Title: Tools to Accompany the 'psych' Package for Psychological
Research
Description: Support functions, data sets, and vignettes for the 'psych' package. Contains several of the biggest data sets for the 'psych' package as well as four vignettes. A few helper functions for file manipulation are included as well. For more information, see the <https://personality-project.org/r/> web page.
Author: William Revelle [aut, cre]
Maintainer: William Revelle <revelle@northwestern.edu>
Diff between psychTools versions 2.3.3 dated 2023-03-17 and 2.3.6 dated 2023-06-17
DESCRIPTION | 10 +- MD5 | 50 +++++++------ NAMESPACE | 86 +++-------------------- R/recode.r |only R/selectBy.R |only R/utlilites.r | 4 - R/vJoin.R |only inst/CITATION | 2 inst/NEWS.Rd | 17 +++- inst/doc/factor.R | 2 inst/doc/factor.Rnw | 42 +++++------ inst/doc/factor.pdf |binary inst/doc/mediation.R | 119 +++++++++++++++++++++----------- inst/doc/mediation.pdf |binary inst/doc/mediation.rnw | 163 ++++++++++++++++++++++++++++++--------------- inst/doc/omega.Rnw | 14 +-- inst/doc/omega.pdf |binary inst/doc/overview.R | 4 - inst/doc/overview.Rnw | 40 +++++------ inst/doc/overview.pdf |binary man/globalWarm.Rd | 30 +++++--- man/holzinger.swineford.Rd | 11 +-- man/recode.Rd |only man/selectBy.Rd |only man/vJoin.Rd |only vignettes/factor.Rnw | 42 +++++------ vignettes/mediation.rnw | 163 ++++++++++++++++++++++++++++++--------------- vignettes/omega.Rnw | 14 +-- vignettes/overview.Rnw | 40 +++++------ 29 files changed, 481 insertions(+), 372 deletions(-)
Title: Rcpp Integration for CGAL
Description: Creates a header only package to link to the CGAL
(Computational Geometry Algorithms Library)
header files in Rcpp. There are a variety of potential uses for
the software such as Hilbert sorting, KDtree nearest neighbors,
and convex hull algorithms. For more information about how to use the header files,
see the CGAL documentation at <https://www.cgal.org>. Currently
downloads the latest stable CGAL release from GitHub.
Author: Eric Dunipace [aut, cre]
Maintainer: Eric Dunipace <edunipace@mail.harvard.edu>
Diff between RcppCGAL versions 5.5.2 dated 2023-05-29 and 5.5.3 dated 2023-06-17
DESCRIPTION | 14 ++++------- MD5 | 20 ++++++++-------- R/cgal_check.R | 56 +++++++++++++++++++++++++++++++++++++++++++-- R/cgal_version.R | 38 +++++++++++++++++++++--------- R/cleaner.R | 2 - R/downloader.R | 51 +++++++++++++++++++++++++++++++++++++--- R/zzz.R | 15 +++++++----- README.md | 10 ++++---- inst/NEWS.md | 24 ++++++++++++------- inst/doc/Installation.html | 42 ++++++++++++++++----------------- man/RcppCGAL-package.Rd | 2 - 11 files changed, 197 insertions(+), 77 deletions(-)
Title: Uniform Sampling
Description: Uniform sampling on various geometric shapes, such as
spheres, ellipsoids, simplices.
Author: Stephane Laurent
Maintainer: Stephane Laurent <laurent_step@outlook.fr>
Diff between uniformly versions 0.3.0 dated 2023-05-19 and 0.4.0 dated 2023-06-17
DESCRIPTION | 8 MD5 | 78 NAMESPACE | 83 NEWS.md | 42 R/ellipsoid.R | 234 R/internal.R |only build/vignette.rds |binary inst/doc/convexhull.R | 224 inst/doc/convexhull.Rmd | 390 inst/doc/convexhull.html |18652 +++++++++++++++++++++---------------------- inst/keep |only man/rphong_on_hemisphere.Rd | 60 man/runif_cube.Rd | 68 man/runif_ellipsoid.Rd | 144 man/runif_in_annulus.Rd | 54 man/runif_in_pball.Rd | 54 man/runif_in_polygon.Rd | 90 man/runif_in_simplex.Rd | 58 man/runif_in_tetrahedron.Rd | 62 man/runif_on_spherePatch.Rd | 82 man/runif_on_sphericalCap.Rd | 56 man/runif_on_stri.Rd | 58 man/runif_sphere.Rd | 64 man/runif_torus.Rd | 80 man/runif_triangle.Rd | 58 man/runif_unitSimplex.Rd | 66 man/surface_sphere.Rd | 54 man/surface_spherePatch.Rd | 70 man/surface_sphericalCap.Rd | 38 man/surface_stri.Rd | 48 man/surface_torus.Rd | 38 man/surface_triangle.Rd | 42 man/volume_ellipsoid.Rd | 62 man/volume_pball.Rd | 50 man/volume_simplex.Rd | 48 man/volume_sphere.Rd | 50 man/volume_sphericalCap.Rd | 38 man/volume_tetrahedron.Rd | 52 man/volume_torus.Rd | 38 man/volume_unitSimplex.Rd | 40 vignettes/convexhull.Rmd | 390 41 files changed, 10954 insertions(+), 10869 deletions(-)
Title: Prediction Model Pooling, Selection and Performance Evaluation
Across Multiply Imputed Datasets
Description: Pooling, backward and forward selection of linear, logistic and Cox regression models in
multiply imputed datasets. Backward and forward selection can be done
from the pooled model using Rubin's Rules (RR), the D1, D2, D3, D4 and
the median p-values method. This is also possible for Mixed models.
