Title: 'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra
Library
Description: 'Armadillo' is a templated C++ linear algebra library (by Conrad
Sanderson) that aims towards a good balance between speed and ease of
use. Integer, floating point and complex numbers are supported, as
well as a subset of trigonometric and statistics functions. Various
matrix decompositions are provided through optional integration with
LAPACK and ATLAS libraries. The 'RcppArmadillo' package includes the
header files from the templated 'Armadillo' library. Thus users do
not need to install 'Armadillo' itself in order to use
'RcppArmadillo'. From release 7.800.0 on, 'Armadillo' is licensed
under Apache License 2; previous releases were under licensed as MPL
2.0 from version 3.800.0 onwards and LGPL-3 prior to that;
'RcppArmadillo' (the 'Rcpp' bindings/bridge to Armadillo) is licensed
under the GNU GPL version 2 or later, as is the rest of 'Rcpp'.
Author: Dirk Eddelbuettel, Romain Francois, Doug Bates, Binxiang Ni, and Conrad Sanderson
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppArmadillo versions 0.11.2.0.0 dated 2022-06-15 and 0.11.2.3.1 dated 2022-08-18
ChangeLog | 53 DESCRIPTION | 9 MD5 | 60 build/partial.rdb |binary build/vignette.rds |binary configure | 1728 ++++++++++++++++--------- configure.ac | 2 inst/NEWS.Rd | 35 inst/doc/RcppArmadillo-intro.pdf |binary inst/doc/RcppArmadillo-sparseMatrix.pdf |binary inst/include/armadillo_bits/Col_bones.hpp | 2 inst/include/armadillo_bits/Col_meat.hpp | 2 inst/include/armadillo_bits/Cube_bones.hpp | 1 inst/include/armadillo_bits/Cube_meat.hpp | 17 inst/include/armadillo_bits/Mat_bones.hpp | 4 inst/include/armadillo_bits/Mat_meat.hpp | 4 inst/include/armadillo_bits/Row_bones.hpp | 2 inst/include/armadillo_bits/Row_meat.hpp | 2 inst/include/armadillo_bits/arma_rng.hpp | 4 inst/include/armadillo_bits/arma_version.hpp | 2 inst/include/armadillo_bits/compiler_setup.hpp | 132 - inst/include/armadillo_bits/config.hpp | 25 inst/include/armadillo_bits/def_hdf5.hpp | 2 inst/include/armadillo_bits/field_bones.hpp | 4 inst/include/armadillo_bits/field_meat.hpp | 4 inst/include/armadillo_bits/gmm_diag_meat.hpp | 4 inst/include/armadillo_bits/gmm_full_meat.hpp | 4 inst/include/armadillo_bits/include_hdf5.hpp | 10 inst/tinytest/test_scipy2r.R | 4 inst/tinytest/test_sparse.R | 7 inst/tinytest/test_sparseConversion.R | 202 +- 31 files changed, 1466 insertions(+), 859 deletions(-)
Title: Various Utilities for Library Science/Assessment and Cataloging
Description: Provides functions for validating and normalizing bibliographic
codes such as ISBN, ISSN, and LCCN. Also includes functions to communicate
with the WorldCat API, translate Call numbers (Library of Congress and
Dewey Decimal) to their subject classifications or subclassifications,
and provides various loadable data files such call number / subject
crosswalks and code tables.
Author: Tony Fischetti [aut, cre]
Maintainer: Tony Fischetti <tony.fischetti@gmail.com>
Diff between libbib versions 1.6.2 dated 2021-08-18 and 1.6.3 dated 2022-08-18
DESCRIPTION | 10 MD5 | 36 - NEWS.md | 8 R/bibcodes.R | 31 - R/call-numbers-and-subject.R | 32 - R/marc-field-deconstruction.R | 4 R/other-code-translations.R | 4 R/special-attributes.R | 2 R/the-web.R | 10 R/utilities.R | 14 R/worldcat-api.R | 36 - README.md | 6 build/vignette.rds |binary inst/doc/using-the-worldcat-search-api.html | 687 +++++++++++++++++++++++----- man/get_dewey_decimal_subject_class.Rd | 6 man/get_dewey_decimal_subject_division.Rd | 6 man/get_dewey_decimal_subject_section.Rd | 6 man/worldcat_api_classify_by.Rd | 8 tests/testthat/test-bibcodes.R | 1 19 files changed, 689 insertions(+), 218 deletions(-)
Title: Use Interlinear Glosses in R Markdown
Description: Read examples with interlinear glosses from files
or from text and print them in a way compatible with both
Latex and HTML outputs.
Author: Mariana Montes [aut, cre] ,
Benjamin Chauvette [cph]
Maintainer: Mariana Montes <montesmariana@gmail.com>
Diff between glossr versions 0.5.1 dated 2022-06-08 and 0.6.0 dated 2022-08-18
glossr-0.5.1/glossr/man/check_packages.Rd |only glossr-0.5.1/glossr/man/format_html.Rd |only glossr-0.5.1/glossr/man/format_pdf.Rd |only glossr-0.5.1/glossr/man/format_word.Rd |only glossr-0.5.1/glossr/man/gloss_linesplit.Rd |only glossr-0.5.1/glossr/man/gloss_table.Rd |only glossr-0.5.1/glossr/man/gloss_word_lines.Rd |only glossr-0.5.1/glossr/man/latex_tag.Rd |only glossr-0.5.1/glossr/man/leipzig_script.Rd |only glossr-0.5.1/glossr/man/new_gloss_data.Rd |only glossr-0.5.1/glossr/man/parse_latex.Rd |only glossr-0.5.1/glossr/man/reset_max.Rd |only glossr-0.5.1/glossr/man/sc_to_upper.Rd |only glossr-0.5.1/glossr/man/set_default.Rd |only glossr-0.5.1/glossr/man/style_options.Rd |only glossr-0.5.1/glossr/man/tooltip.Rd |only glossr-0.5.1/glossr/man/use_leipzig.Rd |only glossr-0.5.1/glossr/man/use_tooltip.Rd |only glossr-0.5.1/glossr/man/validate_output.Rd |only glossr-0.5.1/glossr/man/word_knitr.Rd |only glossr-0.6.0/glossr/DESCRIPTION | 10 glossr-0.6.0/glossr/MD5 | 102 glossr-0.6.0/glossr/NAMESPACE | 9 glossr-0.6.0/glossr/NEWS.md | 8 glossr-0.6.0/glossr/R/data.R | 4 glossr-0.6.0/glossr/R/gloss.R | 75 glossr-0.6.0/glossr/R/gloss_render.R | 77 glossr-0.6.0/glossr/R/glossr-package.R | 63 glossr-0.6.0/glossr/R/html_utils.R | 21 glossr-0.6.0/glossr/R/markdown.R | 147 glossr-0.6.0/glossr/R/pdf_utils.R | 30 glossr-0.6.0/glossr/R/tooltip.R | 8 glossr-0.6.0/glossr/R/utils-pipe.R | 28 glossr-0.6.0/glossr/R/utils.R | 24 glossr-0.6.0/glossr/R/word_utils.R | 43 glossr-0.6.0/glossr/README.md | 8 glossr-0.6.0/glossr/build/vignette.rds |binary glossr-0.6.0/glossr/inst/REFERENCES.bib |58350 ++++++++--------- glossr-0.6.0/glossr/inst/doc/gloss_factory.R |only glossr-0.6.0/glossr/inst/doc/gloss_factory.Rmd |only glossr-0.6.0/glossr/inst/doc/gloss_factory.html |only glossr-0.6.0/glossr/inst/doc/glossr.html | 4 glossr-0.6.0/glossr/inst/doc/glossr_how.Rmd | 8 glossr-0.6.0/glossr/inst/doc/glossr_how.html | 59 glossr-0.6.0/glossr/inst/doc/styling.html | 17 glossr-0.6.0/glossr/man/as_gloss.Rd | 30 glossr-0.6.0/glossr/man/gloss.Rd | 40 glossr-0.6.0/glossr/man/gloss_data.Rd |only glossr-0.6.0/glossr/man/gloss_df.Rd | 12 glossr-0.6.0/glossr/man/gloss_factory.Rd |only glossr-0.6.0/glossr/man/gloss_format_words.Rd | 2 glossr-0.6.0/glossr/man/gloss_linetooltip.Rd | 2 glossr-0.6.0/glossr/man/gloss_list.Rd | 8 glossr-0.6.0/glossr/man/gloss_render.Rd | 32 glossr-0.6.0/glossr/man/glosses.Rd | 52 glossr-0.6.0/glossr/man/glossr-package.Rd | 58 glossr-0.6.0/glossr/man/knit_print.gloss.Rd | 32 glossr-0.6.0/glossr/man/new_gloss.Rd | 8 glossr-0.6.0/glossr/man/pipe.Rd | 40 glossr-0.6.0/glossr/man/set_style_options.Rd | 26 glossr-0.6.0/glossr/tests/testthat.R | 8 glossr-0.6.0/glossr/tests/testthat/test-gloss_render.R | 13 glossr-0.6.0/glossr/tests/testthat/test-pdf_utils.R | 11 glossr-0.6.0/glossr/vignettes/gloss_factory.Rmd |only glossr-0.6.0/glossr/vignettes/glossr_how.Rmd | 8 65 files changed, 29818 insertions(+), 29659 deletions(-)
Title: Talking to 'Docker' and 'Singularity' Containers
Description: Provides a unified interface to interact with
'docker' and 'singularity' containers. You can execute a command
inside a container, mount a volume or copy a file.
Author: Robrecht Cannoodt [aut, cre] ,
Wouter Saelens [aut] ,
Joel Nitta [aut]
Maintainer: Robrecht Cannoodt <rcannood@gmail.com>
Diff between babelwhale versions 1.0.3 dated 2021-06-25 and 1.1.0 dated 2022-08-18
DESCRIPTION | 21 ++++++++++++++------- MD5 | 11 +++++++---- NAMESPACE | 1 + NEWS.md | 4 ++++ R/run_auto_mount.R |only README.md | 25 +++++++++---------------- man/run_auto_mount.Rd |only tests/testthat/test-run_auto_mount.R |only 8 files changed, 35 insertions(+), 27 deletions(-)
Title: Single-Cell Decomposition using Hierarchical Autoencoder
Description: Provides a fast and accurate pipeline for single-cell analyses.
The 'scDHA' software package can perform clustering, dimension reduction and visualization, classification, and time-trajectory inference on single-cell data (Tran et.al. (2021) <DOI:10.1038/s41467-021-21312-2>).
Author: Duc Tran [aut, cre],
Tin Nguyen [fnd]
Maintainer: Duc Tran <duct@nevada.unr.edu>
Diff between scDHA versions 1.1.2 dated 2021-09-15 and 1.2.0 dated 2022-08-18
scDHA-1.1.2/scDHA/man/scDHA.w.Rd |only scDHA-1.2.0/scDHA/DESCRIPTION | 8 scDHA-1.2.0/scDHA/MD5 | 25 - scDHA-1.2.0/scDHA/NAMESPACE | 3 scDHA-1.2.0/scDHA/NEWS.md | 3 scDHA-1.2.0/scDHA/R/Analysis.R | 39 +- scDHA-1.2.0/scDHA/R/Support.R | 80 ++--- scDHA-1.2.0/scDHA/R/TorchSupport.R | 18 - scDHA-1.2.0/scDHA/R/scDHA.R | 385 +++++--------------------- scDHA-1.2.0/scDHA/R/wMetaC.R | 265 +++++++---------- scDHA-1.2.0/scDHA/README.md | 17 - scDHA-1.2.0/scDHA/src/RcppExports.cpp | 4 scDHA-1.2.0/scDHA/src/Support.cpp | 16 - scDHA-1.2.0/scDHA/tests/testthat/test-scDHA.R | 15 - 14 files changed, 314 insertions(+), 564 deletions(-)
Title: Brazilian Population Estimatives
Description: Datasets with yearly (2000 to 2021) Brazilian population estimates from DataSUS/Brazilian Health Ministry, aggregated by state, municipality, sex, and age groups. The data in this package is manually downloaded from the DataSUS website (<http://tabnet.datasus.gov.br/cgi/deftohtm.exe?popsvs/cnv/popbr.def>) and converted to tibbles.
