Title: Read Stable Isotope Data Files
Description: Interface to the raw data file formats commonly encountered in scientific disciplines that make use of stable isotopes.
Author: Sebastian Kopf [aut, cre] (<https://orcid.org/0000-0002-2044-0201>),
Brett Davidheiser-Kroll [aut] (<https://orcid.org/0000-0002-6153-7851>),
Ilja Kocken [aut] (<https://orcid.org/0000-0003-2196-8718>)
Maintainer: Sebastian Kopf <sebastian.kopf@colorado.edu>
Diff between isoreader versions 1.3.1 dated 2021-10-15 and 1.3.2 dated 2021-11-18
DESCRIPTION | 6 +-- MD5 | 32 ++++++++++---------- R/utils.R | 5 --- README.md | 45 ++++++++++++++--------------- inst/doc/continuous_flow.Rmd | 2 - inst/doc/continuous_flow.html | 10 +++--- inst/doc/development.html | 10 +++--- inst/doc/dual_inlet.Rmd | 2 - inst/doc/dual_inlet.html | 10 +++--- inst/doc/operations.html | 18 +++++------ inst/doc/quick_start.html | 10 +++--- inst/doc/scan.Rmd | 2 - inst/doc/scan.html | 36 +++++++++++------------ tests/testthat/test-file-info-operations.R | 2 - vignettes/continuous_flow.Rmd | 2 - vignettes/dual_inlet.Rmd | 2 - vignettes/scan.Rmd | 2 - 17 files changed, 96 insertions(+), 100 deletions(-)
Title: Arbitrary Dimensional Clifford Algebras
Description: A suite of routines for Clifford algebras, using the
'Map' class of the Standard Template Library. Canonical
reference: Hestenes (1987, ISBN 90-277-1673-0, "Clifford algebra
to geometric calculus"). Special cases including Lorentz transforms,
quaternion multiplication, and Grassman algebra, are discussed.
Conformal geometric algebra theory is implemented.
Author: Robin K. S. Hankin [aut, cre] (<https://orcid.org/0000-0001-5982-0415>)
Maintainer: Robin K. S. Hankin <hankin.robin@gmail.com>
Diff between clifford versions 1.0-2 dated 2020-03-08 and 1.0-5 dated 2021-11-18
clifford-1.0-2/clifford/R/quaternion.R |only clifford-1.0-2/clifford/inst/conformal_algebra.R |only clifford-1.0-2/clifford/inst/linear_algebra.Rmd |only clifford-1.0-2/clifford/inst/lorentz_clifford.Rmd |only clifford-1.0-2/clifford/inst/quaternion_clifford.Rmd |only clifford-1.0-2/clifford/man/Conj.Rd |only clifford-1.0-2/clifford/man/dual.Rd |only clifford-1.0-2/clifford/man/getcoeffs.Rd |only clifford-1.0-2/clifford/man/neg.Rd |only clifford-1.0-2/clifford/man/rev.Rd |only clifford-1.0-5/clifford/DESCRIPTION | 15 - clifford-1.0-5/clifford/MD5 | 98 +++---- clifford-1.0-5/clifford/NAMESPACE | 20 + clifford-1.0-5/clifford/R/RcppExports.R | 8 clifford-1.0-5/clifford/R/cartan.R |only clifford-1.0-5/clifford/R/clifford.R | 247 +++++++++++++------ clifford-1.0-5/clifford/R/clifford_ops.R | 87 ++++-- clifford-1.0-5/clifford/R/extract.R | 23 + clifford-1.0-5/clifford/README.md | 57 +--- clifford-1.0-5/clifford/build/clifford.pdf |only clifford-1.0-5/clifford/build/partial.rdb |binary clifford-1.0-5/clifford/build/vignette.rds |binary clifford-1.0-5/clifford/inst/doc/clifford.R | 34 +- clifford-1.0-5/clifford/inst/doc/clifford.Rnw | 71 +++-- clifford-1.0-5/clifford/inst/doc/clifford.pdf |binary clifford-1.0-5/clifford/inst/doc/hitzer.R |only clifford-1.0-5/clifford/inst/doc/hitzer.Rmd |only clifford-1.0-5/clifford/inst/doc/hitzer.pdf |only clifford-1.0-5/clifford/man/Extract.Rd | 58 +++- clifford-1.0-5/clifford/man/Ops.clifford.Rd | 101 ++++--- clifford-1.0-5/clifford/man/allcliff.Rd | 10 clifford-1.0-5/clifford/man/antivector.Rd | 33 ++ clifford-1.0-5/clifford/man/cartan.Rd |only clifford-1.0-5/clifford/man/clifford.Rd | 16 - clifford-1.0-5/clifford/man/const.Rd |only clifford-1.0-5/clifford/man/drop.Rd | 8 clifford-1.0-5/clifford/man/figures |only clifford-1.0-5/clifford/man/grade.Rd | 116 ++++++-- clifford-1.0-5/clifford/man/homog.Rd | 9 clifford-1.0-5/clifford/man/involution.Rd |only clifford-1.0-5/clifford/man/lowlevel.Rd | 11 clifford-1.0-5/clifford/man/magnitude.Rd | 18 - clifford-1.0-5/clifford/man/minus.Rd |only clifford-1.0-5/clifford/man/numeric_to_clifford.Rd | 15 - clifford-1.0-5/clifford/man/print.Rd | 13 - clifford-1.0-5/clifford/man/quaternion.Rd | 43 +-- clifford-1.0-5/clifford/man/rcliff.Rd | 52 ++-- clifford-1.0-5/clifford/man/signature.Rd | 121 ++++++--- clifford-1.0-5/clifford/man/term.Rd | 31 +- clifford-1.0-5/clifford/src/RcppExports.cpp | 30 ++ clifford-1.0-5/clifford/src/clifford.cpp | 21 + clifford-1.0-5/clifford/src/clifford.h | 117 +++++++-- clifford-1.0-5/clifford/tests/testthat/test_aaa.R | 40 ++- clifford-1.0-5/clifford/tests/testthat/test_aab.R | 54 +++- clifford-1.0-5/clifford/tests/testthat/test_aac.R | 2 clifford-1.0-5/clifford/tests/testthat/test_aad.R | 25 + clifford-1.0-5/clifford/tests/testthat/test_aae.R | 4 clifford-1.0-5/clifford/tests/testthat/test_aaf.R |only clifford-1.0-5/clifford/tests/testthat/test_aag.R |only clifford-1.0-5/clifford/tests/testthat/test_aah.R |only clifford-1.0-5/clifford/vignettes/clifford.Rnw | 71 +++-- clifford-1.0-5/clifford/vignettes/hitzer.Rmd |only 62 files changed, 1143 insertions(+), 536 deletions(-)
Title: Universal Storage Engine for Sparse and Dense Multidimensional
Arrays
Description: The universal storage engine 'TileDB' introduces a
powerful on-disk format for multi-dimensional arrays. It supports
dense and sparse arrays, dataframes and key-values stores, cloud
storage ('S3', 'GCS', 'Azure'), chunked arrays, multiple compression,
encryption and checksum filters, uses a fully multi-threaded
implementation, supports parallel I/O, data versioning ('time
travel'), metadata and groups. It is implemented as an embeddable
cross-platform C++ library with APIs from several languages, and
integrations.
Author: TileDB, Inc. [aut, cph],
Dirk Eddelbuettel [cre]
Maintainer: Dirk Eddelbuettel <dirk@tiledb.com>
Diff between tiledb versions 0.9.7 dated 2021-10-07 and 0.10.0 dated 2021-11-18
tiledb-0.10.0/tiledb/DESCRIPTION | 18 tiledb-0.10.0/tiledb/MD5 | 90 tiledb-0.10.0/tiledb/NAMESPACE | 1 tiledb-0.10.0/tiledb/NEWS.md | 33 tiledb-0.10.0/tiledb/R/Config.R | 6 tiledb-0.10.0/tiledb/R/DenseArray.R | 10 tiledb-0.10.0/tiledb/R/Query.R | 36 tiledb-0.10.0/tiledb/R/RcppExports.R | 44 tiledb-0.10.0/tiledb/R/SparseArray.R | 11 tiledb-0.10.0/tiledb/R/TileDBArray.R | 270 - tiledb-0.10.0/tiledb/build/vignette.rds |binary tiledb-0.10.0/tiledb/configure | 61 tiledb-0.10.0/tiledb/configure.ac | 37 tiledb-0.10.0/tiledb/inst/doc/documentation.R | 34 tiledb-0.10.0/tiledb/inst/doc/documentation.Rmd | 4 tiledb-0.10.0/tiledb/inst/doc/documentation.html | 1905 +++++----- tiledb-0.10.0/tiledb/inst/doc/introduction.html | 236 + tiledb-0.10.0/tiledb/inst/doc/tiledb-mariadb-examples.html | 557 ++ tiledb-0.10.0/tiledb/inst/examples/ex_1.R | 2 tiledb-0.10.0/tiledb/inst/examples/ex_2.R | 8 tiledb-0.10.0/tiledb/inst/examples/quickstart_sparse_timetravel.R | 2 tiledb-0.10.0/tiledb/inst/notebooks/datetimes.Rmd | 2 tiledb-0.10.0/tiledb/inst/notebooks/datetimes.html | 663 +-- tiledb-0.10.0/tiledb/inst/tinytest/test_arrayschema.R | 1 tiledb-0.10.0/tiledb/inst/tinytest/test_dataframe.R | 2 tiledb-0.10.0/tiledb/inst/tinytest/test_densearray.R | 51 tiledb-0.10.0/tiledb/inst/tinytest/test_dimsubset.R | 2 tiledb-0.10.0/tiledb/inst/tinytest/test_domain.R | 8 tiledb-0.10.0/tiledb/inst/tinytest/test_fragmentinfo.R | 3 tiledb-0.10.0/tiledb/inst/tinytest/test_libtiledb.R | 8 tiledb-0.10.0/tiledb/inst/tinytest/test_query.R | 2 tiledb-0.10.0/tiledb/inst/tinytest/test_shmem.R |only tiledb-0.10.0/tiledb/inst/tinytest/test_tiledbarray.R | 92 tiledb-0.10.0/tiledb/inst/tinytest/test_timetravel.R |only tiledb-0.10.0/tiledb/man/tiledb_array-class.Rd | 14 tiledb-0.10.0/tiledb/man/tiledb_array.Rd | 9 tiledb-0.10.0/tiledb/src/Makevars.in | 11 tiledb-0.10.0/tiledb/src/Makevars.ucrt | 1 tiledb-0.10.0/tiledb/src/Makevars.win | 2 tiledb-0.10.0/tiledb/src/RcppExports.cpp | 150 tiledb-0.10.0/tiledb/src/deprecation.cpp | 154 tiledb-0.10.0/tiledb/src/libtiledb.cpp | 33 tiledb-0.10.0/tiledb/src/libtiledb.h | 3 tiledb-0.10.0/tiledb/src/nullable.cpp | 12 tiledb-0.10.0/tiledb/src/shmem.cpp |only tiledb-0.10.0/tiledb/tools/tiledbVersion.txt | 4 tiledb-0.10.0/tiledb/vignettes/documentation.Rmd | 4 tiledb-0.9.7/tiledb/man/tiledb_query_alloc_buffer_ptr_char_subarray.Rd |only 48 files changed, 2543 insertions(+), 2053 deletions(-)
Title: Less Code, More Results
Description: Each function accomplishes the work of several or more standard R functions. For example, two function calls, Read() and CountAll(), read the data and generate summary statistics for all variables in the data frame, plus histograms and bar charts as appropriate. Other functions provide for descriptive statistics, a comprehensive regression analysis, analysis of variance and t-test, plotting including the introduced here Violin/Box/Scatter plot for a numerical variable, bar chart, histogram, box plot, density curves, calibrated power curve, reading multiple data formats with the same function call, variable labels, color themes, Trellis graphics and a built-in help system. Also includes a confirmatory factor analysis of multiple indicator measurement models, pedagogical routines for data simulation such as for the Central Limit Theorem, and generation and rendering of R markdown instructions for interpretative output.
