print.ao.Rd | 32 ++++++++++++++++---------------- tests |only 12 files changed, 67 insertions(+), 47 deletions(-)
Title: Validate Data in a Database using 'validate'
Description: Check whether records in a database table are valid using
validation rules in R syntax specified with R package 'validate'.
R validation checks are automatically translated to SQL using 'dbplyr'.
Author: Edwin de Jonge [aut, cre] (<https://orcid.org/0000-0002-6580-4718>)
Maintainer: Edwin de Jonge <edwindjonge@gmail.com>
Diff between validatedb versions 0.1.3 dated 2021-03-18 and 0.1.4 dated 2021-10-06
validatedb-0.1.3/validatedb/man/as.data.frame-tbl_validation-method.Rd |only validatedb-0.1.4/validatedb/DESCRIPTION | 18 +---- validatedb-0.1.4/validatedb/MD5 | 22 +++--- validatedb-0.1.4/validatedb/NAMESPACE | 2 validatedb-0.1.4/validatedb/R/as-data-frame.R | 13 +-- validatedb-0.1.4/validatedb/R/tbl_validation.R | 6 + validatedb-0.1.4/validatedb/man/as.data.frame.tbl_validation.Rd |only validatedb-0.1.4/validatedb/man/validatedb-package.Rd | 7 -- validatedb-0.1.4/validatedb/tests/testthat/summary1.rds |binary validatedb-0.1.4/validatedb/tests/testthat/summary1old.rds |only validatedb-0.1.4/validatedb/tests/testthat/summary2.rds |binary validatedb-0.1.4/validatedb/tests/testthat/summary2old.rds |only validatedb-0.1.4/validatedb/tests/testthat/test-as_data_frame.R |only validatedb-0.1.4/validatedb/tests/testthat/test-summary.R | 33 ++++++++-- validatedb-0.1.4/validatedb/tests/testthat/testthat-problems.rds |only 15 files changed, 57 insertions(+), 44 deletions(-)
Title: Mail Sender Using 'Sendgrid' Service
Description: Send email using 'Sendgrid' <https://sendgrid.com/>
mail API(v3) <https://docs.sendgrid.com/api-reference/how-to-use-the-sendgrid-v3-api/authentication>.
Author: Chanyub Park [aut, cre] (<https://orcid.org/0000-0001-6474-2570>)
Maintainer: Chanyub Park <mrchypark@gmail.com>
Diff between sendgridr versions 0.2.4 dated 2021-05-04 and 0.3.3 dated 2021-10-06
sendgridr-0.2.4/sendgridr/man/get_key_id.Rd |only sendgridr-0.3.3/sendgridr/DESCRIPTION | 9 sendgridr-0.3.3/sendgridr/LICENSE | 4 sendgridr-0.3.3/sendgridr/MD5 | 57 +- sendgridr-0.3.3/sendgridr/NAMESPACE | 99 ++--- sendgridr-0.3.3/sendgridr/NEWS.md | 14 sendgridr-0.3.3/sendgridr/R/auth.R | 17 sendgridr-0.3.3/sendgridr/R/helpers.R | 2 sendgridr-0.3.3/sendgridr/R/print.R | 201 +++++----- sendgridr-0.3.3/sendgridr/R/send.R | 57 +- sendgridr-0.3.3/sendgridr/R/sendgridr-package.R | 8 sendgridr-0.3.3/sendgridr/R/set_mail.R | 108 ++++- sendgridr-0.3.3/sendgridr/R/style.R | 220 +++++------ sendgridr-0.3.3/sendgridr/R/utils-pipe.R | 22 - sendgridr-0.3.3/sendgridr/R/utils.R | 2 sendgridr-0.3.3/sendgridr/README.md | 334 +++++++++-------- sendgridr-0.3.3/sendgridr/man/address.Rd | 76 +-- sendgridr-0.3.3/sendgridr/man/attachments.Rd | 54 +- sendgridr-0.3.3/sendgridr/man/auth_check.Rd | 32 - sendgridr-0.3.3/sendgridr/man/auth_set.Rd | 34 - sendgridr-0.3.3/sendgridr/man/body.Rd | 50 +- sendgridr-0.3.3/sendgridr/man/dynamic_template_data.Rd |only sendgridr-0.3.3/sendgridr/man/from.Rd | 50 +- sendgridr-0.3.3/sendgridr/man/mail.Rd | 34 - sendgridr-0.3.3/sendgridr/man/pipe.Rd | 24 - sendgridr-0.3.3/sendgridr/man/send.Rd | 67 +-- sendgridr-0.3.3/sendgridr/man/sendgridr-package.Rd | 51 +- sendgridr-0.3.3/sendgridr/man/subject.Rd | 46 +- sendgridr-0.3.3/sendgridr/man/template_id.Rd |only sendgridr-0.3.3/sendgridr/tests/testthat.R | 8 sendgridr-0.3.3/sendgridr/tests/testthat/test-send.R | 10 31 files changed, 910 insertions(+), 780 deletions(-)
Title: Import an Observable Notebook as HTML Widget
Description: Allows loading and displaying an Observable notebook (online JavaScript
notebooks powered by <https://observablehq.com>) as an HTML Widget in an R
session, 'shiny' application or 'rmarkdown' document.
Author: Julien Barnier [aut, cre],
Kenton Russell [aut]
Maintainer: Julien Barnier <julien.barnier@cnrs.fr>
Diff between robservable versions 0.2.0 dated 2020-09-30 and 0.2.1 dated 2021-10-06
robservable-0.2.0/robservable/inst/htmlwidgets/robservable.yaml |only robservable-0.2.0/robservable/inst/htmlwidgets/runtime |only robservable-0.2.0/robservable/inst/htmlwidgets/utils.js |only robservable-0.2.1/robservable/DESCRIPTION | 13 robservable-0.2.1/robservable/MD5 | 36 robservable-0.2.1/robservable/NEWS.md | 8 robservable-0.2.1/robservable/R/robservable.R | 30 robservable-0.2.1/robservable/README.md | 36 robservable-0.2.1/robservable/build/vignette.rds |binary robservable-0.2.1/robservable/inst/doc/gallery.R | 55 - robservable-0.2.1/robservable/inst/doc/gallery.Rmd | 74 + robservable-0.2.1/robservable/inst/doc/gallery.html | 462 +-------- robservable-0.2.1/robservable/inst/doc/introduction.R | 21 robservable-0.2.1/robservable/inst/doc/introduction.Rmd | 76 + robservable-0.2.1/robservable/inst/doc/introduction.html | 486 ++-------- robservable-0.2.1/robservable/inst/doc/shiny.html | 23 robservable-0.2.1/robservable/inst/htmlwidgets/robservable.js | 282 ----- robservable-0.2.1/robservable/man/robservable.Rd | 20 robservable-0.2.1/robservable/vignettes/gallery.Rmd | 74 + robservable-0.2.1/robservable/vignettes/introduction.Rmd | 76 + 20 files changed, 653 insertions(+), 1119 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-24 0.0.2
2020-02-20 0.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-08-27 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-08-18 1.0.2
2021-04-19 1.0.1
2021-03-18 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-08-30 0.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-07-16 0.1.4
2013-09-27 0.1.3
2013-08-26 0.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-04-14 0.2.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-04-09 0.9.1
2019-05-05 0.8.2
2018-07-13 0.6.4
2017-07-28 0.6.1
2017-02-15 0.5.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-09-13 1.0.5
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-02-17 0.0.3
Title: D3 JavaScript Scatterplot from R
Description: Creates 'D3' 'JavaScript' scatterplots from 'R' with interactive
features : panning, zooming, tooltips, etc.