Author: Raphael Saldanha [aut, cre]
Maintainer: Raphael Saldanha <raphael.saldanha@icict.fiocruz.br>
Diff between brpop versions 0.1.0 dated 2022-07-06 and 0.1.5 dated 2022-08-18
DESCRIPTION | 11 +++--- MD5 | 47 +++++++++++++++++++++++------ NAMESPACE | 12 +++++++ NEWS.md | 20 ++++++++++++ R/mun_female_pop_totals.R |only R/mun_male_pop_totals.R |only R/mun_pop.R | 5 +++ R/mun_pop_totals.R |only R/mun_reg_saude.R |only R/regsaude_female_pop.R |only R/regsaude_female_pop_totals.R |only R/regsaude_male_pop.R |only R/regsaude_male_pop_totals.R |only R/regsaude_pop.R |only R/regsaude_pop_totals.R |only R/uf_female_pop_totals.R |only R/uf_male_pop_totals.R |only R/uf_pop.R | 5 +++ R/uf_pop_totals.R |only README.md | 60 ++++++++++++++++++++++++++++++++++++-- data/mun_female_pop.rda |binary data/mun_male_pop.rda |binary data/mun_reg_saude.rda |only data/uf_female_pop.rda |binary data/uf_male_pop.rda |binary man/mun_female_pop_totals.Rd |only man/mun_male_pop_totals.Rd |only man/mun_pop_totals.Rd |only man/mun_reg_saude.Rd |only man/regsaude_female_pop.Rd |only man/regsaude_female_pop_totals.Rd |only man/regsaude_male_pop.Rd |only man/regsaude_male_pop_totals.Rd |only man/regsaude_pop.Rd |only man/regsaude_pop_totals.Rd |only man/uf_female_pop_totals.Rd |only man/uf_male_pop_totals.Rd |only man/uf_pop_totals.Rd |only 38 files changed, 143 insertions(+), 17 deletions(-)
Title: Modeling and Map Production using Random Forest and Related
Stochastic Models
Description: Creates sophisticated models of training data and validates the models with an independent test set, cross validation, or Out Of Bag (OOB) predictions on the training data. Create graphs and tables of the model validation results. Applies these models to GIS .img files of predictors to create detailed prediction surfaces. Handles large predictor files for map making, by reading in the .img files in chunks, and output to the .txt file the prediction for each data chunk, before reading the next chunk of data.
Author: Elizabeth Freeman, Tracey Frescino
Maintainer: Elizabeth Freeman <eafreeman@fs.fed.us>
Diff between ModelMap versions 3.4.0.1 dated 2018-09-11 and 3.4.0.2 dated 2022-08-18
DESCRIPTION | 8 ++++---- MD5 | 36 ++++++++++++++++++------------------ build/vignette.rds |binary inst/CHANGELOG | 6 +++++- inst/doc/ExploreModelMap.R | 1 - inst/doc/ExploreModelMap.pdf |binary inst/doc/VModelMap.R | 1 - inst/doc/VModelMap.pdf |binary inst/doc/Vquantile.R | 1 - inst/doc/Vquantile.pdf |binary man/ModelMap-package.Rd | 4 ++-- man/build.rastLUT.Rd | 3 ++- man/get.test.Rd | 3 ++- man/model.build.Rd | 3 ++- man/model.diagnostics.Rd | 6 ++++++ man/model.explore.Rd | 12 +++--------- man/model.importance.plot.Rd | 6 ++++-- man/model.interaction.plot.Rd | 7 +++++-- man/model.mapmake.Rd | 4 +++- 19 files changed, 56 insertions(+), 45 deletions(-)
Title: GeoServer REST API R Interface
Description: Provides an R interface to the GeoServer REST API, allowing to upload
and publish data in a GeoServer web-application and expose data to OGC Web-Services.
The package currently supports all CRUD (Create,Read,Update,Delete) operations
on GeoServer workspaces, namespaces, datastores (stores of vector data), featuretypes,
layers, styles, as well as vector data upload operations. For more information about
the GeoServer REST API, see <https://docs.geoserver.org/stable/en/user/rest/>.
Author: Emmanuel Blondel [aut, cre]
Maintainer: Emmanuel Blondel <emmanuel.blondel1@gmail.com>
Diff between geosapi versions 0.6-3 dated 2022-06-17 and 0.6-4 dated 2022-08-18
DESCRIPTION | 10 - MD5 | 98 +++++++++--------- NEWS.md | 14 ++ R/GSDatastoreManager.R | 4 README.md | 2 man/GSAbstractCoverageStore.Rd | 48 ++++----- man/GSAbstractDBDataStore.Rd | 172 ++++++++++++++++----------------- man/GSAbstractDataStore.Rd | 66 ++++++------ man/GSAbstractStore.Rd | 54 +++++----- man/GSArcGridCoverageStore.Rd | 36 +++--- man/GSCoverage.Rd | 88 ++++++++-------- man/GSCoverageBand.Rd | 72 ++++++------- man/GSCoverageStoreManager.Rd | 158 +++++++++++++++--------------- man/GSCoverageView.Rd | 72 ++++++------- man/GSDataStoreManager.Rd | 182 +++++++++++++++++------------------ man/GSDimension.Rd | 60 +++++------ man/GSFeatureDimension.Rd | 56 +++++----- man/GSFeatureType.Rd | 94 +++++++++--------- man/GSGeoPackageDataStore.Rd | 84 ++++++++-------- man/GSGeoTIFFCoverageStore.Rd | 36 +++--- man/GSImageMosaicCoverageStore.Rd | 36 +++--- man/GSInputCoverageBand.Rd | 44 ++++---- man/GSLayer.Rd | 140 +++++++++++++------------- man/GSLayerGroup.Rd | 120 +++++++++++------------ man/GSLayerManager.Rd | 128 ++++++++++++------------ man/GSManager.Rd | 108 ++++++++++---------- man/GSMetadataLink.Rd | 54 +++++----- man/GSNamespace.Rd | 32 +++--- man/GSNamespaceManager.Rd | 92 ++++++++--------- man/GSOracleNGDataStore.Rd | 84 ++++++++-------- man/GSPostGISDataStore.Rd | 84 ++++++++-------- man/GSPublishable.Rd | 44 ++++---- man/GSRESTEntrySet.Rd | 60 +++++------ man/GSRESTResource.Rd | 24 ++-- man/GSResource.Rd | 156 +++++++++++++++--------------- man/GSServiceManager.Rd | 152 ++++++++++++++--------------- man/GSServiceSettings.Rd | 102 +++++++++---------- man/GSShapefileDataStore.Rd | 82 +++++++-------- man/GSShapefileDirectoryDataStore.Rd | 82 +++++++-------- man/GSShinyMonitor.Rd | 24 ++-- man/GSStyleManager.Rd | 104 ++++++++++---------- man/GSUtils.Rd | 6 - man/GSVersion.Rd | 30 ++--- man/GSVirtualTable.Rd | 78 +++++++-------- man/GSVirtualTableGeometry.Rd | 32 +++--- man/GSVirtualTableParameter.Rd | 32 +++--- man/GSWorkspace.Rd | 32 +++--- man/GSWorkspaceManager.Rd | 116 +++++++++++----------- man/GSWorkspaceSettings.Rd | 72 ++++++------- man/GSWorldImageCoverageStore.Rd | 36 +++--- 50 files changed, 1801 insertions(+), 1791 deletions(-)
Title: Synthetic Microdata and Spatial MicroSimulation Modeling for ACS
Data
Description: Provides access to curated American Community Survey (ACS) base tables via a wrapper
to library(acs). Builds synthetic micro-datasets at any user-specified geographic level with
ten default attributes; and, conducts spatial microsimulation modeling (SMSM) via simulated
annealing. SMSM is conducted in parallel by default. Lastly, we provide functionality for
data-extensibility of micro-datasets.
Author: Alex Whitworth [aut, cre]
Maintainer: Alex Whitworth <whitworth.alex@gmail.com>
Diff between synthACS versions 1.6.2 dated 2022-07-07 and 1.7.0 dated 2022-08-18
synthACS-1.6.2/synthACS/inst/doc/jss_synthACS.pdf |only synthACS-1.6.2/synthACS/inst/doc/jss_synthACS.tex.rsp |only synthACS-1.6.2/synthACS/tests/testdata/dat-testmacro.rds |only synthACS-1.6.2/synthACS/vignettes/jss_synthACS.tex.rsp |only synthACS-1.7.0/synthACS/DESCRIPTION | 14 - synthACS-1.7.0/synthACS/MD5 | 40 +- synthACS-1.7.0/synthACS/R/a_class-methods_helpers.R | 8 synthACS-1.7.0/synthACS/R/a_internal-functional_helpers.R | 60 +++- synthACS-1.7.0/synthACS/R/sim_anneal_wrappers.R | 6 synthACS-1.7.0/synthACS/R/sim_annealing.R | 25 + synthACS-1.7.0/synthACS/build/vignette.rds |binary synthACS-1.7.0/synthACS/inst/doc/split_combine.R |only synthACS-1.7.0/synthACS/inst/doc/split_combine.Rmd |only synthACS-1.7.0/synthACS/inst/doc/split_combine.html |only synthACS-1.7.0/synthACS/tests/testdata/dat-cadat.rds |binary synthACS-1.7.0/synthACS/tests/testdata/dat-towork.rds |binary synthACS-1.7.0/synthACS/tests/testthat.R | 20 + synthACS-1.7.0/synthACS/tests/testthat/local-class_synthACS_methods.R | 6 synthACS-1.7.0/synthACS/tests/testthat/local-combine_smsm.R | 19 - synthACS-1.7.0/synthACS/tests/testthat/local-derive_synthetic.R | 26 + synthACS-1.7.0/synthACS/tests/testthat/local-sim_anneal.R | 136 +++++----- synthACS-1.7.0/synthACS/tests/testthat/local-sim_anneal_parallel.R | 16 - synthACS-1.7.0/synthACS/tests/testthat/setup-testdata.R | 13 synthACS-1.7.0/synthACS/vignettes/jss_synthACS.lty |only synthACS-1.7.0/synthACS/vignettes/split_combine.Rmd |only synthACS-1.7.0/synthACS/vignettes/split_ref.bib |only 26 files changed, 239 insertions(+), 150 deletions(-)
Title: Analysis of Oceanographic Data
Description: Supports the analysis of Oceanographic data, including 'ADCP'
measurements, measurements made with 'argo' floats, 'CTD' measurements,
sectional data, sea-level time series, coastline and topographic data, etc.
Provides specialized functions for calculating seawater properties such as
potential temperature in either the 'UNESCO' or 'TEOS-10' equation of state.
Produces graphical displays that conform to the conventions of the
Oceanographic literature. This package is discussed extensively by
Kelley (2018) "Oceanographic Analysis with R" <doi:10.1007/978-1-4939-8844-0>.
