Title: 'Rcpp' Integration for 'GNU GSL' Vectors and Matrices
Description: 'Rcpp' integration for 'GNU GSL' vectors and matrices
The 'GNU Scientific Library' (or 'GSL') is a collection of numerical routines for
scientific computing. It is particularly useful for C and C++ programs as it
provides a standard C interface to a wide range of mathematical routines. There
are over 1000 functions in total with an extensive test suite. The 'RcppGSL'
package provides an easy-to-use interface between 'GSL' data structures and
R using concepts from 'Rcpp' which is itself a package that eases the
interfaces between R and C++. This package also serves as a prime example of
how to build a package that uses 'Rcpp' to connect to another third-party
library. The 'autoconf' script, 'inline' plugin and example package can all
be used as a stanza to write a similar package against another library.
Author: Dirk Eddelbuettel and Romain Francois
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppGSL versions 0.3.12 dated 2022-10-30 and 0.3.13 dated 2023-01-12
ChangeLog | 8 DESCRIPTION | 8 MD5 | 16 build/partial.rdb |binary build/vignette.rds |binary configure | 1388 --------------------------------------------- configure.ac | 7 inst/NEWS.Rd | 6 inst/doc/RcppGSL-intro.pdf |binary 9 files changed, 38 insertions(+), 1395 deletions(-)
Title: Meridional and Parallel Lines for Maps
Description: Create graticule lines and labels for maps. Control the creation
of lines or tiles by setting their placement (at particular meridians and parallels)
and extent (along parallels and meridians). Labels are created independently of
lines.
Author: Michael D. Sumner [aut, cre]
Maintainer: Michael D. Sumner <mdsumner@gmail.com>
Diff between graticule versions 0.1.6 dated 2021-05-04 and 0.2.0 dated 2023-01-12
graticule-0.1.6/graticule/man/pathologicule.Rd |only graticule-0.2.0/graticule/DESCRIPTION | 20 graticule-0.2.0/graticule/MD5 | 31 graticule-0.2.0/graticule/NAMESPACE | 7 graticule-0.2.0/graticule/NEWS.md | 21 graticule-0.2.0/graticule/R/graticule.R | 98 +- graticule-0.2.0/graticule/R/graticule2.R | 15 graticule-0.2.0/graticule/R/lonlat.R |only graticule-0.2.0/graticule/R/pathos.R | 79 +- graticule-0.2.0/graticule/README.md | 62 + graticule-0.2.0/graticule/build/vignette.rds |binary graticule-0.2.0/graticule/inst/doc/graticule.R | 175 ---- graticule-0.2.0/graticule/inst/doc/graticule.Rmd | 169 ---- graticule-0.2.0/graticule/inst/doc/graticule.html | 803 ++++++++++------------ graticule-0.2.0/graticule/man/graticule.Rd | 39 - graticule-0.2.0/graticule/man/graticule_labels.Rd | 3 graticule-0.2.0/graticule/man/lonlat.Rd |only graticule-0.2.0/graticule/vignettes/graticule.Rmd | 169 ---- 18 files changed, 643 insertions(+), 1048 deletions(-)
Title: R Interface to the 'DieHarder' RNG Test Suite
Description: The 'RDieHarder' package provides an R interface to
the 'DieHarder' suite of random number generators and tests that
was developed by Robert G. Brown and David Bauer, extending
earlier work by George Marsaglia and others. The 'DieHarder'
library code is included.
Author: Dirk Eddelbuettel, Robert G Brown, David Bauer
plus contributors to DieHarder
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RDieHarder versions 0.2.4 dated 2022-10-23 and 0.2.5 dated 2023-01-12
ChangeLog | 14 DESCRIPTION | 8 MD5 | 16 build/vignette.rds |binary configure | 2546 ------------------------------ configure.ac | 8 inst/doc/RDieHarder.pdf |binary src/globals.c | 1 src/libdieharder/dieharder/libdieharder.h | 2 9 files changed, 41 insertions(+), 2554 deletions(-)
Title: Rendering Word Documents with R Inline Code
Description: Serves for rendering MS Word documents with R inline code and inserting tables and plots.
Author: Tomas Hovorka
Maintainer: Tomas Hovorka <tomashovorka@seznam.cz>
Diff between WordR versions 0.3.5 dated 2022-07-10 and 0.3.6 dated 2023-01-12
DESCRIPTION | 10 +- MD5 | 14 +-- NEWS.md | 3 R/addPlots.R | 2 R/misc.R | 8 +- build/vignette.rds |binary inst/doc/WordR.html | 195 ++++++++++++++++++++++++++++------------------------ man/addPlots.Rd | 2 8 files changed, 128 insertions(+), 106 deletions(-)
Title: Methods for Colour Vectors and Colour Palettes
Description: Provides a comprehensive library for colour vectors and colour
palettes using a new family of colour classes (palettes_colour and
palettes_palette) that always print as hex codes with colour previews.
Capabilities include: formatting, casting and coercion, extraction and
updating of components, plotting, colour mixing arithmetic, and colour
interpolation.
Author: Michael McCarthy [aut, cre, cph]
Maintainer: Michael McCarthy <m.mccarthy1624@gmail.com>
Diff between palettes versions 0.1.0 dated 2022-12-19 and 0.1.1 dated 2023-01-12
DESCRIPTION | 6 MD5 | 18 +- NEWS.md | 4 README.md | 2 inst/doc/creating-packages.R | 10 - inst/doc/creating-packages.Rmd | 10 - inst/doc/creating-packages.html | 10 - inst/doc/ggplot2.html | 2 inst/doc/gt.html | 282 ++++++++++++++++++++-------------------- vignettes/creating-packages.Rmd | 10 - 10 files changed, 180 insertions(+), 174 deletions(-)
Title: Landscape and Range Expansion Simulation
Description: Tools to generate random landscape graphs, evaluate species
occurrence in dynamic landscapes, simulate future landscape occupation and
evaluate range expansion when new empty patches are available (e.g. as a
result of climate change). References: Mestre, F., Canovas, F., Pita, R.,
Mira, A., Beja, P. (2016) <doi:10.1016/j.envsoft.2016.03.007>; Mestre, F.,
Risk, B., Mira, A., Beja, P., Pita, R. (2017)
<doi:10.1016/j.ecolmodel.2017.06.013>; Mestre, F., Pita, R., Mira, A., Beja,
P. (2020) <doi:10.1186/s12898-019-0273-5>.
Author: Frederico Mestre, Fernando Canovas, Benjamin Risk, Ricardo Pita,
Antonio Mira, Pedro Beja.
Maintainer: Frederico Mestre <mestre.frederico@gmail.com>
Diff between MetaLandSim versions 1.0.10 dated 2022-06-30 and 2.0.0 dated 2023-01-12
MetaLandSim-1.0.10/MetaLandSim/R/MetaLandSim.GUI.R |only MetaLandSim-1.0.10/MetaLandSim/inst/examples/landmask.asc.aux.xml |only MetaLandSim-1.0.10/MetaLandSim/inst/examples/presences.asc.aux.xml |only MetaLandSim-1.0.10/MetaLandSim/inst/logo |only MetaLandSim-1.0.10/MetaLandSim/man/MetaLandSim.GUI.Rd |only MetaLandSim-1.0.10/MetaLandSim/vignettes/rg1.png |only MetaLandSim-2.0.0/MetaLandSim/DESCRIPTION | 16 MetaLandSim-2.0.0/MetaLandSim/MD5 | 55 MetaLandSim-2.0.0/MetaLandSim/NAMESPACE | 32 MetaLandSim-2.0.0/MetaLandSim/R/import.shape.R | 11 MetaLandSim-2.0.0/MetaLandSim/R/plot_expansion.R | 62 MetaLandSim-2.0.0/MetaLandSim/R/range_expansion.R | 300 +- MetaLandSim-2.0.0/MetaLandSim/R/range_raster.R | 240 -- MetaLandSim-2.0.0/MetaLandSim/build/vignette.rds |binary MetaLandSim-2.0.0/MetaLandSim/data/param2.rda |binary MetaLandSim-2.0.0/MetaLandSim/data/rg_exp.rda |binary MetaLandSim-2.0.0/MetaLandSim/inst/doc/landscape_simulation-knitr.pdf |binary MetaLandSim-2.0.0/MetaLandSim/inst/doc/parameter_estimation-knitr.pdf |binary MetaLandSim-2.0.0/MetaLandSim/inst/doc/range_expansion-knitr.R | 9 MetaLandSim-2.0.0/MetaLandSim/inst/doc/range_expansion-knitr.Rnw | 205 -- MetaLandSim-2.0.0/MetaLandSim/inst/doc/range_expansion-knitr.pdf |binary MetaLandSim-2.0.0/MetaLandSim/inst/examples/landmask.asc | 1016 ++++++++-- MetaLandSim-2.0.0/MetaLandSim/inst/examples/presences.asc |binary MetaLandSim-2.0.0/MetaLandSim/man/MetaLandSim-package.Rd | 18 MetaLandSim-2.0.0/MetaLandSim/man/param2.Rd | 77 MetaLandSim-2.0.0/MetaLandSim/man/plot_expansion.Rd | 61 MetaLandSim-2.0.0/MetaLandSim/man/range_expansion.Rd | 27 MetaLandSim-2.0.0/MetaLandSim/man/range_raster.Rd | 45 MetaLandSim-2.0.0/MetaLandSim/man/rg_exp.Rd | 52 MetaLandSim-2.0.0/MetaLandSim/vignettes/range_expansion-knitr.Rnw | 205 -- MetaLandSim-2.0.0/MetaLandSim/vignettes/rg2.png |binary 31 files changed, 1465 insertions(+), 966 deletions(-)
Title: Machine Learning and Inference for Topological Data Analysis
Description: Topological data analysis is a powerful tool for finding non-linear global structure
in whole datasets. 'TDApplied' aims to bridge topological data analysis with data, statistical
and machine learning practitioners so that more analyses may benefit from the
power of topological data analysis. The main tool of topological data analysis is
persistent homology, which computes a shape descriptor of a dataset, called
a persistence diagram. There are five goals of this package: (1) deliver a fast implementation
of persistent homology via a python interface, (2) convert persistence diagrams
computed using the two main R packages for topological data analysis into a data frame,
(3) implement fast versions of both distance and kernel calculations
for pairs of persistence diagrams, (4) contribute tools for the interpretation of
persistence diagrams, and (5) provide parallelized methods for machine learning
and inference for persistence diagrams.
Author: Shael Brown [aut, cre],
Dr. Reza Farivar [aut, fnd]
Maintainer: Shael Brown <shaelebrown@gmail.com>
Diff between TDApplied versions 2.0.1 dated 2022-12-23 and 2.0.2 dated 2023-01-12
DESCRIPTION | 6 +-- MD5 | 18 +++++------ NEWS.md | 4 ++ R/TDApplied.R | 21 +++++++------ build/partial.rdb |binary inst/doc/ML_and_Inference.R | 11 +++++++ inst/doc/ML_and_Inference.Rmd | 25 ++++++++++++++-- inst/doc/ML_and_Inference.html | 51 ++++++++++++++++++++++++--------- vignettes/ML_and_Inference.Rmd | 25 ++++++++++++++-- vignettes/REFERENCES.bib | 62 +++++++++++++++++++++++++++++++++++++++++ 10 files changed, 181 insertions(+), 42 deletions(-)
Title: Apply Functions to All Combinations of List Elements
Description: Provides an extension to the 'purrr' family of mapping
functions to apply a function to each combination of elements in a
list of inputs. Also includes functions for automatically detecting
output type in mapping functions, finding every combination of
elements of lists or rows of data frames, and applying multiple models
to multiple subsets of a dataset.
Author: Alexander Rossell Hayes [aut, cre, cph]
Maintainer: Alexander Rossell Hayes <alexander@rossellhayes.com>
Diff between crossmap versions 0.3.3 dated 2022-08-12 and 0.4.0 dated 2023-01-12
DESCRIPTION | 17 ++++++--------- MD5 | 33 ++++++++++++++++++++---------- NAMESPACE | 2 + NEWS.md | 7 ++++++ R/crossmap-package.R | 1 R/future_xmap.R | 2 + R/xmap.R | 1 R/xpluck.R |only man/examples |only man/figures/lifecycle-archived.svg |only man/figures/lifecycle-defunct.svg |only man/figures/lifecycle-deprecated.svg |only man/figures/lifecycle-experimental.svg |only man/figures/lifecycle-maturing.svg |only man/figures/lifecycle-questioning.svg |only man/figures/lifecycle-soft-deprecated.svg |only man/figures/lifecycle-stable.svg |only man/figures/lifecycle-superseded.svg |only man/map_vec.Rd | 6 ++--- man/xmap.Rd | 4 +-- man/xpluck.Rd |only tests/testthat/test-future_xmap.R | 4 +-- tests/testthat/test-xmap.R | 12 +++++++++- tests/testthat/test-xpluck.R |only 24 files changed, 60 insertions(+), 29 deletions(-)
Title: Map Projections
Description: Converts latitude/longitude into projected coordinates.
Author: Doug McIlroy. Packaged for R by Ray Brownrigg and Thomas P
Minka, transition to Plan 9 codebase by Roger Bivand.
Maintainer: Alex Deckmyn <alex.deckmyn@meteo.be>
Diff between mapproj versions 1.2.9 dated 2022-10-30 and 1.2.11 dated 2023-01-12
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ R/mapproj.r | 15 +++++++-------- src/init.c | 4 ++-- src/mapproject.c | 35 ++++++++++++++--------------------- src/perspective.c | 4 ++-- src/tetra.c | 8 ++++---- 7 files changed, 39 insertions(+), 47 deletions(-)
Title: Open-Source Software for 'Omic' Data Analysis and Visualization
Description: A tool for interactive exploration of the results from 'omics'
experiments to facilitate novel discoveries from high-throughput biology. The
software includes R functions for the 'bioinformatician' to deposit study
metadata and the outputs from statistical analyses (e.g. differential
expression, enrichment). These results are then exported to an interactive
JavaScript dashboard that can be interrogated on the user's local machine or
deployed online to be explored by collaborators. The dashboard includes
'sortable' tables, interactive plots including network visualization, and
fine-grained filtering based on statistical significance.