Author: Julien Barnier [aut, cre],
Kent Russell [aut, ctb],
Mike Bostock [aut, cph] (d3.js library, https://d3js.org),
Susie Lu [aut, cph] (d3-legend library, https://d3-legend.susielu.com/),
Speros Kokenes [aut, cph] (d3-lasso-plugin library,
https://github.com/skokenes/D3-Lasso-Plugin),
Evan Wang [aut, cph] (d3-labeler plugin,
https://github.com/tinker10/D3-Labeler)
Maintainer: Julien Barnier <julien.barnier@cnrs.fr>
Diff between scatterD3 versions 1.0.0 dated 2021-06-24 and 1.0.1 dated 2021-10-06
scatterD3-1.0.0/scatterD3/inst/htmlwidgets/lib |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-arrows.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-axes.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-dims.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-dots.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-ellipses.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-exports.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-labels-lines.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-labels.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-lasso.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-legend.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-lines.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-menu.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-scales.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-utils.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3-zoom.js |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3.css |only scatterD3-1.0.0/scatterD3/inst/htmlwidgets/scatterD3.yaml |only scatterD3-1.0.1/scatterD3/DESCRIPTION | 16 scatterD3-1.0.1/scatterD3/MD5 | 45 scatterD3-1.0.1/scatterD3/NEWS.md | 26 scatterD3-1.0.1/scatterD3/R/scatterD3.R | 24 scatterD3-1.0.1/scatterD3/README.md | 59 scatterD3-1.0.1/scatterD3/build/vignette.rds |binary scatterD3-1.0.1/scatterD3/inst/doc/introduction.R | 2 scatterD3-1.0.1/scatterD3/inst/doc/introduction.Rmd | 6 scatterD3-1.0.1/scatterD3/inst/doc/introduction.html | 3651 ---------- scatterD3-1.0.1/scatterD3/inst/htmlwidgets/scatterD3.js | 550 - scatterD3-1.0.1/scatterD3/vignettes/introduction.Rmd | 6 29 files changed, 197 insertions(+), 4188 deletions(-)
Title: Robust Linear Mixed Effects Models
Description: A method to fit linear mixed effects models robustly.
Robustness is achieved by modification of the scoring equations
combined with the Design Adaptive Scale approach.
Author: Manuel Koller
Maintainer: Manuel Koller <koller.manuel@gmail.com>
Diff between robustlmm versions 2.4-4 dated 2021-05-24 and 2.4-5 dated 2021-10-06
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- build/vignette.rds |binary inst/doc/rlmer.pdf |binary src/Makevars | 2 +- src/Makevars.win | 2 +- src/fastGHQuad.cpp | 10 +++++++--- tests/getME.Rout.save | 14 ++++++++------ 8 files changed, 28 insertions(+), 22 deletions(-)
Title: Identify Mutually Exclusive Mutations
Description: An optimized method for identifying mutually
exclusive genomic events. Its main contribution is a
statistical analysis based on the Poisson-Binomial
distribution that takes into account that some samples
are more mutated than others. See [Canisius, Sander, John WM Martens,
and Lodewyk FA Wessels. (2016) "A novel independence test for
somatic alterations in cancer shows that
biology drives mutual exclusivity but chance explains
most co-occurrence." Genome biology 17.1 : 1-17. <doi:10.1186/s13059-016-1114-x>].
The mutations matrices are sparse matrices. The method developed takes
advantage of the advantages of this type of matrix to save
time and computing resources.
Author: Juan A. Ferrer-Bonsoms Developer [aut, cre],
Laura Jareno Developer [aut],
Angel Rubio User [aut, ctb]
Maintainer: Juan A. Ferrer-Bonsoms Developer <jafhernandez@tecnun.es>
Diff between Rediscover versions 0.2.0 dated 2021-07-08 and 0.3.0 dated 2021-10-06
Rediscover-0.2.0/Rediscover/data/PM_TCGA_COAD_AMP.rda |only Rediscover-0.2.0/Rediscover/data/TCGA_COAD_AMP.rda |only Rediscover-0.2.0/Rediscover/man/PM_TCGA_COAD_AMP.Rd |only Rediscover-0.2.0/Rediscover/man/TCGA_COAD_AMP.Rd |only Rediscover-0.3.0/Rediscover/DESCRIPTION | 11 Rediscover-0.3.0/Rediscover/MD5 | 44 - Rediscover-0.3.0/Rediscover/NAMESPACE | 4 Rediscover-0.3.0/Rediscover/NEWS | 2 Rediscover-0.3.0/Rediscover/R/AuxFunctions.R | 31 Rediscover-0.3.0/Rediscover/R/PMatrixClass.R | 57 + Rediscover-0.3.0/Rediscover/R/getMutex.R | 367 +++++++++- Rediscover-0.3.0/Rediscover/R/getMutexAB.R | 358 ++++++++- Rediscover-0.3.0/Rediscover/R/getMutexGroup.R | 7 Rediscover-0.3.0/Rediscover/data/AMP_COAD.rda |binary Rediscover-0.3.0/Rediscover/data/PM_AMP_COAD.rda |binary Rediscover-0.3.0/Rediscover/data/PM_COAD.rda |binary Rediscover-0.3.0/Rediscover/inst/doc/Rediscover.R | 38 - Rediscover-0.3.0/Rediscover/inst/doc/Rediscover.Rmd | 44 - Rediscover-0.3.0/Rediscover/inst/doc/Rediscover.html | 147 ++-- Rediscover-0.3.0/Rediscover/inst/unitTests/test_getMutexGroup.R | 2 Rediscover-0.3.0/Rediscover/man/AMP_COAD.Rd | 2 Rediscover-0.3.0/Rediscover/man/InternalFunctions.Rd | 6 Rediscover-0.3.0/Rediscover/man/PM_AMP_COAD.Rd | 2 Rediscover-0.3.0/Rediscover/man/getMutexAB.Rd | 12 Rediscover-0.3.0/Rediscover/vignettes/Rediscover.Rmd | 44 - 25 files changed, 950 insertions(+), 228 deletions(-)
Title: Test Set for Differential Equations
Description: Solvers and test set for stiff and non-stiff differential equations, and
differential algebraic equations.
See Mazzia, F., Cash, J.R., and K. Soetaert (2012) <DOI:10.1016/j.cam.2012.03.014>.