Author: David Gerbing, The School of Business, Portland State University
Maintainer: David W. Gerbing <gerbing@pdx.edu>
Diff between lessR versions 4.0.6 dated 2021-10-25 and 4.0.8 dated 2021-11-18
DESCRIPTION | 8 MD5 | 134 ++++++------- NEWS | 92 +++++++++ R/ANOVA.R | 14 - R/ANOVAz2.R | 137 +++++++------ R/BarChart.R | 80 +++++-- R/Logit.R | 6 R/PieChart.R | 18 + R/Plot.R | 21 +- R/Regression.R | 39 ++- R/Sort.R | 46 +--- R/bc.zmain.R | 77 ++----- R/corScree.R | 12 - R/cr.data.frame.R | 7 R/logit.z4Pred.R | 54 +++-- R/pc.zmain.R | 11 - R/pivot.R | 43 ++-- R/plt.zlattice.R | 53 +++-- R/plt.zmain.R | 31 +-- R/plt.zmat.R | 5 R/rec.zmain.R | 2 R/reg.z1bckBasic.R | 7 R/reg.z1fitBasic.R | 15 - R/reg.z1modelBasic.R | 14 + R/reg.z3dnResidual.R | 4 R/reg.z3resfitResidual.R | 31 ++- R/reg.z5Plot.R | 50 ++-- R/reg.zKfold.R | 20 + R/rescale.R | 6 R/style.R | 12 - R/tt.z1graph.R | 32 +-- R/tt.z1group.R | 14 - R/zzz.R | 13 - build/vignette.rds |binary inst/doc/BarChart.R | 17 + inst/doc/BarChart.Rmd | 44 +++- inst/doc/BarChart.html | 305 +++++++++++++++++++++++++----- inst/doc/Customize.R | 18 + inst/doc/Customize.Rmd | 32 +++ inst/doc/Customize.html | 263 +++++++++++++++++++++++-- inst/doc/Extract.html | 218 ++++++++++++++++++++- inst/doc/FactorAnalysis.html | 198 +++++++++++++++++++ inst/doc/Histogram.html | 206 +++++++++++++++++++- inst/doc/Means.html | 218 ++++++++++++++++++++- inst/doc/Plot.R | 11 + inst/doc/Plot.Rmd | 27 ++ inst/doc/Plot.html | 340 ++++++++++++++++++++++++++++----- inst/doc/Proportions.html | 200 +++++++++++++++++++ inst/doc/ReadWrite.html | 198 +++++++++++++++++++ inst/doc/Regression.html | 285 +++++++++++++++++++++++++--- inst/doc/Time.html | 224 ++++++++++++++++++++-- inst/doc/pivot.R | 8 inst/doc/pivot.Rmd | 22 -- inst/doc/pivot.html | 437 +++++++++++++++++++++++++++++++------------ inst/doc/utilities.html | 221 ++++++++++++++++++++- inst/shiny_examples/PieChart |only man/ANOVA.Rd | 4 man/BarChart.Rd | 27 +- man/PieChart.Rd | 2 man/Plot.Rd | 3 man/Regression.Rd | 27 +- man/pivot.Rd | 15 - man/rescale.Rd | 2 man/ttest.Rd | 2 vignettes/BarChart.Rmd | 44 +++- vignettes/Customize.Rmd | 32 +++ vignettes/Plot.Rmd | 27 ++ vignettes/pivot.Rmd | 22 -- 68 files changed, 3946 insertions(+), 861 deletions(-)
Title: Tabulate P.L. 94-171 Redistricting Data Summary Files
Description: Tools to process legacy format summary redistricting data files
produced by the United States Census Bureau pursuant to P.L. 94-171. These
files are generally available earlier but are difficult to work with as-is.
Author: Cory McCartan [aut, cre],
Christopher T. Kenny [aut]
Maintainer: Cory McCartan <cmccartan@g.harvard.edu>
Diff between PL94171 versions 0.3.2 dated 2021-08-06 and 1.0.1 dated 2021-11-18
DESCRIPTION | 9 LICENSE | 4 MD5 | 94 - NAMESPACE | 82 NEWS.md | 46 R/PL94171-package.R | 28 R/headers.R | 74 R/pl_crosswalk.R | 238 +- R/pl_ex.R | 34 R/pl_geog_levels.R | 216 +- R/pl_get_baf.R | 126 - R/pl_get_prototype.R | 214 +- R/pl_get_vtd.R | 90 - R/pl_read.R | 245 +- R/pl_select_standard.R | 224 +- R/pl_subset.R | 86 R/pl_tidy_shp.R | 130 - R/utils.R | 6 README.md | 148 - build/vignette.rds |binary inst/doc/PL94171.R | 84 inst/doc/PL94171.Rmd | 256 +- inst/doc/PL94171.html | 506 ++--- inst/extdata/ri2018_2020Style.pl/ri000012018_2020Style.pl | 1212 +++++++------- inst/extdata/ri2018_2020Style.pl/ri000022018_2020Style.pl | 1212 +++++++------- inst/extdata/ri2018_2020Style.pl/ri000032018_2020Style.pl | 1212 +++++++------- inst/extdata/ri2018_2020Style.pl/rigeo2018_2020Style.pl | 1212 +++++++------- man/PL94171-package.Rd | 66 man/pl_crosswalk.Rd | 60 man/pl_geog_levels.Rd | 46 man/pl_get_baf.Rd | 70 man/pl_get_prototype.Rd | 122 - man/pl_get_vtd.Rd | 62 man/pl_read.Rd | 66 man/pl_retally.Rd | 82 man/pl_select_standard.Rd | 88 - man/pl_subset.Rd | 70 man/pl_tidy_shp.Rd | 74 man/pl_url.Rd | 52 tests/testthat.R | 8 tests/testthat/setup.R | 2 tests/testthat/test-crosswalk.R | 90 - tests/testthat/test-read.R | 10 tests/testthat/test-select.R | 56 tests/testthat/test-shp.R | 28 tests/testthat/test-subset.R | 14 tests/testthat/test-urls.R | 14 vignettes/PL94171.Rmd | 256 +- 48 files changed, 4573 insertions(+), 4551 deletions(-)
Title: An R Port of the 'ImageJ' Plugin 'Auto Threshold'
Description: Algorithms for automatically finding appropriate
thresholds for numerical data, with special functions for thresholding
images. Provides the 'ImageJ' 'Auto Threshold' plugin functionality to
R users. See <https://imagej.net/plugins/auto-threshold> and Landini et al.
(2017) <DOI:10.1111/jmi.12474>.
Author: Rory Nolan [aut, cre, trl] (<https://orcid.org/0000-0002-5239-4043>),
Luis Alvarez [ctb] (<https://orcid.org/0000-0003-1316-1906>),
Sergi Padilla-Parra [ctb, ths]
(<https://orcid.org/0000-0002-8010-9481>),
Gabriel Landini [ctb, cph] (<https://orcid.org/0000-0002-9689-0989>)
Maintainer: Rory Nolan <rorynoolan@gmail.com>
Diff between autothresholdr versions 1.3.11 dated 2021-05-12 and 1.3.12 dated 2021-11-18
autothresholdr-1.3.11/autothresholdr/tests/testthat/test_auto_thresh_methods.R |only autothresholdr-1.3.11/autothresholdr/tests/testthat/test_stack_thresh.R |only autothresholdr-1.3.11/autothresholdr/tests/testthat/test_thresh.R |only autothresholdr-1.3.11/autothresholdr/tests/testthat/test_utils.R |only autothresholdr-1.3.12/autothresholdr/DESCRIPTION | 13 autothresholdr-1.3.12/autothresholdr/MD5 | 36 autothresholdr-1.3.12/autothresholdr/NEWS.md | 6 autothresholdr-1.3.12/autothresholdr/R/stack_thresh.R | 6 autothresholdr-1.3.12/autothresholdr/R/thresh.R | 2 autothresholdr-1.3.12/autothresholdr/build/vignette.rds |binary autothresholdr-1.3.12/autothresholdr/inst/doc/finding-thresholds.Rmd | 2 autothresholdr-1.3.12/autothresholdr/inst/doc/finding-thresholds.html | 377 ++-------- autothresholdr-1.3.12/autothresholdr/inst/doc/thresholding-image-stacks.html | 271 +------ autothresholdr-1.3.12/autothresholdr/inst/doc/thresholding-images.Rmd | 2 autothresholdr-1.3.12/autothresholdr/inst/doc/thresholding-images.html | 267 +------ autothresholdr-1.3.12/autothresholdr/man/auto_thresh.Rd | 2 autothresholdr-1.3.12/autothresholdr/src/RcppExports.cpp | 5 autothresholdr-1.3.12/autothresholdr/tests/testthat/test-auto-thresh-methods.R |only autothresholdr-1.3.12/autothresholdr/tests/testthat/test-stack-thresh.R |only autothresholdr-1.3.12/autothresholdr/tests/testthat/test-thresh.R |only autothresholdr-1.3.12/autothresholdr/tests/testthat/test-utils.R |only autothresholdr-1.3.12/autothresholdr/vignettes/finding-thresholds.Rmd | 2 autothresholdr-1.3.12/autothresholdr/vignettes/thresholding-images.Rmd | 2 23 files changed, 237 insertions(+), 756 deletions(-)
More information about autothresholdr at CRAN
Permanent link
Title: Methods for Joint Dimension Reduction and Clustering
Description: A class of methods that combine dimension reduction and clustering of continuous, categorical or mixed-type data (Markos, Iodice D'Enza and van de Velden 2019; <DOI:10.18637/jss.v091.i10>). For continuous data, the package contains implementations of factorial K-means (Vichi and Kiers 2001; <DOI:10.1016/S0167-9473(00)00064-5>) and reduced K-means (De Soete and Carroll 1994; <DOI:10.1007/978-3-642-51175-2_24>); both methods that combine principal component analysis with K-means clustering. For categorical data, the package provides MCA K-means (Hwang, Dillon and Takane 2006; <DOI:10.1007/s11336-004-1173-x>), i-FCB (Iodice D'Enza and Palumbo 2013, <DOI:10.1007/s00180-012-0329-x>) and Cluster Correspondence Analysis (van de Velden, Iodice D'Enza and Palumbo 2017; <DOI:10.1007/s11336-016-9514-0>), which combine multiple correspondence analysis with K-means. For mixed-type data, it provides mixed Reduced K-means and mixed Factorial K-means (van de Velden, Iodice D'Enza and Markos 2019; <DOI:10.1002/wics.1456>), which combine PCA for mixed-type data with K-means.