Author: Terrence Ernst [aut] ,
John Blischak [aut, cre] ,
Paul Nordlund [aut] ,
Justin Moore [aut] ,
Joe Dalen [aut] ,
Akshay Bhamidipati [aut] ,
Brett Engelmann [aut],
Marco Curado [aut] ,
Joe LoGrasso [aut] ,
AbbVie Inc. [cph, fnd]
Maintainer: John Blischak <jdblischak@gmail.com>
Diff between OmicNavigator versions 1.11.5 dated 2022-05-26 and 1.13.6 dated 2023-01-12
DESCRIPTION | 8 LICENSE | 4 MD5 | 262 +- NAMESPACE | 146 - NEWS.md | 1573 +++++++------- R/add.R | 1304 ++++++------ R/app.R | 1040 ++++----- R/check.R | 1066 ++++----- R/combine.R | 194 - R/data.R | 388 +-- R/export.R | 1187 +++++------ R/get.R | 1057 ++++----- R/import.R | 182 - R/local.R | 222 +- R/overlaps.R | 242 +- R/plots.R | 812 ++++--- R/print.R | 64 R/sanitize.R | 214 - R/summary.R | 98 R/tests.R | 990 ++++----- R/upset.R | 1406 ++++++------- R/utility.R | 410 +-- R/validate.R | 691 +++--- R/zzz.R | 174 - README.md | 446 ++-- build/partial.rdb |binary inst/doc/OmicNavigatorAPI.R | 768 +++---- inst/doc/OmicNavigatorAPI.Rnw | 1149 +++++----- inst/doc/OmicNavigatorAPI.pdf |binary inst/doc/OmicNavigatorUsersGuide.R | 1034 ++++----- inst/doc/OmicNavigatorUsersGuide.Rnw | 2892 +++++++++++++-------------- inst/doc/OmicNavigatorUsersGuide.pdf |binary inst/extdata/description-fields-reserved.txt | 94 inst/tinytest/testAdd.R | 316 +- inst/tinytest/testApp.R | 1006 +++++---- inst/tinytest/testBugs.R | 432 ++-- inst/tinytest/testCheck.R | 1114 +++++----- inst/tinytest/testCombine.R | 268 +- inst/tinytest/testExport.R | 468 ++-- inst/tinytest/testExtraMetadata.R | 302 +- inst/tinytest/testGet.R | 1662 +++++++-------- inst/tinytest/testGetNumeric.R | 534 ++-- inst/tinytest/testImport.R | 482 ++-- inst/tinytest/testOverlaps.R | 90 inst/tinytest/testPiecemeal.R | 364 +-- inst/tinytest/testPlot.R | 1978 +++++++++--------- inst/tinytest/testPrint.R | 58 inst/tinytest/testSummary.R | 68 inst/tinytest/testUpset.R | 1682 +++++++-------- inst/tinytest/testUtility.R | 66 inst/tinytest/testValidate.R | 518 ++-- inst/tinytest/tinytestSettings.R | 18 man/Mm.c2.Rd | 70 man/OmicNavigator.Rd | 38 man/addAnnotations.Rd | 70 man/addAssays.Rd | 60 man/addBarcodes.Rd | 82 man/addEnrichments.Rd | 68 man/addEnrichmentsLinkouts.Rd | 120 - man/addFeatures.Rd | 58 man/addMapping.Rd | 93 man/addMetaFeatures.Rd | 66 man/addMetaFeaturesLinkouts.Rd | 128 - man/addModels.Rd | 102 man/addOverlaps.Rd | 56 man/addPlots.Rd | 126 - man/addReports.Rd | 62 man/addResults.Rd | 58 man/addResultsLinkouts.Rd | 128 - man/addSamples.Rd | 58 man/addTests.Rd | 118 - man/basal.vs.lp.Rd | 90 man/basal.vs.ml.Rd | 90 man/cam.BasalvsLP.Rd | 82 man/cam.BasalvsML.Rd | 82 man/combineStudies.Rd | 142 - man/createStudy.Rd | 490 ++-- man/exportStudy.Rd | 66 man/getAnnotations.Rd | 74 man/getAssays.Rd | 74 man/getBarcodeData.Rd | 78 man/getBarcodes.Rd | 74 man/getEnrichments.Rd | 96 man/getEnrichmentsIntersection.Rd | 102 man/getEnrichmentsLinkouts.Rd | 84 man/getEnrichmentsNetwork.Rd | 66 man/getEnrichmentsTable.Rd | 78 man/getEnrichmentsUpset.Rd | 80 man/getFavicons.Rd | 52 man/getFeatures.Rd | 58 man/getInstalledStudies.Rd | 38 man/getLinkFeatures.Rd | 52 man/getMapping.Rd | 72 man/getMetaFeatures.Rd | 74 man/getMetaFeaturesLinkouts.Rd | 74 man/getMetaFeaturesTable.Rd | 54 man/getModels.Rd | 74 man/getNodeFeatures.Rd | 60 man/getOverlaps.Rd | 74 man/getPackageVersion.Rd | 34 man/getPlots.Rd | 74 man/getPlottingData.Rd | 130 - man/getReportLink.Rd | 44 man/getReports.Rd | 74 man/getResults.Rd | 90 man/getResultsIntersection.Rd | 104 man/getResultsLinkouts.Rd | 74 man/getResultsTable.Rd | 75 man/getResultsUpset.Rd | 58 man/getSamples.Rd | 74 man/getTests.Rd | 78 man/getUpsetCols.Rd | 42 man/group.Rd | 80 man/importStudy.Rd | 46 man/installApp.Rd | 66 man/installStudy.Rd | 42 man/lane.Rd | 80 man/lcpm.Rd | 70 man/listStudies.Rd | 54 man/plotStudy.Rd | 88 man/removeStudy.Rd | 42 man/samplenames.Rd | 70 man/shared-add.Rd | 42 man/shared-data.Rd | 46 man/shared-get.Rd | 80 man/shared-upset.Rd | 66 man/startApp.Rd | 74 man/summary.onStudy.Rd | 46 man/validateStudy.Rd | 38 tests/tinytest.R | 8 vignettes/OmicNavigatorAPI.Rnw | 1149 +++++----- vignettes/OmicNavigatorUsersGuide.Rnw | 2892 +++++++++++++-------------- 132 files changed, 21059 insertions(+), 20605 deletions(-)
Title: Tools for Gaussian Process Modeling in Uncertainty
Quantification
Description: Gaussian processes (GPs) have been widely used to model spatial data, spatio-temporal data, and computer experiments in diverse areas of statistics including spatial statistics, spatio-temporal statistics, uncertainty quantification, and machine learning. This package creates basic tools for fitting and prediction based on GPs with spatial data, spatio-temporal data, and computer experiments. Key characteristics for this GP tool include: (1) the comprehensive implementation of various covariance functions including the Matérn family and the Confluent Hypergeometric family with isotropic form, tensor form, and automatic relevance determination form, where the isotropic form is widely used in spatial statistics, the tensor form is widely used in design and analysis of computer experiments and uncertainty quantification, and the automatic relevance determination form is widely used in machine learning; (2) implementations via Markov chain Monte Carlo (MCMC) algorithms and optimization alg [...truncated...]
Author: Pulong Ma [aut, cre]
Maintainer: Pulong Ma <mpulong@gmail.com>
Diff between GPBayes versions 0.1.0-4 dated 2022-08-06 and 0.1.0-5 dated 2023-01-12
DESCRIPTION | 8 MD5 | 8 configure | 1749 ++++++++++++++++++++++++++++++++++++++--------------------- configure.ac | 5 inst/NEWS.Rd | 6 5 files changed, 1173 insertions(+), 603 deletions(-)
Title: HTTP and WebSocket Server Library
Description: Provides low-level socket and protocol support for handling
HTTP and WebSocket requests directly from within R. It is primarily
intended as a building block for other packages, rather than making it
particularly easy to create complete web applications using httpuv alone.
httpuv is built on top of the libuv and http-parser C libraries, both of
which were developed by Joyent, Inc. (See LICENSE file for libuv and
http-parser license information.)
Author: Joe Cheng [aut],
Winston Chang [aut, cre],
RStudio, PBC [cph],
Hector Corrada Bravo [ctb],
Jeroen Ooms [ctb],
Andrzej Krzemienski [cph]
Maintainer: Winston Chang <winston@rstudio.com>
Diff between httpuv versions 1.6.7 dated 2022-12-14 and 1.6.8 dated 2023-01-12
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- NEWS.md | 5 +++++ src/httpuv.cpp | 17 +++++++++++++---- 4 files changed, 25 insertions(+), 11 deletions(-)
More information about healthcare.antitrust at CRAN
Permanent link
Title: A Modern and Flexible Web Client for R
Description: The curl() and curl_download() functions provide highly
configurable drop-in replacements for base url() and download.file() with
better performance, support for encryption (https, ftps), gzip compression,
authentication, and other 'libcurl' goodies. The core of the package implements a
framework for performing fully customized requests where data can be processed
either in memory, on disk, or streaming via the callback or connection
interfaces. Some knowledge of 'libcurl' is recommended; for a more-user-friendly
web client see the 'httr' package which builds on this package with http
specific tools and logic.
Author: Jeroen Ooms [aut, cre] ,
Hadley Wickham [ctb],
RStudio [cph]
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between curl versions 4.3.3 dated 2022-10-06 and 5.0.0 dated 2023-01-12
curl-4.3.3/curl/tools/typecheck.R |only curl-4.3.3/curl/tools/typechecking.c.in |only curl-5.0.0/curl/DESCRIPTION | 8 curl-5.0.0/curl/LICENSE | 2 curl-5.0.0/curl/MD5 | 84 +- curl-5.0.0/curl/NAMESPACE | 7 curl-5.0.0/curl/NEWS | 8 curl-5.0.0/curl/R/download.R | 4 curl-5.0.0/curl/R/echo.R | 5 curl-5.0.0/curl/R/handle.R | 18 curl-5.0.0/curl/R/multi.R | 4 curl-5.0.0/curl/R/multi_download.R |only curl-5.0.0/curl/R/onload.R | 25 curl-5.0.0/curl/R/options.R | 32 curl-5.0.0/curl/R/parse_headers.R | 2 curl-5.0.0/curl/R/proxy.R | 5 curl-5.0.0/curl/R/sysdata.rda |binary curl-5.0.0/curl/R/writer.R | 15 curl-5.0.0/curl/build/vignette.rds |binary curl-5.0.0/curl/cleanup | 2 curl-5.0.0/curl/configure | 21 curl-5.0.0/curl/inst/WORDLIST | 41 - curl-5.0.0/curl/inst/doc/intro.html | 74 -- curl-5.0.0/curl/inst/doc/windows.Rmd | 30 curl-5.0.0/curl/inst/doc/windows.html | 86 +- curl-5.0.0/curl/man/curl_download.Rd | 6 curl-5.0.0/curl/man/file_writer.Rd | 10 curl-5.0.0/curl/man/handle.Rd | 4 curl-5.0.0/curl/man/ie_proxy.Rd | 5 curl-5.0.0/curl/man/multi.Rd | 6 curl-5.0.0/curl/man/multi_download.Rd |only curl-5.0.0/curl/man/nslookup.Rd | 2 curl-5.0.0/curl/man/send_mail.Rd | 10 curl-5.0.0/curl/src/Makevars.win | 13 curl-5.0.0/curl/src/curl-common.h | 14 curl-5.0.0/curl/src/handle.c | 68 + curl-5.0.0/curl/src/init.c | 12 curl-5.0.0/curl/src/options.c |only curl-5.0.0/curl/src/typechecking.c | 81 -- curl-5.0.0/curl/src/typelist.h |only curl-5.0.0/curl/src/writer.c | 24 curl-5.0.0/curl/tests/testthat/test-multi-download.R |only curl-5.0.0/curl/tests/testthat/test-winssl.R |only curl-5.0.0/curl/tools/symbols-in-versions | 649 +++++++++++-------- curl-5.0.0/curl/tools/symbols.R | 2 curl-5.0.0/curl/tools/typelist.R |only curl-5.0.0/curl/tools/typelist.h.in |only curl-5.0.0/curl/vignettes/windows.Rmd | 30 48 files changed, 837 insertions(+), 572 deletions(-)
Title: Serializable Representations
Description: String and binary representations of objects for several formats /
mime types.
Author: Philipp Angerer [aut, cre] ,
Thomas Kluyver [aut],
Jan Schulz [aut],
abielr [ctb],
Denilson Figueiredo de Sa [ctb],
Jim Hester [ctb],
karldw [ctb],
Dave Foster [ctb],
Carson Sievert [ctb]
Maintainer: Philipp Angerer <phil.angerer@gmail.com>
Diff between repr versions 1.1.4 dated 2022-01-04 and 1.1.5 dated 2023-01-12
DESCRIPTION | 10 +++++----- MD5 | 7 ++++--- NEWS.md | 2 +- tests/testthat/helper-stringr.R |only tests/testthat/test_repr_htmlwidget.r | 17 ++++------------- 5 files changed, 14 insertions(+), 22 deletions(-)
Title: Prepare and Explore Data for Palaeobiological Analyses
Description: Provides functionality to support data preparation and exploration for
palaeobiological analyses, improving code reproducibility and accessibility. The
wider aim of 'palaeoverse' is to bring the palaeobiological community together
to establish agreed standards. The package currently includes functionality for
data cleaning, binning (time and space), exploration, summarisation and
visualisation. Reference datasets (i.e. Geological Time Scales <https://stratigraphy.org/chart>)
and auxiliary functions are also provided. Details can be found in:
Jones et al., (2022) <doi:10.31223/X5Z94Q>.
Author: Lewis A. Jones [aut, cre] ,
William Gearty [aut] ,
Bethany J. Allen [aut] ,
Kilian Eichenseer [aut] ,
Christopher D. Dean [aut] ,
Sofia Galvan [ctb] ,
Miranta Kouvari [ctb] ,
Pedro L. Godoy [ctb] ,
Cecily Nicholl [ctb] ,
Lucas Buffan [ctb] ,
Erin M. [...truncated...]
Maintainer: Lewis A. Jones <LewisAlan.Jones@uvigo.es>
Diff between palaeoverse versions 1.0.0 dated 2022-10-31 and 1.1.0 dated 2023-01-12
palaeoverse-1.0.0/palaeoverse/tests/testthat/_snaps/axis_geo/axis-geo-with-old-gts-scale.svg |only palaeoverse-1.1.0/palaeoverse/DESCRIPTION | 21 palaeoverse-1.1.0/palaeoverse/MD5 | 87 palaeoverse-1.1.0/palaeoverse/NAMESPACE | 4 palaeoverse-1.1.0/palaeoverse/NEWS.md | 25 palaeoverse-1.1.0/palaeoverse/R/axis_geo.R | 91 palaeoverse-1.1.0/palaeoverse/R/bin_lat.R | 30 palaeoverse-1.1.0/palaeoverse/R/bin_time.R | 177 palaeoverse-1.1.0/palaeoverse/R/group_apply.R | 16 palaeoverse-1.1.0/palaeoverse/R/lat_bins.R | 62 palaeoverse-1.1.0/palaeoverse/R/look_up.R | 23 palaeoverse-1.1.0/palaeoverse/R/palaeorotate.R | 103 palaeoverse-1.1.0/palaeoverse/R/palaeoverse-package.R |only palaeoverse-1.1.0/palaeoverse/R/tax_range_time.R | 2 palaeoverse-1.1.0/palaeoverse/R/tax_unique.R | 310 palaeoverse-1.1.0/palaeoverse/R/time_bins.R | 199 palaeoverse-1.1.0/palaeoverse/README.md | 22 palaeoverse-1.1.0/palaeoverse/build/partial.rdb |binary palaeoverse-1.1.0/palaeoverse/build/vignette.rds |binary palaeoverse-1.1.0/palaeoverse/inst/doc/structure-and-standards.Rmd | 2 palaeoverse-1.1.0/palaeoverse/inst/doc/structure-and-standards.html | 115 palaeoverse-1.1.0/palaeoverse/man/axis_geo.Rd | 33 palaeoverse-1.1.0/palaeoverse/man/bin_lat.Rd | 8 palaeoverse-1.1.0/palaeoverse/man/bin_time.Rd | 110 palaeoverse-1.1.0/palaeoverse/man/lat_bins.Rd | 33 palaeoverse-1.1.0/palaeoverse/man/palaeorotate.Rd | 33 palaeoverse-1.1.0/palaeoverse/man/palaeoverse-package.Rd |only palaeoverse-1.1.0/palaeoverse/man/tax_range_time.Rd | 2 palaeoverse-1.1.0/palaeoverse/man/tax_unique.Rd | 58 palaeoverse-1.1.0/palaeoverse/man/time_bins.Rd | 53 palaeoverse-1.1.0/palaeoverse/tests/testthat/Rplots.pdf |only palaeoverse-1.1.0/palaeoverse/tests/testthat/_snaps/axis_geo/axis-geo-on-multiple-sides.svg | 442 palaeoverse-1.1.0/palaeoverse/tests/testthat/_snaps/axis_geo/axis-geo-with-backwards-ultrametric-tree.svg |only palaeoverse-1.1.0/palaeoverse/tests/testthat/_snaps/axis_geo/axis-geo-with-downwards-fossil-tree.svg |only palaeoverse-1.1.0/palaeoverse/tests/testthat/_snaps/axis_geo/axis-geo-with-fossil-tree.svg |only palaeoverse-1.1.0/palaeoverse/tests/testthat/_snaps/axis_geo/axis-geo-with-multiple-scales.svg | 4494 +++++++++- palaeoverse-1.1.0/palaeoverse/tests/testthat/_snaps/axis_geo/axis-geo-with-time-bins-scale.svg |only palaeoverse-1.1.0/palaeoverse/tests/testthat/_snaps/axis_geo/axis-geo-with-ultrametric-tree.svg |only palaeoverse-1.1.0/palaeoverse/tests/testthat/_snaps/axis_geo/axis-geo.svg | 4238 +++++++++ palaeoverse-1.1.0/palaeoverse/tests/testthat/setup-data.R | 34 palaeoverse-1.1.0/palaeoverse/tests/testthat/test-axis_geo.R | 66 palaeoverse-1.1.0/palaeoverse/tests/testthat/test-bin_lat.R | 7 palaeoverse-1.1.0/palaeoverse/tests/testthat/test-bin_time.R | 49 palaeoverse-1.1.0/palaeoverse/tests/testthat/test-lat_bins.R | 3 palaeoverse-1.1.0/palaeoverse/tests/testthat/test-look_up.R | 9 palaeoverse-1.1.0/palaeoverse/tests/testthat/test-phylo_check.R | 1 palaeoverse-1.1.0/palaeoverse/tests/testthat/test-tax_unique.R | 8 palaeoverse-1.1.0/palaeoverse/tests/testthat/test-time_bins.R | 14 palaeoverse-1.1.0/palaeoverse/vignettes/structure-and-standards.Rmd | 2 49 files changed, 9793 insertions(+), 1193 deletions(-)
Title: The Machine Learning and AI Modeling Companion to 'healthyR'
Description: Hospital machine learning and ai data analysis workflow tools, modeling, and automations.