Author: Karline Soetaert [aut, cre],
Jeff Cash [aut],
Francesca Mazzia [aut],
Ernst Hairer [ctb] (files dopri8.f, dopri6.f),
Gerard Wanner [ctb] (files dopri8.f, dopri6.f),
T. Abdulla [ctb] (file mebdfi.f),
Cecilia Magherini [ctb] (files bimd.f, bimda.f),
Luigi Brugnano [ctb] (files bimd.f, bimda.f),
Cleve Moler [ctb] (file bimda.f)
Maintainer: Karline Soetaert <karline.soetaert@nioz.nl>
Diff between deTestSet versions 1.1.7.2 dated 2020-06-26 and 1.1.7.3 dated 2021-10-06
DESCRIPTION | 7 +++---- MD5 | 46 +++++++++++++++++++++++----------------------- man/ex_E5.Rd | 3 +-- man/ex_andrews.Rd | 2 +- man/ex_beam.Rd | 3 +-- man/ex_caraxis.Rd | 4 +--- man/ex_crank.Rd | 2 +- man/ex_emep.Rd | 2 +- man/ex_fekete.Rd | 2 +- man/ex_hires.Rd | 2 +- man/ex_nand.Rd | 3 +-- man/ex_orego.Rd | 3 +-- man/ex_pleiades.Rd | 3 +-- man/ex_pollution.Rd | 2 +- man/ex_reference.Rd | 2 +- man/ex_ring.Rd | 2 +- man/ex_rober.Rd | 3 +-- man/ex_transistor.Rd | 3 +-- man/ex_tube.Rd | 3 +-- man/ex_twobit.Rd | 3 +-- man/ex_vdpol.Rd | 3 +-- man/ex_wheelset.Rd | 2 +- src/de_utils.c | 3 +-- src/forcings.c | 3 +-- 24 files changed, 48 insertions(+), 63 deletions(-)
Title: Solvers for Boundary Value Problems of Differential Equations
Description: Functions that solve boundary value problems ('BVP') of systems of ordinary
differential equations ('ODE') and differential algebraic equations ('DAE').
The functions provide an interface to the FORTRAN functions
'twpbvpC', 'colnew/colsys', and an R-implementation of the shooting method.
Mazzia, F., J.R. Cash and K. Soetaert, 2014.
Author: Karline Soetaert [aut, cre] (<https://orcid.org/0000-0003-4603-7100>),
Jeff Cash [aut],
Francesca Mazzia [aut],
Uri M. Ascher [ctb] (files colsysR.f, colnewR.f, coldaeR.f),
G. Bader [ctb] (file colnewR.f),
J. Christiansen [ctb] (file colsysR.f),
Robert R. Russell [ctb] (file colsysR.f)
Maintainer: Karline Soetaert <karline.soetaert@nioz.nl>
Diff between bvpSolve versions 1.4.2 dated 2021-05-19 and 1.4.3 dated 2021-10-06
DESCRIPTION | 6 +++--- MD5 | 14 +++++++------- inst/CITATION | 4 ++-- inst/doc/bvpSolve.pdf |binary inst/doc/bvpTests.pdf |binary inst/doc/opuscula_math_3424.pdf |binary src/bvpSolve_utils.c | 3 +-- src/forcings.c | 3 +-- 8 files changed, 14 insertions(+), 16 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-07 1.2.7
2019-03-10 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-10-07 0.1.6
2016-08-03 0.1.5
2016-06-05 0.1.4
2016-04-07 0.1.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-13 1.0.3
2020-01-15 1.0.2
2019-06-12 1.0.1
2018-11-27 1.0.0
2018-11-02 0.3.1
2018-10-05 0.3.0
2018-09-17 0.2.0
2018-04-20 0.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-05-15 2.0.9
2020-05-12 2.0.8
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-05-30 0.3.3
2020-05-15 0.3.1.1
2020-03-09 0.3.1
2019-08-26 0.3.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-05-24 0.1.6
2020-02-26 0.1.5
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-03-01 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-02-19 2.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-11-24 0.1.1
2020-09-29 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-10-14 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-23 1.0.1
2019-12-15 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-02-08 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-09-14 1.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-08-19 0.1.3
2019-07-15 0.1.2
2018-11-02 0.1.1
2018-10-28 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-01-19 1.2.1
2016-01-06 1.1
2014-05-13 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-02-28 0.1.1
2019-08-08 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-08-10 0.1.4
2016-06-13 0.1.2
2016-06-06 0.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-08-20 0.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-29 0.2.4
2020-03-19 0.2.3
2020-02-26 0.2.2
2019-05-14 0.2.1
2019-05-02 0.2.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-09-04 0.1.1
2021-08-10 0.1.0
Title: Spherical Principal Curves
Description: Fitting dimension reduction methods to data lying on two-dimensional sphere.
This package provides principal circle, principal geodesic analysis, Hauberg's principal curves,
and spherical principal curves. Moreover, it offers the method of locally
defined principal geodesics which is underway.The detailed procedures
are described in Lee, J., Kim, J.-H. and Oh, H.-S. (2021) <doi:10.1109/TPAMI.2020.3025327>.
Also see Kim, J.-H., Lee, J. and Oh, H.-S. (2020) <arXiv:2003.02578>.
Author: Jongmin Lee [aut, cre],
Jang-Hyun Kim [ctb],
Hee-Seok Oh [aut]
Maintainer: Jongmin Lee <jongminlee9218@gmail.com>
Diff between spherepc versions 0.1.4 dated 2020-03-30 and 0.1.5 dated 2021-10-06
DESCRIPTION | 17 MD5 | 36 - R/spherepc.R | 1163 ++++++++++++++++++++++++------------------------- man/Crossprod.Rd | 4 man/Dist.pt.Rd | 2 man/Earthquake.Rd | 7 man/Expmap.Rd | 4 man/ExtrinsicMean.Rd | 9 man/GenerateCircle.Rd | 10 man/IntrinsicMean.Rd | 5 man/LPG.Rd | 274 +++++------ man/Logmap.Rd | 2 man/PGA.Rd | 12 man/PrincipalCircle.Rd | 17 man/Proj.Hauberg.Rd | 2 man/Rotate.Rd | 10 man/Rotate.inv.Rd | 10 man/SPC.Hauberg.Rd | 52 +- man/SPC.Rd | 58 +- 19 files changed, 869 insertions(+), 825 deletions(-)
Title: Treatment Allocation in Clinical Trials by the Maximal Procedure
Description: Performs treatment allocation in two-arm clinical trials by the maximal procedure described by Berger et al. (2003) <doi:10.1002/sim.1538>. To that end, the algorithm provided by Salama et al. (2008) <doi:10.1002/sim.3014> is implemented.