Author: Dan Kelley [aut, cre] ,
Clark Richards [aut] ,
Chantelle Layton [ctb]
coauthor),
British Geological Survey [ctb, cph]
Maintainer: Dan Kelley <Dan.Kelley@Dal.Ca>
Diff between oce versions 1.7-8 dated 2022-07-05 and 1.7-10 dated 2022-08-18
oce-1.7-10/oce/DESCRIPTION | 8 oce-1.7-10/oce/MD5 | 218 +- oce-1.7-10/oce/NAMESPACE | 789 ++++---- oce-1.7-10/oce/NEWS.md | 684 +++---- oce-1.7-10/oce/R/AllClass.R | 135 - oce-1.7-10/oce/R/RcppExports.R | 4 oce-1.7-10/oce/R/adp.R | 926 +++++----- oce-1.7-10/oce/R/adp.nortek.R | 2006 +--------------------- oce-1.7-10/oce/R/adp.nortek.ad2cp.R |only oce-1.7-10/oce/R/adp.rdi.R | 95 - oce-1.7-10/oce/R/adp.sontek.R | 2 oce-1.7-10/oce/R/adv.R | 6 oce-1.7-10/oce/R/argo.R | 105 - oce-1.7-10/oce/R/bremen.R | 2 oce-1.7-10/oce/R/cm.R | 2 oce-1.7-10/oce/R/coastline.R | 8 oce-1.7-10/oce/R/ctd.R | 8 oce-1.7-10/oce/R/ctd.aml.R | 2 oce-1.7-10/oce/R/ctd.itp.R | 2 oce-1.7-10/oce/R/ctd.odv.R | 2 oce-1.7-10/oce/R/ctd.sbe.R | 310 +-- oce-1.7-10/oce/R/ctd.ssda.R | 10 oce-1.7-10/oce/R/ctd.woce.R | 6 oce-1.7-10/oce/R/gps.R | 2 oce-1.7-10/oce/R/index.R | 2 oce-1.7-10/oce/R/landsat.R | 2 oce-1.7-10/oce/R/met.R | 12 oce-1.7-10/oce/R/misc.R | 137 - oce-1.7-10/oce/R/oce.R | 110 - oce-1.7-10/oce/R/odf.R | 2 oce-1.7-10/oce/R/rsk.R | 50 oce-1.7-10/oce/R/sealevel.R | 6 oce-1.7-10/oce/R/section.R | 2 oce-1.7-10/oce/R/sw.R | 88 oce-1.7-10/oce/R/topo.R | 2 oce-1.7-10/oce/R/units.R | 10 oce-1.7-10/oce/R/xbt.R | 4 oce-1.7-10/oce/inst/WORDLIST | 3 oce-1.7-10/oce/inst/doc/A_oce.html | 4 oce-1.7-10/oce/inst/doc/B_ctd.html | 4 oce-1.7-10/oce/inst/doc/C_adp.html | 8 oce-1.7-10/oce/inst/doc/D_map_projections.html | 10 oce-1.7-10/oce/inst/doc/E_flags.html | 4 oce-1.7-10/oce/inst/doc/F_subclassing.html | 18 oce-1.7-10/oce/man/ad2cpCodeToName.Rd |only oce-1.7-10/oce/man/ad2cpHeaderValue.Rd | 48 oce-1.7-10/oce/man/adp-class.Rd | 3 oce-1.7-10/oce/man/adp.Rd | 3 oce-1.7-10/oce/man/adpAd2cpFileTrim.Rd |only oce-1.7-10/oce/man/adpConvertRawToNumeric.Rd | 3 oce-1.7-10/oce/man/adpEnsembleAverage.Rd | 3 oce-1.7-10/oce/man/adpFlagPastBoundary.Rd | 3 oce-1.7-10/oce/man/adpRdiFileTrim.Rd |only oce-1.7-10/oce/man/adp_rdi.000.Rd | 3 oce-1.7-10/oce/man/as.adp.Rd | 3 oce-1.7-10/oce/man/beamName.Rd | 3 oce-1.7-10/oce/man/beamToXyz.Rd | 3 oce-1.7-10/oce/man/beamToXyzAdp.Rd | 3 oce-1.7-10/oce/man/beamToXyzAdpAD2CP.Rd | 3 oce-1.7-10/oce/man/beamToXyzAdv.Rd | 5 oce-1.7-10/oce/man/beamUnspreadAdp.Rd | 3 oce-1.7-10/oce/man/binmapAdp.Rd | 3 oce-1.7-10/oce/man/cnvName2oceName.Rd | 2 oce-1.7-10/oce/man/coastlineWorld.Rd | 2 oce-1.7-10/oce/man/enuToOther.Rd | 3 oce-1.7-10/oce/man/enuToOtherAdp.Rd | 3 oce-1.7-10/oce/man/handleFlags-adp-method.Rd | 3 oce-1.7-10/oce/man/is.ad2cp.Rd | 17 oce-1.7-10/oce/man/oce-deprecated.Rd | 7 oce-1.7-10/oce/man/oceFileTrim.Rd |only oce-1.7-10/oce/man/plot-adp-method.Rd | 8 oce-1.7-10/oce/man/plotAD2CP.Rd |only oce-1.7-10/oce/man/read.adp.Rd | 14 oce-1.7-10/oce/man/read.adp.ad2cp.Rd | 272 ++ oce-1.7-10/oce/man/read.adp.nortek.Rd | 14 oce-1.7-10/oce/man/read.adp.rdi.Rd | 20 oce-1.7-10/oce/man/read.adp.sontek.Rd | 14 oce-1.7-10/oce/man/read.adp.sontek.serial.Rd | 14 oce-1.7-10/oce/man/read.aquadopp.Rd | 14 oce-1.7-10/oce/man/read.aquadoppHR.Rd | 14 oce-1.7-10/oce/man/read.aquadoppProfiler.Rd | 14 oce-1.7-10/oce/man/read.ctd.ssda.Rd | 6 oce-1.7-10/oce/man/rotateAboutZ.Rd | 3 oce-1.7-10/oce/man/setFlags-adp-method.Rd | 3 oce-1.7-10/oce/man/sub-sub-adp-method.Rd | 15 oce-1.7-10/oce/man/sub-subset-adp-method.Rd | 3 oce-1.7-10/oce/man/subset-adp-method.Rd | 3 oce-1.7-10/oce/man/subtractBottomVelocity.Rd | 3 oce-1.7-10/oce/man/summary-adp-method.Rd | 3 oce-1.7-10/oce/man/swRho.Rd | 2 oce-1.7-10/oce/man/swSpecificHeat.Rd | 2 oce-1.7-10/oce/man/swTFreeze.Rd | 43 oce-1.7-10/oce/man/swThermalConductivity.Rd | 4 oce-1.7-10/oce/man/toEnu.Rd | 3 oce-1.7-10/oce/man/toEnuAdp.Rd | 7 oce-1.7-10/oce/man/toEnuAdv.Rd | 2 oce-1.7-10/oce/man/trimString.Rd | 7 oce-1.7-10/oce/man/vectorShow.Rd | 2 oce-1.7-10/oce/man/velocityStatistics.Rd | 3 oce-1.7-10/oce/man/xyzToEnu.Rd | 3 oce-1.7-10/oce/man/xyzToEnuAdp.Rd | 3 oce-1.7-10/oce/man/xyzToEnuAdpAD2CP.Rd | 3 oce-1.7-10/oce/man/xyzToEnuAdv.Rd | 2 oce-1.7-10/oce/src/RcppExports.cpp | 7 oce-1.7-10/oce/src/ldc_ad2cp_in_file.cpp | 380 ++-- oce-1.7-10/oce/src/registerDynamicSymbol.c | 4 oce-1.7-10/oce/tests/testthat/t_equilib.dat |only oce-1.7-10/oce/tests/testthat/test_ad2cp_1.R | 865 ++++----- oce-1.7-10/oce/tests/testthat/test_ad2cp_2.R | 189 -- oce-1.7-10/oce/tests/testthat/test_ad2cp_3.R |only oce-1.7-10/oce/tests/testthat/test_argo.R | 31 oce-1.7-10/oce/tests/testthat/test_ctd_ssda.R | 38 oce-1.7-10/oce/tests/testthat/test_hydrographic.R | 12 oce-1.7-8/oce/inst/extdata/ctd_ssda.csv |only oce-1.7-8/oce/man/renameData.Rd |only 115 files changed, 3454 insertions(+), 4534 deletions(-)
Title: Visualization Package for CanvasXpress in R
Description: Enables creation of visualizations using the CanvasXpress framework
in R. CanvasXpress is a standalone JavaScript library for reproducible research
with complete tracking of data and end-user modifications stored in a single
PNG image that can be played back. See <https://www.canvasxpress.org> for more
information.
Author: Isaac Neuhaus [aut],
Connie Brett [aut, cre]
Maintainer: Connie Brett <connie@aggregate-genius.com>
Diff between canvasXpress versions 1.37.4 dated 2022-02-09 and 1.39.8 dated 2022-08-18
DESCRIPTION | 11 MD5 | 53 NEWS.md | 4 R/canvasXpress.R | 13 R/ggplot_as_list.R |only R/internal_functionality.R | 11 build/vignette.rds |binary inst/doc/additional_examples.html | 294 ++++ inst/doc/getting_started.html | 252 +++- inst/htmlwidgets/canvasXpress.js | 21 inst/htmlwidgets/canvasXpress.yaml | 2 inst/htmlwidgets/lib/canvasXpress/canvasXpress.css | 1106 ++++++++++++++++-- inst/htmlwidgets/lib/canvasXpress/canvasXpress.min.js | 145 -- inst/shiny-examples/example2/server.R | 4 inst/shiny-examples/example2/ui.R | 1 inst/ui-examples/cX-function.R.gz |binary tests/testthat/setup.R | 2 tests/testthat/test-ggplot.R |only tests/testthat/test-other-decorations.R | 155 ++ tests/testthat/test-other-logical-groups.R |only tests/testthat/test-other-network-localfile.R | 4 tests/testthat/test-other-segregation-title.R | 1 tests/testthat/test-ui-bar.R | 2 tests/testthat/test-ui-genome.R | 6 tests/testthat/test-ui-heatmap.R | 1 tests/testthat/test-ui-hexplotbinplot.R |only tests/testthat/test-ui-histogram.R | 4 tests/testthat/test-ui-line.R | 8 tests/testthat/test-ui-linearfit.R |only tests/testthat/test-ui-network.R | 14 30 files changed, 1775 insertions(+), 339 deletions(-)
Title: Sub-National Geospatial Data Archive: Geoprocessing Toolkit
Description: Tools for integrating spatially-misaligned GIS datasets. Part of the Sub-National Geospatial Data Archive System.
Author: Jason Byers, Marty Davidson, Yuri M. Zhukov
Maintainer: Yuri M. Zhukov <zhukov@umich.edu>
Diff between SUNGEO versions 0.2.291 dated 2022-08-10 and 0.2.292 dated 2022-08-18
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- R/nesting.R | 32 +++++++++++++++++++++++++++++--- README.md | 2 +- man/nesting.Rd | 2 ++ 5 files changed, 40 insertions(+), 12 deletions(-)
Title: Hierarchical Derivative Curve Estimation
Description: A procedure that fits derivative curves based on a sequence of quotient differences. In a hierarchical setting the package produces estimates of subject-specific and group-specific derivative curves. In a non-hierarchical setting the package produces a single derivative curve.
Author: Garritt L. Page [aut, cre],
Maria Xose Rodriguez-Alvarez [aut],
Dae-Jin Lee [ctb],
S. McKay Curtis [ctb],
Radford M. Neal Neal [ctb]
Maintainer: Garritt L. Page <page@stat.byu.edu>
Diff between HDCurves versions 0.1.0 dated 2020-02-11 and 0.1.1 dated 2022-08-18
DESCRIPTION | 6 +++--- MD5 | 10 ++++++---- NAMESPACE | 1 + R/Functions.R | 17 +++++++++++++++++ man/emp_deriv.Rd |only src/emp.deriv.c |only src/init.c | 3 +++ 7 files changed, 30 insertions(+), 7 deletions(-)
Title: Adjacency-Constrained Clustering of a Block-Diagonal Similarity
Matrix
Description: Implements a constrained version of hierarchical agglomerative
clustering, in which each observation is associated to a position, and only
adjacent clusters can be merged. Typical application fields in
bioinformatics include Genome-Wide Association Studies or Hi-C data
analysis, where the similarity between items is a decreasing function of
their genomic distance. Taking advantage of this feature, the implemented
algorithm is time and memory efficient. This algorithm is described in
Ambroise et al (2019)
<https://almob.biomedcentral.com/articles/10.1186/s13015-019-0157-4>.
Author: Christophe Ambroise [aut],
Shubham Chaturvedi [aut],
Alia Dehman [aut],
Pierre Neuvial [aut, cre],
Guillem Rigaill [aut],
Nathalie Vialaneix [aut],
Gabriel Hoffman [aut]
Maintainer: Pierre Neuvial <pierre.neuvial@math.univ-toulouse.fr>
Diff between adjclust versions 0.6.4 dated 2022-03-31 and 0.6.5 dated 2022-08-18
DESCRIPTION | 17 - MD5 | 16 - NEWS.md | 4 R/chac.R | 3 R/plotSim.R | 3 build/vignette.rds |binary inst/doc/hicClust.html | 374 +++++++++++++++++++++++++++++------- inst/doc/notesCHAC.html | 497 ++++++++++++++++++++++++++++++++++++++++-------- inst/doc/snpClust.html | 386 ++++++++++++++++++++++++++++++------- 9 files changed, 1067 insertions(+), 233 deletions(-)
Title: Develop a 'Telegram Bot' with R
Description: Provides a pure interface for the 'Telegram Bot API'
<http://core.telegram.org/bots/api>. In addition to the pure API
implementation, it features a number of tools to make the development of
'Telegram' bots with R easy and straightforward, providing an easy-to-use
interface that takes some work off the programmer.