This library provides many useful tools to review common administrative
hospital data. Some of these include predicting length of stay, and readmits.
The aim is to provide a simple and consistent verb framework that takes the
guesswork out of everything.
Author: Steven Sanderson [aut, cre, cph]
Maintainer: Steven Sanderson <spsanderson@gmail.com>
Diff between healthyR.ai versions 0.0.10 dated 2022-11-16 and 0.0.11 dated 2023-01-12
DESCRIPTION | 8 MD5 | 16 - NEWS.md | 12 + R/auto-kmeans.R | 426 +++++++++++++++++++-------------------- inst/doc/auto-kmeans.html | 4 inst/doc/getting-started.html | 179 +++++++--------- inst/doc/kmeans-umap.html | 54 ++-- man/figures/README-example-1.png |binary man/figures/README-example-2.png |binary 9 files changed, 353 insertions(+), 346 deletions(-)
Title: Bindings for the 'Geospatial' Data Abstraction Library
Description: Provides bindings to the 'Geospatial' Data Abstraction Library ('GDAL') (>= 1.11.4) and access to projection/transformation operations from the 'PROJ' library. Please note that 'rgdal' will be retired by the end of 2023, plan transition to sf/stars/'terra' functions using 'GDAL' and 'PROJ' at your earliest convenience. Use is made of classes defined in the 'sp' package. Raster and vector map data can be imported into R, and raster and vector 'sp' objects exported. The 'GDAL' and 'PROJ' libraries are external to the package, and, when installing the package from source, must be correctly installed first; it is important that 'GDAL' < 3 be matched with 'PROJ' < 6. From 'rgdal' 1.5-8, installed with to 'GDAL' >=3, 'PROJ' >=6 and 'sp' >= 1.4, coordinate reference systems use 'WKT2_2019' strings, not 'PROJ' strings. 'Windows' and 'macOS' binaries (including 'GDAL', 'PROJ' and their dependencies) are provided on 'CRAN'.
Author: Roger Bivand [cre, aut] ,
Tim Keitt [aut],
Barry Rowlingson [aut, ctb],
Edzer Pebesma [ctb],
Michael Sumner [ctb],
Robert Hijmans [ctb],
Daniel Baston [ctb],
Even Rouault [cph, ctb],
Frank Warmerdam [cph, ctb],
Jeroen Ooms [ctb],
Colin Rundel [ctb]
Maintainer: Roger Bivand <Roger.Bivand@nhh.no>
Diff between rgdal versions 1.6-3 dated 2022-12-14 and 1.6-4 dated 2023-01-12
DESCRIPTION | 8 +++--- MD5 | 22 +++++++++--------- NEWS.md | 10 +++++++- R/AAA.R | 2 + configure | 31 ++++++++++++++++++-------- configure.ac | 10 ++++++++ data/GridsDatums.rda |binary inst/SVN_VERSION | 2 - inst/doc/CRS_projections_transformations.html | 25 ++++++++++---------- inst/doc/OGR_shape_encoding.pdf |binary inst/doc/PROJ6_GDAL3.html | 18 +++++++-------- src/Makevars.ucrt | 6 ++--- 12 files changed, 84 insertions(+), 50 deletions(-)
Title: Robust Inference for Absolute Abundance in Microbiome Analysis
Description: This package offers a robust approach to make inference on the association of
covariates with the absolute abundance (AA) of microbiome in an ecosystem.
It can be also directly applied to relative abundance (RA) data to make inference
on AA because the ratio of two RA is equal to the ratio of their AA. This
algorithm can estimate and test the associations of interest while
adjusting for potential confounders. The estimates of this method have easy
interpretation like a typical regression analysis. High-dimensional covariates
are handled with regularization and it is implemented by parallel computing.
False discovery rate is automatically controlled by this approach. Zeros do not
need to be imputed by a positive value for the analysis. The IFAA package also
offers the 'MZILN' function for estimating and testing associations of abundance
ratios with covariates.
Author: Quran Wu [aut],
Zhigang Li [aut, cre]
Maintainer: Zhigang Li <lzg2151@gmail.com>
Diff between IFAA versions 1.1.0 dated 2022-11-02 and 1.1.2 dated 2023-01-12
DESCRIPTION | 41 ++++++++++----- MD5 | 8 +-- R/originDataScreen.R | 131 ++++++++++++++++++++++++--------------------------- build/IFAA.pdf |binary inst/doc/IFAA.pdf |binary 5 files changed, 95 insertions(+), 85 deletions(-)
Title: Improper Bagging Survival Tree
Description: Fit a full or subsampling bagging survival tree on a mixture of population (susceptible and nonsusceptible)
using either a pseudo R2 criterion or an adjusted Logrank criterion. The predictor is
evaluated using the Out Of Bag Integrated Brier Score (IBS) and several scores of importance
are computed for variable selection. The thresholds values for variable selection are
computed using a nonparametric permutation test.
See 'Cyprien Mbogning' and 'Philippe Broet' (2016)<doi:10.1186/s12859-016-1090-x> for
an overview about the methods implemented in this package.
Author: Cyprien Mbogning and Philippe Broet
Maintainer: Cyprien Mbogning <cyprien.mbogning@gmail.com>
Diff between iBST versions 1.1 dated 2022-04-18 and 1.2 dated 2023-01-12
DESCRIPTION | 10 +++++----- MD5 | 14 +++++++------- R/Bagg_Surv.R | 4 ++-- R/Splitt_Surv.R | 4 ++-- build/partial.rdb |binary man/Bagg_Surv.Rd | 18 ++++++++++++------ man/Bagg_pred_Surv.Rd | 23 +++++++++++++++++++---- man/iBST-package.Rd | 13 ++++++++----- 8 files changed, 55 insertions(+), 31 deletions(-)
Title: Investigating the Functional Characteristics of Selected SNPs
and Their Vicinity Genomic Region
Description: To investigate the functional characteristics of selected SNPs and their vicinity genomic region. Linked SNPs in moderate to high linkage disequilibrium (e.g. r2>0.50) with the corresponding index SNPs will be selected for further analysis.
Author: Alireza Ani [aut, cre],
Zoha Kamali [aut],
Ahmad Vaez [aut]
Maintainer: Alireza Ani <a.ani@umcg.nl>
Diff between SNPannotator versions 0.2.5.0 dated 2022-08-15 and 0.2.6.0 dated 2023-01-12
DESCRIPTION | 10 +++++----- MD5 | 6 +++--- R/CADD.R | 5 ++++- R/getVariantData.R | 5 ++++- 4 files changed, 16 insertions(+), 10 deletions(-)
Title: Plots of the Empirical Attainment Function
Description: Computation and visualization of the empirical attainment function (EAF) for the analysis of random sets in multi-criterion optimization. M. López-Ibáñez, L. Paquete, and T. Stützle (2010) <doi:10.1007/978-3-642-02538-9_9>.
Author: Manuel Lopez-Ibanez [aut, cre]
,
Marco Chiarandini [aut],
Carlos Fonseca [aut],
Luis Paquete [aut],
Thomas Stuetzle [aut],
Mickael Binois [ctb]
Maintainer: Manuel Lopez-Ibanez <manuel.lopez-ibanez@manchester.ac.uk>
Diff between eaf versions 2.3 dated 2021-12-21 and 2.4 dated 2023-01-12
DESCRIPTION | 10 MD5 | 109 ++-- NAMESPACE | 6 NEWS.md | 59 +- R/common.R | 4 R/eaf-package.R | 18 R/eaf.R | 1031 ---------------------------------------------- R/eafplot.R |only R/epsilon.R | 3 R/hv.R | 2 R/igd.R | 8 R/interactive.R | 54 +- R/nondominated.R | 16 R/normalise.R | 6 R/pdf_crop.R | 35 + R/read_datasets.R | 4 R/vorob.R | 150 +++--- R/whv.R | 35 - README.md | 11 build/partial.rdb |binary configure | 53 +- configure.ac | 33 + inst/REFERENCES.bib | 12 man/Vorob.Rd | 1 man/attsurf2df.Rd | 1 man/choose_eafdiffplot.Rd | 15 man/eaf-package.Rd | 2 man/eafdiff.Rd | 1 man/eafdiffplot.Rd | 10 man/eafplot.Rd | 8 man/eafs.Rd | 11 man/epsilon.Rd | 1 man/hv_contributions.Rd | 3 man/hypervolume.Rd | 5 man/igd.Rd | 1 man/largest_eafdiff.Rd | 5 man/nondominated.Rd | 6 man/pdf_crop.Rd | 30 + man/whv_hype.Rd | 1 man/whv_rect.Rd | 7 src/Makevars.in | 9 src/Makevars.win | 2 src/eaf/bit_array.h | 8 src/eaf/eaf.h | 5 src/eaf/gcc.mk | 2 src/eaf/io.c | 4 src/eaf/io.h | 15 src/eaf/io_priv.h | 16 src/eaf/svn_version | 2 src/mo-tools/gcc.mk | 2 src/mo-tools/io.c | 4 src/mo-tools/io.h | 15 src/mo-tools/io_priv.h | 16 src/mo-tools/svn_version | 2 src/mo-tools/whv.c | 2 tests/testthat/test-eaf.R | 5 56 files changed, 517 insertions(+), 1359 deletions(-)
Title: Dynamic Factor Models
Description: Efficient estimation of Dynamic Factor Models using the Expectation Maximization (EM) algorithm
or Two-Step (2S) estimation, supporting datasets with missing data. The estimation options follow advances in the
econometric literature: either running the Kalman Filter and Smoother once with initial values from PCA -
2S estimation as in Doz, Giannone and Reichlin (2011) <doi:10.1016/j.jeconom.2011.02.012> - or via iterated
Kalman Filtering and Smoothing until EM convergence - following Doz, Giannone and Reichlin (2012)
<doi:10.1162/REST_a_00225> - or using the adapted EM algorithm of Banbura and Modugno (2014) <doi:10.1002/jae.2306>,
allowing arbitrary patterns of missing data. The implementation makes heavy use of the 'Armadillo' 'C++' library and
the 'collapse' package, providing for particularly speedy estimation. A comprehensive set of methods supports
interpretation and visualization of the model as well as forecasting. Information criteria to choose the number
of f [...truncated...]
Author: Sebastian Krantz [aut, cre],
Rytis Bagdziunas [aut]
Maintainer: Sebastian Krantz <sebastian.krantz@graduateinstitute.ch>
Diff between dfms versions 0.1.3 dated 2022-10-12 and 0.1.4 dated 2023-01-12
DESCRIPTION | 16 ++++++++-------- MD5 | 20 ++++++++++---------- NEWS.md | 4 ++++ R/DFM.R | 11 ++++++----- R/methods.R | 5 ++++- R/utils.R | 3 ++- README.md | 13 ++++++++++--- build/partial.rdb |binary inst/doc/introduction.html | 4 ++-- man/DFM.Rd | 4 ++-- man/ICr.Rd | 3 +++ 11 files changed, 51 insertions(+), 32 deletions(-)
Title: Power and Sample Size Calculations for Clinical Trials
Description: Efficient simulation-based power and sample size calculations are supported for a
broad class of late-stage clinical trials. The following modules are included in
the package:
Adaptive designs with data-driven sample size or event count re-estimation,
Adaptive designs with data-driven treatment selection,
Adaptive designs with data-driven population selection,
Optimal selection of a futility stopping rule,
Event prediction in event-driven trials,
Adaptive trials with response-adaptive randomization (experimental module),
Traditional trials with multiple objectives (experimental module).
Traditional trials with cluster-randomized designs (experimental module).
Author: Alex Dmitrienko [aut, cre]
Maintainer: Alex Dmitrienko <admitrienko@mediana.us>
Diff between MedianaDesigner versions 0.11 dated 2022-12-15 and 0.12 dated 2023-01-12
CHANGELOG | 5 ++++- DESCRIPTION | 13 ++++++------- MD5 | 26 +++++++++++++------------- NAMESPACE | 1 - R/ADPopSel.r | 7 +++++++ R/ADRand.r | 7 +++++++ R/ADSSMod.r | 9 ++++++++- R/ADTreatSel.r | 10 ++++++++-- R/ClustRand.r | 7 +++++++ R/EventPred.r | 7 +++++++ R/FutRule.r | 7 +++++++ R/MultAdj.r | 7 +++++++ R/common.r | 13 ++++++++++++- tests/testthat/test-ADTreatSel.r | 34 +++++++++++++++++++++++++--------- 14 files changed, 118 insertions(+), 35 deletions(-)
More information about MedianaDesigner at CRAN
Permanent link
Title: Spherical Geometry Operators Using the S2 Geometry Library
Description: Provides R bindings for Google's s2 library for geometric calculations on
the sphere. High-performance constructors and exporters provide high compatibility
with existing spatial packages, transformers construct new geometries from existing
geometries, predicates provide a means to select geometries based on spatial
relationships, and accessors extract information about geometries.