Author: Ignacio López-de-Ullibarri [aut, cre]
Maintainer: Ignacio López-de-Ullibarri <ignacio.lopezdeullibarri@udc.es>
Diff between MPBoost versions 0.1-3 dated 2019-10-06 and 0.1-4 dated 2021-10-06
ChangeLog | 9 ++++++--- DESCRIPTION | 8 ++++---- MD5 | 20 ++++++++++---------- build/partial.rdb |binary build/vignette.rds |binary inst/doc/mpboost.R | 14 +++++++------- inst/doc/mpboost.Rmd | 2 +- inst/doc/mpboost.pdf |binary man/MPBoost-package.Rd | 4 ++-- man/mpboost.Rd | 4 ++-- vignettes/mpboost.Rmd | 2 +- 11 files changed, 33 insertions(+), 30 deletions(-)
Title: Bayesian Global Vector Autoregressions
Description: Estimation of Bayesian Global Vector Autoregressions (BGVAR) with different prior setups and the possibility to introduce stochastic volatility. Built-in priors include the Minnesota, the stochastic search variable selection and Normal-Gamma (NG) prior. For a reference see also Crespo Cuaresma, J., Feldkircher, M. and F. Huber (2016) "Forecasting with Global Vector Autoregressive Models: a Bayesian Approach", Journal of Applied Econometrics, Vol. 31(7), pp. 1371-1391 <doi:10.1002/jae.2504>. Post-processing functions allow for doing predictions, structurally identify the model with short-run or sign-restrictions and compute impulse response functions, historical decompositions and forecast error variance decompositions. Plotting functions are also available.
Author: Maximilian Boeck [aut, cre] (<https://orcid.org/0000-0001-6024-8305>),
Martin Feldkircher [aut] (<https://orcid.org/0000-0002-5511-9215>),
Florian Huber [aut] (<https://orcid.org/0000-0002-2896-7921>),
Darjus Hosszejni [ctb] (<https://orcid.org/0000-0002-3803-691X>)
Maintainer: Maximilian Boeck <maximilian.boeck@wu.ac.at>
Diff between BGVAR versions 2.3.1 dated 2021-09-10 and 2.4.0 dated 2021-10-06
BGVAR-2.3.1/BGVAR/data/eerDatasmall.rda |only BGVAR-2.3.1/BGVAR/data/eerDataspf.rda |only BGVAR-2.3.1/BGVAR/man/eerDatasmall.Rd |only BGVAR-2.3.1/BGVAR/man/eerDataspf.Rd |only BGVAR-2.4.0/BGVAR/DESCRIPTION | 6 BGVAR-2.4.0/BGVAR/MD5 | 88 +- BGVAR-2.4.0/BGVAR/NEWS | 6 BGVAR-2.4.0/BGVAR/R/BGVAR.R | 90 +- BGVAR-2.4.0/BGVAR/R/RcppExports.R | 4 BGVAR-2.4.0/BGVAR/R/bgvar-package.R | 54 - BGVAR-2.4.0/BGVAR/R/fevd.R | 12 BGVAR-2.4.0/BGVAR/R/hd.R | 6 BGVAR-2.4.0/BGVAR/R/helpers.R | 12 BGVAR-2.4.0/BGVAR/R/irf.R | 61 + BGVAR-2.4.0/BGVAR/R/plot.R | 40 - BGVAR-2.4.0/BGVAR/R/predict.R | 151 ---- BGVAR-2.4.0/BGVAR/R/utils.R | 96 +- BGVAR-2.4.0/BGVAR/data/eerData.rda |binary BGVAR-2.4.0/BGVAR/data/pesaranData.rda |binary BGVAR-2.4.0/BGVAR/data/testdata.rda |only BGVAR-2.4.0/BGVAR/inst/doc/examples.R | 64 + BGVAR-2.4.0/BGVAR/inst/doc/examples.Rmd | 78 +- BGVAR-2.4.0/BGVAR/inst/doc/examples.html | 734 ++++++++++----------- BGVAR-2.4.0/BGVAR/inst/include/BGVAR_RcppExports.h | 8 BGVAR-2.4.0/BGVAR/man/avg.pair.cc.Rd | 4 BGVAR-2.4.0/BGVAR/man/bgvar.Rd | 6 BGVAR-2.4.0/BGVAR/man/coef.Rd | 4 BGVAR-2.4.0/BGVAR/man/conv.diag.Rd | 4 BGVAR-2.4.0/BGVAR/man/dic.Rd | 4 BGVAR-2.4.0/BGVAR/man/eerData.Rd | 6 BGVAR-2.4.0/BGVAR/man/fevd.Rd | 8 BGVAR-2.4.0/BGVAR/man/fitted.Rd | 4 BGVAR-2.4.0/BGVAR/man/gfevd.Rd | 4 BGVAR-2.4.0/BGVAR/man/hd.Rd | 6 BGVAR-2.4.0/BGVAR/man/irf.Rd | 34 BGVAR-2.4.0/BGVAR/man/logLik.Rd | 4 BGVAR-2.4.0/BGVAR/man/lps.Rd | 4 BGVAR-2.4.0/BGVAR/man/pesaranData.Rd | 16 BGVAR-2.4.0/BGVAR/man/plot.Rd | 6 BGVAR-2.4.0/BGVAR/man/predict.Rd | 4 BGVAR-2.4.0/BGVAR/man/resid.corr.test.Rd | 4 BGVAR-2.4.0/BGVAR/man/residuals.Rd | 4 BGVAR-2.4.0/BGVAR/man/rmse.Rd | 4 BGVAR-2.4.0/BGVAR/man/testdata.Rd |only BGVAR-2.4.0/BGVAR/man/vcov.Rd | 4 BGVAR-2.4.0/BGVAR/src/BVAR_linear.cpp | 55 + BGVAR-2.4.0/BGVAR/src/RcppExports.cpp | 15 BGVAR-2.4.0/BGVAR/vignettes/examples.Rmd | 78 +- 48 files changed, 893 insertions(+), 899 deletions(-)
Title: R MPFR - Multiple Precision Floating-Point Reliable
Description: Arithmetic (via S4 classes and methods) for
arbitrary precision floating point numbers, including transcendental
("special") functions. To this end, the package interfaces to
the 'LGPL' licensed 'MPFR' (Multiple Precision Floating-Point Reliable) Library
which itself is based on the 'GMP' (GNU Multiple Precision) Library.
Author: Martin Maechler [aut, cre] (<https://orcid.org/0000-0002-8685-9910>),
Richard M. Heiberger [ctb] (formatHex(), *Bin, *Dec),
John C. Nash [ctb] (hjkMpfr(), origin of unirootR()),
Hans W. Borchers [ctb] (optimizeR(*, "GoldenRatio"); origin of
hjkMpfr())
Maintainer: Martin Maechler <maechler@stat.math.ethz.ch>
Diff between Rmpfr versions 0.8-4 dated 2021-04-11 and 0.8-5 dated 2021-10-06
DESCRIPTION | 10 +- MD5 | 45 +++++----- NAMESPACE | 3 R/as.R | 11 ++ R/formatHex.R | 11 ++ R/mpfr.R | 17 +++ R/special-fun.R | 39 ++++++++- TODO | 3 build/partial.rdb |binary build/vignette.rds |binary configure | 15 +++ configure.ac | 9 -- inst/NEWS.Rd | 29 ++++++ inst/doc/Maechler_useR_2011-abstr.pdf |binary inst/doc/Rmpfr-pkg.pdf |binary inst/doc/log1mexp-note.pdf |binary man/distr-etc.Rd | 5 - man/fr_ld_expMpfr.Rd |only man/mpfr-utils.Rd | 6 - src/Rmpfr_utils.h | 13 ++- src/convert.c | 147 ++++++++++++++++++++++++++++++---- src/init.c | 2 tests/special-fun-ex.R | 41 +++++++-- tests/tstHexBin.R | 32 +++++-- 24 files changed, 360 insertions(+), 78 deletions(-)
Title: Plots of the Empirical Attainment Function
Description: Computation and visualization of the empirical attainment function (EAF) for the analysis of random sets in multi-criterion optimization. M. López-Ibáñez, L. Paquete, and T. Stützle (2010) <doi:10.1007/978-3-642-02538-9_9>.