Author: Ernest Benedito [aut, cre]
Maintainer: Ernest Benedito <ebeneditos@gmail.com>
Diff between telegram.bot versions 2.4.0 dated 2019-10-19 and 2.4.1 dated 2022-08-18
DESCRIPTION | 13 MD5 | 216 - NAMESPACE | 92 NEWS.md | 168 - R/base.R | 216 - R/basefilter.R | 158 - R/bot.R | 3548 ++++++++++++------------ R/callbackqueryhandler.R | 122 R/commandhandler.R | 258 - R/dispatcher.R | 330 +- R/errorhandler.R | 98 R/filters.R | 122 R/handler.R | 284 - R/inlinequeryresult.R | 102 R/messagehandler.R | 166 - R/replymarkup.R | 714 ++-- R/telegram.bot-package.R | 100 R/update.R | 428 +- R/updater.R | 482 +-- R/utils.R | 172 - README.md | 353 +- build/vignette.rds |binary inst/doc/telegrambot-advanced-filters.R | 82 inst/doc/telegrambot-advanced-filters.Rmd | 210 - inst/doc/telegrambot-advanced-filters.html | 831 ++--- inst/doc/telegrambot-basic-functionalities.R | 90 inst/doc/telegrambot-basic-functionalities.Rmd | 204 - inst/doc/telegrambot-basic-functionalities.html | 844 +++-- inst/doc/telegrambot-building-a-bot.R | 66 inst/doc/telegrambot-building-a-bot.Rmd | 206 - inst/doc/telegrambot-building-a-bot.html | 820 +++-- inst/doc/telegrambot-introduction.R | 160 - inst/doc/telegrambot-introduction.Rmd | 360 +- inst/doc/telegrambot-introduction.html | 1003 +++--- inst/doc/telegrambot-set-a-proxy.R | 24 inst/doc/telegrambot-set-a-proxy.Rmd | 62 inst/doc/telegrambot-set-a-proxy.html | 701 ++-- inst/doc/telegrambot-the-add-operator.R | 100 inst/doc/telegrambot-the-add-operator.Rmd | 190 - inst/doc/telegrambot-the-add-operator.html | 788 ++--- man/BaseFilter.Rd | 86 man/Bot.Rd | 185 - man/CallbackQueryHandler.Rd | 42 man/CommandHandler.Rd | 109 man/Dispatcher.Rd | 62 man/ErrorHandler.Rd | 76 man/ForceReply.Rd | 66 man/Handler.Rd | 174 - man/InlineKeyboardButton.Rd | 99 man/InlineKeyboardMarkup.Rd | 124 man/InlineQueryResult.Rd | 88 man/KeyboardButton.Rd | 70 man/MessageFilters.Rd | 96 man/MessageHandler.Rd | 68 man/ReplyKeyboardMarkup.Rd | 112 man/ReplyKeyboardRemove.Rd | 110 man/TelegramObject-add.Rd | 126 man/TelegramObject.Rd | 63 man/Update.Rd | 74 man/Updater.Rd | 177 - man/add_error_handler.Rd | 70 man/add_handler.Rd | 66 man/answerCallbackQuery.Rd | 71 man/answerInlineQuery.Rd | 124 man/bot_token.Rd | 54 man/check_update.Rd | 32 man/clean_updates.Rd | 24 man/deleteMessage.Rd | 54 man/deleteWebhook.Rd | 30 man/editMessageCaption.Rd | 89 man/editMessageReplyMarkup.Rd | 74 man/editMessageText.Rd | 96 man/effective_chat.Rd | 28 man/effective_message.Rd | 28 man/effective_user.Rd | 24 man/filtersLogic.Rd | 66 man/forwardMessage.Rd | 53 man/from_chat_id.Rd | 22 man/from_user_id.Rd | 22 man/getFile.Rd | 82 man/getMe.Rd | 28 man/getUpdates.Rd | 107 man/getUserProfilePhotos.Rd | 66 man/getWebhookInfo.Rd | 34 man/handle_update.Rd | 44 man/leaveChat.Rd | 36 man/sendAnimation.Rd | 138 man/sendAudio.Rd | 143 man/sendChatAction.Rd | 92 man/sendDocument.Rd | 131 man/sendLocation.Rd | 104 man/sendMessage.Rd | 118 man/sendPhoto.Rd | 123 man/sendSticker.Rd | 105 man/sendVideo.Rd | 145 man/sendVideoNote.Rd | 116 man/sendVoice.Rd | 131 man/setWebhook.Rd | 102 man/set_token.Rd | 28 man/start_polling.Rd | 92 man/stop_polling.Rd | 60 man/telegram.bot.Rd | 122 man/user_id.Rd | 54 vignettes/telegrambot-advanced-filters.Rmd | 210 - vignettes/telegrambot-basic-functionalities.Rmd | 204 - vignettes/telegrambot-building-a-bot.Rmd | 206 - vignettes/telegrambot-introduction.Rmd | 360 +- vignettes/telegrambot-set-a-proxy.Rmd | 62 vignettes/telegrambot-the-add-operator.Rmd | 190 - 109 files changed, 10950 insertions(+), 10400 deletions(-)
Title: Network-Based Regularization for Generalized Linear Models
Description: Network-based regularization has achieved success in variable selection for
high-dimensional biological data due to its ability to incorporate correlations among
genomic features. This package provides procedures of network-based variable selection
for generalized linear models (Ren et al. (2017) <doi:10.1186/s12863-017-0495-5> and
Ren et al.(2019) <doi:10.1002/gepi.22194>). Continuous, binary, and survival response
are supported. Robust network-based methods are available for continuous and survival
responses.
Author: Jie Ren, Luann C. Jung, Yinhao Du, Cen Wu, Yu Jiang, Junhao Liu
Maintainer: Jie Ren <jieren@ksu.edu>
Diff between regnet versions 0.4.0 dated 2019-06-08 and 1.0.0 dated 2022-08-18
regnet-0.4.0/regnet/data/datalist |only regnet-0.4.0/regnet/src/NonRobust.cpp |only regnet-0.4.0/regnet/src/NonRobust.h |only regnet-0.4.0/regnet/src/Robust.cpp |only regnet-0.4.0/regnet/src/Robust.h |only regnet-0.4.0/regnet/src/SurvCD.cpp |only regnet-0.4.0/regnet/src/SurvCD.h |only regnet-1.0.0/regnet/DESCRIPTION | 20 +- regnet-1.0.0/regnet/MD5 | 99 ++++++------ regnet-1.0.0/regnet/NAMESPACE | 2 regnet-1.0.0/regnet/NEWS.md | 5 regnet-1.0.0/regnet/R/ContCD.R | 42 +++-- regnet-1.0.0/regnet/R/ContCV.R | 66 +++++--- regnet-1.0.0/regnet/R/LogitCD.R | 21 +- regnet-1.0.0/regnet/R/LogitCV.R | 80 +++++++-- regnet-1.0.0/regnet/R/RcppExports.R | 40 +--- regnet-1.0.0/regnet/R/SurvCD.R | 37 ++-- regnet-1.0.0/regnet/R/SurvCV.R | 94 +++++++---- regnet-1.0.0/regnet/R/Utilities.R | 10 - regnet-1.0.0/regnet/R/cv.regnet.R | 98 ++++++------ regnet-1.0.0/regnet/R/example.R | 14 + regnet-1.0.0/regnet/R/plot.regnet.R |only regnet-1.0.0/regnet/R/print.regnet.R | 32 +++ regnet-1.0.0/regnet/R/regnet-package.R | 39 ++-- regnet-1.0.0/regnet/R/regnet.R | 85 ++++++---- regnet-1.0.0/regnet/README.md | 168 ++++++++++++-------- regnet-1.0.0/regnet/build |only regnet-1.0.0/regnet/data/ContExample.rda |only regnet-1.0.0/regnet/data/HeteroExample.rda |only regnet-1.0.0/regnet/man/cv.regnet.Rd | 62 ++++--- regnet-1.0.0/regnet/man/plot.regnet.Rd |only regnet-1.0.0/regnet/man/print.cv.regnet.Rd | 8 regnet-1.0.0/regnet/man/print.regnet.Rd |only regnet-1.0.0/regnet/man/regnet-package.Rd | 33 ++-- regnet-1.0.0/regnet/man/regnet.Rd | 64 ++++--- regnet-1.0.0/regnet/man/rgn.Rd | 17 +- regnet-1.0.0/regnet/src/ContCD.cpp | 48 +++-- regnet-1.0.0/regnet/src/ContCD.h | 8 regnet-1.0.0/regnet/src/ContGrid.cpp | 82 +++++++--- regnet-1.0.0/regnet/src/LogitCD.cpp | 32 +++ regnet-1.0.0/regnet/src/LogitCD.h | 9 - regnet-1.0.0/regnet/src/LogitGrid.cpp | 47 ++++- regnet-1.0.0/regnet/src/QR.cpp | 40 ++++ regnet-1.0.0/regnet/src/QR.h | 3 regnet-1.0.0/regnet/src/RcppExports.cpp | 234 ++++++++++++----------------- regnet-1.0.0/regnet/src/RobustCD.cpp |only regnet-1.0.0/regnet/src/RobustCD.h |only regnet-1.0.0/regnet/src/RunCont.cpp | 72 +++++++- regnet-1.0.0/regnet/src/RunCont.h | 6 regnet-1.0.0/regnet/src/RunLogistic.cpp | 17 +- regnet-1.0.0/regnet/src/RunLogistic.h | 2 regnet-1.0.0/regnet/src/RunSurv.cpp |only regnet-1.0.0/regnet/src/RunSurv.h |only regnet-1.0.0/regnet/src/SurvGrid.cpp | 96 ++++++----- regnet-1.0.0/regnet/src/Utilities.cpp | 40 ++++ regnet-1.0.0/regnet/src/Utilities.h | 12 - regnet-1.0.0/regnet/tests |only 57 files changed, 1174 insertions(+), 710 deletions(-)
Title: Distances on Directed Graphs
Description: Distances on dual-weighted directed graphs using
priority-queue shortest paths (Padgham (2019) <doi:10.32866/6945>).
Weighted directed graphs have weights from A to B which may differ
from those from B to A. Dual-weighted directed graphs have two sets
of such weights. A canonical example is a street network to be used
for routing in which routes are calculated by weighting distances
according to the type of way and mode of transport, yet lengths of
routes must be calculated from direct distances.
Author: Mark Padgham [aut, cre],
Andreas Petutschnig [aut],
David Cooley [aut],
Robin Lovelace [ctb],
Andrew Smith [ctb],
Malcolm Morgan [ctb],
Shane Saunders [cph]
Maintainer: Mark Padgham <mark.padgham@email.com>
Diff between dodgr versions 0.2.14 dated 2022-06-08 and 0.2.15 dated 2022-08-18
DESCRIPTION | 10 MD5 | 175 ++++---- NAMESPACE | 3 NEWS.md | 161 ++++++- R/RcppExports.R | 57 ++ R/cache.R | 31 - R/centrality.R | 189 +++++--- R/compare-heaps.R | 115 +++-- R/dists-categorical.R | 169 ++++--- R/dists.R | 285 ++++++++----- R/dodgr-package.R | 33 - R/dodgr-streetnet.R | 133 +++--- R/flowmap.R | 29 + R/flows.R | 223 +++++++--- R/fund-cycles.R | 210 +++++---- R/graph-contraction.R | 150 ++++--- R/graph-conversion.R | 71 ++- R/graph-functions-misc.R | 233 ++++------ R/graph-functions.R | 210 ++++++--- R/graph-merge.R | 29 - R/iso.R | 122 +++-- R/match-points.R |only R/paths.R | 95 ++-- R/save_load_streetnet.R | 18 R/times.R | 12 R/utils.R | 3 R/weight-streetnet-times.R | 315 +++++++++----- R/weight-streetnet.R | 486 ++++++++++++++-------- R/weighting_profiles.R | 18 README.md | 109 ++--- build/vignette.rds |binary inst/doc/dists-categorical.html | 14 inst/doc/dodgr.html | 130 ++---- inst/doc/flows.html | 10 inst/doc/times.html | 4 man/add_nodes_to_graph.Rd |only man/compare_heaps.Rd | 2 man/dodgr_centrality.Rd | 8 man/dodgr_distances.Rd | 16 man/dodgr_dists.Rd | 16 man/dodgr_dists_categorical.Rd | 3 man/dodgr_flowmap.Rd | 8 man/dodgr_flows_aggregate.Rd | 40 + man/dodgr_flows_disperse.Rd | 9 man/dodgr_flows_si.Rd | 15 man/dodgr_full_cycles.Rd | 2 man/dodgr_fundamental_cycles.Rd | 2 man/dodgr_insert_vertex.Rd | 5 man/dodgr_sample.Rd | 2 man/dodgr_sflines_to_poly.Rd | 2 man/dodgr_streetnet.Rd | 4 man/dodgr_streetnet_sc.Rd | 4 man/dodgr_times.Rd | 16 man/dodgr_to_sf.Rd | 2 man/dodgr_to_sfc.Rd | 2 man/dodgr_uncontract_graph.Rd | 3 man/dodgr_vertices.Rd | 2 man/hampi.Rd | 4 man/match_points_to_graph.Rd | 48 -- man/match_points_to_verts.Rd |only man/match_pts_to_graph.Rd | 54 +- man/match_pts_to_verts.Rd |only man/merge_directed_graph.Rd | 8 man/os_roads_bristol.Rd | 29 - man/summary.dodgr_dists_categorical.Rd | 2 man/weight_streetnet.Rd | 27 - man/write_dodgr_wt_profile.Rd | 2 src/Makevars | 2 src/Makevars.win | 2 src/RcppExports.cpp | 55 +- src/flows.cpp | 26 - src/match-points.cpp |only src/match-points.h |only src/run_sp.cpp | 80 +++ src/run_sp.h | 6 src/sf-as-network.cpp | 78 --- src/sf-as-network.h | 4 tests/testthat/test-cache.R | 196 +++++---- tests/testthat/test-centrality.R | 27 - tests/testthat/test-cycles.R | 126 +++-- tests/testthat/test-dists-categorical.R | 182 ++++---- tests/testthat/test-dists.R | 683 ++++++++++++++++---------------- tests/testthat/test-flows.R | 224 ++++++---- tests/testthat/test-graph-conversion.R | 23 - tests/testthat/test-graph-fns.R | 269 ++++-------- tests/testthat/test-iso.R | 238 ++++++----- tests/testthat/test-match-pts-fns.R |only tests/testthat/test-paths.R | 29 - tests/testthat/test-save-load.R | 21 tests/testthat/test-sc.R | 412 ++++++++++--------- tests/testthat/test-streetnet.R | 245 ++++++----- tests/testthat/test-wt-profiles.R | 203 +++++++-- 92 files changed, 4235 insertions(+), 3085 deletions(-)
Title: Seeing Convergence Concepts in Action
Description: This is a pedagogical package, designed to help students understanding convergence of
random variables. It provides a way to investigate interactively various modes of
convergence (in probability, almost surely, in law and in mean) of a sequence of i.i.d.