Author: Dewey Dunnington [aut] ,
Edzer Pebesma [aut, cre] ,
Ege Rubak [aut],
Jeroen Ooms [ctb] ,
Google, Inc. [cph]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between s2 versions 1.1.1 dated 2022-11-17 and 1.1.2 dated 2023-01-12
s2-1.1.1/s2/src/absl/base/internal/exponential_biased.cc |only s2-1.1.1/s2/src/absl/base/internal/exponential_biased.h |only s2-1.1.1/s2/src/absl/base/internal/periodic_sampler.cc |only s2-1.1.1/s2/src/absl/base/internal/periodic_sampler.h |only s2-1.1.1/s2/src/absl/container/internal/have_sse.h |only s2-1.1.1/s2/src/absl/container/internal/node_hash_policy.h |only s2-1.1.1/s2/src/absl/debugging/leak_check_disable.cc |only s2-1.1.2/s2/DESCRIPTION | 8 s2-1.1.2/s2/MD5 | 379 +- s2-1.1.2/s2/NEWS.md | 11 s2-1.1.2/s2/man/s2_boundary.Rd | 6 s2-1.1.2/s2/man/s2_contains.Rd | 6 s2-1.1.2/s2/man/s2_geog_point.Rd | 4 s2-1.1.2/s2/man/s2_plot.Rd | 6 s2-1.1.2/s2/src/Makevars.in | 16 s2-1.1.2/s2/src/Makevars.win | 16 s2-1.1.2/s2/src/absl/algorithm/container.h | 194 - s2-1.1.2/s2/src/absl/base/attributes.h | 176 - s2-1.1.2/s2/src/absl/base/casts.h | 131 s2-1.1.2/s2/src/absl/base/config.h | 325 +- s2-1.1.2/s2/src/absl/base/dynamic_annotations.h | 27 s2-1.1.2/s2/src/absl/base/internal/cycleclock.cc | 54 s2-1.1.2/s2/src/absl/base/internal/cycleclock.h | 69 s2-1.1.2/s2/src/absl/base/internal/direct_mmap.h | 6 s2-1.1.2/s2/src/absl/base/internal/endian.h | 79 s2-1.1.2/s2/src/absl/base/internal/fast_type_id.h | 2 s2-1.1.2/s2/src/absl/base/internal/invoke.h | 54 s2-1.1.2/s2/src/absl/base/internal/low_level_alloc.h | 4 s2-1.1.2/s2/src/absl/base/internal/prefetch.h |only s2-1.1.2/s2/src/absl/base/internal/raw_logging.cc | 56 s2-1.1.2/s2/src/absl/base/internal/raw_logging.h | 53 s2-1.1.2/s2/src/absl/base/internal/spinlock.cc | 3 s2-1.1.2/s2/src/absl/base/internal/spinlock.h | 12 s2-1.1.2/s2/src/absl/base/internal/spinlock_linux.inc | 7 s2-1.1.2/s2/src/absl/base/internal/spinlock_wait.h | 2 s2-1.1.2/s2/src/absl/base/internal/sysinfo.cc | 79 s2-1.1.2/s2/src/absl/base/internal/thread_identity.cc | 3 s2-1.1.2/s2/src/absl/base/internal/thread_identity.h | 8 s2-1.1.2/s2/src/absl/base/internal/unscaledcycleclock.cc | 29 s2-1.1.2/s2/src/absl/base/internal/unscaledcycleclock.h | 21 s2-1.1.2/s2/src/absl/base/log_severity.cc | 28 s2-1.1.2/s2/src/absl/base/log_severity.h | 51 s2-1.1.2/s2/src/absl/base/optimization.h | 30 s2-1.1.2/s2/src/absl/base/options.h | 2 s2-1.1.2/s2/src/absl/base/thread_annotations.h | 4 s2-1.1.2/s2/src/absl/container/btree_map.h | 153 s2-1.1.2/s2/src/absl/container/btree_set.h | 178 - s2-1.1.2/s2/src/absl/container/fixed_array.h | 7 s2-1.1.2/s2/src/absl/container/flat_hash_map.h | 15 s2-1.1.2/s2/src/absl/container/flat_hash_set.h | 24 s2-1.1.2/s2/src/absl/container/inlined_vector.h | 217 - s2-1.1.2/s2/src/absl/container/internal/btree.h | 1088 ++++-- s2-1.1.2/s2/src/absl/container/internal/btree_container.h | 53 s2-1.1.2/s2/src/absl/container/internal/common.h | 11 s2-1.1.2/s2/src/absl/container/internal/container_memory.h | 38 s2-1.1.2/s2/src/absl/container/internal/counting_allocator.h | 8 s2-1.1.2/s2/src/absl/container/internal/hash_function_defaults.h | 32 s2-1.1.2/s2/src/absl/container/internal/hashtablez_sampler.cc | 190 - s2-1.1.2/s2/src/absl/container/internal/hashtablez_sampler.h | 147 s2-1.1.2/s2/src/absl/container/internal/inlined_vector.h | 866 ++--- s2-1.1.2/s2/src/absl/container/internal/node_slot_policy.h |only s2-1.1.2/s2/src/absl/container/internal/raw_hash_map.h | 5 s2-1.1.2/s2/src/absl/container/internal/raw_hash_set.cc | 26 s2-1.1.2/s2/src/absl/container/internal/raw_hash_set.h | 992 ++++-- s2-1.1.2/s2/src/absl/container/node_hash_map.h | 19 s2-1.1.2/s2/src/absl/container/node_hash_set.h | 15 s2-1.1.2/s2/src/absl/debugging/failure_signal_handler.cc | 7 s2-1.1.2/s2/src/absl/debugging/failure_signal_handler.h | 2 s2-1.1.2/s2/src/absl/debugging/internal/address_is_readable.cc | 133 s2-1.1.2/s2/src/absl/debugging/internal/demangle.cc | 12 s2-1.1.2/s2/src/absl/debugging/internal/elf_mem_image.cc | 27 s2-1.1.2/s2/src/absl/debugging/internal/elf_mem_image.h | 9 s2-1.1.2/s2/src/absl/debugging/internal/examine_stack.cc | 222 + s2-1.1.2/s2/src/absl/debugging/internal/examine_stack.h | 34 s2-1.1.2/s2/src/absl/debugging/internal/stack_consumption.cc | 2 s2-1.1.2/s2/src/absl/debugging/internal/stack_consumption.h | 2 s2-1.1.2/s2/src/absl/debugging/internal/stacktrace_aarch64-inl.inc | 11 s2-1.1.2/s2/src/absl/debugging/internal/stacktrace_arm-inl.inc | 11 s2-1.1.2/s2/src/absl/debugging/internal/stacktrace_config.h | 18 s2-1.1.2/s2/src/absl/debugging/internal/stacktrace_emscripten-inl.inc |only s2-1.1.2/s2/src/absl/debugging/internal/stacktrace_powerpc-inl.inc | 11 s2-1.1.2/s2/src/absl/debugging/internal/stacktrace_riscv-inl.inc |only s2-1.1.2/s2/src/absl/debugging/internal/stacktrace_x86-inl.inc | 43 s2-1.1.2/s2/src/absl/debugging/internal/symbolize.h | 10 s2-1.1.2/s2/src/absl/debugging/internal/vdso_support.cc | 39 s2-1.1.2/s2/src/absl/debugging/leak_check.cc | 44 s2-1.1.2/s2/src/absl/debugging/leak_check.h | 19 s2-1.1.2/s2/src/absl/debugging/stacktrace.cc | 2 s2-1.1.2/s2/src/absl/debugging/symbolize.cc | 20 s2-1.1.2/s2/src/absl/debugging/symbolize_elf.inc | 69 s2-1.1.2/s2/src/absl/debugging/symbolize_emscripten.inc |only s2-1.1.2/s2/src/absl/debugging/symbolize_win32.inc | 49 s2-1.1.2/s2/src/absl/functional/any_invocable.h |only s2-1.1.2/s2/src/absl/functional/bind_front.h | 11 s2-1.1.2/s2/src/absl/functional/function_ref.h | 8 s2-1.1.2/s2/src/absl/functional/internal/any_invocable.h |only s2-1.1.2/s2/src/absl/memory/memory.h | 2 s2-1.1.2/s2/src/absl/meta/type_traits.h | 34 s2-1.1.2/s2/src/absl/numeric/bits.h | 3 s2-1.1.2/s2/src/absl/numeric/int128.cc | 19 s2-1.1.2/s2/src/absl/numeric/int128.h | 227 - s2-1.1.2/s2/src/absl/numeric/int128_have_intrinsic.inc | 44 s2-1.1.2/s2/src/absl/numeric/int128_no_intrinsic.inc | 147 s2-1.1.2/s2/src/absl/profiling |only s2-1.1.2/s2/src/absl/strings/ascii.h | 8 s2-1.1.2/s2/src/absl/strings/charconv.cc | 6 s2-1.1.2/s2/src/absl/strings/charconv.h | 5 s2-1.1.2/s2/src/absl/strings/cord.cc | 1567 +++------- s2-1.1.2/s2/src/absl/strings/cord.h | 536 ++- s2-1.1.2/s2/src/absl/strings/cord_analysis.cc |only s2-1.1.2/s2/src/absl/strings/cord_analysis.h |only s2-1.1.2/s2/src/absl/strings/cord_buffer.cc |only s2-1.1.2/s2/src/absl/strings/cord_buffer.h |only s2-1.1.2/s2/src/absl/strings/internal/charconv_parse.cc | 2 s2-1.1.2/s2/src/absl/strings/internal/cord_data_edge.h |only s2-1.1.2/s2/src/absl/strings/internal/cord_internal.cc | 52 s2-1.1.2/s2/src/absl/strings/internal/cord_internal.h | 306 + s2-1.1.2/s2/src/absl/strings/internal/cord_rep_btree.cc |only s2-1.1.2/s2/src/absl/strings/internal/cord_rep_btree.h |only s2-1.1.2/s2/src/absl/strings/internal/cord_rep_btree_navigator.cc |only s2-1.1.2/s2/src/absl/strings/internal/cord_rep_btree_navigator.h |only s2-1.1.2/s2/src/absl/strings/internal/cord_rep_btree_reader.cc |only s2-1.1.2/s2/src/absl/strings/internal/cord_rep_btree_reader.h |only s2-1.1.2/s2/src/absl/strings/internal/cord_rep_consume.cc |only s2-1.1.2/s2/src/absl/strings/internal/cord_rep_consume.h |only s2-1.1.2/s2/src/absl/strings/internal/cord_rep_crc.cc |only s2-1.1.2/s2/src/absl/strings/internal/cord_rep_crc.h |only s2-1.1.2/s2/src/absl/strings/internal/cord_rep_flat.h | 79 s2-1.1.2/s2/src/absl/strings/internal/cord_rep_ring.cc | 220 - s2-1.1.2/s2/src/absl/strings/internal/cord_rep_ring.h | 66 s2-1.1.2/s2/src/absl/strings/internal/cord_rep_ring_reader.h | 4 s2-1.1.2/s2/src/absl/strings/internal/cordz_functions.cc |only s2-1.1.2/s2/src/absl/strings/internal/cordz_functions.h |only s2-1.1.2/s2/src/absl/strings/internal/cordz_handle.cc |only s2-1.1.2/s2/src/absl/strings/internal/cordz_handle.h |only s2-1.1.2/s2/src/absl/strings/internal/cordz_info.cc |only s2-1.1.2/s2/src/absl/strings/internal/cordz_info.h |only s2-1.1.2/s2/src/absl/strings/internal/cordz_sample_token.cc |only s2-1.1.2/s2/src/absl/strings/internal/cordz_sample_token.h |only s2-1.1.2/s2/src/absl/strings/internal/cordz_statistics.h |only s2-1.1.2/s2/src/absl/strings/internal/cordz_update_scope.h |only s2-1.1.2/s2/src/absl/strings/internal/cordz_update_tracker.h |only s2-1.1.2/s2/src/absl/strings/internal/escaping.cc | 11 s2-1.1.2/s2/src/absl/strings/internal/ostringstream.cc | 2 s2-1.1.2/s2/src/absl/strings/internal/resize_uninitialized.h | 50 s2-1.1.2/s2/src/absl/strings/internal/str_format/arg.cc | 2 s2-1.1.2/s2/src/absl/strings/internal/str_format/arg.h | 10 s2-1.1.2/s2/src/absl/strings/internal/str_format/bind.cc | 7 s2-1.1.2/s2/src/absl/strings/internal/str_format/bind.h | 47 s2-1.1.2/s2/src/absl/strings/internal/str_format/checker.h | 9 s2-1.1.2/s2/src/absl/strings/internal/str_format/extension.cc | 21 s2-1.1.2/s2/src/absl/strings/internal/str_format/extension.h | 61 s2-1.1.2/s2/src/absl/strings/internal/str_format/output.h | 3 s2-1.1.2/s2/src/absl/strings/internal/str_format/parser.cc | 138 s2-1.1.2/s2/src/absl/strings/internal/str_format/parser.h | 46 s2-1.1.2/s2/src/absl/strings/internal/str_join_internal.h | 15 s2-1.1.2/s2/src/absl/strings/internal/str_split_internal.h | 68 s2-1.1.2/s2/src/absl/strings/internal/string_constant.h | 16 s2-1.1.2/s2/src/absl/strings/internal/utf8.cc | 18 s2-1.1.2/s2/src/absl/strings/numbers.cc | 18 s2-1.1.2/s2/src/absl/strings/numbers.h | 83 s2-1.1.2/s2/src/absl/strings/str_cat.cc | 8 s2-1.1.2/s2/src/absl/strings/str_cat.h | 33 s2-1.1.2/s2/src/absl/strings/str_format.h | 3 s2-1.1.2/s2/src/absl/strings/str_join.h | 22 s2-1.1.2/s2/src/absl/strings/str_split.h | 3 s2-1.1.2/s2/src/absl/strings/string_view.cc | 52 s2-1.1.2/s2/src/absl/strings/string_view.h | 164 - s2-1.1.2/s2/src/absl/strings/strip.h | 14 s2-1.1.2/s2/src/absl/strings/substitute.cc | 3 s2-1.1.2/s2/src/absl/strings/substitute.h | 185 - s2-1.1.2/s2/src/absl/synchronization/blocking_counter.cc | 40 s2-1.1.2/s2/src/absl/synchronization/blocking_counter.h | 8 s2-1.1.2/s2/src/absl/synchronization/internal/create_thread_identity.cc | 15 s2-1.1.2/s2/src/absl/synchronization/internal/create_thread_identity.h | 4 s2-1.1.2/s2/src/absl/synchronization/internal/per_thread_sem.cc | 4 s2-1.1.2/s2/src/absl/synchronization/internal/per_thread_sem.h | 7 s2-1.1.2/s2/src/absl/synchronization/internal/waiter.cc | 27 s2-1.1.2/s2/src/absl/synchronization/internal/waiter.h | 14 s2-1.1.2/s2/src/absl/synchronization/mutex.cc | 117 s2-1.1.2/s2/src/absl/synchronization/mutex.h | 32 s2-1.1.2/s2/src/absl/synchronization/notification.h | 5 s2-1.1.2/s2/src/absl/time/civil_time.cc | 4 s2-1.1.2/s2/src/absl/time/clock.cc | 2 s2-1.1.2/s2/src/absl/time/duration.cc | 9 s2-1.1.2/s2/src/absl/time/internal/cctz/include/cctz/civil_time_detail.h | 18 s2-1.1.2/s2/src/absl/time/internal/cctz/include/cctz/time_zone.h | 113 s2-1.1.2/s2/src/absl/time/internal/cctz/src/time_zone_fixed.cc | 2 s2-1.1.2/s2/src/absl/time/internal/cctz/src/time_zone_format.cc | 15 s2-1.1.2/s2/src/absl/time/internal/cctz/src/time_zone_if.h | 3 s2-1.1.2/s2/src/absl/time/internal/cctz/src/time_zone_info.cc | 104 s2-1.1.2/s2/src/absl/time/internal/cctz/src/time_zone_lookup.cc | 49 s2-1.1.2/s2/src/absl/time/internal/cctz/src/tzfile.h | 2 s2-1.1.2/s2/src/absl/time/internal/cctz/src/zone_info_source.cc | 5 s2-1.1.2/s2/src/absl/time/internal/zoneinfo.inc | 951 +++--- s2-1.1.2/s2/src/absl/time/time.h | 129 s2-1.1.2/s2/src/absl/types/any.h | 23 s2-1.1.2/s2/src/absl/types/bad_optional_access.h | 2 s2-1.1.2/s2/src/absl/types/bad_variant_access.h | 4 s2-1.1.2/s2/src/absl/types/internal/conformance_profile.h | 2 s2-1.1.2/s2/src/absl/types/internal/optional.h | 8 s2-1.1.2/s2/src/absl/types/internal/variant.h | 6 s2-1.1.2/s2/src/absl/types/optional.h | 31 s2-1.1.2/s2/src/absl/types/span.h | 9 s2-1.1.2/s2/src/s2/base/mutex.h | 39 s2-1.1.2/s2/src/s2geography/build.cc | 20 s2-1.1.2/s2/src/s2geography/geography.h | 2 s2-1.1.2/s2/tests/testthat/test-s2-cell.R | 2 s2-1.1.2/s2/tests/testthat/test-s2-transformers.R | 7 209 files changed, 7502 insertions(+), 5631 deletions(-)
Title: Test, Document, Containerise, and Deploy R Packages
Description: Continuous integration for R packages.
Automates testing, documentation website building,
and containerised deployment.
Author: Brian Schilder [aut, cre] ,
Alan Murphy [aut, ctb] ,
Nathan Skene [aut]
Maintainer: Brian Schilder <brian_schilder@alumni.brown.edu>
Diff between rworkflows versions 0.99.3 dated 2022-12-21 and 0.99.5 dated 2023-01-12
rworkflows-0.99.3/rworkflows/inst/rworkflows_0.99.2.pdf |only rworkflows-0.99.5/rworkflows/DESCRIPTION | 25 +- rworkflows-0.99.5/rworkflows/MD5 | 55 +++-- rworkflows-0.99.5/rworkflows/NAMESPACE | 4 rworkflows-0.99.5/rworkflows/NEWS.md | 49 ++++ rworkflows-0.99.5/rworkflows/R/bioc_r_versions.R |only rworkflows-0.99.5/rworkflows/R/construct_runners.R |only rworkflows-0.99.5/rworkflows/R/construct_runners_check_args.R |only rworkflows-0.99.5/rworkflows/R/construct_runners_check_cont.R |only rworkflows-0.99.5/rworkflows/R/fill_yaml.R | 9 rworkflows-0.99.5/rworkflows/R/get_hex.R | 9 rworkflows-0.99.5/rworkflows/R/use_badges.R | 22 +- rworkflows-0.99.5/rworkflows/R/use_issue_template.R |only rworkflows-0.99.5/rworkflows/R/use_workflow.R | 34 ++- rworkflows-0.99.5/rworkflows/README.md | 59 ++++- rworkflows-0.99.5/rworkflows/inst/CITATION | 12 - rworkflows-0.99.5/rworkflows/inst/doc/depgraph.html | 8 rworkflows-0.99.5/rworkflows/inst/doc/docker.html | 12 - rworkflows-0.99.5/rworkflows/inst/doc/repos.html | 12 - rworkflows-0.99.5/rworkflows/inst/doc/rworkflows.Rmd | 12 + rworkflows-0.99.5/rworkflows/inst/doc/rworkflows.html | 105 +++++----- rworkflows-0.99.5/rworkflows/inst/rworkflows_0.99.5.pdf |only rworkflows-0.99.5/rworkflows/inst/templates/Dockerfile | 2 rworkflows-0.99.5/rworkflows/inst/templates/bug_report.md |only rworkflows-0.99.5/rworkflows/inst/templates/feature_request.md |only rworkflows-0.99.5/rworkflows/inst/templates/rworkflows_template.yml | 1 rworkflows-0.99.5/rworkflows/man/bioc_r_versions.Rd |only rworkflows-0.99.5/rworkflows/man/construct_runners.Rd |only rworkflows-0.99.5/rworkflows/man/use_badges.Rd | 4 rworkflows-0.99.5/rworkflows/man/use_issue_template.Rd |only rworkflows-0.99.5/rworkflows/man/use_workflow.Rd | 10 rworkflows-0.99.5/rworkflows/tests/testthat/test-bioc_r_versions.R |only rworkflows-0.99.5/rworkflows/tests/testthat/test-construct_runners.R |only rworkflows-0.99.5/rworkflows/tests/testthat/test-use_issue_template.R |only rworkflows-0.99.5/rworkflows/tests/testthat/test-use_workflow.R | 29 ++ rworkflows-0.99.5/rworkflows/vignettes/rworkflows.Rmd | 12 + 36 files changed, 346 insertions(+), 139 deletions(-)
Title: Exploratory Analysis of Genetic and Genomic Data
Description: Toolset for the exploration of genetic and genomic
data. Adegenet provides formal (S4) classes for storing and handling
various genetic data, including genetic markers with varying ploidy
and hierarchical population structure ('genind' class), alleles counts
by populations ('genpop'), and genome-wide SNP data ('genlight'). It
also implements original multivariate methods (DAPC, sPCA), graphics,
statistical tests, simulation tools, distance and similarity measures,
and several spatial methods. A range of both empirical and simulated
datasets is also provided to illustrate various methods.