Author: Angelos Markos [aut, cre], Alfonso Iodice D'Enza [aut], Michel van de Velden [aut]
Maintainer: Angelos Markos <amarkos@gmail.com>
Diff between clustrd versions 1.3.7-2 dated 2020-02-29 and 1.3.8 dated 2021-11-18
DESCRIPTION | 8 - MD5 | 34 +++--- R/MCAk.r | 5 - R/clusCA.R | 5 - R/clusmca.R | 2 R/cluspca.R | 4 R/cluspcamix.R | 131 ++++++++++++++++---------- R/iFCB.r | 3 R/outOfIndependence.r | 5 - R/plot.clusmca.R | 38 +++---- R/plot.cluspca.R | 31 +++--- R/plot.cluspcamix.R | 244 +++++++++++++++++++++++++++++++------------------ R/print.cluspcamix.R | 21 +++- data/mybond.rda |only man/cluspcamix.Rd | 6 - man/mybond.Rd |only man/plot.clusmca.Rd | 30 +++--- man/plot.cluspca.Rd | 4 man/plot.cluspcamix.Rd | 8 + 19 files changed, 352 insertions(+), 227 deletions(-)
Title: Computation of the WHO Child Growth Standards
Description: Provides WHO Child Growth Standards (z-scores) with
confidence intervals and standard errors around the
prevalence estimates, taking into account complex sample designs.
More information on the methods is
available online:
<https://www.who.int/tools/child-growth-standards>.
Author: Dirk Schumacher [aut, cre],
Elaine Borghi [ctb],
Jonathan Polonsky [ctb],
World Health Organization [cph]
Maintainer: Dirk Schumacher <mail@dirk-schumacher.net>
Diff between anthro versions 0.9.4 dated 2020-10-30 and 1.0.0 dated 2021-11-18
DESCRIPTION | 28 MD5 | 28 NAMESPACE | 14 NEWS.md | 23 R/anthro.R | 6 R/api.R |only R/prevalence.R | 1065 +++++++++++++++++------------- R/utils.R | 1 R/z-score-helper.R | 4 README.md | 78 +- man/anthro.Rd | 6 man/anthro_api_compute_prevalence.Rd |only man/anthro_api_compute_zscore.Rd |only man/anthro_api_compute_zscore_adjusted.Rd |only man/anthro_api_standardize_oedema_var.Rd |only man/anthro_api_standardize_sex_var.Rd |only man/anthro_prevalence.Rd | 39 - tests/testthat/test-prevalence.R | 175 ++++ 18 files changed, 890 insertions(+), 577 deletions(-)
Title: Downloading Supplementary Data from Published Manuscripts
Description: Downloads data supplementary materials from manuscripts,
using papers' DOIs as references. Facilitates open, reproducible
research workflows: scientists re-analyzing published datasets can
work with them as easily as if they were stored on their own
computer, and others can track their analysis workflow
painlessly. The main function suppdata() returns a (temporary)
location on the user's computer where the file is stored, making
it simple to use suppdata() with standard functions like
read.csv().
Author: William D. Pearse [aut, cre] (<https://orcid.org/0000-0002-6241-3164>),
Scott Chamberlain [aut] (<https://orcid.org/0000-0003-1444-9135>),
Daniel Nuest [aut] (<https://orcid.org/0000-0002-0024-5046>),
Ross Mounce [rev] (Ross Mounce reviewed the package for rOpenSci, see
https://github.com/ropensci/onboarding/issues/195),
Sarah Supp [rev] (Sarah Supp reviewed the package for rOpenSci, see
https://github.com/ropensci/onboarding/issues/195)
Maintainer: William D. Pearse <will.pearse@gmail.com>
Diff between suppdata versions 1.1-7 dated 2021-09-13 and 1.1-8 dated 2021-11-18
suppdata-1.1-7/suppdata/tests/testthat/test-fulltext.R |only suppdata-1.1-8/suppdata/DESCRIPTION | 9 +-- suppdata-1.1-8/suppdata/MD5 | 11 ++-- suppdata-1.1-8/suppdata/NAMESPACE | 2 suppdata-1.1-8/suppdata/R/suppdata.R | 41 ----------------- suppdata-1.1-8/suppdata/inst/doc/suppdata-intro.pdf |binary suppdata-1.1-8/suppdata/man/suppdata.Rd | 36 -------------- 7 files changed, 11 insertions(+), 88 deletions(-)
Title: Optimal Distribution Preserving Down-Sampling of Bio-Medical
Data
Description: An optimized method for distribution-preserving class-proportional down-sampling of bio-medical data.
Author: Jorn Lotsch [aut,cre] (<https://orcid.org/0000-0002-5818-6958>),
Sebastian Malkusch [aut] (<https://orcid.org/0000-0001-6766-140X>),
Alfred Ultsch [aut] (<https://orcid.org/0000-0002-7845-3283>)
Maintainer: Jorn Lotsch <j.lotsch@em.uni-frankfurt.de>
Diff between opdisDownsampling versions 0.7.0 dated 2021-10-18 and 0.8.0 dated 2021-11-18
DESCRIPTION | 10 +++--- MD5 | 12 ++++--- NAMESPACE | 26 +++++++-------- R/CompDistrib.R |only R/MakeReducedDataMat.R |only R/opdisDownsampling.R | 78 ++++++----------------------------------------- man/GMMartificialData.Rd | 2 - man/opdisDownsampling.Rd | 9 +++-- 8 files changed, 42 insertions(+), 95 deletions(-)
More information about opdisDownsampling at CRAN
Permanent link
Title: Generalized Dissimilarity Modeling
Description: A toolkit with functions to fit, plot, summarize, and apply Generalized Dissimilarity Models.
Author: Matt Fitzpatrick [aut, cre] (<https://orcid.org/0000-0003-1911-8407>),
Karel Mokany [aut] (<https://orcid.org/0000-0003-4199-3697>),
Glenn Manion [aut],
Diego Nieto-Lugilde [aut] (<https://orcid.org/0000-0003-4135-2881>),
Simon Ferrier [aut] (<https://orcid.org/0000-0001-7884-2388>),
Matthew Lisk [ctb],
Chris Ware [ctb],
Skip Woolley [ctb],
Tom Harwood [ctb]
Maintainer: Matt Fitzpatrick <mfitzpatrick@umces.edu>
Diff between gdm versions 1.5.0 dated 2021-11-16 and 1.5.0-1 dated 2021-11-18
gdm-1.5.0-1/gdm/DESCRIPTION | 20 +++++++------- gdm-1.5.0-1/gdm/MD5 | 28 +++++++++---------- gdm-1.5.0-1/gdm/R/gdm.fit.R | 35 ------------------------ gdm-1.5.0-1/gdm/R/gdm.formatsitepair.R | 2 - gdm-1.5.0-1/gdm/R/gdm.plot.R | 34 +++++++++++++++++++++++ gdm-1.5.0-1/gdm/R/gdm.predict.R | 2 - gdm-1.5.0-1/gdm/R/gdm.summary.R | 40 +++++++++++++++++++++++++--- gdm-1.5.0-1/gdm/R/gdm.transform.R | 2 - gdm-1.5.0-1/gdm/inst/extdata/swBioclims.grd |only gdm-1.5.0-1/gdm/inst/extdata/swBioclims.gri |only gdm-1.5.0-1/gdm/man/figures |only gdm-1.5.0-1/gdm/man/formatsitepair.Rd | 2 - gdm-1.5.0-1/gdm/man/gdm.Rd | 2 - gdm-1.5.0-1/gdm/man/gdm.transform.Rd | 2 - gdm-1.5.0-1/gdm/man/predict.gdm.Rd | 2 - gdm-1.5.0/gdm/README.md |only gdm-1.5.0/gdm/inst/extdata/stackedVars.grd |only gdm-1.5.0/gdm/inst/extdata/stackedVars.gri |only 18 files changed, 102 insertions(+), 69 deletions(-)
Title: Boltzmann Bayes Learner
Description: Supervised learning using Boltzmann Bayes model inference,
which extends naive Bayes model to include interactions. Enables
classification of data into multiple response groups based on a large
number of discrete predictors that can take factor values of
heterogeneous levels. Either pseudo-likelihood or mean field
inference can be used with L2 regularization, cross-validation, and
prediction on new data.
Woo et al. (2016) <doi:10.1186/s12864-016-2871-3>.