random variables. Visualisation of simulated sample paths is possible through interactive
plots. The approach is illustrated by examples and exercises through the function
'investigate', as described in
Lafaye de Micheaux and Liquet (2009) <doi:10.1198/tas.2009.0032>.
The user can study his/her own sequences of random variables.
Author: Pierre Lafaye De Micheaux [aut, cre],
Benoit Liquet [aut]
Maintainer: Pierre Lafaye De Micheaux <lafaye@unsw.edu.au>
Diff between ConvergenceConcepts versions 1.2.2 dated 2019-09-18 and 1.2.3 dated 2022-08-18
DESCRIPTION | 12 ++++++------ MD5 | 8 ++++---- inst/HISTORY | 7 +++++++ man/check-convergence.Rd | 2 +- man/criterion.Rd | 10 +++++----- 5 files changed, 23 insertions(+), 16 deletions(-)
More information about ConvergenceConcepts at CRAN
Permanent link
Title: Polygon and Path Transformations
Description: In order to smoothly animate the transformation of polygons and
paths, many aspects needs to be taken into account, such as differing number
of control points, changing center of rotation, etc. The 'transformr'
package provides an extensive framework for manipulating the shapes of
polygons and paths and can be seen as the spatial brother to the 'tweenr'
package.
Author: Thomas Lin Pedersen [cre, aut]
Maintainer: Thomas Lin Pedersen <thomasp85@gmail.com>
Diff between transformr versions 0.1.3 dated 2020-07-05 and 0.1.4 dated 2022-08-18
transformr-0.1.3/transformr/R/RcppExports.R |only transformr-0.1.3/transformr/src/RcppExports.cpp |only transformr-0.1.4/transformr/DESCRIPTION | 15 transformr-0.1.4/transformr/MD5 | 50 +- transformr-0.1.4/transformr/NAMESPACE | 5 transformr-0.1.4/transformr/NEWS.md | 4 transformr-0.1.4/transformr/R/aaa.R | 34 + transformr-0.1.4/transformr/R/cpp11.R |only transformr-0.1.4/transformr/R/shapes.R | 16 transformr-0.1.4/transformr/R/transformr-package.R | 10 transformr-0.1.4/transformr/R/tween_path.R | 17 transformr-0.1.4/transformr/R/tween_polygon.R | 21 transformr-0.1.4/transformr/R/tween_sf.R | 84 ++- transformr-0.1.4/transformr/README.md | 29 - transformr-0.1.4/transformr/man/figures/README-unnamed-chunk-2.gif |binary transformr-0.1.4/transformr/man/figures/README-unnamed-chunk-3.gif |binary transformr-0.1.4/transformr/man/figures/README-unnamed-chunk-4.gif |binary transformr-0.1.4/transformr/man/figures/README-unnamed-chunk-5.gif |binary transformr-0.1.4/transformr/man/figures/README-unnamed-chunk-6.gif |binary transformr-0.1.4/transformr/man/figures/README-unnamed-chunk-7.gif |binary transformr-0.1.4/transformr/man/transformr-package.Rd | 12 transformr-0.1.4/transformr/man/tween_path.Rd | 10 transformr-0.1.4/transformr/man/tween_polygon.Rd | 10 transformr-0.1.4/transformr/man/tween_sf.Rd | 10 transformr-0.1.4/transformr/src/align_rings.cpp | 35 - transformr-0.1.4/transformr/src/cpp11.cpp |only transformr-0.1.4/transformr/src/fill_down.cpp | 11 transformr-0.1.4/transformr/src/sf_packing.cpp | 224 +++++----- 28 files changed, 327 insertions(+), 270 deletions(-)
Title: Poisson-Tweedie Generalized Linear Mixed Model
Description: Fits the Poisson-Tweedie generalized linear mixed model
described in Signorelli et al. (2021, <doi:10.1177/1471082X20936017>).
Likelihood approximation based on adaptive Gauss Hermite quadrature
rule.
Author: Mirko Signorelli [aut, cre, cph]
,
Pietro Spitali [ctb],
Roula Tsonaka [ctb]
Maintainer: Mirko Signorelli <msignorelli.rpackages@gmail.com>
Diff between ptmixed versions 1.1.2 dated 2022-04-01 and 1.1.3 dated 2022-08-18
DESCRIPTION | 6 MD5 | 20 - R/makespaghetti.R | 283 +++++++-------- R/pmf.R | 87 ++-- inst/NEWS.md | 8 inst/doc/Overview_functionalities_ptmixed.R | 16 inst/doc/Overview_functionalities_ptmixed.Rmd | 469 +++++++++++++------------ inst/doc/Overview_functionalities_ptmixed.html | 122 ++++-- man/make.spaghetti.Rd | 8 man/pmf.Rd | 7 vignettes/Overview_functionalities_ptmixed.Rmd | 469 +++++++++++++------------ 11 files changed, 818 insertions(+), 677 deletions(-)
Title: Multivariate Difference Between Two Groups
Description: Estimation of multivariate differences between two groups (e.g., multivariate sex differences) with regularized regression methods and predictive approach. See Lönnqvist & Ilmarinen (2021) <doi:10.1007/s11109-021-09681-2> and Ilmarinen et al. (2022) <doi:10.1177/08902070221088155>.
Includes tools that help in understanding difference score reliability, predictions of difference score variables, conditional intra-class correlations, and heterogeneity of variance estimates. Package development was supported by the Academy of Finland research grant 338891.
Author: Ville-Juhani Ilmarinen [aut, cre]
Maintainer: Ville-Juhani Ilmarinen <vj.ilmarinen@gmail.com>
Diff between multid versions 0.6.0 dated 2022-06-08 and 0.7.0 dated 2022-08-18
DESCRIPTION | 11 MD5 | 26 NAMESPACE | 1 NEWS.md | 11 R/qcc.R |only R/reliability_dms.R | 15 R/vpc_at.R | 54 + README.md | 14 build/vignette.rds |binary inst/doc/multivariate_sex_differences_in_personality.R | 19 inst/doc/multivariate_sex_differences_in_personality.Rmd | 40 - inst/doc/multivariate_sex_differences_in_personality.html | 428 +++++++------- man/qcc.Rd |only man/reliability_dms.Rd | 2 vignettes/multivariate_sex_differences_in_personality.Rmd | 40 - 15 files changed, 399 insertions(+), 262 deletions(-)
Title: Software Citation Tools
Description: A collection of functions to extract citation information from 'R' packages and to deal with files in 'citation file format' (<https://citation-file-format.github.io/>), extending the functionality already provided by the citation() function in the 'utils' package.
Author: Jan Philipp Dietrich [aut, cre],
Waldir Leoncio [aut]
Maintainer: Jan Philipp Dietrich <dietrich@pik-potsdam.de>
Diff between citation versions 0.6.2 dated 2022-01-31 and 0.6.3 dated 2022-08-18
DESCRIPTION | 10 +++++----- LICENSE | 2 +- MD5 | 19 +++++++++++-------- R/cff2bibentry.R | 2 +- R/citation-package.R |only R/citation_doi.R | 2 +- R/r2cff.R | 4 ++++ R/read_cff.R | 2 +- README.md | 6 +++--- build |only inst/CITATION | 2 +- man/citation-package.Rd |only 12 files changed, 28 insertions(+), 21 deletions(-)
Title: Make Fake Data
Description: Make fake data, supporting addresses, person names, dates,
times, colors, coordinates, currencies, digital object identifiers
('DOIs'), jobs, phone numbers, 'DNA' sequences, doubles and integers
from distributions and within a range.
Author: Scott Chamberlain [aut, cre] ,
Kyle Voytovich [aut],
Martin Pedersen [ctb],
Brooke Anderson [rev] ,
Tristan Mahr [rev] ,
rOpenSci [fnd]
Maintainer: Scott Chamberlain <myrmecocystus+r@gmail.com>
Diff between charlatan versions 0.4.0 dated 2020-01-24 and 0.5.0 dated 2022-08-18
charlatan-0.4.0/charlatan/README.md |only charlatan-0.5.0/charlatan/DESCRIPTION | 37 - charlatan-0.5.0/charlatan/LICENSE | 2 charlatan-0.5.0/charlatan/MD5 | 81 +- charlatan-0.5.0/charlatan/NEWS.md | 13 charlatan-0.5.0/charlatan/R/address-provider-nl_NL.R |only charlatan-0.5.0/charlatan/R/address-provider.R | 21 charlatan-0.5.0/charlatan/R/generate.R | 2 charlatan-0.5.0/charlatan/R/internet-provider.R | 49 - charlatan-0.5.0/charlatan/R/jobs-provider-nl_NL.R |only charlatan-0.5.0/charlatan/R/jobs-provider.R | 6 charlatan-0.5.0/charlatan/build/vignette.rds |binary charlatan-0.5.0/charlatan/inst/doc/charlatan.html | 441 +++++++-------- charlatan-0.5.0/charlatan/inst/doc/contributing.html | 326 ++++++----- charlatan-0.5.0/charlatan/inst/ignore/ascii-stuff.R | 7 charlatan-0.5.0/charlatan/man/AddressProvider.Rd | 114 ++- charlatan-0.5.0/charlatan/man/BaseProvider.Rd | 70 +- charlatan-0.5.0/charlatan/man/ColorProvider.Rd | 87 +- charlatan-0.5.0/charlatan/man/CompanyProvider.Rd | 87 +- charlatan-0.5.0/charlatan/man/CoordinateProvider.Rd | 20 charlatan-0.5.0/charlatan/man/CreditCardProvider.Rd | 72 +- charlatan-0.5.0/charlatan/man/CurrencyProvider.Rd | 48 - charlatan-0.5.0/charlatan/man/DOIProvider.Rd | 48 - charlatan-0.5.0/charlatan/man/DateTimeProvider.Rd | 92 +-- charlatan-0.5.0/charlatan/man/ElementProvider.Rd | 57 + charlatan-0.5.0/charlatan/man/FileProvider.Rd | 77 +- charlatan-0.5.0/charlatan/man/FraudsterClient.Rd | 165 +++-- charlatan-0.5.0/charlatan/man/InternetProvider.Rd | 208 ++++--- charlatan-0.5.0/charlatan/man/JobProvider.Rd | 66 +- charlatan-0.5.0/charlatan/man/LoremProvider.Rd | 92 +-- charlatan-0.5.0/charlatan/man/MiscProvider.Rd | 67 +- charlatan-0.5.0/charlatan/man/MissingDataProvider.Rd | 48 - charlatan-0.5.0/charlatan/man/NumericsProvider.Rd | 77 +- charlatan-0.5.0/charlatan/man/PersonProvider.Rd | 122 ++-- charlatan-0.5.0/charlatan/man/PhoneNumberProvider.Rd | 62 +- charlatan-0.5.0/charlatan/man/SequenceProvider.Rd | 10 charlatan-0.5.0/charlatan/man/TaxonomyProvider.Rd | 62 +- charlatan-0.5.0/charlatan/man/UserAgentProvider.Rd | 112 ++- charlatan-0.5.0/charlatan/man/available_locales_df.Rd | 6 charlatan-0.5.0/charlatan/man/ch_generate.Rd | 2 charlatan-0.5.0/charlatan/tests/testthat/test-internet.R | 17 charlatan-0.5.0/charlatan/tests/testthat/test-job.R | 5 charlatan-0.5.0/charlatan/tests/testthat/test-missing.R | 2 43 files changed, 1620 insertions(+), 1260 deletions(-)
Title: Support for Spatial Objects Within the 'mlr3' Ecosystem
Description: Extends the 'mlr3' ML framework with methods for spatial
objects. Data storage and prediction are supported for packages
'terra', 'raster' and 'stars'.