Author: Manuel López-Ibáñez [aut, cre]
(<https://orcid.org/0000-0001-9974-1295>),
Marco Chiarandini [aut],
Carlos Fonseca [aut],
Luís Paquete [aut],
Thomas Stützle [aut],
Mickaël Binois [ctb]
Maintainer: Manuel López-Ibáñez <manuel.lopez-ibanez@manchester.ac.uk>
Diff between eaf versions 2.1 dated 2021-05-07 and 2.2 dated 2021-10-06
eaf-2.1/eaf/tests/lin.S-sph.S-diff.txt |only eaf-2.2/eaf/DESCRIPTION | 8 +++--- eaf-2.2/eaf/MD5 | 31 ++++++++++++----------- eaf-2.2/eaf/NEWS.md | 5 +++ eaf-2.2/eaf/R/eaf.R | 40 +++++++++++++++++++++--------- eaf-2.2/eaf/README.md | 14 ++++++---- eaf-2.2/eaf/build/partial.rdb |binary eaf-2.2/eaf/configure | 18 ++++++------- eaf-2.2/eaf/configure.ac | 5 ++- eaf-2.2/eaf/man/eafdiffplot.Rd | 11 ++++++-- eaf-2.2/eaf/man/eafplot.Rd | 4 +-- eaf-2.2/eaf/src/Makevars.ucrt |only eaf-2.2/eaf/src/Makevars.win | 14 ++++++---- eaf-2.2/eaf/src/mo-tools/svn_version | 2 - eaf-2.2/eaf/src/mo-tools/whv_hype.c | 1 eaf-2.2/eaf/tests/lin-sph.R | 2 - eaf-2.2/eaf/tests/lin.S-sph.S-diff.txt.xz |only eaf-2.2/eaf/tools/winlibs.R | 8 +++--- 18 files changed, 100 insertions(+), 63 deletions(-)
Title: Compositional Data Analysis
Description: Regression, classification, contour plots, hypothesis testing and fitting of distributions for compositional data are some of the functions included.
The standard textbook for such data is John Aitchison's (1986) "The statistical analysis of compositional data". Relevant papers include:
a) Tsagris M.T., Preston S. and Wood A.T.A. (2011). A data-based power transformation for compositional data. Fourth International International Workshop on Compositional Data Analysis.
b) Tsagris M. (2014). The k-NN algorithm for compositional data: a revised approach with and without zero values present. Journal of Data Science, 12(3):519--534.
c) Tsagris M. (2015). A novel, divergence based, regression for compositional data. Proceedings of the 28th Panhellenic Statistics Conference, 15-18 April 2015, Athens, Greece, 430--444.
d) Tsagris M. (2015). Regression analysis with compositional data containing zero values. Chilean Journal of Statistics, 6(2):47--57.
e) Tsagris M., Preston S. and Wood A.T.A. (2016). Improved supervised classification for compositional data using the alpha-transformation. Journal of Classification, 33(2):243--261. <doi:10.1007/s00357-016-9207-5>.
f) Tsagris M., Preston S. and Wood A.T.A. (2017). Nonparametric hypothesis testing for equality of means on the simplex. Journal of Statistical Computation and Simulation, 87(2): 406--422. <doi:10.1080/00949655.2016.1216554>.
g) Tsagris M. and Stewart C. (2018). A Dirichlet regression model for compositional data with zeros. Lobachevskii Journal of Mathematics,39(3): 398--412. <doi:10.1134/S1995080218030198>.
h) Alenazi A. (2019). Regression for compositional data with compositional data as predictor variables with or without zero values. Journal of Data Science, 17(1): 219--238. <doi:10.6339/JDS.201901_17(1).0010>.
i) Tsagris M. and Stewart C. (2020). A folded model for compositional data analysis. Australian and New Zealand Journal of Statistics, 62(2):249--277. <doi:10.1111/anzs.12289>.
j) Tsagris M., Alenazi A. and Stewart C. (2021). Non-parametric regression models for compositional data. <arXiv:2002.05137>.
We further include functions for percentages (or proportions).
Author: Michail Tsagris [aut, cre],
Giorgos Athineou [aut],
Abdulaziz Alenazi [ctb]
Maintainer: Michail Tsagris <mtsagris@uoc.gr>
Diff between Compositional versions 4.9 dated 2021-09-02 and 5.0 dated 2021-10-06
DESCRIPTION | 8 ++--- MD5 | 60 +++++++++++++++++++++++++++---------------- NAMESPACE | 8 ++--- R/alfa.mds.R |only R/esov.mds.R |only R/hd.meantest2.R |only R/ice.pprcomp.R |only R/js.compreg.R | 20 ++++++++++---- R/kl.compreg.R | 13 +++++++-- R/lc.glm.R |only R/lc.reg.R | 12 ++++---- R/ols.compreg.R | 17 ++++++++++-- R/pprcomp.R |only R/pprcomp.tune.R |only R/symkl.compreg.R | 22 +++++++++++---- R/ulc.glm.R |only R/ulc.reg.R | 10 +++---- R/ulc.reg2.R | 4 +- man/Compositional-package.Rd | 4 +- man/alfa.mds.Rd |only man/comp.ppr.Rd | 19 +++++-------- man/comp.test.Rd | 26 ++++++++++-------- man/compppr.tune.Rd | 5 +-- man/esov.mds.Rd |only man/hd.meantest2.Rd |only man/hotel2T2.Rd | 2 - man/ice.pprcomp.Rd |only man/james.Rd | 10 +++---- man/kl.compreg.Rd | 10 +++---- man/lc.glm.Rd |only man/lc.reg.Rd | 2 - man/lc.reg2.Rd | 2 - man/pcc.Rd | 2 - man/pprcomp.Rd |only man/pprcomp.tune.Rd |only man/tflr.Rd | 5 ++- man/ulc.glm.Rd |only man/ulc.reg.Rd | 10 +++++-- man/ulc.reg2.Rd | 12 +++++--- 39 files changed, 172 insertions(+), 111 deletions(-)
Title: Wizardry Code Offensive Programming Test Generation
Description: Allows to generate automatically 'testthat' code files from offensive
programming test cases. Generated test files are complete and ready to run.