Author: Thibaut Jombart [aut] ,
Zhian N. Kamvar [aut, cre] ,
Caitlin Collins [ctb],
Roman Lustrik [ctb],
Marie-Pauline Beugin [ctb],
Brian J. Knaus [ctb],
Peter Solymos [ctb],
Vladimir Mikryukov [ctb],
Klaus Schliep [ctb],
Tiago Maie [ctb],
Libor Morkovsky [ [...truncated...]
Maintainer: Zhian N. Kamvar <zkamvar@gmail.com>
Diff between adegenet versions 2.1.8 dated 2022-10-02 and 2.1.9 dated 2023-01-12
ChangeLog | 7 +++++++ DESCRIPTION | 6 +++--- MD5 | 34 +++++++++++++++++----------------- README.md | 2 -- build/partial.rdb |binary data/H3N2.rda |binary data/dapcIllus.rda |binary data/eHGDP.rda |binary data/hybridtoy.RData |binary data/microbov.rda |binary data/nancycats.rda |binary data/rupica.RData |binary data/sim2pop.rda |binary data/spcaIllus.rda |binary data/swallowtails.rda |binary src/GLfunctions.c | 2 +- src/adesub.c | 2 +- src/monmonier-utils.c | 3 +-- 18 files changed, 30 insertions(+), 26 deletions(-)
Title: Generate Publication Ready Visualizations of Single Cell
Transcriptomics Data
Description: A system that provides a streamlined way of generating publication ready plots for known Single-Cell transcriptomics data in a “publication ready” format. This is, the goal is to automatically generate plots with the highest quality possible, that can be used right away or with minimal modifications for a research article.
Author: Enrique Blanco-Carmona [cre, aut]
Maintainer: Enrique Blanco-Carmona <scpubr@gmail.com>
Diff between SCpubr versions 1.1.0 dated 2023-01-11 and 1.1.1 dated 2023-01-12
DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ NEWS.md | 8 +++++++- R/utils.R | 11 ++++++----- README.md | 2 +- tests/testthat/setup.R | 17 +++++++++++++---- tests/testthat/test-do_EnrichmentHeatmap.R | 1 + 7 files changed, 37 insertions(+), 20 deletions(-)
Title: Query 'SWI'-'Prolog' from R
Description: This R package connects to 'SWI'-'Prolog', <https://www.swi-prolog.org/>, so that R can send deterministic and non-deterministic queries to 'prolog' ('consult', 'query'/'submit', 'once', 'findall').
Author: Matthias Gondan [aut, com, cre]
Maintainer: Matthias Gondan <Matthias.Gondan-Rochon@uibk.ac.at>
Diff between rolog versions 0.9.9 dated 2023-01-06 and 0.9.10 dated 2023-01-12
DESCRIPTION | 11 +++++----- MD5 | 30 ++++++++++++++-------------- NEWS.md | 5 ++++ R/RcppExports.R | 12 +++++------ R/findall.R | 11 +++++++--- R/once.R | 9 ++++++-- R/query.R | 9 ++++++-- R/rolog.R | 55 ++++++++++++++++++++++++++-------------------------- inst/doc/rolog.Rmd | 3 ++ inst/doc/rolog.html | 24 ++++++++++++++-------- man/findall.Rd | 6 ++++- man/once.Rd | 6 ++++- man/query.Rd | 6 ++++- src/RcppExports.cpp | 27 ++++++++++++++----------- src/rolog.cpp | 39 ++++++++++++++++++++++-------------- vignettes/rolog.Rmd | 3 ++ 16 files changed, 157 insertions(+), 99 deletions(-)
Title: Analysis of Conflicting Claims
Description: The analysis of conflicting claims arises when an amount has to be divided among a set of agents with claims that exceed what is available. A rule is a way of selecting a division among the claimants. This package computes the main rules introduced in the literature from the old times until nowadays. The inventory of rules covers the proportional and the adjusted proportional rules, the constrained equal awards and the constrained equal losses rules, the constrained egalitarian, the Piniles’ and the minimal overlap rules, the random arrival and the Talmud rules. Besides, the Dominguez and Thomson and the average of awards rules are also included. All of them can be found in the book of W. Thomson (2019), 'How to divide when there isn't enough. From Aristotle, the Talmud, and Maimonides to the axiomatics of resource allocation', with the exception of the average of awards rule (Mirás Calvo et al. (2022), <doi:10.1007/s00355-022-01414-6>). In addition, graphical diagrams allow t [...truncated...]
Author: Iago Nunez Lugilde [aut, cre] ,
Miguel Ángel Miras Calvo [aut] ,
Carmen Quinteiro Sandomingo [aut] ,
Estela Sanchez Rodriguez [aut]
Maintainer: Iago Nunez Lugilde <iago.nunez.lugilde@uvigo.es>
Diff between ClaimsProblems versions 0.2.0 dated 2022-06-03 and 0.2.1 dated 2023-01-12
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- NAMESPACE | 2 +- R/setofawards.R | 4 ++-- build/partial.rdb |binary 5 files changed, 10 insertions(+), 10 deletions(-)
More information about ClaimsProblems at CRAN
Permanent link
Title: Fast Unified Random Forests for Survival, Regression, and
Classification (RF-SRC)
Description: Fast OpenMP parallel computing of Breiman's random forests for univariate, multivariate, unsupervised, survival, competing risks, class imbalanced classification and quantile regression. New Mahalanobis splitting for correlated outcomes. Extreme random forests and randomized splitting. Suite of imputation methods for missing data. Fast random forests using subsampling. Confidence regions and standard errors for variable importance. New improved holdout importance. Case-specific importance. Minimal depth variable importance. Visualize trees on your Safari or Google Chrome browser. Anonymous random forests for data privacy.
Author: Hemant Ishwaran <hemant.ishwaran@gmail.com>, Udaya B. Kogalur <ubk@kogalur.com>
Maintainer: Udaya B. Kogalur <ubk@kogalur.com>
Diff between randomForestSRC versions 3.1.1 dated 2022-07-06 and 3.2.0 dated 2023-01-12
DESCRIPTION | 8 MD5 | 98 - R/generic.predict.rfsrc.R | 87 - R/imbalanced.rfsrc.R | 17 R/impute.rfsrc.R | 1 R/partial.rfsrc.R | 18 R/plot.subsample.rfsrc.R | 40 R/quantreg.rfsrc.R | 130 - R/rfsrc.R | 73 - R/sidClustering.rfsrc.R | 11 R/subsample.rfsrc.R | 455 ------ R/tune.nodesize.rfsrc.R | 42 R/tune.rfsrc.R | 52 R/utilities.R | 96 - R/utilities.data.R | 238 +-- R/utilities.imbalanced.R | 4 R/utilities.impute.R |only R/utilities.performance.R | 27 R/utilities.quantreg.R |only R/utilities.subsample.R |only R/utilities.subsample.bootstrap.R |only R/utilities.survival.R | 94 + R/vimp.rfsrc.R | 2 configure | 18 configure.ac | 2 data/breast.rda |binary data/follic.rda |binary data/hd.rda |binary data/housing.rda |binary data/nutrigenomic.rda |binary data/pbc.rda |binary data/peakVO2.rda |binary data/vdv.rda |binary data/veteran.rda |binary data/wihs.rda |binary data/wine.rda |binary inst/NEWS | 25 man/imbalanced.rfsrc.Rd | 65 man/plot.subsample.rfsrc.Rd | 4 man/predict.rfsrc.Rd | 4 man/quantreg.rfsrc.Rd | 91 - man/randomForestSRC_package.Rd | 4 man/rfsrc.Rd | 32 man/sidClustering.rfsrc.Rd | 2 man/subsample.rfsrc.Rd | 53 man/tune.rfsrc.Rd | 20 man/vimp.rfsrc.Rd | 12 src/R_init_randomForestSRC.c | 2 src/randomForestSRC.c | 2475 ++++++++++++++++++++++++++++---------- src/randomForestSRC.h | 140 +- src/splitCustom.c | 2 src/splitCustom.h | 2 52 files changed, 2727 insertions(+), 1719 deletions(-)
More information about randomForestSRC at CRAN
Permanent link
Title: Graphic Devices Based on AGG
Description: Anti-Grain Geometry (AGG) is a high-quality and
high-performance 2D drawing library. The 'ragg' package provides a set
of graphic devices based on AGG to use as alternative to the raster
devices provided through the 'grDevices' package.
Author: Thomas Lin Pedersen [cre, aut]
,
Maxim Shemanarev [aut, cph] ,
Tony Juricic [ctb, cph] ,
Milan Marusinec [ctb, cph] ,
Spencer Garrett [ctb] ,
RStudio [cph, fnd]
Maintainer: Thomas Lin Pedersen <thomas.pedersen@posit.co>
Diff between ragg versions 1.2.4 dated 2022-10-24 and 1.2.5 dated 2023-01-12
DESCRIPTION | 10 +++++----- MD5 | 10 +++++----- NEWS.md | 8 ++++++++ R/aaa.R | 9 +++++++++ configure | 2 +- src/agg/src/agg_font_freetype.cpp | 30 +++++++++++++++++------------- 6 files changed, 45 insertions(+), 24 deletions(-)
Title: Population Downscaling Using Areal Interpolation
Description: Downscaling of population data obtained
by census surveys using areal interpolation. Given a
set of source zone polygons such as
census tracts or city blocks alongside with population counts and a
target zone of incogruent yet superimposed polygon features (such as
individual buildings) populR transforms population counts from the
former to the latter using Areal Weighting and Volume Weighting
Interpolation methods.
Author: Marios Batsaris
Maintainer: Marios Batsaris <m.batsaris@aegean.gr>
Diff between populR versions 0.1.6 dated 2022-08-09 and 0.2.0 dated 2023-01-12
populR-0.1.6/populR/inst/extdata |only populR-0.2.0/populR/DESCRIPTION | 14 populR-0.2.0/populR/MD5 | 46 - populR-0.2.0/populR/NAMESPACE | 51 - populR-0.2.0/populR/R/pp_ancillary.R |only populR-0.2.0/populR/R/pp_estimate.R | 63 + populR-0.2.0/populR/R/pp_vgi.R |only populR-0.2.0/populR/R/utils.R | 103 ++ populR-0.2.0/populR/build/vignette.rds |binary populR-0.2.0/populR/inst/doc/areal-interpolation-comparison.html | 454 +--------- populR-0.2.0/populR/man/pp_ancillary.Rd |only populR-0.2.0/populR/man/pp_compare.Rd | 94 +- populR-0.2.0/populR/man/pp_estimate.Rd | 139 +-- populR-0.2.0/populR/man/pp_round.Rd | 94 +- populR-0.2.0/populR/man/pp_vgi.Rd |only populR-0.2.0/populR/man/src.Rd | 48 - populR-0.2.0/populR/man/trg.Rd | 56 - populR-0.2.0/populR/tests/testthat.R | 8 populR-0.2.0/populR/tests/testthat/Rplots.pdf |binary 19 files changed, 515 insertions(+), 655 deletions(-)
Title: Multi-Way Component Analysis
Description: For single tensor data, any matrix factorization method can be specified the matricised tensor in each dimension by Multi-way Component Analysis (MWCA). An originally extended MWCA is also implemented to specify and decompose multiple matrices and tensors simultaneously (CoupledMWCA). See the reference section of GitHub README.md <https://github.com/rikenbit/mwTensor>, for details of the methods.
Author: Koki Tsuyuzaki [aut, cre]
Maintainer: Koki Tsuyuzaki <k.t.the-answer@hotmail.co.jp>
Diff between mwTensor versions 0.99.6 dated 2022-06-15 and 1.0.0 dated 2023-01-12
mwTensor-0.99.6/mwTensor/README.md |only mwTensor-1.0.0/mwTensor/DESCRIPTION | 9 mwTensor-1.0.0/mwTensor/LICENSE |only mwTensor-1.0.0/mwTensor/MD5 | 28 + mwTensor-1.0.0/mwTensor/NAMESPACE | 2 mwTensor-1.0.0/mwTensor/R/AllClasses.R | 55 --- mwTensor-1.0.0/mwTensor/R/defaultCoupledMWCAParams.R |only mwTensor-1.0.0/mwTensor/R/defaultMWCAParams.R |only mwTensor-1.0.0/mwTensor/R/mwTensor-internal.R | 2 mwTensor-1.0.0/mwTensor/build/partial.rdb |binary mwTensor-1.0.0/mwTensor/inst/NEWS | 8 mwTensor-1.0.0/mwTensor/man/defaultCoupledMWCAParams.Rd |only mwTensor-1.0.0/mwTensor/man/defaultMWCAParams.Rd |only mwTensor-1.0.0/mwTensor/tests/testthat.R | 2 mwTensor-1.0.0/mwTensor/tests/testthat/test_CoupledMWCA_common.R | 145 ++++++--- mwTensor-1.0.0/mwTensor/tests/testthat/test_CoupledMWCA_specific.R | 159 ++++++---- mwTensor-1.0.0/mwTensor/tests/testthat/test_MWCA.R | 55 ++- mwTensor-1.0.0/mwTensor/tests/testthat/test_defaultCoupledMWCAParams.R |only mwTensor-1.0.0/mwTensor/tests/testthat/test_defaultMWCAParams.R |only 19 files changed, 274 insertions(+), 191 deletions(-)
Title: Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM,
PBS/Torque)
Description: Evaluate arbitrary function calls using workers on HPC schedulers
in single line of code. All processing is done on the network without
accessing the file system. Remote schedulers are supported via SSH.
Author: Michael Schubert [aut, cre]
Maintainer: Michael Schubert <mschu.dev@gmail.com>
Diff between clustermq versions 0.8.95.3 dated 2022-01-26 and 0.8.95.4 dated 2023-01-12
DESCRIPTION | 6 MD5 | 26 R/foreach.r | 2 R/qsys.r | 2 R/qsys_ssh.r | 2 R/util.r | 24 R/work_chunk.r | 2 build/vignette.rds |binary inst/doc/quickstart.html | 476 +++++++++++++---- inst/doc/technicaldocs.html | 491 +++++++++++++---- inst/doc/userguide.R | 97 +-- inst/doc/userguide.Rmd | 191 +++++- inst/doc/userguide.html | 1209 +++++++++++++++++++++++++++++++------------- vignettes/userguide.Rmd | 191 +++++- 14 files changed, 1982 insertions(+), 737 deletions(-)
Title: Basic and Advanced Statistical Power Analysis
Description: This is a collection of tools for conducting both basic and advanced statistical power analysis including correlation, proportion, t-test, one-way ANOVA, two-way ANOVA, linear regression, logistic regression, Poisson regression, mediation analysis, longitudinal data analysis, structural equation modeling and multilevel modeling. It also serves as the engine for conducting power analysis online at <https://webpower.psychstat.org>.