Author: Marc Becker [aut, cre] ,
Patrick Schratz [aut]
Maintainer: Marc Becker <marcbecker@posteo.de>
Diff between mlr3spatial versions 0.1.2 dated 2022-03-06 and 0.2.0 dated 2022-08-18
mlr3spatial-0.1.2/mlr3spatial/R/DataBackendVector.R |only mlr3spatial-0.1.2/mlr3spatial/build |only mlr3spatial-0.1.2/mlr3spatial/inst/doc |only mlr3spatial-0.1.2/mlr3spatial/man/DataBackendVector.Rd |only mlr3spatial-0.1.2/mlr3spatial/man/demo_raster.Rd |only mlr3spatial-0.1.2/mlr3spatial/man/demo_stack_rasterbrick.Rd |only mlr3spatial-0.1.2/mlr3spatial/man/demo_stack_spatraster.Rd |only mlr3spatial-0.1.2/mlr3spatial/tests/testthat/helper-expectations.R |only mlr3spatial-0.1.2/mlr3spatial/tests/testthat/helper-future.R |only mlr3spatial-0.1.2/mlr3spatial/tests/testthat/setup-autotuner.R |only mlr3spatial-0.1.2/mlr3spatial/tests/testthat/setup-backends.R |only mlr3spatial-0.1.2/mlr3spatial/tests/testthat/setup-options.R |only mlr3spatial-0.1.2/mlr3spatial/tests/testthat/test-DataBackendRaster.R |only mlr3spatial-0.1.2/mlr3spatial/tests/testthat/test-DataBackendVector.R |only mlr3spatial-0.1.2/mlr3spatial/tests/testthat/test-autotuner.R |only mlr3spatial-0.1.2/mlr3spatial/tests/testthat/test-predict_spatial.R |only mlr3spatial-0.1.2/mlr3spatial/vignettes |only mlr3spatial-0.2.0/mlr3spatial/DESCRIPTION | 26 - mlr3spatial-0.2.0/mlr3spatial/MD5 | 94 ++-- mlr3spatial-0.2.0/mlr3spatial/NAMESPACE | 48 ++ mlr3spatial-0.2.0/mlr3spatial/NEWS.md | 25 + mlr3spatial-0.2.0/mlr3spatial/R/DataBackendRaster.R | 158 ++++---- mlr3spatial-0.2.0/mlr3spatial/R/LearnerClassifSpatial.R |only mlr3spatial-0.2.0/mlr3spatial/R/LearnerRegrSpatial.R |only mlr3spatial-0.2.0/mlr3spatial/R/TaskClassifST.R |only mlr3spatial-0.2.0/mlr3spatial/R/TaskClassif_leipzig.R |only mlr3spatial-0.2.0/mlr3spatial/R/TaskRegrST.R |only mlr3spatial-0.2.0/mlr3spatial/R/as_task_classif_st.R |only mlr3spatial-0.2.0/mlr3spatial/R/as_task_regr_st.R |only mlr3spatial-0.2.0/mlr3spatial/R/as_task_unsupervised.R |only mlr3spatial-0.2.0/mlr3spatial/R/data.R | 192 +++++++--- mlr3spatial-0.2.0/mlr3spatial/R/helper.R | 18 mlr3spatial-0.2.0/mlr3spatial/R/predict_spatial.R | 149 +++---- mlr3spatial-0.2.0/mlr3spatial/R/zzz.R | 33 + mlr3spatial-0.2.0/mlr3spatial/README.md | 161 +++++--- mlr3spatial-0.2.0/mlr3spatial/data |only mlr3spatial-0.2.0/mlr3spatial/inst/WORDLIST | 27 - mlr3spatial-0.2.0/mlr3spatial/inst/extdata |only mlr3spatial-0.2.0/mlr3spatial/man/DataBackendRaster.Rd | 97 ++--- mlr3spatial-0.2.0/mlr3spatial/man/TaskClassifST.Rd |only mlr3spatial-0.2.0/mlr3spatial/man/TaskRegrST.Rd |only mlr3spatial-0.2.0/mlr3spatial/man/as_data_backend.Rd | 30 - mlr3spatial-0.2.0/mlr3spatial/man/as_task_classif_st.Rd |only mlr3spatial-0.2.0/mlr3spatial/man/as_task_regr_st.Rd |only mlr3spatial-0.2.0/mlr3spatial/man/block_size.Rd | 2 mlr3spatial-0.2.0/mlr3spatial/man/factor_layer.Rd |only mlr3spatial-0.2.0/mlr3spatial/man/figures |only mlr3spatial-0.2.0/mlr3spatial/man/generate_stack.Rd |only mlr3spatial-0.2.0/mlr3spatial/man/leipzig.Rd |only mlr3spatial-0.2.0/mlr3spatial/man/mask_stack.Rd |only mlr3spatial-0.2.0/mlr3spatial/man/numeric_layer.Rd |only mlr3spatial-0.2.0/mlr3spatial/man/predict_spatial.Rd | 59 +-- mlr3spatial-0.2.0/mlr3spatial/man/sample_stack.Rd |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/helper_expectations.R |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/helper_future.R |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/helper_learner.R |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/setup.R |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/teardown.R | 6 mlr3spatial-0.2.0/mlr3spatial/tests/testthat/test_DataBackendRaster.R |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/test_LearnerClassifSpatial.R |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/test_LearnerRegrSpatial.R |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/test_TaskClassifST.R |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/test_TaskRegrST.R |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/test_as_task_classif_st.R |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/test_as_task_regr_st.R |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/test_as_task_unsupervised.R |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/test_bock_size.R |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/test_data.R |only mlr3spatial-0.2.0/mlr3spatial/tests/testthat/test_predict_spatial.R |only 69 files changed, 700 insertions(+), 425 deletions(-)
Title: Solutions for Common Problems in Base R
Description: Contains functions for solving commonly encountered problems while
programming in R. This package is intended to provide a lightweight
supplement to Base R, and will be useful for almost any R user.
Author: David Bosak [aut, cre],
Andrew Simmons [aut],
Duong Tran [ctb]
Maintainer: David Bosak <dbosak01@gmail.com>
Diff between common versions 1.0.1 dated 2022-07-18 and 1.0.3 dated 2022-08-18
common-1.0.1/common/tests/testthat/test-common.R |only common-1.0.3/common/DESCRIPTION | 11 common-1.0.3/common/MD5 | 57 - common-1.0.3/common/NAMESPACE | 7 common-1.0.3/common/NEWS.md | 18 common-1.0.3/common/R/common.R | 612 ----------- common-1.0.3/common/R/file_functions.R |only common-1.0.3/common/R/operators.R |only common-1.0.3/common/R/other_functions.R |only common-1.0.3/common/R/override_functions.R |only common-1.0.3/common/R/subsc.R |only common-1.0.3/common/R/supsc.R |only common-1.0.3/common/README.md | 4 common-1.0.3/common/build/vignette.rds |binary common-1.0.3/common/inst/doc/common.R | 267 ++++ common-1.0.3/common/inst/doc/common.Rmd | 220 +++ common-1.0.3/common/inst/doc/common.html | 522 +++++---- common-1.0.3/common/man/Sys.path.Rd | 8 common-1.0.3/common/man/common.Rd |only common-1.0.3/common/man/copy.attributes.Rd |only common-1.0.3/common/man/dir.find.Rd |only common-1.0.3/common/man/file.find.Rd |only common-1.0.3/common/man/find.names.Rd |only common-1.0.3/common/man/grapes-eq-grapes.Rd | 2 common-1.0.3/common/man/grapes-p-grapes.Rd | 2 common-1.0.3/common/man/images/sup1.png |only common-1.0.3/common/man/images/sup2.png |only common-1.0.3/common/man/images/sup3.png |only common-1.0.3/common/man/images/sup4.png |only common-1.0.3/common/man/labels.data.frame.Rd | 10 common-1.0.3/common/man/roundup.Rd | 2 common-1.0.3/common/man/sort.data.frame.Rd | 8 common-1.0.3/common/man/subsc.Rd |only common-1.0.3/common/man/supsc.Rd |only common-1.0.3/common/man/v.Rd | 2 common-1.0.3/common/tests/testthat/test-file_functions.R |only common-1.0.3/common/tests/testthat/test-operators.R |only common-1.0.3/common/tests/testthat/test-other_functions.R |only common-1.0.3/common/tests/testthat/test-override_functions.R |only common-1.0.3/common/tests/testthat/test-supsub.R |only common-1.0.3/common/vignettes/common.Rmd | 220 +++ 41 files changed, 1098 insertions(+), 874 deletions(-)
Title: Biological Geometries
Description: Is used to simulate and fit biological geometries. 'biogeom' incorporates several novel universal parametric equations that can generate the profiles of bird eggs, flowers, linear and lanceolate leaves, seeds, starfish, and tree-rings (Gielis (2003) <doi:10.3732/ajb.90.3.333>; Shi et al. (2020) <doi:10.3390/sym12040645>), three growth-rate curves representing the ontogenetic growth trajectories of animals and plants against time, and the axially symmetrical and integral forms of all these functions (Shi et al. (2017) <doi:10.1016/j.ecolmodel.2017.01.012>; Shi et al. (2021) <doi:10.3390/sym13081524>). The optimization method proposed by Nelder and Mead (1965) <doi:10.1093/comjnl/7.4.308> was used to estimate model parameters. 'biogeom' includes several real data sets of the boundary coordinates of natural shapes, including avian eggs, fruit, lanceolate and ovate leaves, tree rings, seeds, and sea stars,and can be potentially applied to other natural shapes. [...truncated...]
Author: Peijian Shi [aut, cre],
Johan Gielis [aut],
Brady K. Quinn [aut]
Maintainer: Peijian Shi <pjshi@njfu.edu.cn>
Diff between biogeom versions 1.0.9 dated 2022-08-07 and 1.1.1 dated 2022-08-18
DESCRIPTION | 8 +++---- MD5 | 20 +++++++++--------- R/bilat.R | 8 ------- R/curveNRGE.R | 1 R/fitNRGE.R | 2 - R/lmPE.R | 2 - build/partial.rdb |binary man/fitGE.Rd | 2 - man/fitPE.Rd | 58 +++++++++++++++++++++++++++++++----------------------- man/fitovate.Rd | 2 - man/fitsigmoid.Rd | 2 - 11 files changed, 54 insertions(+), 51 deletions(-)
Title: Fast Extrapolation of Time Features using K-Nearest Neighbors
Description: Fast extrapolation of univariate and multivariate time features using K-Nearest Neighbors. The compact set of hyper-parameters is tuned via grid or random search.
Author: Giancarlo Vercellino
Maintainer: Giancarlo Vercellino <giancarlo.vercellino@gmail.com>
Diff between jenga versions 1.2.0 dated 2022-05-23 and 1.3.0 dated 2022-08-18
DESCRIPTION | 9 - MD5 | 10 - NAMESPACE | 3 NEWS.md | 5 R/main.R | 445 +++++++++++++++++++++++++++++++++++++++-------------------- man/jenga.Rd | 22 +- 6 files changed, 326 insertions(+), 168 deletions(-)
Title: Simple Git Client for R
Description: Simple git client for R based on 'libgit2' <https://libgit2.org> with
support for SSH and HTTPS remotes. All functions in 'gert' use basic R data
types (such as vectors and data-frames) for their arguments and return values.
User credentials are shared with command line 'git' through the git-credential
store and ssh keys stored on disk or ssh-agent.