Author: Jun Woo [aut, cre] (<https://orcid.org/0000-0003-3220-2064>)
Maintainer: Jun Woo <junwoo035@gmail.com>
Diff between bbl versions 0.4.0 dated 2021-02-03 and 0.4.1 dated 2021-11-18
bbl-0.4.0/bbl/vignettes/mnist_map.pdf |only bbl-0.4.0/bbl/vignettes/refs.bib |only bbl-0.4.1/bbl/DESCRIPTION | 8 ++++---- bbl-0.4.1/bbl/MD5 | 28 ++++++++++++++-------------- bbl-0.4.1/bbl/R/mlk.R | 2 +- bbl-0.4.1/bbl/README.md | 1 + bbl-0.4.1/bbl/build/vignette.rds |binary bbl-0.4.1/bbl/inst/doc/article.R | 2 +- bbl-0.4.1/bbl/inst/doc/article.Rnw | 33 +++++++++++++++++++-------------- bbl-0.4.1/bbl/inst/doc/article.pdf |binary bbl-0.4.1/bbl/man/mlestimate.Rd | 4 ++-- bbl-0.4.1/bbl/src/RcppExports.cpp | 5 +++++ bbl-0.4.1/bbl/src/bfgs.cpp | 16 +++++++++------- bbl-0.4.1/bbl/vignettes/article.Rnw | 33 +++++++++++++++++++-------------- bbl-0.4.1/bbl/vignettes/digits.pdf |only bbl-0.4.1/bbl/vignettes/ref.bib |only bbl-0.4.1/bbl/vignettes/tfbf.pdf |binary 17 files changed, 75 insertions(+), 57 deletions(-)
Title: Miscellaneous Functions for Working with 'stars' Rasters
Description: Miscellaneous functions for working with 'stars' objects, mainly single-band rasters. Currently includes functions for: (1) focal filtering, (2) detrending of Digital Elevation Models, (3) calculating flow length, (4) calculating the Convergence Index, (5) calculating topographic aspect and topographic slope.
Author: Michael Dorman [aut, cre]
Maintainer: Michael Dorman <dorman@post.bgu.ac.il>
Diff between starsExtra versions 0.2.6 dated 2021-09-06 and 0.2.7 dated 2021-11-18
DESCRIPTION | 6 LICENSE | 2 MD5 | 16 NEWS.md | 7 R/CI.R | 2 R/aspect.R | 2 R/slope.R | 2 build/vignette.rds |binary inst/doc/intro.html | 1291 +++++++++++++++++++++++++++++++++++++++++++++++++++- 9 files changed, 1300 insertions(+), 28 deletions(-)
Title: 'NOAA' Weather Data from R
Description: Client for many 'NOAA' data sources including the 'NCDC' climate
'API' at <https://www.ncdc.noaa.gov/cdo-web/webservices/v2>, with functions for
each of the 'API' 'endpoints': data, data categories, data sets, data types,
locations, location categories, and stations. In addition, we have an interface
for 'NOAA' sea ice data, the 'NOAA' severe weather inventory, 'NOAA' Historical
Observing 'Metadata' Repository ('HOMR') data, 'NOAA' storm data via 'IBTrACS',
tornado data via the 'NOAA' storm prediction center, and more.
Author: Scott Chamberlain [aut] (<https://orcid.org/0000-0003-1444-9135>),
Daniel Hocking [ctb, cre] (<https://orcid.org/0000-0003-1889-9184>),
Brooke Anderson [ctb],
Maëlle Salmon [ctb],
Adam Erickson [ctb],
Nicholas Potter [ctb],
Joseph Stachelek [ctb],
Alex Simmons [ctb],
Karthik Ram [ctb],
Hart Edmund [ctb],
rOpenSci [fnd] (https://ropensci.org)
Maintainer: Daniel Hocking <djhocking@gmail.com>
Diff between rnoaa versions 1.3.4 dated 2021-05-19 and 1.3.7 dated 2021-11-18
rnoaa-1.3.4/rnoaa/tests/fixtures/arc2_many_dates.yml |only rnoaa-1.3.4/rnoaa/tests/fixtures/lcd_1.yml |only rnoaa-1.3.7/rnoaa/DESCRIPTION | 18 rnoaa-1.3.7/rnoaa/MD5 | 89 - rnoaa-1.3.7/rnoaa/NAMESPACE | 1 rnoaa-1.3.7/rnoaa/NEWS.md | 9 rnoaa-1.3.7/rnoaa/R/arc2.R | 9 rnoaa-1.3.7/rnoaa/R/bsw.R | 26 rnoaa-1.3.7/rnoaa/R/cpc.R | 17 rnoaa-1.3.7/rnoaa/R/ghcnd.R | 12 rnoaa-1.3.7/rnoaa/R/homr.R | 2 rnoaa-1.3.7/rnoaa/R/isd.R | 6 rnoaa-1.3.7/rnoaa/R/isd_read.R | 2 rnoaa-1.3.7/rnoaa/R/isd_stations.R | 2 rnoaa-1.3.7/rnoaa/R/isd_stations_search.R | 2 rnoaa-1.3.7/rnoaa/R/lcd.R | 357 ++++ rnoaa-1.3.7/rnoaa/R/rnoaa_caching.R | 16 rnoaa-1.3.7/rnoaa/R/seaice_tabular.R | 2 rnoaa-1.3.7/rnoaa/R/zzz.r | 33 rnoaa-1.3.7/rnoaa/inst/extdata/gsom_readme.txt | 1288 ++++++++-------- rnoaa-1.3.7/rnoaa/inst/extdata/gsoy_readme.txt | 1182 +++++++------- rnoaa-1.3.7/rnoaa/man/arc2.Rd | 2 rnoaa-1.3.7/rnoaa/man/bsw.Rd | 4 rnoaa-1.3.7/rnoaa/man/cpc_prcp.Rd | 10 rnoaa-1.3.7/rnoaa/man/ghcnd.Rd | 7 rnoaa-1.3.7/rnoaa/man/isd.Rd | 6 rnoaa-1.3.7/rnoaa/man/isd_read.Rd | 2 rnoaa-1.3.7/rnoaa/man/isd_stations.Rd | 2 rnoaa-1.3.7/rnoaa/man/isd_stations_search.Rd | 2 rnoaa-1.3.7/rnoaa/man/lcd.Rd | 22 rnoaa-1.3.7/rnoaa/man/lcd_columns.Rd |only rnoaa-1.3.7/rnoaa/man/rnoaa_caching.Rd | 2 rnoaa-1.3.7/rnoaa/man/sea_ice_tabular.Rd | 2 rnoaa-1.3.7/rnoaa/tests/fixtures/arc2_1.yml | 29 rnoaa-1.3.7/rnoaa/tests/fixtures/arc2_bounding_box.yml | 62 rnoaa-1.3.7/rnoaa/tests/fixtures/cpc_prcp_us_false1.yml | 29 rnoaa-1.3.7/rnoaa/tests/fixtures/cpc_prcp_us_false2.yml | 29 rnoaa-1.3.7/rnoaa/tests/fixtures/cpc_prcp_us_false3.yml | 29 rnoaa-1.3.7/rnoaa/tests/fixtures/cpc_prcp_us_true1.yml | 29 rnoaa-1.3.7/rnoaa/tests/fixtures/cpc_prcp_us_true2.yml | 29 rnoaa-1.3.7/rnoaa/tests/fixtures/cpc_prcp_us_true3.yml | 29 rnoaa-1.3.7/rnoaa/tests/testthat.R | 2 rnoaa-1.3.7/rnoaa/tests/testthat/test-arc2.R | 8 rnoaa-1.3.7/rnoaa/tests/testthat/test-check_response.r | 2 rnoaa-1.3.7/rnoaa/tests/testthat/test-coops.R | 12 rnoaa-1.3.7/rnoaa/tests/testthat/test-lcd.R | 24 rnoaa-1.3.7/rnoaa/tests/testthat/test-utilities.R | 15 47 files changed, 1942 insertions(+), 1520 deletions(-)
Title: Permutation-Based All-Resolutions Inference Method
Description: It computes the All-Resolution Inference method in the permutation framework, i.e., simultaneous lower confidence bounds for the number of true discoveries. <arXiv:2012.00368>.
Author: Angela Andreella [aut, cre] (Main author,
<https://orcid.org/0000-0002-1141-3041>)
Maintainer: Angela Andreella <angela.andreella@unipd.it>
Diff between pARI versions 1.0.0 dated 2021-11-17 and 1.1.0 dated 2021-11-18
DESCRIPTION | 6 +++--- MD5 | 13 +++++++------ NEWS.md |only R/permTest.R | 10 ++++++++-- inst/doc/pARI_vignette.html | 14 +++++++------- man/permTest.Rd | 5 +++++ src/lambdaCalibrate.cpp | 2 +- src/permTest.cpp | 1 - 8 files changed, 31 insertions(+), 20 deletions(-)
Title: Online Bayesian Methods for Change Point Analysis
Description: It implements the online Bayesian methods for change point analysis. It can
also perform missing data imputation with methods from 'VIM'. The reference
is Yigiter A, Chen J, An L, Danacioglu N (2015) <doi:10.1080/02664763.2014.1001330>.
Author: Hongyan Xu [cre, aut],
Ayten Yigiter [aut],
Jie Chen [aut]
Maintainer: Hongyan Xu <hxu@augusta.edu>
Diff between onlineBcp versions 0.1.1 dated 2021-04-28 and 0.1.2 dated 2021-11-18
DESCRIPTION | 8 MD5 | 14 - NAMESPACE | 1 NEWS |only R/online_cp.R | 451 +++++++++++++++++++++++-------------------------- man/combine.Rd |only man/online_cp.Rd | 8 man/plot.BayesCP.Rd | 4 man/summary.BayesCP.Rd | 2 9 files changed, 233 insertions(+), 255 deletions(-)
Title: Bayesian and Classical Audit Sampling
Description: Implements the audit sampling workflow as discussed in Derks et al. (2019) <doi:10.31234/osf.io/9f6ub>. The package makes it easy for an auditor to plan a statistical sample, select the sample from the population, and evaluate the misstatement in the sample compliant with the International Standards on Auditing. Next to classical audit sampling methodology, the package implements Bayesian equivalents of these methods whose statistical underpinnings are described in Derks et al. (2021) <doi:10.1111/ijau.12240> and Derks et al. (2021) <doi:10.31234/osf.io/kzqp5>.