Author: Zhiyong Zhang [aut, cre],
Yujiao Mai [aut],
Miao Yang [ctb]
Maintainer: Zhiyong Zhang <johnnyzhz@gmail.com>
Diff between WebPower versions 0.8.6 dated 2022-08-15 and 0.8.7 dated 2023-01-12
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/webpower.R | 4 ++-- man/wp.mc.sem.boot.Rd | 3 ++- 4 files changed, 11 insertions(+), 10 deletions(-)
Title: Send Email Using R
Description: Package contains a simple SMTP client with minimal dependencies which
provides a portable solution for sending email, including file attachments and inline html reports,
from within R. SMTP Authentication and SSL/STARTTLS is implemented using curl.
Author: Olaf Mersmann [aut, cre] ,
Quinn Weber [ctb],
Marius Barth [ctb] ,
Are Edvardsen [ctb] ,
Alexander Bartel [ctb]
Maintainer: Olaf Mersmann <olafm@p-value.net>
Diff between sendmailR versions 1.3-2 dated 2023-01-06 and 1.4-0 dated 2023-01-12
DESCRIPTION | 16 ++++--- MD5 | 13 ++++-- R/sendmailR.r | 116 ++++++++++++++++++++++++++++++++++++++++++++++++++------ README.md | 30 ++++++++++++-- build |only inst |only man/sendmail.Rd | 29 +++++++++++++- vignettes |only 8 files changed, 174 insertions(+), 30 deletions(-)
Title: Legacy 'Ryacas' (Interface to 'Yacas' Computer Algebra System)
Description: A legacy version of 'Ryacas', an interface to the 'yacas' computer algebra system (<http://www.yacas.org/>).
Author: Mikkel Meyer Andersen [aut, cre, cph],
Rob Goedman [aut, cph],
Gabor Grothendieck [aut, cph],
Soeren Hoejsgaard [aut, cph],
Grzegorz Mazur [aut, cph],
Ayal Pinkus [aut, cph],
Nemanja Trifunovic [cph] )
Maintainer: Mikkel Meyer Andersen <mikl@math.aau.dk>
Diff between Ryacas0 versions 0.4.3 dated 2020-09-29 and 0.4.4 dated 2023-01-12
DESCRIPTION | 8 MD5 | 32 - R/ryacas-package.R | 2 R/yacas.R | 2 R/yacmode.R | 2 build/vignette.rds |binary inst/NEWS | 4 inst/doc/elaborate-reference.html | 718 ++++++++++++++++++++---------------- inst/doc/getting-started.html | 216 ++++++---- inst/doc/latent-variable-model.html | 260 ++++++++----- inst/doc/ssm-matrix.html | 326 ++++++++++------ inst/doc/sym-matrix-vector.html | 232 ++++++----- man/yacas.Rd | 2 man/yacasTranslations.Rd | 2 man/yacmode.Rd | 2 src/RcppExports.cpp | 5 src/yacas/src/lispenvironment.cpp | 2 17 files changed, 1081 insertions(+), 734 deletions(-)
Title: Multivariate Menu for Radiant: Business Analytics using R and
Shiny
Description: The Radiant Multivariate menu includes interfaces for perceptual
mapping, factor analysis, cluster analysis, and conjoint analysis. The
application extends the functionality in 'radiant.data'.
Author: Vincent Nijs [aut, cre]
Maintainer: Vincent Nijs <radiant@rady.ucsd.edu>
Diff between radiant.multivariate versions 1.4.4 dated 2022-07-23 and 1.5.0 dated 2023-01-12
DESCRIPTION | 14 +-- MD5 | 38 ++++----- NEWS.md | 8 + R/conjoint.R | 126 ++++++++++++++++--------------- R/full_factor.R | 69 +++++++--------- R/hclus.R | 51 ++++++------ R/kclus.R | 109 ++++++++++++++------------ R/mds.R | 47 ++++++----- R/pre_factor.R | 41 +++++----- R/prmap.R | 84 ++++++++++---------- README.md | 6 - inst/app/tools/analysis/conjoint_ui.R | 46 +++++------ inst/app/tools/analysis/full_factor_ui.R | 2 inst/app/tools/analysis/hclus_ui.R | 8 - inst/app/tools/analysis/kclus_ui.R | 8 - inst/app/tools/analysis/prmap_ui.R | 6 - man/plot.full_factor.Rd | 2 man/plot.prmap.Rd | 3 man/summary.full_factor.Rd | 2 man/summary.prmap.Rd | 5 - 20 files changed, 353 insertions(+), 322 deletions(-)
More information about radiant.multivariate at CRAN
Permanent link
Title: Variable Selection in Partial Least Squares
Description: Interfaces and methods for variable selection in Partial Least
Squares. The methods include filter methods, wrapper methods and embedded
methods. Both regression and classification is supported.
Author: Kristian Hovde Liland [aut, cre]
,
Tahir Mehmood [ctb],
Solve Saeboe [ctb]
Maintainer: Kristian Hovde Liland <kristian.liland@nmbu.no>
Diff between plsVarSel versions 0.9.9 dated 2022-10-29 and 0.9.10 dated 2023-01-12
DESCRIPTION | 10 +++++----- MD5 | 8 ++++---- NEWS | 4 ++++ R/filters.R | 13 +++++++++++-- man/VIP.Rd | 6 ++++++ 5 files changed, 30 insertions(+), 11 deletions(-)
Title: Assessment of Regression Models Performance
Description: Utilities for computing measures to assess model quality,
which are not directly provided by R's 'base' or 'stats' packages.
These include e.g. measures like r-squared, intraclass correlation
coefficient (Nakagawa, Johnson & Schielzeth (2017)
<doi:10.1098/rsif.2017.0213>), root mean squared error or functions to
check models for overdispersion, singularity or zero-inflation and
more. Functions apply to a large variety of regression models,
including generalized linear models, mixed effects models and Bayesian
models. References: Lüdecke et al. (2021) <doi:10.21105/joss.03139>.
Author: Daniel Luedecke [aut, cre] ,
Dominique Makowski [aut, ctb] ,
Mattan S. Ben-Shachar [aut, ctb]
,
Indrajeet Patil [aut, ctb] ,
Philip Waggoner [aut, ctb] ,
Brenton M. Wiernik [aut, ctb] ,
Vincent Arel-Bundock [ctb] ,
Remi Theriault [ctb] ,
Martin Jullum [...truncated...]
Maintainer: Daniel Luedecke <d.luedecke@uke.de>
Diff between performance versions 0.10.1 dated 2022-11-25 and 0.10.2 dated 2023-01-12
performance-0.10.1/performance/tests/testthat/helper-requiet.R |only performance-0.10.2/performance/DESCRIPTION | 22 - performance-0.10.2/performance/MD5 | 184 +++++----- performance-0.10.2/performance/NAMESPACE | 5 performance-0.10.2/performance/NEWS.md | 19 + performance-0.10.2/performance/R/binned_residuals.R | 6 performance-0.10.2/performance/R/check_collinearity.R | 65 +-- performance-0.10.2/performance/R/check_heterogeneity_bias.R | 2 performance-0.10.2/performance/R/check_homogeneity.R | 10 performance-0.10.2/performance/R/check_itemscale.R | 8 performance-0.10.2/performance/R/check_model.R | 18 performance-0.10.2/performance/R/check_model_diagnostics.R | 9 performance-0.10.2/performance/R/check_multimodal.R | 4 performance-0.10.2/performance/R/check_normality.R | 32 + performance-0.10.2/performance/R/check_outliers.R | 123 +++--- performance-0.10.2/performance/R/check_overdispersion.R | 36 - performance-0.10.2/performance/R/check_singularity.R | 70 +-- performance-0.10.2/performance/R/check_sphericity.R | 4 performance-0.10.2/performance/R/check_zeroinflation.R | 4 performance-0.10.2/performance/R/icc.R | 8 performance-0.10.2/performance/R/item_difficulty.R | 60 ++- performance-0.10.2/performance/R/model_performance.R | 15 performance-0.10.2/performance/R/model_performance.bayesian.R | 52 +- performance-0.10.2/performance/R/model_performance.lavaan.R | 36 - performance-0.10.2/performance/R/model_performance.rma.R | 22 - performance-0.10.2/performance/R/performance-package.R |only performance-0.10.2/performance/R/performance_accuracy.R | 32 + performance-0.10.2/performance/R/performance_aicc.R | 2 performance-0.10.2/performance/R/performance_cv.R | 14 performance-0.10.2/performance/R/performance_pcp.R | 6 performance-0.10.2/performance/R/performance_roc.R | 24 - performance-0.10.2/performance/R/r2.R | 6 performance-0.10.2/performance/R/r2_bayes.R | 7 performance-0.10.2/performance/R/r2_nakagawa.R | 2 performance-0.10.2/performance/R/r2_somers.R | 6 performance-0.10.2/performance/R/test_performance.R | 13 performance-0.10.2/performance/man/check_collinearity.Rd | 4 performance-0.10.2/performance/man/check_overdispersion.Rd | 24 - performance-0.10.2/performance/man/check_singularity.Rd | 38 +- performance-0.10.2/performance/man/figures/unnamed-chunk-14-1.png |binary performance-0.10.2/performance/man/figures/unnamed-chunk-20-1.png |binary performance-0.10.2/performance/man/item_difficulty.Rd | 31 + performance-0.10.2/performance/man/model_performance.lavaan.Rd | 15 performance-0.10.2/performance/man/model_performance.rma.Rd | 14 performance-0.10.2/performance/man/model_performance.stanreg.Rd | 44 -- performance-0.10.2/performance/man/performance-package.Rd |only performance-0.10.2/performance/man/performance_roc.Rd | 16 performance-0.10.2/performance/man/r2_somers.Rd | 2 performance-0.10.2/performance/man/test_performance.Rd | 2 performance-0.10.2/performance/tests/testthat/_snaps |only performance-0.10.2/performance/tests/testthat/helper.R |only performance-0.10.2/performance/tests/testthat/test-backticks.R | 22 - performance-0.10.2/performance/tests/testthat/test-check_collinearity.R | 37 +- performance-0.10.2/performance/tests/testthat/test-check_convergence.R | 2 performance-0.10.2/performance/tests/testthat/test-check_homogeneity.R | 60 +-- performance-0.10.2/performance/tests/testthat/test-check_itemscale.R |only performance-0.10.2/performance/tests/testthat/test-check_model.R | 10 performance-0.10.2/performance/tests/testthat/test-check_normality.R | 2 performance-0.10.2/performance/tests/testthat/test-check_outliers.R | 48 +- performance-0.10.2/performance/tests/testthat/test-check_overdispersion.R | 2 performance-0.10.2/performance/tests/testthat/test-check_singularity.R | 2 performance-0.10.2/performance/tests/testthat/test-check_sphericity.R | 58 +-- performance-0.10.2/performance/tests/testthat/test-check_zeroinflation.R | 5 performance-0.10.2/performance/tests/testthat/test-checks.R | 2 performance-0.10.2/performance/tests/testthat/test-compare_performance.R | 104 ++--- performance-0.10.2/performance/tests/testthat/test-coxph.R | 2 performance-0.10.2/performance/tests/testthat/test-cronbachs_alpha.R | 47 +- performance-0.10.2/performance/tests/testthat/test-icc.R | 13 performance-0.10.2/performance/tests/testthat/test-item_difficulty.R | 57 ++- performance-0.10.2/performance/tests/testthat/test-item_intercor.R | 14 performance-0.10.2/performance/tests/testthat/test-item_reliability.R | 38 -- performance-0.10.2/performance/tests/testthat/test-item_splithalf.R | 38 -- performance-0.10.2/performance/tests/testthat/test-model_performance-various.R | 12 performance-0.10.2/performance/tests/testthat/test-model_performance.bayesian.R | 13 performance-0.10.2/performance/tests/testthat/test-model_performance.fixest.R | 2 performance-0.10.2/performance/tests/testthat/test-model_performance.gam.R | 2 performance-0.10.2/performance/tests/testthat/test-model_performance.kmeans.R | 80 ++-- performance-0.10.2/performance/tests/testthat/test-model_performance.lm.R | 58 +-- performance-0.10.2/performance/tests/testthat/test-model_performance.merMod.R | 8 performance-0.10.2/performance/tests/testthat/test-model_performance.rma.R | 2 performance-0.10.2/performance/tests/testthat/test-performance_aic.R | 18 performance-0.10.2/performance/tests/testthat/test-performance_cv.R | 28 - performance-0.10.2/performance/tests/testthat/test-performance_roc.R | 10 performance-0.10.2/performance/tests/testthat/test-r2.R | 78 ++-- performance-0.10.2/performance/tests/testthat/test-r2_bayes.R | 2 performance-0.10.2/performance/tests/testthat/test-r2_coxsnell.R | 10 performance-0.10.2/performance/tests/testthat/test-r2_kullback.R | 12 performance-0.10.2/performance/tests/testthat/test-r2_mcfadden.R | 2 performance-0.10.2/performance/tests/testthat/test-r2_nagelkerke.R | 2 performance-0.10.2/performance/tests/testthat/test-r2_nakagawa.R | 2 performance-0.10.2/performance/tests/testthat/test-r2_tjur.R | 18 performance-0.10.2/performance/tests/testthat/test-r2_zeroinflated.R | 2 performance-0.10.2/performance/tests/testthat/test-rmse.R | 2 performance-0.10.2/performance/tests/testthat/test-roc.R | 33 - performance-0.10.2/performance/tests/testthat/test-test_performance.R | 4 performance-0.10.2/performance/tests/testthat/test-test_vuong.R | 101 ++--- 96 files changed, 1144 insertions(+), 1036 deletions(-)
Title: Interface to OGC Web-Services (OWS)
Description: Provides an Interface to Web-Services defined as standards by the Open Geospatial Consortium (OGC), including Web Feature Service
(WFS) for vector data, Web Coverage Service (WCS), Catalogue Service (CSW) for ISO/OGC metadata, Web Processing Service (WPS) for data processes,
and associated standards such as the common web-service specification (OWS) and OGC Filter Encoding. Partial support is provided for the Web Map
Service (WMS). The purpose is to add support for additional OGC service standards such as Web Coverage Processing Service (WCPS), the Sensor
Observation Service (SOS), or even new standard services emerging such OGC API or SensorThings.
Author: Emmanuel Blondel [aut, cre] ,
Alexandre Bennici [ctb] ,
Norbert Billet [ctb]
Maintainer: Emmanuel Blondel <emmanuel.blondel1@gmail.com>
Diff between ows4R versions 0.3-2 dated 2022-11-08 and 0.3-3 dated 2023-01-12
DESCRIPTION | 8 ++++---- MD5 | 24 ++++++++++++------------ NEWS.md | 6 ++++++ R/CSWClient.R | 2 +- R/WFSClient.R | 2 +- R/WFSFeatureType.R | 2 +- R/WMSClient.R | 2 +- R/WPSClient.R | 2 +- README.md | 6 +++--- man/CSWClient.Rd | 2 +- man/WFSClient.Rd | 2 +- man/WMSClient.Rd | 2 +- man/WPSClient.Rd | 2 +- 13 files changed, 34 insertions(+), 28 deletions(-)
Title: Extension to 'ggplot2' for Plotting Stats
Description: Provides suite of functions to plot regression model coefficients
("forest plots"). The suite also includes new statistics to compute
proportions, weighted mean and cross-tabulation statistics, as well as new
geometries to add alternative background color to a plot.
Author: Joseph Larmarange [aut, cre]
Maintainer: Joseph Larmarange <joseph@larmarange.net>
Diff between ggstats versions 0.2.0 dated 2023-01-06 and 0.2.1 dated 2023-01-12
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS.md | 4 ++++ R/geom_stripped_rows.R | 25 +++++++++++++++++++++++-- 4 files changed, 33 insertions(+), 8 deletions(-)
Title: A GeoJson Processing Toolkit
Description: Includes functions for processing GeoJson objects <https://en.wikipedia.org/wiki/GeoJSON> relying on 'RFC 7946' <https://datatracker.ietf.org/doc/pdf/rfc7946.pdf>. The geojson encoding is based on 'json11', a tiny JSON library for 'C++11' <https://github.com/dropbox/json11>. Furthermore, the source code is exported in R through the 'Rcpp' and 'RcppArmadillo' packages.
Author: Lampros Mouselimis [aut, cre] ,
Dropbox Inc [cph]
Maintainer: Lampros Mouselimis <mouselimislampros@gmail.com>
Diff between geojsonR versions 1.1.0 dated 2021-05-04 and 1.1.1 dated 2023-01-12
DESCRIPTION | 13 MD5 | 20 NEWS.md | 5 README.md | 22 - build/vignette.rds |binary inst/doc/the_geojsonR_package.Rmd | 4 inst/doc/the_geojsonR_package.html | 784 ++++++++++++++----------------------- man/TO_GeoJson.Rd | 66 +-- src/RcppExports.cpp | 5 src/json11.cpp | 17 vignettes/the_geojsonR_package.Rmd | 4 11 files changed, 395 insertions(+), 545 deletions(-)
Title: R Bindings to the 'Fstlib' Library
Description: The 'fstlib' library provides multithreaded serialization of compressed data frames using the
'fst' format. The 'fst' format allows for random access of stored data and compression with the 'LZ4' and 'ZSTD'
compressors.