Author: Jeroen Ooms [aut, cre] ,
Jennifer Bryan [ctb]
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between gert versions 1.7.0 dated 2022-08-07 and 1.7.1 dated 2022-08-18
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- NEWS | 4 ++++ configure | 26 -------------------------- inst/doc/gert.html | 10 +++++----- 5 files changed, 16 insertions(+), 38 deletions(-)
More information about CirclesIntersections at CRAN
Permanent link
Title: Estimate Aerosol Particle Collection Through Sample Lines
Description: Estimate ideal efficiencies of aerosol sampling through sample
lines. Functions were developed consistent with the approach described in
Hogue, Mark; Thompson, Martha; Farfan, Eduardo; Hadlock, Dennis, (2014),
"Hand Calculations for Transport of Radioactive Aerosols through Sampling
Systems" Health Phys 106, 5, S78-S87, <doi:10.1097/HP.0000000000000092>.
Author: Mark Hogue
Maintainer: Mark Hogue <mark.hogue.chp@gmail.com>
Diff between AeroSampleR versions 0.1.12 dated 2021-12-03 and 0.1.14 dated 2022-08-18
AeroSampleR-0.1.12/AeroSampleR/R/utils_pipe.R |only AeroSampleR-0.1.12/AeroSampleR/man/pipe.Rd |only AeroSampleR-0.1.14/AeroSampleR/DESCRIPTION | 16 ++- AeroSampleR-0.1.14/AeroSampleR/MD5 | 26 +++-- AeroSampleR-0.1.14/AeroSampleR/NAMESPACE | 2 AeroSampleR-0.1.14/AeroSampleR/NEWS.md |only AeroSampleR-0.1.14/AeroSampleR/R/AeroSampleR-package.R |only AeroSampleR-0.1.14/AeroSampleR/R/report_basic.R | 42 +++++---- AeroSampleR-0.1.14/AeroSampleR/R/report_cum_plots.R | 6 - AeroSampleR-0.1.14/AeroSampleR/R/report_log_mass.R | 38 +++++--- AeroSampleR-0.1.14/AeroSampleR/R/report_plots.R | 34 ++++--- AeroSampleR-0.1.14/AeroSampleR/R/tube_eff.R | 75 ++++++++++------- AeroSampleR-0.1.14/AeroSampleR/build |only AeroSampleR-0.1.14/AeroSampleR/inst |only AeroSampleR-0.1.14/AeroSampleR/man/AeroSampleR.Rd |only AeroSampleR-0.1.14/AeroSampleR/man/tube_eff.Rd | 2 AeroSampleR-0.1.14/AeroSampleR/vignettes |only 17 files changed, 148 insertions(+), 93 deletions(-)
Title: A Common API to Modeling and Analysis Functions
Description: A common interface is provided to allow users to specify a
model without having to remember the different argument names across
different functions or computational engines (e.g. 'R', 'Spark',
'Stan', etc).
Author: Max Kuhn [aut, cre],
Davis Vaughan [aut],
Emil Hvitfeldt [ctb],
RStudio [cph, fnd]
Maintainer: Max Kuhn <max@rstudio.com>
Diff between parsnip versions 1.0.0 dated 2022-06-16 and 1.0.1 dated 2022-08-18
parsnip-1.0.0/parsnip/man/rmd/no-pooling.Rmd |only parsnip-1.0.1/parsnip/DESCRIPTION | 8 parsnip-1.0.1/parsnip/MD5 | 280 +++++----- parsnip-1.0.1/parsnip/NAMESPACE | 4 parsnip-1.0.1/parsnip/NEWS.md | 4 parsnip-1.0.1/parsnip/R/arguments.R | 10 parsnip-1.0.1/parsnip/R/auto_ml.R |only parsnip-1.0.1/parsnip/R/auto_ml_h2o.R |only parsnip-1.0.1/parsnip/R/bart.R | 2 parsnip-1.0.1/parsnip/R/boost_tree.R | 89 ++- parsnip-1.0.1/parsnip/R/engines.R | 8 parsnip-1.0.1/parsnip/R/linear_reg.R | 6 parsnip-1.0.1/parsnip/R/logistic_reg.R | 6 parsnip-1.0.1/parsnip/R/misc.R | 89 +-- parsnip-1.0.1/parsnip/R/model_object_docs.R | 2 parsnip-1.0.1/parsnip/R/print.R | 2 parsnip-1.0.1/parsnip/R/required_pkgs.R | 6 parsnip-1.0.1/parsnip/R/tunable.R | 7 parsnip-1.0.1/parsnip/build/parsnip.pdf |binary parsnip-1.0.1/parsnip/inst/models.tsv | 2 parsnip-1.0.1/parsnip/man/auto_ml.Rd |only parsnip-1.0.1/parsnip/man/details_auto_ml_h2o.Rd |only parsnip-1.0.1/parsnip/man/details_bag_mars_earth.Rd | 4 parsnip-1.0.1/parsnip/man/details_bart_dbarts.Rd | 4 parsnip-1.0.1/parsnip/man/details_boost_tree_h2o.Rd | 12 parsnip-1.0.1/parsnip/man/details_boost_tree_lightgbm.Rd | 32 - parsnip-1.0.1/parsnip/man/details_boost_tree_xgboost.Rd | 61 +- parsnip-1.0.1/parsnip/man/details_discrim_flexible_earth.Rd | 4 parsnip-1.0.1/parsnip/man/details_discrim_linear_MASS.Rd | 4 parsnip-1.0.1/parsnip/man/details_discrim_linear_mda.Rd | 4 parsnip-1.0.1/parsnip/man/details_discrim_linear_sda.Rd | 4 parsnip-1.0.1/parsnip/man/details_discrim_linear_sparsediscrim.Rd | 4 parsnip-1.0.1/parsnip/man/details_discrim_quad_MASS.Rd | 4 parsnip-1.0.1/parsnip/man/details_discrim_quad_sparsediscrim.Rd | 4 parsnip-1.0.1/parsnip/man/details_discrim_regularized_klaR.Rd | 4 parsnip-1.0.1/parsnip/man/details_gen_additive_mod_mgcv.Rd | 38 + parsnip-1.0.1/parsnip/man/details_linear_reg_brulee.Rd | 4 parsnip-1.0.1/parsnip/man/details_linear_reg_glm.Rd | 4 parsnip-1.0.1/parsnip/man/details_linear_reg_glmnet.Rd | 4 parsnip-1.0.1/parsnip/man/details_linear_reg_gls.Rd | 91 --- parsnip-1.0.1/parsnip/man/details_linear_reg_h2o.Rd | 9 parsnip-1.0.1/parsnip/man/details_linear_reg_keras.Rd | 4 parsnip-1.0.1/parsnip/man/details_linear_reg_lm.Rd | 4 parsnip-1.0.1/parsnip/man/details_linear_reg_lme.Rd | 8 parsnip-1.0.1/parsnip/man/details_linear_reg_lmer.Rd | 8 parsnip-1.0.1/parsnip/man/details_linear_reg_spark.Rd | 4 parsnip-1.0.1/parsnip/man/details_linear_reg_stan.Rd | 4 parsnip-1.0.1/parsnip/man/details_linear_reg_stan_glmer.Rd | 8 parsnip-1.0.1/parsnip/man/details_logistic_reg_LiblineaR.Rd | 4 parsnip-1.0.1/parsnip/man/details_logistic_reg_brulee.Rd | 4 parsnip-1.0.1/parsnip/man/details_logistic_reg_glm.Rd | 4 parsnip-1.0.1/parsnip/man/details_logistic_reg_glmer.Rd | 8 parsnip-1.0.1/parsnip/man/details_logistic_reg_glmnet.Rd | 4 parsnip-1.0.1/parsnip/man/details_logistic_reg_h2o.Rd | 10 parsnip-1.0.1/parsnip/man/details_logistic_reg_keras.Rd | 4 parsnip-1.0.1/parsnip/man/details_logistic_reg_spark.Rd | 4 parsnip-1.0.1/parsnip/man/details_logistic_reg_stan.Rd | 4 parsnip-1.0.1/parsnip/man/details_logistic_reg_stan_glmer.Rd | 8 parsnip-1.0.1/parsnip/man/details_mars_earth.Rd | 4 parsnip-1.0.1/parsnip/man/details_mlp_brulee.Rd | 4 parsnip-1.0.1/parsnip/man/details_mlp_h2o.Rd | 18 parsnip-1.0.1/parsnip/man/details_mlp_keras.Rd | 4 parsnip-1.0.1/parsnip/man/details_mlp_nnet.Rd | 4 parsnip-1.0.1/parsnip/man/details_multinom_reg_brulee.Rd | 4 parsnip-1.0.1/parsnip/man/details_multinom_reg_glmnet.Rd | 4 parsnip-1.0.1/parsnip/man/details_multinom_reg_h2o.Rd | 9 parsnip-1.0.1/parsnip/man/details_multinom_reg_keras.Rd | 4 parsnip-1.0.1/parsnip/man/details_multinom_reg_nnet.Rd | 4 parsnip-1.0.1/parsnip/man/details_multinom_reg_spark.Rd | 4 parsnip-1.0.1/parsnip/man/details_naive_Bayes_h2o.Rd | 3 parsnip-1.0.1/parsnip/man/details_nearest_neighbor_kknn.Rd | 4 parsnip-1.0.1/parsnip/man/details_pls_mixOmics.Rd | 8 parsnip-1.0.1/parsnip/man/details_poisson_reg_glm.Rd | 4 parsnip-1.0.1/parsnip/man/details_poisson_reg_glmer.Rd | 8 parsnip-1.0.1/parsnip/man/details_poisson_reg_glmnet.Rd | 4 parsnip-1.0.1/parsnip/man/details_poisson_reg_h2o.Rd | 9 parsnip-1.0.1/parsnip/man/details_poisson_reg_hurdle.Rd | 21 parsnip-1.0.1/parsnip/man/details_poisson_reg_stan.Rd | 4 parsnip-1.0.1/parsnip/man/details_poisson_reg_stan_glmer.Rd | 8 parsnip-1.0.1/parsnip/man/details_poisson_reg_zeroinfl.Rd | 21 parsnip-1.0.1/parsnip/man/details_proportional_hazards_glmnet.Rd | 6 parsnip-1.0.1/parsnip/man/details_rand_forest_h2o.Rd | 10 parsnip-1.0.1/parsnip/man/details_rule_fit_h2o.Rd | 10 parsnip-1.0.1/parsnip/man/details_rule_fit_xrf.Rd | 14 parsnip-1.0.1/parsnip/man/details_svm_linear_LiblineaR.Rd | 4 parsnip-1.0.1/parsnip/man/details_svm_linear_kernlab.Rd | 4 parsnip-1.0.1/parsnip/man/details_svm_poly_kernlab.Rd | 4 parsnip-1.0.1/parsnip/man/details_svm_rbf_kernlab.Rd | 4 parsnip-1.0.1/parsnip/man/figures/random_int_model.png |only parsnip-1.0.1/parsnip/man/figures/random_int_pop.png |only parsnip-1.0.1/parsnip/man/glmnet-details.Rd | 44 - parsnip-1.0.1/parsnip/man/model_spec.Rd | 2 parsnip-1.0.1/parsnip/man/rmd/aaa.Rmd | 8 parsnip-1.0.1/parsnip/man/rmd/auto_ml_h2o.Rmd |only parsnip-1.0.1/parsnip/man/rmd/auto_ml_h2o.md |only parsnip-1.0.1/parsnip/man/rmd/boost_tree_h2o.md | 4 parsnip-1.0.1/parsnip/man/rmd/boost_tree_lightgbm.Rmd | 6 parsnip-1.0.1/parsnip/man/rmd/boost_tree_lightgbm.md | 8 parsnip-1.0.1/parsnip/man/rmd/boost_tree_xgboost.Rmd | 24 parsnip-1.0.1/parsnip/man/rmd/boost_tree_xgboost.md | 46 + parsnip-1.0.1/parsnip/man/rmd/gen_additive_mod_mgcv.Rmd | 18 parsnip-1.0.1/parsnip/man/rmd/gen_additive_mod_mgcv.md | 33 + parsnip-1.0.1/parsnip/man/rmd/glmnet-details.md | 44 - parsnip-1.0.1/parsnip/man/rmd/linear_reg_gls.Rmd | 58 -- parsnip-1.0.1/parsnip/man/rmd/linear_reg_gls.md | 104 --- parsnip-1.0.1/parsnip/man/rmd/linear_reg_h2o.md | 5 parsnip-1.0.1/parsnip/man/rmd/linear_reg_lme.Rmd | 2 parsnip-1.0.1/parsnip/man/rmd/linear_reg_lme.md | 10 parsnip-1.0.1/parsnip/man/rmd/linear_reg_lmer.Rmd | 2 parsnip-1.0.1/parsnip/man/rmd/linear_reg_lmer.md | 10 parsnip-1.0.1/parsnip/man/rmd/linear_reg_stan_glmer.Rmd | 2 parsnip-1.0.1/parsnip/man/rmd/linear_reg_stan_glmer.md | 10 parsnip-1.0.1/parsnip/man/rmd/logistic_reg_glmer.Rmd | 2 parsnip-1.0.1/parsnip/man/rmd/logistic_reg_glmer.md | 10 parsnip-1.0.1/parsnip/man/rmd/logistic_reg_h2o.md | 6 parsnip-1.0.1/parsnip/man/rmd/logistic_reg_stan_glmer.Rmd | 2 parsnip-1.0.1/parsnip/man/rmd/logistic_reg_stan_glmer.md | 10 parsnip-1.0.1/parsnip/man/rmd/mlp_h2o.md | 14 parsnip-1.0.1/parsnip/man/rmd/multinom_reg_h2o.md | 5 parsnip-1.0.1/parsnip/man/rmd/naive_Bayes_h2o.md | 3 parsnip-1.0.1/parsnip/man/rmd/pls_mixOmics.Rmd | 2 parsnip-1.0.1/parsnip/man/rmd/pls_mixOmics.md | 2 parsnip-1.0.1/parsnip/man/rmd/poisson_reg_glmer.Rmd | 2 parsnip-1.0.1/parsnip/man/rmd/poisson_reg_glmer.md | 10 parsnip-1.0.1/parsnip/man/rmd/poisson_reg_h2o.md | 5 parsnip-1.0.1/parsnip/man/rmd/poisson_reg_hurdle.Rmd | 5 parsnip-1.0.1/parsnip/man/rmd/poisson_reg_hurdle.md | 14 parsnip-1.0.1/parsnip/man/rmd/poisson_reg_stan_glmer.Rmd | 2 parsnip-1.0.1/parsnip/man/rmd/poisson_reg_stan_glmer.md | 10 parsnip-1.0.1/parsnip/man/rmd/poisson_reg_zeroinfl.Rmd | 5 parsnip-1.0.1/parsnip/man/rmd/poisson_reg_zeroinfl.md | 14 parsnip-1.0.1/parsnip/man/rmd/proportional_hazards_glmnet.md | 2 parsnip-1.0.1/parsnip/man/rmd/rand_forest_h2o.md | 10 parsnip-1.0.1/parsnip/man/rmd/rule_fit_h2o.md | 6 parsnip-1.0.1/parsnip/man/rmd/rule_fit_xrf.md | 2 parsnip-1.0.1/parsnip/man/rmd/template-mtry-prop.Rmd | 2 parsnip-1.0.1/parsnip/man/rmd/template-no-pooling.Rmd |only parsnip-1.0.1/parsnip/man/xgb_train.Rd | 5 parsnip-1.0.1/parsnip/tests/testthat/_snaps/args_and_modes.md |only parsnip-1.0.1/parsnip/tests/testthat/_snaps/boost_tree_xgboost.md |only parsnip-1.0.1/parsnip/tests/testthat/_snaps/misc.md | 8 parsnip-1.0.1/parsnip/tests/testthat/_snaps/proportional_hazards.md | 14 parsnip-1.0.1/parsnip/tests/testthat/_snaps/translate.md | 74 ++ parsnip-1.0.1/parsnip/tests/testthat/test_args_and_modes.R | 9 parsnip-1.0.1/parsnip/tests/testthat/test_boost_tree_xgboost.R | 91 +++ parsnip-1.0.1/parsnip/tests/testthat/test_misc.R | 6 parsnip-1.0.1/parsnip/tests/testthat/test_translate.R | 27 147 files changed, 1116 insertions(+), 830 deletions(-)
Title: Accelerating 'ggplot2'
Description: The aim of 'ggplot2' is to aid in visual data investigations. This
focus has led to a lack of facilities for composing specialised plots.