Author: Koen Derks [aut, cre] (<https://orcid.org/0000-0002-5533-9349>)
Maintainer: Koen Derks <k.derks@nyenrode.nl>
Diff between jfa versions 0.6.0 dated 2021-09-22 and 0.6.1 dated 2021-11-18
DESCRIPTION | 14 - MD5 | 100 +++++----- NEWS.md | 19 ++ R/auditPrior.R | 2 R/evaluation.R | 2 R/planning.R | 4 R/selection.R | 72 ++++--- README.md | 22 +- build/vignette.rds |binary inst/CITATION | 4 inst/doc/jfa.R | 2 inst/doc/jfa.Rmd | 77 ++++---- inst/doc/jfa.html | 99 +++++----- inst/doc/v1_sampling_workflow.Rmd | 20 +- inst/doc/v1_sampling_workflow.html | 22 +- inst/doc/v2_bayesian_sampling_workflow.Rmd | 14 - inst/doc/v2_bayesian_sampling_workflow.html | 16 - inst/doc/v3_prior_distributions.Rmd | 8 inst/doc/v3_prior_distributions.html | 8 inst/doc/v4_selection_methodology.R | 12 + inst/doc/v4_selection_methodology.Rmd | 78 +++++--- inst/doc/v4_selection_methodology.html | 88 ++++++--- inst/doc/v5_estimating_misstatement.R | 13 + inst/doc/v5_estimating_misstatement.Rmd | 46 ++++ inst/doc/v5_estimating_misstatement.html | 177 +++++++++++++++++-- inst/doc/v6_testing_misstatement.R | 12 - inst/doc/v6_testing_misstatement.Rmd | 71 ++++--- inst/doc/v6_testing_misstatement.html | 125 ++++++++----- inst/doc/v7_bayes_factors_summary_statistics.R | 7 inst/doc/v7_bayes_factors_summary_statistics.Rmd | 34 ++- inst/doc/v7_bayes_factors_summary_statistics.html | 67 +++---- man/auditPrior.Rd | 2 man/carrier.Rd | 72 +++---- man/evaluation.Rd | 2 man/planning.Rd | 2 man/selection.Rd | 15 - tests/testthat/test-consistency-auditPrior.R | 3 tests/testthat/test-consistency-evaluation.R | 41 ++-- tests/testthat/test-consistency-planning.R | 2 tests/testthat/test-consistency-selection.R | 53 +++++ tests/testthat/test-consistency-statistical-tables.R | 2 tests/testthat/test-validation-smash21.R | 14 - tests/testthat/test-validation-touwhoogduin.R | 5 vignettes/jfa.Rmd | 77 ++++---- vignettes/v1_sampling_workflow.Rmd | 20 +- vignettes/v2_bayesian_sampling_workflow.Rmd | 14 - vignettes/v3_prior_distributions.Rmd | 8 vignettes/v4_selection_methodology.Rmd | 78 +++++--- vignettes/v5_estimating_misstatement.Rmd | 46 ++++ vignettes/v6_testing_misstatement.Rmd | 71 ++++--- vignettes/v7_bayes_factors_summary_statistics.Rmd | 34 ++- 51 files changed, 1174 insertions(+), 622 deletions(-)
Title: Visualization of a Correlation Matrix
Description: Provides a visual exploratory tool on correlation matrix that supports automatic variable reordering to help detect hidden patterns among variables.
Author: Taiyun Wei [cre, aut],
Viliam Simko [aut],
Michael Levy [ctb],
Yihui Xie [ctb],
Yan Jin [ctb],
Jeff Zemla [ctb],
Moritz Freidank [ctb],
Jun Cai [ctb],
Tomas Protivinsky [ctb]
Maintainer: Taiyun Wei <weitaiyun@gmail.com>
Diff between corrplot versions 0.91 dated 2021-11-10 and 0.92 dated 2021-11-18
DESCRIPTION | 6 LICENSE | 4 MD5 | 82 - NAMESPACE | 28 NEWS.md | 297 ++-- R/colorlegend.R | 226 +-- R/colors.R | 186 +-- R/cor-mtest.R | 100 - R/corrMatOrder.R | 157 +- R/corrRect.R | 275 ++-- R/corrRect.hclust.R | 92 - R/corrplot-package.R | 86 - R/corrplot.R | 2142 ++++++++++++++++++------------------ R/corrplot.mixed.R | 174 +- README.md | 122 +- build/vignette.rds |binary inst/CITATION | 48 inst/doc/corrplot-intro.R | 438 +++---- inst/doc/corrplot-intro.Rmd | 964 ++++++++-------- inst/doc/corrplot-intro.html | 934 ++++++++------- man/COL1.Rd | 5 man/COL2.Rd | 5 man/colorlegend.Rd | 223 +-- man/cor.mtest.Rd | 70 - man/corrMatOrder.Rd | 160 +- man/corrRect.Rd | 262 ++-- man/corrRect.hclust.Rd | 154 +- man/corrplot-package.Rd | 80 - man/corrplot.Rd | 1104 +++++++++--------- man/corrplot.mixed.Rd | 150 +- tests/testthat.R | 8 tests/testthat/test-colorlegend.R | 114 - tests/testthat/test-cor-mtest.R | 50 tests/testthat/test-corrRect.R | 126 +- tests/testthat/test-corrplot.R | 576 ++++----- vignettes/corrplot-intro.Rmd | 964 ++++++++-------- vignettes/example-colorlegend.R | 108 - vignettes/example-corrMatOrder.R | 56 vignettes/example-corrRect.R | 146 +- vignettes/example-corrRect.hclust.R | 70 - vignettes/example-corrplot.R | 458 +++---- vignettes/example-corrplot.mixed.R | 26 42 files changed, 5750 insertions(+), 5526 deletions(-)
Title: Regression Analysis Linear and Nonlinear for Agriculture
Description: Linear and nonlinear regression analysis common in agricultural science articles (Archontoulis & Miguez (2015). <doi:10.2134/agronj2012.0506>). The package includes polynomial, exponential, gaussian, logistic, logarithmic, segmented, non-parametric models, among others. The functions return the model coefficients and their respective p values, coefficient of determination, root mean square error, AIC, BIC, as well as graphs with the equations automatically.
Author: Gabriel Danilo Shimizu [aut, cre]
(<https://orcid.org/0000-0001-8524-508X>),
Leandro Simoes Azeredo Goncalves [aut, ctb]
(<https://orcid.org/0000-0001-9700-9375>)
Maintainer: Gabriel Danilo Shimizu <shimizu@uel.br>
Diff between AgroReg versions 1.2.0 dated 2021-10-11 and 1.2.1 dated 2021-11-18
DESCRIPTION | 11 +- MD5 | 202 +++++++++++++++++++++--------------------- NAMESPACE | 12 ++ NEWS.md | 12 ++ R/AM_analysis.R | 15 +-- R/BC_analysis.R | 18 ++- R/BIEXP_analysis.R | 11 +- R/CD_analysis.R | 11 +- R/LL_analysis.R | 11 +- R/LM13_analysis.R | 47 ++++++++- R/LM13i_analysis.R | 47 ++++++++- R/LM23_analysis.R | 46 ++++++++- R/LM23i_analysis.R | 46 ++++++++- R/LM2i3_analysis.R | 19 ++- R/LM_analysis.R | 121 +++++++++++++++++-------- R/LM_i_analysis.R | 118 ++++++++++++++++-------- R/LNplt_analysis.R | 20 ++-- R/LOG2_analysis.R | 12 +- R/LOG_analysis.R | 12 +- R/MM_analysis.R | 34 ++++--- R/N_analysis.R | 17 ++- R/PAGE_analysis.R | 13 +- R/SH_function.R | 26 +---- R/VB_analysis.R | 26 +---- R/VG_analysis.R | 11 +- R/asymptotic_analysis.R | 13 +- R/asymptotic_i_analysis.R | 12 +- R/asymptotic_i_sup_analysis.R | 12 +- R/asymptotic_sup_analysis.R | 10 +- R/beta_analysis.R | 11 +- R/correlation_analysis.R |only R/extractmodel_analysis.R |only R/gaussian_analysis.R | 11 +- R/gompertz_analysis.R | 26 +---- R/hill_analysis.R | 42 +++++--- R/linearlinear_analysis.R | 21 +++- R/loess_analysis.R | 11 +- R/logistic_analysis.R | 11 +- R/lorentz_analysis.R | 12 +- R/midilli_analysis.R | 11 +- R/midillim_analysis.R | 12 +- R/mitscherlich_analysis.R | 11 +- R/newton_analysis.R | 14 +- R/peleg_analysis.R | 14 +- R/plot_arrange.R | 25 +++-- R/pltLN_analysis.R | 19 ++- R/pltQD_analysis.R | 19 ++- R/potential_analysis.R | 10 +- R/quadraticplateau_analysis.R | 19 ++- R/regression.R | 24 ++-- R/thompson_analysis.R | 11 +- R/valcam_analysis.R | 11 +- R/weibull_analysis.R | 26 +---- R/yieldloss_analysis.R | 15 +-- man/AM.Rd | 7 + man/BC.Rd | 5 - man/CD.Rd | 5 - man/GP.Rd | 5 - man/LL.Rd | 5 - man/LM.Rd | 14 ++ man/LM13.Rd | 8 + man/LM13i.Rd | 8 + man/LM23.Rd | 8 + man/LM23i.Rd | 8 + man/LM2i3.Rd | 8 + man/LM_i.Rd | 14 ++ man/LOG.Rd | 5 - man/LOG2.Rd | 5 - man/MM.Rd | 5 - man/Nreg.Rd | 11 ++ man/PAGE.Rd | 5 - man/SH.Rd | 5 - man/VB.Rd | 5 - man/VG.Rd | 5 - man/asymptotic.Rd | 5 - man/asymptotic_i.Rd | 3 man/asymptotic_ineg.Rd | 5 - man/asymptotic_neg.Rd | 5 - man/beta_reg.Rd | 5 - man/biexponential.Rd | 5 - man/correlation.Rd |only man/extract.model.Rd |only man/gaussianreg.Rd | 5 - man/hill.Rd | 5 - man/linear.linear.Rd | 5 - man/linear.plateau.Rd | 5 - man/loessreg.Rd | 5 - man/logistic.Rd | 5 - man/lorentz.Rd | 5 - man/midilli.Rd | 5 - man/midillim.Rd | 5 - man/mitscherlich.Rd | 5 - man/newton.Rd | 7 + man/peleg.Rd | 5 - man/plateau.linear.Rd | 5 - man/plateau.quadratic.Rd | 5 - man/plot_arrange.Rd | 5 - man/potential.Rd | 5 - man/quadratic.plateau.Rd | 5 - man/regression.Rd | 1 man/thompson.Rd | 5 - man/valcam.Rd | 5 - man/weibull.Rd | 5 - man/yieldloss.Rd | 8 + 104 files changed, 1049 insertions(+), 582 deletions(-)
Title: Mechanical Loading Prediction Through Accelerometer Data
Description: Functions to read, process and analyse accelerometer
data related to mechanical loading variables. This package is
developed and tested for use with raw accelerometer data from
triaxial 'ActiGraph' <https://actigraphcorp.com> accelerometers.