Author: Mark Klik [aut, cre, cph] ,
Yuta Mori [ctb, cph] ,
Przemyslaw Skibinski [ctb, cph] ,
Tino Reichardt [ctb, cph] ,
Yann Collet [ctb, cph] ,
Facebook, Inc. [cph]
Maintainer: Mark Klik <markklik@gmail.com>
Diff between fstcore versions 0.9.12 dated 2022-03-23 and 0.9.14 dated 2023-01-12
DESCRIPTION | 10 MD5 | 28 - NEWS.md | 14 configure | 2 src/Makevars.ucrt | 4 src/fstlib/CMakeLists.txt |only src/fstlib/LZ4/CMakeLists.txt |only src/fstlib/LZ4/LICENSE | 48 +- src/fstlib/LZ4/lz4.c | 617 +++++++++++++++++++++++------------ src/fstlib/LZ4/lz4.h | 160 ++++++--- src/fstlib/ZSTD/CMakeLists.txt |only src/fstlib/interface/fst_db.h | 2 src/fstlib/interface/fstdefines.h | 2 src/fstlib/interface/ifstcolumn.h | 2 src/fstlib/interface/istringwriter.h | 3 tests/testthat/data |only tests/testthat/test_lintr.R | 2 17 files changed, 604 insertions(+), 290 deletions(-)
More information about factset.protobuf.stachextensions at CRAN
Permanent link
Title: Analysing Chemodiversity of Phytochemical Data
Description: Quantify and visualise various measures of chemical diversity and
dissimilarity, for phytochemical compounds and other sets of chemical
composition data. Importantly, these measures can incorporate biosynthetic
and/or structural properties of the chemical compounds, resulting in a more
comprehensive quantification of diversity and dissimilarity. For details,
see Petrén, Köllner and Junker (2023) <doi:10.1111/nph.18685>.
Author: Hampus Petren [aut, cre] ,
Tobias G. Koellner [aut] ,
Robert R. Junker [aut]
Maintainer: Hampus Petren <hampus.petren@gmail.com>
Diff between chemodiv versions 0.1.3 dated 2022-08-26 and 0.2.0 dated 2023-01-12
DESCRIPTION | 10 +- MD5 | 38 +++++----- NEWS.md | 7 + R/calcDiv.R | 11 +- R/chemoDivPlot.R | 8 +- R/chemodiv.R | 6 - R/compDis.R | 61 ++++++++++++++-- R/molNet.R | 5 + R/sampDis.R | 2 README.md | 10 +- build/vignette.rds |binary inst/CITATION | 12 +-- inst/doc/chemodiv-vignette.Rmd | 26 ++++-- inst/doc/chemodiv-vignette.html | 149 ++++++++++++++++++---------------------- man/calcDiv.Rd | 11 +- man/chemodiv.Rd | 6 - man/compDis.Rd | 31 ++++++-- man/molNet.Rd | 5 + tests/testthat/test-compDis.R | 8 +- vignettes/chemodiv-vignette.Rmd | 26 ++++-- 20 files changed, 259 insertions(+), 173 deletions(-)
Title: Statistical Methods and Models for Claims Reserving in General
Insurance
Description: Various statistical methods and models which are
typically used for the estimation of outstanding claims reserves
in general insurance, including those to estimate the claims
development result as required under Solvency II.
Author: Markus Gesmann [aut, cre],
Daniel Murphy [aut],
Yanwei Zhang [aut],
Alessandro Carrato [aut],
Giuseppe Crupi [ctb],
Christophe Dutang [ctb],
Arnaud Lacoume [ctb],
Arthur Charpentier [ctb],
Mario Wuthrich [aut],
Fabio Concina [aut],
Eric Dal Moro [au [...truncated...]
Maintainer: Markus Gesmann <markus.gesmann@googlemail.com>
Diff between ChainLadder versions 0.2.16 dated 2022-08-23 and 0.2.17 dated 2023-01-12
DESCRIPTION | 8 MD5 | 18 - NEWS.md | 4 R/BootstrapReserve.R | 24 +- R/zzz.R | 2 build/vignette.rds |binary inst/doc/ChainLadder.html | 331 +++++++++++++++++---------------- inst/unitTests/runit.BootChainLadder.R | 8 man/BootChainLadder.Rd | 3 vignettes/ChainLadder.bib | 2 10 files changed, 216 insertions(+), 184 deletions(-)
Title: R Interface to the 'Yacas' Computer Algebra System
Description: Interface to the 'yacas' computer algebra system (<http://www.yacas.org/>).
Author: Mikkel Meyer Andersen [aut, cre, cph],
Rob Goedman [aut, cph],
Gabor Grothendieck [aut, cph],
Soeren Hoejsgaard [aut, cph],
Grzegorz Mazur [aut, cph],
Ayal Pinkus [aut, cph],
Nemanja Trifunovic [cph] )
Maintainer: Mikkel Meyer Andersen <mikl@math.aau.dk>
Diff between Ryacas versions 1.1.3.1 dated 2020-11-15 and 1.1.4 dated 2023-01-12
DESCRIPTION | 10 MD5 | 114 ++- NAMESPACE | 17 R/linalg.R |only R/y-fn.R | 46 + R/yac-cli.R | 2 build/vignette.rds |binary inst/NEWS | 6 inst/doc/arbitrary-precision.html | 331 ++++++----- inst/doc/getting-started.html | 501 ++++++++++------ inst/doc/high-level.html | 478 +++++++++------ inst/doc/latent-variable-model.html | 258 +++++--- inst/doc/low-level.html | 554 +++++++++++------- inst/doc/ssm-matrix.html | 335 ++++++----- inst/doc/yacas-rules.html | 189 +++--- inst/yacas/linalg.rep/code.ys | 88 +- inst/yacas/linalg.rep/code.ys.def | 2 inst/yacas/localrules.rep/code.ys | 6 inst/yacas/openmath.rep/code.ys | 55 + inst/yacas/orthopoly.rep/code.ys | 928 +++++++++++++++---------------- inst/yacas/plots.rep/backends-2d.ys | 2 inst/yacas/plots.rep/backends-3d.ys | 2 inst/yacas/plots.rep/plot3d.ys | 45 - inst/yacas/solve.rep/om.ys |only inst/yacas/stdarith.ys | 24 inst/yacas/yacasinit.ys | 51 + man/det.Rd |only man/lower.tri.Rd | 2 man/pipe.Rd | 2 man/pow.Rd |only man/tr.Rd |only man/upper.tri.Rd | 2 man/vec.Rd |only man/vech.Rd |only man/y_eval.Rd |only man/yac_cli.Rd | 2 src/RcppExports.cpp | 5 src/yacas/include/yacas/anumber.h | 6 src/yacas/include/yacas/anumber.inl | 4 src/yacas/include/yacas/mp/nn.hpp | 16 src/yacas/include/yacas/mp/zz.hpp | 4 src/yacas/include/yacas/numbers.h | 1 src/yacas/include/yacas/patterns.h | 6 src/yacas/include/yacas/platmath.h | 22 src/yacas/include/yacas/string_utils.h | 18 src/yacas/include/yacas/utf8.h | 4 src/yacas/include/yacas/utf8/checked.h | 43 - src/yacas/include/yacas/utf8/core.h | 26 src/yacas/include/yacas/utf8/cpp11.h |only src/yacas/include/yacas/utf8/unchecked.h | 71 +- src/yacas/include/yacas/yacas_version.h | 6 src/yacas/src/anumber.cpp | 391 ++++++------- src/yacas/src/lispatom.cpp | 14 src/yacas/src/mathcommands.cpp | 10 src/yacas/src/mathcommands3.cpp | 5 src/yacas/src/mempool.cpp | 2 src/yacas/src/nn.cpp | 65 -- src/yacas/src/platmath.cpp | 50 - src/yacas/src/tokenizer.cpp | 20 src/yacas/src/xmltokenizer.cpp | 19 src/yacas/src/yacasnumbers.cpp | 32 - tests/testthat/test-linalg.R |only tests/testthat/test-smoke.R | 21 63 files changed, 2852 insertions(+), 2061 deletions(-)
Title: Response Surface Analysis
Description: Advanced response surface analysis. The main function RSA computes
and compares several nested polynomial regression models (full second- or
third-order polynomial, shifted and rotated squared difference model,
rising ridge surfaces, basic squared difference model, asymmetric or
level-dependent congruence effect models). The package provides plotting
functions for 3d wireframe surfaces, interactive 3d plots, and contour plots.
Calculates many surface parameters (a1 to a5, principal axes, stationary point,
eigenvalues) and provides standard, robust, or bootstrapped standard errors
and confidence intervals for them.
Author: Felix Schoenbrodt [cre, aut],
Sarah Humberg [aut]
Maintainer: Felix Schoenbrodt <felix@nicebread.de>
Diff between RSA versions 0.10.4 dated 2021-03-23 and 0.10.6 dated 2023-01-12
DESCRIPTION | 10 MD5 | 16 NAMESPACE | 1 R/RSA.R | 18 R/imports.R | 2 R/plot.RSA.R | 2321 +++++++++++++++++++++++++++++---------------------------- inst/News.Rd | 20 man/RSA.Rd | 14 man/plotRSA.Rd | 22 9 files changed, 1277 insertions(+), 1147 deletions(-)
Title: RNA Secondary Structure Module Mining, Comparison and Plotting
Description: Provides function for RNA secondary structure plotting, comparison and module mining. Given a RNA secondary structure, you can obtain stem regions, hairpin loops, internal loops, bulge loops and multibranch loops of this RNA structure using this program. They are the basic modules of RNA secondary structure. For each module you get, you can use this program to label the RNA structure with a specific color. You can also use this program to compare two RNA secondary structures to get a score that represents similarity. Reference: Reuter JS, Mathews DH (2010) <doi:10.1186/1471-2105-11-129>.
Author: Zheng HeWei
Maintainer: Zheng HeWei<406649023@qq.com>
Diff between RNAsmc versions 0.7.0 dated 2021-12-14 and 0.8.0 dated 2023-01-12
DESCRIPTION | 8 ++-- MD5 | 4 +- R/RNAstrCluster.R | 93 +++++++++++++++++++++++++++++++++++++++++++++--------- 3 files changed, 85 insertions(+), 20 deletions(-)
Title: Wrapper for MUMPS Library
Description: Some basic features of 'MUMPS' (Multifrontal Massively Parallel
sparse direct Solver) are wrapped in a class whose methods can be used
for sequentially solving a sparse linear system (symmetric or not)
with one or many right hand sides (dense or sparse).
There is a possibility to do separately symbolic analysis,
LU (or LDL^t) factorization and system solving.
Third part ordering libraries are included and can be used: 'PORD', 'METIS', 'SCOTCH'.
'MUMPS' method was first described in Amestoy et al. (2001) <doi:10.1137/S0895479899358194>
and Amestoy et al. (2006) <doi:10.1016/j.parco.2005.07.004>.
Author: Serguei Sokol [aut, cre],
Emmanuel Agullo [ctb],
Patrick Amestoy [ctb, cph],
Maurice Bremond [ctb],
Alfredo Buttari [ctb],
Philippe Combes [ctb],
Marie Durand [ctb],
Aurelia Fevre [ctb],
Abdou Guermouche [ctb],
Guillaume Joslin [ctb],
Jacko Koster [c [...truncated...]
Maintainer: Serguei Sokol <sokol@insa-toulouse.fr>
Diff between rmumps versions 5.2.1-20 dated 2022-10-20 and 5.2.1-22 dated 2023-01-12
DESCRIPTION | 8 - MD5 | 24 +-- NEWS | 40 ++++-- R/RcppExports.R | 16 +- inst/include/rmumps.h | 3 man/rmumps-package.Rd | 2 src/lib/Makefile | 2 src/lib/metis-5.1.0/GKlib/gkregex.c | 123 ++++++++----------- src/lib/metis-5.1.0/Makefile | 1 src/lib/scotch_6.0.9/src/libscotch/arch.c | 8 - src/lib/scotch_6.0.9/src/libscotch/hgraph_order_st.c | 2 src/lib/scotch_6.0.9/src/libscotch/hmesh_order_st.c | 2 src/rmumps_module.cpp | 16 +- 13 files changed, 126 insertions(+), 121 deletions(-)
Title: Kriging Models using the 'libKriging' Library
Description: Interface to 'libKriging' 'C++' library <https://github.com/libKriging> that should
provide most standard Kriging / Gaussian process regression features
(like in 'DiceKriging', 'kergp' or 'RobustGaSP' packages).
'libKriging' relies on Armadillo linear algebra library (Apache 2 license) by Conrad Sanderson,
and 'lbfgsb_cpp' is a 'C++' wrapper by Colin Fang around 'lbfgsb' library (BSD-3 license) by
Ciyou Zhu, Richard Byrd, Jorge Nocedal and Jose Luis Morales used for hyperparameters optimization.
Author: Pascal Have [aut],
Yann Richet [aut, cre] ,
Yves Deville [aut],
Conrad Sanderson [ctb],
Colin Fang [ctb],
Ciyou Zhu [ctb],
Richard Byrd [ctb],
Jorge Nocedal [ctb],
Jose Luis Morales [ctb]
Maintainer: Yann Richet <yann.richet@irsn.fr>
Diff between rlibkriging versions 0.7-3 dated 2023-01-09 and 0.7-3.1 dated 2023-01-12
rlibkriging-0.7-3.1/rlibkriging/DESCRIPTION | 6 rlibkriging-0.7-3.1/rlibkriging/MD5 | 63 ++++------ rlibkriging-0.7-3.1/rlibkriging/src/libK/src/lib/CMakeLists.txt | 4 rlibkriging-0.7-3.1/rlibkriging/tests/test-KrigingCholCrash.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-KrigingFit.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-KrigingLeaveOneOut.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-KrigingLeaveOneOut_3d.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-KrigingLogLik.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-KrigingLogLikGradHess.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-KrigingLogMargPost.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-KrigingMethods.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-KrigingPredict.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-NoiseKrigingFit.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-NoiseKrigingLogLik.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-NoiseKrigingMethods.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-NoiseKrigingPredict.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-NuggetKrigingFit.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-NuggetKrigingLogLik.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-NuggetKrigingLogMargPost.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-NuggetKrigingMethods.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-NuggetKrigingPredict.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-RobustGaSP-Nugget.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-RobustGaSP.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-asDiceKriging.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-normalize.R |only rlibkriging-0.7-3.1/rlibkriging/tests/test-rlibkriging-demo.R |only rlibkriging-0.7-3.1/rlibkriging/tools/setup.sh | 15 ++ rlibkriging-0.7-3/rlibkriging/tests/testthat |only rlibkriging-0.7-3/rlibkriging/tests/testthat.R |only 29 files changed, 45 insertions(+), 43 deletions(-)
Title: Visualizations for 'mlr3'
Description: Visualization package of the 'mlr3' ecosystem. It features plots
for mlr3 objects such as task, learners, predictions, benchmark results,
tuning instances and filters via the 'autoplot()' generic of 'ggplot2'.
The package draws plots with the 'viridis' color palette and applies the
minimal theme. Visualizations include barplots, boxplots, histograms, ROC
curves, and Precision-Recall curves.