Using 'wyz.code.testthat' you will earn a lot of time, reduce the number of
errors in test case production, be able to test immediately generated files
without any need to view or modify them, and enter a zero time latency between
code implementation and industrial testing. As with 'testthat', you may
complete provided test cases according to your needs to push testing further,
but this need is nearly void when using 'wyz.code.offensiveProgramming'.
Author: Fabien Gelineau <neonira@gmail.com>
Maintainer: Fabien Gelineau <neonira@gmail.com>
Diff between wyz.code.testthat versions 1.1.17 dated 2020-04-22 and 1.1.20 dated 2021-10-06
wyz.code.testthat-1.1.17/wyz.code.testthat/vignettes/vignette-common.R |only wyz.code.testthat-1.1.20/wyz.code.testthat/DESCRIPTION | 15 - wyz.code.testthat-1.1.20/wyz.code.testthat/MD5 | 21 +- wyz.code.testthat-1.1.20/wyz.code.testthat/NAMESPACE | 1 wyz.code.testthat-1.1.20/wyz.code.testthat/build/partial.rdb |binary wyz.code.testthat-1.1.20/wyz.code.testthat/build/vignette.rds |binary wyz.code.testthat-1.1.20/wyz.code.testthat/inst/doc/release-notes.R | 2 wyz.code.testthat-1.1.20/wyz.code.testthat/inst/doc/release-notes.Rmd | 31 ++- wyz.code.testthat-1.1.20/wyz.code.testthat/inst/doc/release-notes.html | 103 +++++++++- wyz.code.testthat-1.1.20/wyz.code.testthat/inst/extdata |only wyz.code.testthat-1.1.20/wyz.code.testthat/vignettes/common-style.R |only wyz.code.testthat-1.1.20/wyz.code.testthat/vignettes/release-notes.Rmd | 31 ++- wyz.code.testthat-1.1.20/wyz.code.testthat/vignettes/style.css | 8 13 files changed, 188 insertions(+), 24 deletions(-)
More information about wyz.code.testthat at CRAN
Permanent link
Title: Wizardry Code Offensive Programming R Documentation
Description: Allows to generate on-demand or by batch, any R documentation file,
whatever is kind, data, function, class or package. It populates
documentation sections, either automatically or by considering
your input. Input code could be standard R code or offensive programming code.
Documentation content completeness depends on the type of code you use. With
offensive programming code, expect generated documentation to be fully
completed, from a format and content point of view. With some standard R
code, you will have to activate post processing to fill-in any section that
requires complements. Produced manual page validity is automatically tested
against R documentation compliance rules. Documentation language
proficiency, wording style, and phrasal adjustments remains your job.
Author: Fabien Gelineau <neonira@gmail.com>
Maintainer: Fabien Gelineau <neonira@gmail.com>
Diff between wyz.code.rdoc versions 1.1.16 dated 2020-04-22 and 1.1.19 dated 2021-10-06
wyz.code.rdoc-1.1.16/wyz.code.rdoc/vignettes/vignette-common.R |only wyz.code.rdoc-1.1.19/wyz.code.rdoc/DESCRIPTION | 14 wyz.code.rdoc-1.1.19/wyz.code.rdoc/MD5 | 47 wyz.code.rdoc-1.1.19/wyz.code.rdoc/build/partial.rdb |binary wyz.code.rdoc-1.1.19/wyz.code.rdoc/build/vignette.rds |binary wyz.code.rdoc-1.1.19/wyz.code.rdoc/inst/doc/documentation.html | 76 wyz.code.rdoc-1.1.19/wyz.code.rdoc/inst/doc/release-notes.R | 2 wyz.code.rdoc-1.1.19/wyz.code.rdoc/inst/doc/release-notes.Rmd | 30 wyz.code.rdoc-1.1.19/wyz.code.rdoc/inst/doc/release-notes.html | 103 wyz.code.rdoc-1.1.19/wyz.code.rdoc/inst/doc/tips-and-tricks.R | 2 wyz.code.rdoc-1.1.19/wyz.code.rdoc/inst/doc/tips-and-tricks.Rmd | 2 wyz.code.rdoc-1.1.19/wyz.code.rdoc/inst/doc/tips-and-tricks.html | 118 wyz.code.rdoc-1.1.19/wyz.code.rdoc/inst/doc/tutorial.R | 2 wyz.code.rdoc-1.1.19/wyz.code.rdoc/inst/doc/tutorial.Rmd | 4 wyz.code.rdoc-1.1.19/wyz.code.rdoc/inst/doc/tutorial.html | 179 - wyz.code.rdoc-1.1.19/wyz.code.rdoc/inst/doc/use-cases.R | 2 wyz.code.rdoc-1.1.19/wyz.code.rdoc/inst/doc/use-cases.Rmd | 4 wyz.code.rdoc-1.1.19/wyz.code.rdoc/inst/doc/use-cases.html | 1754 ++++------ wyz.code.rdoc-1.1.19/wyz.code.rdoc/inst/extdata |only wyz.code.rdoc-1.1.19/wyz.code.rdoc/tests/testthat/test_outOfPackage.R | 2 wyz.code.rdoc-1.1.19/wyz.code.rdoc/vignettes/common-style.R |only wyz.code.rdoc-1.1.19/wyz.code.rdoc/vignettes/release-notes.Rmd | 30 wyz.code.rdoc-1.1.19/wyz.code.rdoc/vignettes/style.css | 8 wyz.code.rdoc-1.1.19/wyz.code.rdoc/vignettes/tips-and-tricks.Rmd | 2 wyz.code.rdoc-1.1.19/wyz.code.rdoc/vignettes/tutorial.Rmd | 4 wyz.code.rdoc-1.1.19/wyz.code.rdoc/vignettes/use-cases.Rmd | 4 26 files changed, 1357 insertions(+), 1032 deletions(-)
Title: Wizardry Code Meta Testing
Description: Meta testing is the ability to test a function without having to
provide its parameter values.
Those values will be generated, based on semantic naming of parameters, as
introduced by package 'wyz.code.offensiveProgramming'.
Value generation logic can be completed with your own data types
and generation schemes. This to meet your most specific requirements and to
answer to a wide variety of usages, from general use case to very specific
ones.
While using meta testing, it becomes easier to generate stress test
campaigns, non-regression test campaigns and robustness test campaigns, as
generated tests can be saved and reused from session to session.
Main benefits of using 'wyz.code.metaTesting' is ability to discover valid
and invalid function parameter combinations, ability to infer valid
parameter values, and to provide smart summaries that allows you to focus
on dysfunctional cases.
Author: Fabien Gelineau <neonira@gmail.com>
Maintainer: Fabien Gelineau <neonira@gmail.com>
Diff between wyz.code.metaTesting versions 1.1.20 dated 2021-01-07 and 1.1.21 dated 2021-10-06
DESCRIPTION | 13 ++++++------- MD5 | 16 ++++++++-------- NAMESPACE | 1 - build/partial.rdb |binary inst/doc/release-notes.Rmd | 14 ++++++++++++++ inst/doc/release-notes.html | 17 +++++++++++++++++ inst/extdata/project-release.rds |binary tests/testthat/test_DataFactory.R | 4 ++-- vignettes/release-notes.Rmd | 14 ++++++++++++++ 9 files changed, 61 insertions(+), 18 deletions(-)
More information about wyz.code.metaTesting at CRAN
Permanent link
Title: Creation and Evaluation of Acceptance Sampling Plans
Description: Provides functionality for creating and
evaluating acceptance sampling plans. Sampling plans can be single,
double or multiple.