Author: Lucas Veras [aut, cre] (<https://orcid.org/0000-0003-0562-5803>)
Maintainer: Lucas Veras <lucasdsveras@gmail.com>
Diff between impactr versions 0.2.0 dated 2021-09-03 and 0.3.0 dated 2021-11-18
DESCRIPTION | 8 +- MD5 | 32 +++++----- NEWS.md | 6 + R/RcppExports.R | 5 - R/impactr_data.R | 8 +- R/predict.R | 131 +++++++++++++++++++++++++++++++++++------- R/signal_processing.R | 14 +++- README.md | 2 build/partial.rdb |binary build/vignette.rds |binary inst/doc/impactr.html | 10 +-- man/new_impactr_peaks.Rd | 7 +- man/predict_loading.Rd | 3 src/RcppExports.cpp | 18 +---- src/acceleration_rate.cpp | 22 ------- src/compute_loading.cpp | 12 ++- tests/testthat/test-predict.R | 46 +++++++++++--- 17 files changed, 219 insertions(+), 105 deletions(-)
Title: Interactive and Reproducible Data Cleaning
Description: Flexible and efficient cleaning of data with interactivity.
'datacleanr' facilitates best practices in data analyses and reproducibility with built-in features and by translating interactive/manual operations to code.
The package is designed for interoperability, and so seamlessly fits into reproducible analyses pipelines in 'R'.
Author: Alexander Hurley [cre, aut, cph]
(<https://orcid.org/0000-0002-9641-2805>),
Richard Peters [ctb] (<https://orcid.org/0000-0002-7441-1297>),
Christoforos Pappas [ctb] (<https://orcid.org/0000-0001-5721-557X>)
Maintainer: Alexander Hurley <agl.hurley@gmail.com>
Diff between datacleanr versions 1.0.2 dated 2021-11-03 and 1.0.3 dated 2021-11-18
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS.md | 4 ++++ tests/testthat/test-filter_scoped.R | 4 +--- 4 files changed, 11 insertions(+), 9 deletions(-)
Title: MR Spectroscopy Analysis Tools
Description: Tools for reading, visualising and processing Magnetic Resonance
Spectroscopy data. The package includes methods for spectral fitting: Wilson
(2021) <DOI:10.1002/mrm.28385> and spectral alignment: Wilson (2018)
<DOI:10.1002/mrm.27605>.
Author: Martin Wilson [cre, aut] (<https://orcid.org/0000-0002-2089-3956>),
Yong Wang [ctb],
John Muschelli [ctb]
Maintainer: Martin Wilson <martin@pipegrep.co.uk>
Diff between spant versions 1.15.0 dated 2021-10-22 and 1.16.0 dated 2021-11-18
DESCRIPTION | 10 +- MD5 | 158 ++++++++++++++++++------------------- NAMESPACE | 2 NEWS.md | 10 ++ R/basis_set.R | 4 R/benchmark.R | 19 ++++ R/mrs_data_display.R | 2 R/mrs_data_proc.R | 14 +++ R/pulse_sequences.R | 72 ++++++++-------- R/utils.R | 22 ++++- inst/CITATION | 9 +- inst/doc/spant-intro.html | 100 +++++++++++------------ inst/doc/spant-preprocessing.html | 4 man/acquire.Rd | 46 +++++----- man/append_coils.Rd | 38 ++++---- man/append_dyns.Rd | 38 ++++---- man/apply_axes.Rd | 60 +++++++------- man/apply_mrs.Rd | 44 +++++----- man/auto_phase.Rd | 50 +++++------ man/bbase.Rd | 46 +++++----- man/bc_constant.Rd | 40 ++++----- man/calc_ed_from_lambda.Rd | 42 ++++----- man/calc_peak_info_vec.Rd | 40 ++++----- man/calc_spec_diff.Rd | 42 ++++----- man/calc_spec_snr.Rd | 88 ++++++++++---------- man/crop_td_pts.Rd | 42 ++++----- man/ecc.Rd | 52 ++++++------ man/est_noise_sd.Rd | 46 +++++----- man/fit_amps.Rd | 58 ++++++------- man/fp_phase_correct.Rd | 44 +++++----- man/get_1h_brain_basis_paras.Rd | 48 +++++------ man/get_1h_brain_basis_paras_v1.Rd | 48 +++++------ man/get_1h_brain_basis_paras_v2.Rd | 48 +++++------ man/get_2d_psf.Rd | 46 +++++----- man/get_mrsi2d_seg.Rd | 48 +++++------ man/get_mrsi_voi.Rd | 46 +++++----- man/get_mrsi_voxel.Rd | 50 +++++------ man/get_mrsi_voxel_xy_psf.Rd | 50 +++++------ man/get_seg_ind.Rd | 42 ++++----- man/get_voi_seg.Rd | 38 ++++---- man/get_voi_seg_psf.Rd | 38 ++++---- man/get_voxel.Rd | 54 ++++++------ man/grid_shift_xy.Rd | 42 ++++----- man/lb.Rd | 54 ++++++------ man/mrs_data2basis.Rd | 42 ++++----- man/mrs_data2vec.Rd | 54 ++++++------ man/nifti_flip_lr.Rd | 42 ++++----- man/peak_info.Rd | 72 ++++++++-------- man/plot_bc.Rd | 36 ++++---- man/plot_slice_map.Rd | 94 +++++++++++----------- man/re_weighting.Rd | 42 ++++----- man/read_lcm_coord.Rd | 36 ++++---- man/read_mrs_tqn.Rd | 64 +++++++------- man/read_tqn_result.Rd | 48 +++++------ man/rep_mrs.Rd | 54 ++++++------ man/resample_img.Rd | 42 ++++----- man/seq_cpmg_ideal.Rd | 50 +++++------ man/seq_mega_press_ideal.Rd | 84 +++++++++---------- man/seq_press_ideal.Rd | 50 +++++------ man/seq_pulse_acquire.Rd | 42 ++++----- man/seq_pulse_acquire_31p.Rd | 42 ++++----- man/seq_slaser_ideal.Rd | 54 ++++++------ man/seq_spin_echo_ideal.Rd | 46 +++++----- man/seq_spin_echo_ideal_31p.Rd | 46 +++++----- man/seq_steam_ideal.Rd | 50 +++++------ man/set_lw.Rd | 42 ++++----- man/sim_basis.Rd | 64 +++++++------- man/sim_basis_1h_brain.Rd | 70 ++++++++-------- man/sim_basis_1h_brain_press.Rd | 70 ++++++++-------- man/sim_basis_tqn.Rd | 66 +++++++-------- man/sim_brain_1h.Rd | 82 +++++++++---------- man/sim_mol.Rd | 80 +++++++++--------- man/sort_basis.Rd |only man/spant_simulation_benchmark.Rd |only man/spin_sys.Rd | 42 ++++----- man/spm_pve2categorical.Rd | 38 ++++---- man/td_conv_filt.Rd | 42 ++++----- man/varpro_3_para_opts.Rd | 100 +++++++++++------------ man/varpro_opts.Rd | 96 +++++++++++----------- man/write_basis_tqn.Rd | 46 +++++----- man/zf.Rd | 52 ++++++------ 81 files changed, 1975 insertions(+), 1899 deletions(-)
Title: Optimized Automated Gaussian Mixture Assessment
Description: Necessary functions for optimized automated evaluation of the number and parameters of Gaussian mixtures in one-dimensional data. Various methods are available for parameter estimation and for determining the number of modes in the mixture.
Author: Jorn Lotsch [aut,cre] (<https://orcid.org/0000-0002-5818-6958>),
Sebastian Malkusch [aut] (<https://orcid.org/0000-0001-6766-140X>),
Martin Maechler [ctb],
Peter Rousseeuw [ctb],
Anja Struyf [ctb],
Mia Hubert [ctb],
Kurt Hornik [ctb]
Maintainer: Jorn Lotsch <j.lotsch@em.uni-frankfurt.de>
Diff between opGMMassessment versions 0.2.1 dated 2021-11-01 and 0.3 dated 2021-11-18
DESCRIPTION | 13 - MD5 | 20 - NAMESPACE | 42 +-- R/CreateGMM.R | 6 R/DetermineBestGMM.R |only R/PerformGMMfit.R |only R/clusGapP.R | 64 +---- R/cutGMM.R | 2 R/opGMMassessment.R | 567 +++---------------------------------------------- man/GMMplotGG.Rd | 9 man/Mixture3.Rd | 4 man/opGMMassessment.Rd | 16 - 12 files changed, 123 insertions(+), 620 deletions(-)
More information about opGMMassessment at CRAN
Permanent link
Title: Moran Eigenvector-Based Spatial Regression Models
Description: Functions for estimating spatial varying coefficient models, mixed models, and other spatial regression models for Gaussian and non-Gaussian data. Moran eigenvectors are used to an approximate Gaussian process modeling which is interpretable in terms of the Moran coefficient. The GP is used for modeling the spatial processes in residuals and regression coefficients. For details see Murakami (2021) <arXiv:1703.04467v10>.
Author: Daisuke Murakami <dmuraka@ism.ac.jp>
Maintainer: Daisuke Murakami <dmuraka@ism.ac.jp>
Diff between spmoran versions 0.2.2 dated 2021-09-13 and 0.2.2.1 dated 2021-11-18
DESCRIPTION | 12 ++++++------ MD5 | 8 ++++---- R/nongauss_y.R | 18 +++++++++--------- R/resf_vc.R | 19 +++++++++++-------- build/vignette.rds |binary 5 files changed, 30 insertions(+), 27 deletions(-)
Title: Connecting to Various Database Platforms
Description: An R 'DataBase Interface' ('DBI') compatible interface to various database platforms ('PostgreSQL', 'Oracle', 'Microsoft SQL Server',
'Amazon Redshift', 'Microsoft Parallel Database Warehouse', 'IBM Netezza', 'Apache Impala', 'Google BigQuery', 'Spark', and 'SQLite'). Also includes support for
fetching data as 'Andromeda' objects. Uses 'Java Database Connectivity' ('JDBC') to connect to databases (except SQLite).