Author: Michel Lang [cre, aut] ,
Patrick Schratz [aut] ,
Raphael Sonabend [aut] ,
Marc Becker [aut] ,
Jakob Richter [aut] ,
Damir Pulatov [ctb]
Maintainer: Michel Lang <michellang@gmail.com>
Diff between mlr3viz versions 0.5.10 dated 2022-08-15 and 0.6.0 dated 2023-01-12
mlr3viz-0.5.10/mlr3viz/R/theme-mlr3.R |only mlr3viz-0.5.10/mlr3viz/man/figures/README-demo-3.png |only mlr3viz-0.5.10/mlr3viz/man/theme_mlr3.Rd |only mlr3viz-0.6.0/mlr3viz/DESCRIPTION | 24 mlr3viz-0.6.0/mlr3viz/MD5 | 257 mlr3viz-0.6.0/mlr3viz/NAMESPACE | 2 mlr3viz-0.6.0/mlr3viz/NEWS.md | 9 mlr3viz-0.6.0/mlr3viz/R/BenchmarkResult.R | 88 mlr3viz-0.6.0/mlr3viz/R/Filter.R | 34 mlr3viz-0.6.0/mlr3viz/R/LearnerClassifCVGlmnet.R | 9 mlr3viz-0.6.0/mlr3viz/R/LearnerClassifGlmnet.R | 33 mlr3viz-0.6.0/mlr3viz/R/LearnerClassifRpart.R | 44 mlr3viz-0.6.0/mlr3viz/R/LearnerClustHierarchical.R | 68 mlr3viz-0.6.0/mlr3viz/R/LearnerRegrCVGlmnet.R | 10 mlr3viz-0.6.0/mlr3viz/R/LearnerRegrGlmnet.R | 8 mlr3viz-0.6.0/mlr3viz/R/LearnerRegrRpart.R | 34 mlr3viz-0.6.0/mlr3viz/R/OptimInstanceSingleCrit.R | 211 mlr3viz-0.6.0/mlr3viz/R/PredictionClassif.R | 81 mlr3viz-0.6.0/mlr3viz/R/PredictionClust.R | 62 mlr3viz-0.6.0/mlr3viz/R/PredictionRegr.R | 93 mlr3viz-0.6.0/mlr3viz/R/ResampleResult.R | 209 mlr3viz-0.6.0/mlr3viz/R/TaskClassif.R | 76 mlr3viz-0.6.0/mlr3viz/R/TaskClust.R | 32 mlr3viz-0.6.0/mlr3viz/R/TaskRegr.R | 54 mlr3viz-0.6.0/mlr3viz/R/TuningInstanceSingleCrit.R | 58 mlr3viz-0.6.0/mlr3viz/R/as_precrec.R | 5 mlr3viz-0.6.0/mlr3viz/R/helper.R | 6 mlr3viz-0.6.0/mlr3viz/R/plot_learner_prediction.R | 30 mlr3viz-0.6.0/mlr3viz/R/zzz.R | 6 mlr3viz-0.6.0/mlr3viz/README.md | 52 mlr3viz-0.6.0/mlr3viz/build/partial.rdb |binary mlr3viz-0.6.0/mlr3viz/inst |only mlr3viz-0.6.0/mlr3viz/man/as_precrec.Rd | 3 mlr3viz-0.6.0/mlr3viz/man/autoplot.BenchmarkResult.Rd | 44 mlr3viz-0.6.0/mlr3viz/man/autoplot.Filter.Rd | 25 mlr3viz-0.6.0/mlr3viz/man/autoplot.LearnerClassifGlmnet.Rd | 34 mlr3viz-0.6.0/mlr3viz/man/autoplot.LearnerClassifRpart.Rd | 29 mlr3viz-0.6.0/mlr3viz/man/autoplot.LearnerClustHierarchical.Rd | 57 mlr3viz-0.6.0/mlr3viz/man/autoplot.OptimInstanceSingleCrit.Rd | 68 mlr3viz-0.6.0/mlr3viz/man/autoplot.PredictionClassif.Rd | 33 mlr3viz-0.6.0/mlr3viz/man/autoplot.PredictionClust.Rd | 45 mlr3viz-0.6.0/mlr3viz/man/autoplot.PredictionRegr.Rd | 44 mlr3viz-0.6.0/mlr3viz/man/autoplot.ResampleResult.Rd | 50 mlr3viz-0.6.0/mlr3viz/man/autoplot.TaskClassif.Rd | 31 mlr3viz-0.6.0/mlr3viz/man/autoplot.TaskClust.Rd | 27 mlr3viz-0.6.0/mlr3viz/man/autoplot.TaskRegr.Rd | 30 mlr3viz-0.6.0/mlr3viz/man/autoplot.TuningInstanceSingleCrit.Rd | 63 mlr3viz-0.6.0/mlr3viz/man/figures/README-demo-1.png |binary mlr3viz-0.6.0/mlr3viz/man/figures/README-demo-2.png |binary mlr3viz-0.6.0/mlr3viz/man/figures/logo.png |only mlr3viz-0.6.0/mlr3viz/man/mlr3viz-package.Rd | 4 mlr3viz-0.6.0/mlr3viz/man/plot_learner_prediction.Rd | 17 mlr3viz-0.6.0/mlr3viz/tests/testthat/_snaps/BenchmarkResult/bmr-boxplot.svg | 259 mlr3viz-0.6.0/mlr3viz/tests/testthat/_snaps/BenchmarkResult/bmr-holdout-roc.svg | 103 mlr3viz-0.6.0/mlr3viz/tests/testthat/_snaps/BenchmarkResult/bmr-prc.svg | 119 mlr3viz-0.6.0/mlr3viz/tests/testthat/_snaps/BenchmarkResult/bmr-roc.svg | 119 mlr3viz-0.6.0/mlr3viz/tests/testthat/_snaps/Filter/filter-1.svg | 72 mlr3viz-0.6.0/mlr3viz/tests/testthat/_snaps/Filter/filter-2.svg | 58 mlr3viz-0.6.0/mlr3viz/tests/testthat/_snaps/LearnerClassifCVGlmnet/learner-classif-cv-glmnet.svg | 806 - 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Title: Maps of Finland
Description: Maps and other related data of Finland.
Author: Jari Haukka [aut, cre]
Maintainer: Jari Haukka <jari.haukka@helsinki.fi>
Diff between mapsFinland versions 0.1.1 dated 2020-04-02 and 0.2.0 dated 2023-01-12
mapsFinland-0.1.1/mapsFinland/data/datalist |only mapsFinland-0.2.0/mapsFinland/DESCRIPTION | 11 +-- mapsFinland-0.2.0/mapsFinland/MD5 | 29 ++++----- mapsFinland-0.2.0/mapsFinland/NAMESPACE | 1 mapsFinland-0.2.0/mapsFinland/NEWS.md |only mapsFinland-0.2.0/mapsFinland/R/data.R | 31 +++++++++- mapsFinland-0.2.0/mapsFinland/man/Alueluokat_ja_kuntanumerot_2019.Rd | 8 +- mapsFinland-0.2.0/mapsFinland/man/SHP2019.Rd | 6 + mapsFinland-0.2.0/mapsFinland/man/erva2019.Rd | 6 + mapsFinland-0.2.0/mapsFinland/man/kunnat2019.Rd | 6 + mapsFinland-0.2.0/mapsFinland/man/maakunta2019.Rd | 6 + mapsFinland-0.2.0/mapsFinland/man/mkMapFinland.Rd |only mapsFinland-0.2.0/mapsFinland/man/seutukunnat2019.Rd | 6 + mapsFinland-0.2.0/mapsFinland/man/suuralue2019.Rd | 6 + mapsFinland-0.2.0/mapsFinland/man/taajama2019.Rd | 6 + mapsFinland-0.2.0/mapsFinland/man/tyossakayntialue2019.Rd | 6 + mapsFinland-0.2.0/mapsFinland/man/vaalipiiri2019.Rd | 10 +-- 17 files changed, 93 insertions(+), 45 deletions(-)
Title: Data Analysis for IP Addresses and Networks
Description: Classes and functions for working with IP (Internet Protocol)
addresses and networks, inspired by the Python 'ipaddress' module.
Offers full support for both IPv4 and IPv6 (Internet Protocol versions
4 and 6) address spaces. It is specifically designed to work well with
the 'tidyverse'.
Author: David Hall [aut, cre]
Maintainer: David Hall <david.hall.physics@gmail.com>
Diff between ipaddress versions 0.5.6 dated 2022-12-11 and 1.0.0 dated 2023-01-12
ipaddress-0.5.6/ipaddress/inst/doc/ipaddress-classes.R |only ipaddress-0.5.6/ipaddress/inst/doc/ipaddress-classes.Rmd |only ipaddress-0.5.6/ipaddress/inst/doc/ipaddress-classes.html |only ipaddress-0.5.6/ipaddress/inst/doc/ipaddress-examples.R |only ipaddress-0.5.6/ipaddress/inst/doc/ipaddress-examples.Rmd |only ipaddress-0.5.6/ipaddress/inst/doc/ipaddress-examples.html |only ipaddress-0.5.6/ipaddress/tests/testthat/test-pillar.txt |only ipaddress-0.5.6/ipaddress/vignettes/ipaddress-classes.Rmd |only ipaddress-0.5.6/ipaddress/vignettes/ipaddress-examples.Rmd |only ipaddress-1.0.0/ipaddress/DESCRIPTION | 23 - ipaddress-1.0.0/ipaddress/MD5 | 211 +++++----- ipaddress-1.0.0/ipaddress/NAMESPACE | 6 ipaddress-1.0.0/ipaddress/NEWS.md | 39 + ipaddress-1.0.0/ipaddress/R/address_ranges.R | 27 - ipaddress-1.0.0/ipaddress/R/check.R |only ipaddress-1.0.0/ipaddress/R/common_network.R | 8 ipaddress-1.0.0/ipaddress/R/country_networks.R |only ipaddress-1.0.0/ipaddress/R/data.R | 4 ipaddress-1.0.0/ipaddress/R/ip_address.R | 66 ++- ipaddress-1.0.0/ipaddress/R/ip_interface.R | 37 - ipaddress-1.0.0/ipaddress/R/ip_network.R | 50 -- ipaddress-1.0.0/ipaddress/R/ip_to_binary.R | 18 ipaddress-1.0.0/ipaddress/R/ip_to_bytes.R | 15 ipaddress-1.0.0/ipaddress/R/ip_to_hex.R | 28 - ipaddress-1.0.0/ipaddress/R/ip_to_hostname.R | 66 +-- ipaddress-1.0.0/ipaddress/R/ip_to_integer.R | 8 ipaddress-1.0.0/ipaddress/R/ip_version.R | 13 ipaddress-1.0.0/ipaddress/R/ipv6_transition.R | 39 - ipaddress-1.0.0/ipaddress/R/network_mask.R | 145 +++--- ipaddress-1.0.0/ipaddress/R/network_size.R | 21 ipaddress-1.0.0/ipaddress/R/operators.R | 8 ipaddress-1.0.0/ipaddress/R/pillar.R | 2 ipaddress-1.0.0/ipaddress/R/reserved.R | 43 -- ipaddress-1.0.0/ipaddress/R/reverse_pointer.R | 5 ipaddress-1.0.0/ipaddress/R/sample.R | 43 +- ipaddress-1.0.0/ipaddress/R/sequence.R | 12 ipaddress-1.0.0/ipaddress/R/test-helpers.R | 2 ipaddress-1.0.0/ipaddress/R/traverse_hierarchy.R | 57 +- ipaddress-1.0.0/ipaddress/R/within_network.R | 41 - ipaddress-1.0.0/ipaddress/README.md | 66 +-- ipaddress-1.0.0/ipaddress/build/vignette.rds |binary ipaddress-1.0.0/ipaddress/data/iana_ipv4.rda |binary ipaddress-1.0.0/ipaddress/inst/doc/ip-data.R |only ipaddress-1.0.0/ipaddress/inst/doc/ip-data.Rmd |only ipaddress-1.0.0/ipaddress/inst/doc/ip-data.html |only ipaddress-1.0.0/ipaddress/inst/doc/recipes.R |only ipaddress-1.0.0/ipaddress/inst/doc/recipes.Rmd |only ipaddress-1.0.0/ipaddress/inst/doc/recipes.html |only ipaddress-1.0.0/ipaddress/inst/include/ipaddress/encoding.h | 8 ipaddress-1.0.0/ipaddress/man/country_networks.Rd |only ipaddress-1.0.0/ipaddress/man/iana_ipv4.Rd | 4 ipaddress-1.0.0/ipaddress/man/ip_address.Rd | 40 - ipaddress-1.0.0/ipaddress/man/ip_cast.Rd |only ipaddress-1.0.0/ipaddress/man/ip_format.Rd |only ipaddress-1.0.0/ipaddress/man/ip_interface.Rd | 38 - ipaddress-1.0.0/ipaddress/man/ip_network.Rd | 43 -- ipaddress-1.0.0/ipaddress/man/ip_test.Rd |only ipaddress-1.0.0/ipaddress/man/ip_to_binary.Rd | 8 ipaddress-1.0.0/ipaddress/man/ip_to_bytes.Rd | 8 ipaddress-1.0.0/ipaddress/man/ip_to_hex.Rd | 8 ipaddress-1.0.0/ipaddress/man/ip_to_hostname.Rd | 33 - ipaddress-1.0.0/ipaddress/man/ip_to_integer.Rd | 8 ipaddress-1.0.0/ipaddress/man/ipaddress-package.Rd | 2 ipaddress-1.0.0/ipaddress/man/ipv6-transition.Rd | 4 ipaddress-1.0.0/ipaddress/man/netmask.Rd | 63 +- ipaddress-1.0.0/ipaddress/man/network_size.Rd | 6 ipaddress-1.0.0/ipaddress/man/sample.Rd | 10 ipaddress-1.0.0/ipaddress/man/sequence.Rd | 2 ipaddress-1.0.0/ipaddress/man/traverse_hierarchy.Rd | 10 ipaddress-1.0.0/ipaddress/src/address_ranges.cpp | 10 ipaddress-1.0.0/ipaddress/src/ip_address.cpp | 6 ipaddress-1.0.0/ipaddress/src/ip_network.cpp | 6 ipaddress-1.0.0/ipaddress/src/ip_to_binary.cpp | 4 ipaddress-1.0.0/ipaddress/src/ip_to_bytes.cpp | 4 ipaddress-1.0.0/ipaddress/src/ip_to_hex.cpp | 4 ipaddress-1.0.0/ipaddress/src/ip_to_hostname.cpp | 4 ipaddress-1.0.0/ipaddress/src/masking.cpp | 6 ipaddress-1.0.0/ipaddress/src/networks.cpp | 8 ipaddress-1.0.0/ipaddress/src/operators.cpp | 14 ipaddress-1.0.0/ipaddress/src/reserved.cpp | 6 ipaddress-1.0.0/ipaddress/src/reverse_pointer.cpp | 2 ipaddress-1.0.0/ipaddress/src/sequence.cpp | 32 + ipaddress-1.0.0/ipaddress/tests/testthat/_snaps |only ipaddress-1.0.0/ipaddress/tests/testthat/test-address_ranges.R | 79 +-- ipaddress-1.0.0/ipaddress/tests/testthat/test-common_network.R | 17 ipaddress-1.0.0/ipaddress/tests/testthat/test-country_networks.R |only ipaddress-1.0.0/ipaddress/tests/testthat/test-ip_interface.R | 4 ipaddress-1.0.0/ipaddress/tests/testthat/test-ip_network_v4.R | 16 ipaddress-1.0.0/ipaddress/tests/testthat/test-ip_network_v6.R | 10 ipaddress-1.0.0/ipaddress/tests/testthat/test-ip_to_binary.R | 8 ipaddress-1.0.0/ipaddress/tests/testthat/test-ip_to_bytes.R | 12 ipaddress-1.0.0/ipaddress/tests/testthat/test-ip_to_hex.R | 28 - ipaddress-1.0.0/ipaddress/tests/testthat/test-ip_to_hostname.R | 54 +- ipaddress-1.0.0/ipaddress/tests/testthat/test-ip_to_integer.R | 21 ipaddress-1.0.0/ipaddress/tests/testthat/test-ip_version.R | 12 ipaddress-1.0.0/ipaddress/tests/testthat/test-ipv6_transition.R | 44 +- ipaddress-1.0.0/ipaddress/tests/testthat/test-network_mask.R | 56 +- ipaddress-1.0.0/ipaddress/tests/testthat/test-network_size.R | 12 ipaddress-1.0.0/ipaddress/tests/testthat/test-operators.R | 8 ipaddress-1.0.0/ipaddress/tests/testthat/test-pillar.R | 26 - ipaddress-1.0.0/ipaddress/tests/testthat/test-reserved.R | 32 + ipaddress-1.0.0/ipaddress/tests/testthat/test-reverse_pointer.R | 4 ipaddress-1.0.0/ipaddress/tests/testthat/test-sample.R | 33 - ipaddress-1.0.0/ipaddress/tests/testthat/test-sequence.R | 15 ipaddress-1.0.0/ipaddress/tests/testthat/test-traverse_hierarchy.R | 89 ++-- ipaddress-1.0.0/ipaddress/tests/testthat/test-within_network.R | 30 - ipaddress-1.0.0/ipaddress/vignettes/ip-data.Rmd |only ipaddress-1.0.0/ipaddress/vignettes/recipes.Rmd |only 108 files changed, 1043 insertions(+), 1071 deletions(-)