'ggforce' aims to be a collection of mainly new stats and geoms that fills
this gap. All additional functionality is aimed to come through the official
extension system so using 'ggforce' should be a stable experience.
Author: Thomas Lin Pedersen [cre, aut]
,
RStudio [cph]
Maintainer: Thomas Lin Pedersen <thomasp85@gmail.com>
Diff between ggforce versions 0.3.3 dated 2021-03-05 and 0.3.4 dated 2022-08-18
ggforce-0.3.3/ggforce/R/ggforce_package.R |only ggforce-0.3.4/ggforce/DESCRIPTION | 28 +- ggforce-0.3.4/ggforce/MD5 | 108 ++++---- ggforce-0.3.4/ggforce/NAMESPACE | 12 ggforce-0.3.4/ggforce/NEWS.md | 4 ggforce-0.3.4/ggforce/R/arc_bar.R | 12 ggforce-0.3.4/ggforce/R/autodensity.R | 5 ggforce-0.3.4/ggforce/R/autohistogram.R | 4 ggforce-0.3.4/ggforce/R/bezier.R | 44 --- ggforce-0.3.4/ggforce/R/circle.R | 2 ggforce-0.3.4/ggforce/R/diagonal.R | 4 ggforce-0.3.4/ggforce/R/ellipse.R | 2 ggforce-0.3.4/ggforce/R/errorbar.R |only ggforce-0.3.4/ggforce/R/facet_grid_paginate.R | 1 ggforce-0.3.4/ggforce/R/facet_matrix.R | 8 ggforce-0.3.4/ggforce/R/facet_wrap_paginate.R | 6 ggforce-0.3.4/ggforce/R/ggforce-package.R |only ggforce-0.3.4/ggforce/R/labeller.R |only ggforce-0.3.4/ggforce/R/link.R | 24 - ggforce-0.3.4/ggforce/R/mark_circle.R | 24 - ggforce-0.3.4/ggforce/R/mark_ellipse.R | 10 ggforce-0.3.4/ggforce/R/mark_hull.R | 8 ggforce-0.3.4/ggforce/R/mark_label.R | 28 ++ ggforce-0.3.4/ggforce/R/mark_rect.R | 6 ggforce-0.3.4/ggforce/R/parallel_sets.R | 14 + ggforce-0.3.4/ggforce/R/position_auto.R | 5 ggforce-0.3.4/ggforce/R/regon.R | 12 ggforce-0.3.4/ggforce/R/scale-unit.R | 135 ---------- ggforce-0.3.4/ggforce/R/sina.R | 2 ggforce-0.3.4/ggforce/R/spiro.R | 2 ggforce-0.3.4/ggforce/R/trans.R | 2 ggforce-0.3.4/ggforce/R/voronoi.R | 2 ggforce-0.3.4/ggforce/README.md | 8 ggforce-0.3.4/ggforce/man/facet_grid_paginate.Rd | 4 ggforce-0.3.4/ggforce/man/facet_row.Rd | 4 ggforce-0.3.4/ggforce/man/facet_wrap_paginate.Rd | 4 ggforce-0.3.4/ggforce/man/figures/README-example-1.png |binary ggforce-0.3.4/ggforce/man/figures/lifecycle-archived.svg |only ggforce-0.3.4/ggforce/man/figures/lifecycle-defunct.svg |only ggforce-0.3.4/ggforce/man/figures/lifecycle-deprecated.svg |only ggforce-0.3.4/ggforce/man/figures/lifecycle-experimental.svg |only ggforce-0.3.4/ggforce/man/figures/lifecycle-maturing.svg |only ggforce-0.3.4/ggforce/man/figures/lifecycle-questioning.svg |only ggforce-0.3.4/ggforce/man/figures/lifecycle-stable.svg |only ggforce-0.3.4/ggforce/man/figures/lifecycle-superseded.svg |only ggforce-0.3.4/ggforce/man/geom_autohistogram.Rd | 4 ggforce-0.3.4/ggforce/man/geom_circle.Rd | 2 ggforce-0.3.4/ggforce/man/geom_delvor.Rd | 2 ggforce-0.3.4/ggforce/man/geom_mark_circle.Rd | 22 - ggforce-0.3.4/ggforce/man/geom_mark_ellipse.Rd | 28 +- ggforce-0.3.4/ggforce/man/geom_mark_hull.Rd | 26 +- ggforce-0.3.4/ggforce/man/geom_mark_rect.Rd | 24 - ggforce-0.3.4/ggforce/man/geom_parallel_sets.Rd | 11 ggforce-0.3.4/ggforce/man/geom_regon.Rd | 10 ggforce-0.3.4/ggforce/man/geom_sina.Rd | 2 ggforce-0.3.4/ggforce/man/ggforce-extensions.Rd | 16 - ggforce-0.3.4/ggforce/man/ggforce-package.Rd | 11 ggforce-0.3.4/ggforce/man/label_tex.Rd |only ggforce-0.3.4/ggforce/man/power_trans.Rd | 2 ggforce-0.3.4/ggforce/man/scale_unit.Rd | 141 ----------- ggforce-0.3.4/ggforce/man/stat_err.Rd |only ggforce-0.3.4/ggforce/src/RcppExports.cpp | 5 62 files changed, 308 insertions(+), 532 deletions(-)
Title: Load and Analyze Live Data from the COVID-19 Pandemic
Description: Load and analyze updated time series worldwide data of reported cases for the Novel Coronavirus Disease (COVID-19) from different sources, including the Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE) data repository <https://github.com/CSSEGISandData/COVID-19>, "Our World in Data" <https://github.com/owid/> among several others. The datasets reporting the COVID-19 cases are available in two main modalities, as a time series sequences and aggregated data for the last day with greater spatial resolution. Several analysis, visualization and modelling functions are available in the package that will allow the user to compute and visualize total number of cases, total number of changes and growth rate globally or for an specific geographical location, while at the same time generating models using these trends; generate interactive visualizations and generate Susceptible-Infected-Recovered (SIR) model for the disease spread.
Author: Marcelo Ponce [aut, cre], Amit Sandhel [ctb]
Maintainer: Marcelo Ponce <m.ponce@utoronto.ca>
Diff between covid19.analytics versions 2.1.2 dated 2022-04-06 and 2.1.3 dated 2022-08-18
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- NEWS | 3 +++ R/covid19_anal.R | 2 ++ README.md | 4 ++-- inst/doc/covid19.analytics.html | 18 +++++++++--------- man/c19.refGenome.data.Rd | 3 ++- vignettes/man/c19.refGenome.data.Rd | 3 ++- 8 files changed, 31 insertions(+), 24 deletions(-)
More information about covid19.analytics at CRAN
Permanent link
More information about CohensdpLibrary at CRAN
Permanent link
Title: Biodiversity Data Cleaning
Description: It brings together several aspects of biodiversity
data-cleaning in one place. 'bdc' is organized in thematic modules
related to different biodiversity dimensions, including 1) Merge
datasets: standardization and integration of different datasets; 2)
Pre-filter: flagging and removal of invalid or non-interpretable
information, followed by data amendments; 3) Taxonomy: cleaning,
parsing, and harmonization of scientific names from several taxonomic
groups against taxonomic databases locally stored through the
application of exact and partial matching algorithms; 4) Space:
flagging of erroneous, suspect, and low-precision geographic
coordinates; and 5) Time: flagging and, whenever possible, correction
of inconsistent collection date. In addition, it contains
features to visualize, document, and report data quality – which is
essential for making data quality assessment transparent and
reproducible. The reference for the methodology is Bruno et al. (2022)
<doi:10.1111/2041-210X.13868> [...truncated...]
Author: Bruno Ribeiro [aut, cre] ,
Santiago Velazco [aut] ,
Karlo Guidoni-Martins [aut] ,
Geiziane Tessarolo [aut] ,
Lucas Jardim [aut] ,
Steven Bachman [ctb] ,
Rafael Loyola [ctb]
Maintainer: Bruno Ribeiro <ribeiro.brr@gmail.com>
Diff between bdc versions 1.1.1 dated 2022-05-27 and 1.1.2 dated 2022-08-18
DESCRIPTION | 6 MD5 | 29 NEWS.md | 17 R/bdc_clean_names.R | 16 R/bdc_coordinates_empty.R | 18 R/bdc_query_names_taxadb.R | 14 R/utils.R | 8 inst/doc/integrate_datasets.html | 16 inst/doc/prefilter.html | 12 inst/doc/space.html | 12 inst/doc/taxonomy.html | 20 inst/doc/time.html | 16 inst/extdata/encoding-chars.txt |only inst/extdata/family_names/animalia_families.txt |27063 ++++++++++++++++++++++-- man/bdc_query_names_taxadb.Rd | 2 tests/testthat/test-bdc_coordinates_empty.R | 44 16 files changed, 26041 insertions(+), 1252 deletions(-)
More information about BayesianMediationA at CRAN
Permanent link