Author: Martijn Schuemie [aut, cre],
Marc Suchard [aut],
Observational Health Data Science and Informatics [cph],
Microsoft Inc. [cph] (SQL Server JDBC driver),
PostgreSQL Global Development Group [cph] (PostgreSQL JDBC driver),
Oracle Inc. [cph] (Oracle JDBC driver),
Amazon Inc. [cph] (RedShift JDBC driver)
Maintainer: Martijn Schuemie <schuemie@ohdsi.org>
Diff between DatabaseConnector versions 4.0.2 dated 2021-04-15 and 5.0.0 dated 2021-11-18
DESCRIPTION | 18 MD5 | 150 NAMESPACE | 4 NEWS.md | 28 R/Andromeda.R | 456 R/BulkLoad.R | 286 R/Compression.R | 16 R/Connect.R | 420 R/CtasHack.R | 91 R/DBI.R | 513 R/DatabaseConnector.R | 25 R/Drivers.R | 122 R/InsertTable.R | 258 R/ListTables.R | 22 R/RStudio.R | 172 R/Sql.R | 759 README.md | 5 build/DatabaseConnector.pdf |15681 +++++----- build/vignette.rds |binary inst/COPYRIGHTS | 9 inst/doc/UsingDatabaseConnector.Rmd | 3 inst/doc/UsingDatabaseConnector.pdf |binary inst/java/DatabaseConnector.jar |binary java/org/ohdsi/databaseConnector/BatchedQuery.java | 36 man/DatabaseConnector-package.Rd | 8 man/connect.Rd | 66 man/createConnectionDetails.Rd | 47 man/createZipFile.Rd | 48 man/dbClearResult-DatabaseConnectorResult-method.Rd | 90 man/dbColumnInfo-DatabaseConnectorResult-method.Rd | 100 man/dbConnect-DatabaseConnectorDriver-method.Rd | 11 man/dbDisconnect-DatabaseConnectorConnection-method.Rd | 88 man/dbExecute-DatabaseConnectorConnection-character-method.Rd | 132 man/dbFetch-DatabaseConnectorResult-method.Rd | 131 man/dbGetQuery-DatabaseConnectorConnection-character-method.Rd | 156 man/dbGetRowCount-DatabaseConnectorResult-method.Rd | 114 man/dbGetRowsAffected-DatabaseConnectorResult-method.Rd | 98 man/dbGetStatement-DatabaseConnectorResult-method.Rd | 88 man/dbHasCompleted-DatabaseConnectorResult-method.Rd | 96 man/dbIsValid-DatabaseConnectorDbiConnection-method.Rd | 178 man/dbIsValid-DatabaseConnectorJdbcConnection-method.Rd | 178 man/dbListFields-DatabaseConnectorConnection-character-method.Rd | 126 man/dbQuoteIdentifier-DatabaseConnectorConnection-character-method.Rd | 114 man/dbQuoteString-DatabaseConnectorConnection-character-method.Rd | 106 man/dbReadTable-DatabaseConnectorConnection-character-method.Rd | 6 man/dbSendQuery-DatabaseConnectorDbiConnection-character-method.Rd | 154 man/dbSendQuery-DatabaseConnectorJdbcConnection-character-method.Rd | 154 man/dbSendStatement-DatabaseConnectorConnection-character-method.Rd | 142 man/dbUnloadDriver-DatabaseConnectorDriver-method.Rd | 124 man/dbWriteTable-DatabaseConnectorConnection-character-data.frame-method.Rd | 180 man/disconnect.Rd | 10 man/downloadJdbcDrivers.Rd | 2 man/executeSql.Rd | 16 man/getAvailableJavaHeapSpace.Rd |only man/getTableNames.Rd | 54 man/insertTable.Rd | 56 man/jdbcDrivers.Rd | 4 man/lowLevelQuerySql.Rd | 4 man/lowLevelQuerySqlToAndromeda.Rd | 30 man/querySql.Rd | 16 man/querySqlToAndromeda.Rd | 57 man/renderTranslateExecuteSql.Rd | 27 man/renderTranslateQueryApplyBatched.Rd |only man/renderTranslateQuerySql.Rd | 25 man/renderTranslateQuerySqlToAndromeda.Rd | 64 man/show-DatabaseConnectorConnection-method.Rd | 80 man/show-DatabaseConnectorDriver-method.Rd | 80 tests/testthat.R | 2 tests/testthat/setup.R | 26 tests/testthat/test-BatchProcess.R |only tests/testthat/test-DBItest.R |only tests/testthat/test-compression.R | 10 tests/testthat/test-connection.R | 271 tests/testthat/test-fetchResults.R | 186 tests/testthat/test-getTableNames.R | 65 tests/testthat/test-insertTable.R | 196 tests/testthat/test-sendUpdates.R | 81 vignettes/UsingDatabaseConnector.Rmd | 3 78 files changed, 12354 insertions(+), 10820 deletions(-)
More information about DatabaseConnector at CRAN
Permanent link
Title: Biological Risk Assessment
Description: A spatio-temporal exposure-hazard model for assessing biological
risk and impact. The model is based on stochastic geometry for describing
the landscape and the exposed individuals, a dispersal kernel for the
dissemination of contaminants, a set of tools to handle spatio-temporal dataframe
and ecotoxicological equations.
Walker E, Leclerc M, Rey JF, Beaudouin R, Soubeyrand S, and Messean A, (2017),
A Spatio-Temporal Exposure-Hazard Model for Assessing Biological Risk and Impact,
Risk Analysis, <doi:10.1111/risa.12941>.
Leclerc M, Walker E, Messean A, Soubeyrand S (2018),
Spatial exposure-hazard and landscape models for assessing the impact of GM crops on non-target organisms,
Science of the Total Environment, 624, 470-479.
Author: Virgile Baudrot [aut],
Emily Walker [aut],
Jean-Francois Rey [aut, cre],
Melen Leclerc [aut],
Samuel Soubeyrand [ctb],
Marc Bourotte [ctb]
Maintainer: Jean-Francois Rey <jean-francois.rey@inrae.fr>
Diff between briskaR versions 1.0.2 dated 2021-01-11 and 1.0.3 dated 2021-11-18
DESCRIPTION | 10 - MD5 | 30 +-- build/vignette.rds |binary data/Hofmann_2009.rda |binary data/Lang_2004.rda |binary data/Precipitation.rda |binary data/df_precipitation.rda |binary data/maize.emitted_pollen.rda |binary data/maize.proportion_pollen.rda |binary data/maize_65.rda |binary data/sfMaize65.rda |binary data/temperatureGermany.rda |binary inst/doc/demonstrations.html | 369 ++++++++++++++++++++------------------- src/Makevars | 8 src/Makevars.win | 2 src/RcppExports.cpp | 5 16 files changed, 220 insertions(+), 204 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-06-21 0.16
2021-01-12 0.15.4
2020-11-13 0.15.3
2020-05-26 0.15.2
2020-02-24 0.15.1
2018-10-11 0.15.0
2018-06-12 0.14.0
2018-05-22 0.13.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-11-18 1.0.9
2020-10-09 1.0.8
2020-08-03 1.0.7
2020-07-07 1.0.5
2020-06-02 1.0.1
Title: Mixed Model Association Test for GEne-Environment Interaction
Description: Use a 'glmmkin' class object (GMMAT package) from the null model to perform generalized linear mixed model-based single-variant and variant set main effect tests, gene-environment interaction tests, and joint tests for association, as proposed in Wang et al. (2020) <DOI:10.1002/gepi.22351>.
Author: Xinyu Wang [aut],
Han Chen [aut, cre],
Duy Pham [aut]
Maintainer: Han Chen <han.chen.2@uth.tmc.edu>
Diff between MAGEE versions 1.0.0 dated 2021-05-10 and 1.0.1 dated 2021-11-18
DESCRIPTION | 20 - MD5 | 29 - NAMESPACE | 2 R/MAGEE.R | 568 ++++++++++++++++--------------- R/glmm.gei.R | 632 ++++++++++++++++++++++++----------- README.md | 6 inst/doc/MAGEE.R | 2 inst/doc/MAGEE.Rnw | 15 inst/doc/MAGEE.pdf |binary inst/extdata/SetID.singlevariant.txt |only inst/extdata/readme | 3 man/MAGEE-package.Rd |only man/MAGEE.Rd | 9 man/glmm.gei.Rd | 6 tests/testthat/test_MAGEE.R | 456 ++++++++++++++++++++++--- tests/testthat/test_glmm.gei.R |only vignettes/MAGEE.Rnw | 15 17 files changed, 1213 insertions(+), 550 deletions(-)
Title: Depth Importance in Precision Medicine (DIPM) Method
Description: An implementation of the Depth Importance in Precision Medicine (DIPM) method
in Chen and Zhang (2020) <doi:10.1093/biostatistics/kxaa021> and Chen and
Zhang (2020) <doi:10.1007/978-3-030-46161-4_16>. The DIPM method is a classification
tree that searches for subgroups with especially poor or strong performance in a given treatment group.
Author: Cai Li [aut, cre],
Victoria Chen [aut],
Heping Zhang [aut]
Maintainer: Cai Li <cli9@ncsu.edu>
Diff between dipm versions 1.3 dated 2021-11-17 and 1.4 dated 2021-11-18
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- tests/Examples/dipm-Ex.Rout.save | 2 +- 3 files changed, 7 insertions(+), 7 deletions(-)
Title: Computational Geometry
Description: R interface to (some of) cddlib
(<https://github.com/cddlib/cddlib>).
Converts back and forth between two representations of a convex polytope:
as solution of a set of linear equalities and inequalities and as
convex hull of set of points and rays.
Also does linear programming and redundant generator elimination
(for example, convex hull in n dimensions). All functions can use exact
infinite-precision rational arithmetic.
Author: Charles J. Geyer <charlie@stat.umn.edu> and
Glen D. Meeden <glen@stat.umn.edu>, incorporates code from
cddlib (ver 0.94f) written by Komei Fukuda <fukuda@ifor.math.ethz.ch>
Maintainer: Charles J. Geyer <charlie@stat.umn.edu>
Diff between rcdd versions 1.4 dated 2021-10-19 and 1.5 dated 2021-11-18
rcdd-1.4/rcdd/inst/doc/Makefile |only rcdd-1.5/rcdd/.Rinstignore | 1 - rcdd-1.5/rcdd/CHANGES | 5 +++++ rcdd-1.5/rcdd/DESCRIPTION | 8 ++++---- rcdd-1.5/rcdd/MD5 | 18 +++++++++--------- rcdd-1.5/rcdd/R/lpcdd.R | 8 +++++--- rcdd-1.5/rcdd/build/vignette.rds |binary rcdd-1.5/rcdd/inst/doc/design.pdf |only rcdd-1.5/rcdd/inst/doc/vinny.Rnw | 19 ++++++++++++------- rcdd-1.5/rcdd/inst/doc/vinny.pdf |binary rcdd-1.5/rcdd/man/lpcdd.Rd | 5 +++-- rcdd-1.5/rcdd/vignettes/vinny.Rnw | 19 ++++++++++++------- 12 files changed, 50 insertions(+), 33 deletions(-)
Title: Design Menu for Radiant: Business Analytics using R and Shiny
Description: The Radiant Design menu includes interfaces for design of
experiments, sampling, and sample size calculation. The application extends
the functionality in 'radiant.data'.