Author: Andreas Kiermeier [aut, cre],
Peter Bloomfield [ctb]
Maintainer: Andreas Kiermeier <Andreas.Kiermeier@gmail.com>
Diff between AcceptanceSampling versions 1.0-6 dated 2019-01-21 and 1.0-7 dated 2021-10-06
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- build/vignette.rds |binary inst/CITATION | 4 ++-- inst/doc/acceptance_sampling_manual.pdf |binary 5 files changed, 10 insertions(+), 10 deletions(-)
More information about AcceptanceSampling at CRAN
Permanent link
Title: Maximum Entropy Bootstrap for Time Series
Description: Maximum entropy density based dependent data bootstrap.
An algorithm is provided to create a population of time series (ensemble)
without assuming stationarity. The reference paper (Vinod, H.D., 2004 <DOI: 10.1016/j.jempfin.2003.06.002>) explains
how the algorithm satisfies the ergodic theorem and the central limit theorem.
Author: Hrishikesh D. Vinod <Vinod@fordham.edu>, Javier
López-de-Lacalle <javlacalle@yahoo.es>, and Fred Viole
Maintainer: Fred Viole <fviole@fordham.edu>
Diff between meboot versions 1.4-9.1 dated 2021-07-10 and 1.4-9.2 dated 2021-10-06
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- inst/CITATION | 4 ++-- inst/doc/meboot.pdf |binary vignettes/meboot.bib | 2 +- 5 files changed, 11 insertions(+), 11 deletions(-)
Title: Markov Chain Monte Carlo (MCMC) Package
Description: Contains functions to perform Bayesian
inference using posterior simulation for a number of
statistical models. Most simulation is done in compiled C++
written in the Scythe Statistical Library Version 1.0.3. All
models return 'coda' mcmc objects that can then be summarized
using the 'coda' package. Some useful
utility functions such as density functions,
pseudo-random number generators for statistical
distributions, a general purpose Metropolis sampling algorithm,
and tools for visualization are provided.
Author: Andrew D. Martin [aut], Kevin M. Quinn [aut], Jong Hee Park [aut,cre], Ghislain Vieilledent [ctb], Michael Malecki[ctb], Matthew Blackwell [ctb], Keith Poole [ctb], Craig Reed [ctb], Ben Goodrich [ctb], Qiushi Yu [ctb], Ross Ihaka [cph], The R Development Core Team [cph], The R Foundation [cph], Pierre L'Ecuyer [cph], Makoto Matsumoto [cph], Takuji Nishimura [cph]
Maintainer: Jong Hee Park <jongheepark@snu.ac.kr>
Diff between MCMCpack versions 1.5-0 dated 2021-01-20 and 1.6-0 dated 2021-10-06
DESCRIPTION | 10 +- MD5 | 152 +++++++++++++++++++++++--------------------- NAMESPACE | 3 R/HDPHMMnegbin.R | 2 R/HDPHMMpoisson.R | 2 R/HDPHSMMnegbin.R | 2 R/HMMpanelFE.R | 4 + R/HMMpanelRE.R | 4 + R/MCMCSVDreg.R | 2 R/MCMCbinaryChange.R | 2 R/MCMCdynamicEI.R | 2 R/MCMCdynamicIRT1d.R | 2 R/MCMCfactanal.R | 2 R/MCMChierEI.R | 2 R/MCMCirt1d.R | 2 R/MCMCirtHier1d.R | 2 R/MCMCirtKd.R | 2 R/MCMCirtKdRob.R | 2 R/MCMClogit.R | 2 R/MCMCmetrop1R.R | 2 R/MCMCmixfactanal.R | 2 R/MCMCmnl.R | 2 R/MCMCnegbin.R | 2 R/MCMCnegbinChange.R | 2 R/MCMCoprobit.R | 2 R/MCMCoprobitChange.R | 2 R/MCMCordfactanal.R | 2 R/MCMCpaircompare.R |only R/MCMCpaircompare2d.R |only R/MCMCpaircompare2dDP.R |only R/MCMCpoisson.R | 2 R/MCMCpoissonChange.R | 2 R/MCMCprobit.R | 2 R/MCMCprobitChange.R | 2 R/MCMCregress.R | 2 R/MCMCregressChange.R | 4 + R/MCMCtobit.R | 2 R/data.R | 30 ++++++++ R/hidden.R | 134 ++++++++++++++++++++++++++++++++++++++ build |only data/Euro2016.rda |only inst/CITATION | 4 - inst/HISTORY.txt | 14 ++++ man/Euro2016.Rd |only man/HDPHMMnegbin.Rd | 2 man/HDPHMMpoisson.Rd | 2 man/HDPHSMMnegbin.Rd | 2 man/HMMpanelFE.Rd | 4 + man/HMMpanelRE.Rd | 4 + man/MCMCSVDreg.Rd | 2 man/MCMCbinaryChange.Rd | 2 man/MCMCdynamicEI.Rd | 2 man/MCMCdynamicIRT1d.Rd | 2 man/MCMCfactanal.Rd | 2 man/MCMChierEI.Rd | 2 man/MCMCirt1d.Rd | 2 man/MCMCirtHier1d.Rd | 2 man/MCMCirtKd.Rd | 2 man/MCMCirtKdRob.Rd | 2 man/MCMClogit.Rd | 2 man/MCMCmetrop1R.Rd | 2 man/MCMCmixfactanal.Rd | 2 man/MCMCmnl.Rd | 2 man/MCMCnegbin.Rd | 2 man/MCMCnegbinChange.Rd | 2 man/MCMCoprobit.Rd | 2 man/MCMCoprobitChange.Rd | 2 man/MCMCordfactanal.Rd | 2 man/MCMCpaircompare.Rd |only man/MCMCpaircompare2d.Rd |only man/MCMCpaircompare2dDP.Rd |only man/MCMCpoisson.Rd | 2 man/MCMCpoissonChange.Rd | 2 man/MCMCprobit.Rd | 2 man/MCMCprobitChange.Rd | 2 man/MCMCregress.Rd | 2 man/MCMCregressChange.Rd | 4 + man/MCMCtobit.Rd | 2 src/MCMCfcds.h | 131 +++++++++++++++++++++++++++++++++++++ src/MCMCpack_init.c | 9 ++ src/cMCMCpaircompare.cc |only src/cMCMCpaircompare2d.cc |only src/cMCMCpaircompare2dDP.cc |only 83 files changed, 490 insertions(+), 133 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-06-21 0.13.0
2020-12-17 0.9.14
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-06-26 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-04-29 0.8-1
2021-04-12 0.8-0
2020-03-09 0.6-1
2019-11-12 0.6-0
2019-01-09 0.5-9
2017-05-14 0.5-8
2016-05-03 0.5-6
2016-01-06 0.5-5
2015-12-24 0.5-4
2015-07-09 0.5-3
2015-05-06 0.5-2
2015-04-23 0.5-1
2015-01-28 0.5-0
2014-12-09 0.4-8
2014-12-01 0.4-7
2014-07-31 0.4-5
2014-05-04 0.4-4
2014-04-02 0.4-3
2014-01-15 0.4-2
2014-01-13 0.4-1
2013-11-15 0.4-0
2013-09-30 0.3-8
2013-07-03 0.3-6
2013-05-16 0.3-5
2013-04-18 0.3-4
2013-03-24 0.3-3
2012-12-05 0.3-2