Author: Vincent Nijs [aut, cre]
Maintainer: Vincent Nijs <radiant@rady.ucsd.edu>
Diff between radiant.design versions 1.3.5 dated 2020-03-24 and 1.4.1 dated 2021-11-18
DESCRIPTION | 24 ++++++++++++------------ MD5 | 32 ++++++++++++++++---------------- NEWS.md | 5 +++++ R/aaa.R | 2 +- R/doe.R | 8 ++++---- R/radiant.R | 6 +++--- R/randomizer.R | 16 ++++++++-------- R/sample_size_comp.R | 8 ++++---- R/sampling.R | 8 ++++---- README.md | 20 ++++++++++++-------- inst/app/tools/analysis/doe_ui.R | 12 ++++++------ inst/app/tools/analysis/randomizer_ui.R | 4 ++-- inst/app/tools/analysis/sampling_ui.R | 6 +++--- man/radiant.design.Rd | 2 +- man/radiant.design_viewer.Rd | 2 +- man/radiant.design_window.Rd | 2 +- man/rndnames.Rd | 2 +- 17 files changed, 84 insertions(+), 75 deletions(-)
More information about radiant.design at CRAN
Permanent link
Title: Basics Menu for Radiant: Business Analytics using R and Shiny
Description: The Radiant Basics menu includes interfaces for probability
calculation, central limit theorem simulation, comparing means and proportions,
goodness-of-fit testing, cross-tabs, and correlation. The application extends
the functionality in 'radiant.data'.
Author: Vincent Nijs [aut, cre]
Maintainer: Vincent Nijs <radiant@rady.ucsd.edu>
Diff between radiant.basics versions 1.4.0 dated 2021-06-03 and 1.4.1 dated 2021-11-18
DESCRIPTION | 14 +- MD5 | 40 +++--- NEWS.md | 5 R/compare_means.R | 6 R/compare_props.R | 4 R/correlation.R | 2 R/cross_tabs.R | 6 R/goodness.R | 6 R/prob_calc.R | 4 R/single_mean.R | 2 R/single_prop.R | 2 README.md | 3 inst/app/tools/analysis/clt_ui.R | 96 +++++---------- inst/app/tools/analysis/compare_means_ui.R | 10 - inst/app/tools/analysis/compare_props_ui.R | 2 inst/app/tools/analysis/correlation_ui.R | 6 inst/app/tools/analysis/cross_tabs_ui.R | 2 inst/app/tools/analysis/goodness_ui.R | 2 inst/app/tools/analysis/prob_calc_ui.R | 184 ++++++++++------------------- inst/app/tools/analysis/single_mean_ui.R | 2 inst/app/tools/analysis/single_prop_ui.R | 2 21 files changed, 164 insertions(+), 236 deletions(-)
More information about radiant.basics at CRAN
Permanent link
Title: Present Data with Style
Description: Consists of custom wrapper functions using packages
'openxlsx', 'flextable', and 'officer' to create highly formatted MS office friendly output of your data frames.
These viewer friendly outputs are intended to match expectations of professional looking presentations
in business and consulting scenarios. The functions are opinionated in the sense that they expect the input data
frame to have certain properties in order to take advantage of the automated formatting.
Author: Harrison Tietze [aut, cre]
Maintainer: Harrison Tietze <Harrison4192@gmail.com>
Diff between presenter versions 0.1.0 dated 2021-10-08 and 0.1.1 dated 2021-11-18
presenter-0.1.0/presenter/man/get_lhs.Rd |only presenter-0.1.1/presenter/DESCRIPTION | 8 presenter-0.1.1/presenter/MD5 | 29 - presenter-0.1.1/presenter/NEWS.md | 2 presenter-0.1.1/presenter/R/get_piped_name.R | 165 +++++++--- presenter-0.1.1/presenter/R/make_pivot_table.R | 2 presenter-0.1.1/presenter/inst/doc/flextableAndPowerpoint.Rmd | 4 presenter-0.1.1/presenter/inst/doc/flextableAndPowerpoint.html | 43 +- presenter-0.1.1/presenter/inst/doc/flextableThemes.Rmd | 4 presenter-0.1.1/presenter/inst/doc/flextableThemes.html | 93 +++-- presenter-0.1.1/presenter/inst/doc/formattedFlextable.html | 43 +- presenter-0.1.1/presenter/inst/doc/pivotSummary.html | 10 presenter-0.1.1/presenter/man/get_piped_name.Rd | 34 +- presenter-0.1.1/presenter/man/make_pivot_table.Rd | 2 presenter-0.1.1/presenter/vignettes/flextableAndPowerpoint.Rmd | 4 presenter-0.1.1/presenter/vignettes/flextableThemes.Rmd | 4 16 files changed, 284 insertions(+), 163 deletions(-)
Title: Image Processing Library Based on 'CImg'
Description: Fast image processing for images in up to 4 dimensions (two spatial
dimensions, one time/depth dimension, one colour dimension). Provides most
traditional image processing tools (filtering, morphology, transformations,
etc.) as well as various functions for easily analysing image data using R. The
package wraps 'CImg', <http://cimg.eu>, a simple, modern C++ library for image
processing.
Author: Simon Barthelme [aut],
David Tschumperle [ctb],
Jan Wijffels [ctb],
Haz Edine Assemlal [ctb],
Shota Ochi [cre]
Maintainer: Shota Ochi <shotaochi1990@gmail.com>
Diff between imager versions 0.42.10 dated 2021-06-10 and 0.42.11 dated 2021-11-18
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ build/vignette.rds |binary configure.ac | 7 ++++--- inst/doc/gettingstarted.html | 6 +++--- inst/doc/pixsets.html | 4 ++-- inst/include/CImg.h | 40 ++++++++++++++++++++-------------------- 7 files changed, 39 insertions(+), 38 deletions(-)
Title: Machine Learning Time Series Forecasting
Description: Compute both static and recursive time series forecasts of machine learning models.
Author: Ho Tsung-wu
Maintainer: Ho Tsung-wu <tsungwu@ntnu.edu.tw>
Diff between iForecast versions 1.0.3 dated 2021-07-30 and 1.0.4 dated 2021-11-18
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- R/rollingWindows.R | 16 ++++++++-------- R/ttsAutoML.R | 8 ++++---- R/ttsLSTM.R | 4 ++-- man/rollingWindows.Rd | 10 +++++----- man/ttsAutoML.Rd | 2 +- man/ttsLSTM.Rd | 9 +++++---- 8 files changed, 36 insertions(+), 35 deletions(-)
Title: Easily Apply Formats to Data
Description: Contains a set of functions that can be used to apply
formats to data frames or vectors. The package aims to provide to
functionality similar to that of SAS® formats. Formats are assigned to
the format attribute on data frame columns. Then when the fdata()
function is called, a new data frame is created with the column data
formatted as specified. The package also contains a value() function
to create a user-defined format, similar to a SAS® user-defined format.
Author: David Bosak
Maintainer: David Bosak <dbosak01@gmail.com>
Diff between fmtr versions 1.5.3 dated 2021-10-09 and 1.5.4 dated 2021-11-18
DESCRIPTION | 6 +- MD5 | 86 ++++++++++++++++++++---------------- NEWS.md | 9 +++ R/descriptions.R | 4 - R/fcat.R | 2 R/fmt.R | 71 +++++++++++++++++++++++++++++ R/formats.R | 4 - R/helpers.R | 7 +- R/justification.R | 4 - R/labels.R | 4 - R/widths.R | 4 - README.md | 6 -- build/vignette.rds |binary inst/doc/fmtr-convenience.html | 4 - inst/doc/fmtr-example1.R |only inst/doc/fmtr-example1.Rmd |only inst/doc/fmtr-example1.html |only inst/doc/fmtr-fapply.html | 4 - inst/doc/fmtr-faq.R |only inst/doc/fmtr-faq.Rmd |only inst/doc/fmtr-faq.html |only inst/doc/fmtr-fcat.html | 4 - inst/doc/fmtr-fdata.html | 4 - inst/doc/fmtr-helpers.Rmd | 1 inst/doc/fmtr-helpers.html | 5 +- inst/doc/fmtr.Rmd | 7 +- inst/doc/fmtr.html | 2 inst/extdata |only man/as.data.frame.fmt.Rd | 11 ++++ man/as.fcat.data.frame.Rd | 2 man/as.fcat.tbl_df.Rd | 2 man/as.fmt.Rd | 11 ++++ man/as.fmt.data.frame.Rd |only man/condition.Rd | 10 ++++ man/fmt_cnt_pct.Rd | 7 +- man/images/example1.png |only man/is.format.Rd | 10 ++++ man/labels.fmt.Rd | 10 ++++ man/print.fmt.Rd | 11 ++++ man/value.Rd | 10 ++++ tests/testthat/test-descriptions.R | 3 - tests/testthat/test-formats.R | 37 +++++++++++++++ tests/testthat/test-justification.R | 4 - tests/testthat/test-labels.R | 3 - tests/testthat/test-widths.R | 4 - vignettes/fmtr-example1.Rmd |only vignettes/fmtr-faq.Rmd |only vignettes/fmtr-helpers.Rmd | 1 vignettes/fmtr.Rmd | 7 +- vignettes/output |only 50 files changed, 287 insertions(+), 94 deletions(-)
Title: ExifTool Functionality from R
Description: Reads, writes, and edits EXIF and other file metadata
using ExifTool <https://exiftool.org/>, returning read results as
a data frame. ExifTool supports many different metadata formats
including EXIF, GPS, IPTC, XMP, JFIF, GeoTIFF, ICC Profile,
Photoshop IRB, FlashPix, AFCP and ID3, Lyrics3, as well as the
maker notes of many digital cameras by Canon, Casio, DJI, FLIR,
FujiFilm, GE, GoPro, HP, JVC/Victor, Kodak, Leaf,
Minolta/Konica-Minolta, Motorola, Nikon, Nintendo, Olympus/Epson,
Panasonic/Leica, Pentax/Asahi, Phase One, Reconyx, Ricoh, Samsung,
Sanyo, Sigma/Foveon and Sony.
Author: Joshua O'Brien [aut, cre]
Maintainer: Joshua O'Brien <joshmobrien@gmail.com>
Diff between exiftoolr versions 0.1.6 dated 2021-11-06 and 0.1.7 dated 2021-11-18
DESCRIPTION | 8 ++--- MD5 | 10 +++--- NEWS.md | 9 +++++ R/exif_read.R | 4 +- R/utils.R | 86 +++++++++++++++++++++++++++++++------------------------ man/exif_call.Rd | 2 - 6 files changed, 71 insertions(+), 48 deletions(-)