2012-12-01 0.3-1
2012-09-12 0.2-5
2012-08-21 0.2-4
2012-06-20 0.2-2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-02-09 0.7.0
2015-12-03 0.6-6
2015-12-01 0.6-5
2015-11-28 0.6-4
2015-07-29 0.6-3
2015-06-02 0.6-2
2014-12-01 0.4-1
2014-11-19 0.3-0
2014-08-08 0.1-9
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-03-31 7.0.1
2020-11-24 5.0.3
2020-07-30 5.0.2
2020-05-15 5.0.1
2020-02-05 4.1.5
2019-10-03 4.1.4
2019-09-06 4.1.3
2019-06-06 4.1.1
2019-04-12 4.0.4
2019-04-08 4.0.3
2018-06-28 4.0.2
2018-05-26 4.0.1
2018-03-25 3.0.4
2017-11-22 3.0.3
2017-11-08 3.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-07-20 2.1.1
2021-04-03 2.1.0
2020-07-05 2.0.1
2020-05-04 2.0.0
2019-02-26 1.2.1
2019-02-18 1.2.0
2018-06-20 1.1.1
2018-04-27 1.1.0
2018-02-08 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-04-30 0.1.6
2020-01-13 0.1.5
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-05-27 0.0.11
2021-04-21 0.0.9
2021-01-29 0.0.7
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-04-29 2.2.0
2017-06-23 2.1-0
2016-03-15 2.0-0
2015-10-25 1.0-2
2015-07-31 1.0.1
2015-07-15 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-10-03 0.2.5
2021-09-24 0.2.4
2021-09-22 0.2.3
2019-11-27 0.2.2
2018-08-26 0.2.1
2018-07-23 0.2.0
2017-03-19 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-03-27 1.6.8
2020-10-28 1.6.5
2020-10-22 1.6.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-08-05 0.11-0
2021-05-07 0.10-0
2020-11-04 0.9-0
2020-03-26 0.8
Title: Preprocessing Operators and Pipelines for 'mlr3'
Description: Dataflow programming toolkit that enriches 'mlr3' with a diverse
set of pipelining operators ('PipeOps') that can be composed into graphs.
Operations exist for data preprocessing, model fitting, and ensemble
learning. Graphs can themselves be treated as 'mlr3' 'Learners' and can
therefore be resampled, benchmarked, and tuned.
Author: Martin Binder [aut, cre],
Florian Pfisterer [aut] (<https://orcid.org/0000-0001-8867-762X>),
Lennart Schneider [aut] (<https://orcid.org/0000-0003-4152-5308>),
Bernd Bischl [aut] (<https://orcid.org/0000-0001-6002-6980>),
Michel Lang [aut] (<https://orcid.org/0000-0001-9754-0393>),
Susanne Dandl [aut]
Maintainer: Martin Binder <mlr.developer@mb706.com>
Diff between mlr3pipelines versions 0.3.6 dated 2021-09-07 and 0.3.6-1 dated 2021-10-06
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- NEWS.md | 4 ++++ README.md | 26 +++++++++++++------------- build/partial.rdb |binary tests/testthat/test_pipeop_kernelpca.R | 2 +- 6 files changed, 26 insertions(+), 22 deletions(-)
Title: Mixed GAM Computation Vehicle with Automatic Smoothness
Estimation
Description: Generalized additive (mixed) models, some of their extensions and
other generalized ridge regression with multiple smoothing
parameter estimation by (Restricted) Marginal Likelihood,
Generalized Cross Validation and similar, or using iterated
nested Laplace approximation for fully Bayesian inference. See
Wood (2017) <doi:10.1201/9781315370279> for an overview.
Includes a gam() function, a wide variety of smoothers, 'JAGS'
support and distributions beyond the exponential family.
Author: Simon Wood <simon.wood@r-project.org>
Maintainer: Simon Wood <simon.wood@r-project.org>
Diff between mgcv versions 1.8-37 dated 2021-09-23 and 1.8-38 dated 2021-10-06
ChangeLog | 4 ++++ DESCRIPTION | 6 +++--- MD5 | 18 +++++++++++------- R/smooth.r | 4 +++- build/partial.rdb |binary inst/po/it |only man/random.effects.Rd | 2 +- man/smooth.construct.re.smooth.spec.Rd | 2 ++ po/R-it.po |only po/it.po |only src/mat.c | 5 +++-- 11 files changed, 27 insertions(+), 14 deletions(-)
Title: Tools to Easily Download Data from INSEE BDM Database
Description: Using embedded sdmx queries, get the data of more than 150 000 insee series from bdm database. Have a look at the detailed sdmx web service page with the following link : <https://www.insee.fr/en/information/2868055>.
Author: Hadrien Leclerc [aut, cre],
INSEE [cph]
Maintainer: Hadrien Leclerc <leclerc.hadrien@gmail.com>
Diff between insee versions 1.1.1 dated 2021-09-16 and 1.1.2 dated 2021-10-06
DESCRIPTION | 14 - MD5 | 52 ++--- NAMESPACE | 32 +-- NEWS.md | 4 R/download_idbank_list.R | 9 R/get_dataset_dimension.R | 6 R/get_date.R | 10 - R/get_dimension_values.R | 5 R/get_idbank_list.R | 7 R/read_dataset_metadata.R | 5 build/vignette.rds |binary inst/doc/insee.html | 294 ++++++++++++++----------------- inst/doc/v2_gdp-vignettes.html | 153 ++++++---------- inst/doc/v3_inflation-vignettes.html | 183 ++++++++----------- inst/doc/v4_unem-vignettes.html | 155 ++++++---------- inst/doc/v5_pop-vignettes.html | 171 +++++++----------- inst/doc/v6_pop_map-vignettes.html | 311 +++++++++++++++------------------ inst/doc/v7_death_birth-vignettes.html | 187 ++++++++----------- man/add_insee_metadata.Rd | 58 +++--- man/clean_table.Rd | 56 ++--- man/get_column_title.Rd | 48 ++--- man/get_dataset_list.Rd | 42 ++-- man/get_idbank_list.Rd | 68 +++---- man/get_insee.Rd | 76 ++++---- man/get_last_release.Rd | 40 ++-- man/search_insee.Rd | 74 +++---- tests/testthat/test_all.R | 5 27 files changed, 943 insertions(+), 1122 deletions(-)