The models can contain continuous, dichotomous, categorical and restricted
cubic spline predictors and interaction terms between all these type of predictors.
The stability of the models can be evaluated using (cluster) bootstrapping. The package
further contains functions to pool model performance measures as ROC/AUC, Reclassification,
R-squared, scaled Brier score, H&L test and calibration plots for logistic regression models.
Internal validation can be done across multiply imputed datasets with cross-validation or
bootstrapping. The adjusted intercept after shrinkage of pooled regression coefficients
can be obtained. Backward and forward selection as part of internal validation is possi [...truncated...]
Author: Martijn Heymans [cre, aut] ,
Iris Eekhout [ctb]
Maintainer: Martijn Heymans <mw.heymans@amsterdamumc.nl>
Diff between psfmi versions 1.3.0 dated 2023-06-16 and 1.4.0 dated 2023-06-17
DESCRIPTION | 6 ++-- MD5 | 26 ++++++++++---------- NEWS.md | 5 +++ R/psfmi_coxr_bw.R | 1 R/psfmi_coxr_fw.R | 3 +- inst/doc/Pool_Model_Performance.html | 4 +-- inst/doc/Pooling_AUC_values.html | 4 +-- inst/doc/psfmi_CoxModels.html | 12 ++++----- inst/doc/psfmi_LinearModels.html | 4 +-- inst/doc/psfmi_LogisticModels.html | 4 +-- inst/doc/psfmi_mice.html | 44 +++++++++++++++++------------------ man/psfmi_coxr_bw.Rd | 2 + man/psfmi_coxr_fw.Rd | 2 + tests/testthat/testthat.R | 24 +++++++++---------- 14 files changed, 76 insertions(+), 65 deletions(-)
Title: Machine Learning in R - Next Generation
Description: Efficient, object-oriented programming on the
building blocks of machine learning. Provides 'R6' objects for tasks,
learners, resamplings, and measures. The package is geared towards
scalability and larger datasets by supporting parallelization and
out-of-memory data-backends like databases. While 'mlr3' focuses on
the core computational operations, add-on packages provide additional
functionality.
Author: Michel Lang [cre, aut] ,
Bernd Bischl [aut] ,
Jakob Richter [aut] ,
Patrick Schratz [aut] ,
Giuseppe Casalicchio [ctb] ,
Stefan Coors [ctb] ,
Quay Au [ctb] ,
Martin Binder [aut],
Florian Pfisterer [aut] ,
Raphael Sonabend [aut] ,
Lennart Schneider [c [...truncated...]
Maintainer: Michel Lang <michellang@gmail.com>
Diff between mlr3 versions 0.16.0 dated 2023-05-05 and 0.16.1 dated 2023-06-17
DESCRIPTION | 8 +- MD5 | 48 ++++++++--------- NAMESPACE | 1 NEWS.md | 9 +++ R/BenchmarkResult.R | 2 R/Learner.R | 2 R/TaskClassif_german_credit.R | 2 R/TaskClassif_spam.R | 2 R/TaskClassif_wine.R | 2 R/benchmark_grid.R | 6 ++ R/bibentries.R | 2 R/helper_exec.R | 2 R/mlr_test_helpers.R | 4 - R/reexports.R | 3 + man/BenchmarkResult.Rd | 2 man/Learner.Rd | 2 man/benchmark.Rd | 1 man/benchmark_grid.Rd | 6 ++ man/mlr_tasks_german_credit.Rd | 2 man/mlr_tasks_spam.Rd | 4 - man/mlr_tasks_wine.Rd | 4 - man/mlr_test_helpers.Rd | 4 - man/reexports.Rd | 3 - man/resample.Rd | 1 tests/testthat/test_mlr_learners_classif_featureless.R | 2 25 files changed, 76 insertions(+), 48 deletions(-)
Title: Smoother Change Tracking and Versioning for R Packages
Description: Streamlines the process of updating changelogs (NEWS.md)
and versioning R packages developed in git repositories.
Author: Kirill Mueller [aut, cre, cph] ,
Patrick Schratz [aut] ,
Maelle Salmon [ctb]
Maintainer: Kirill Mueller <kirill@cynkra.com>
Diff between fledge versions 0.1.0 dated 2021-12-07 and 0.1.1 dated 2023-06-17
DESCRIPTION | 14 MD5 | 18 NEWS.md | 4 R/repo-helper.R | 8 README.md | 38 - build/vignette.rds |binary inst/doc/demo.html | 1115 ++++++++++++++++++++++++++++---------------- inst/doc/fledge.html | 540 ++++++++++++++++----- inst/doc/internals.html | 367 +++++++++++--- man/rmd-fragments/pitch.Rmd | 2 10 files changed, 1471 insertions(+), 635 deletions(-)
Title: Patient-Reported Outcome Data Analysis with Stan
Description: Algorithms and subroutines for patient-reported outcome data analysis.
Author: Bin Wang [aut, cre]
Maintainer: Bin Wang <bwang831@gmail.com>
Diff between prome versions 1.5.6.70 dated 2022-05-06 and 1.8.1.0 dated 2023-06-17
DESCRIPTION | 6 +++--- MD5 | 8 ++++++-- NAMESPACE | 5 ++++- R/crossover2x2.R |only inst/stan/cross.stan |only inst/stan/cross1.stan |only man/xover.Rd |only 7 files changed, 13 insertions(+), 6 deletions(-)
Title: Haplotype-Aware CNV Analysis from scRNA-Seq
Description: A computational method that infers copy number variations (CNVs) in cancer scRNA-seq data and reconstructs the tumor phylogeny. 'numbat' integrates signals from gene expression, allelic ratio, and population haplotype structures to accurately infer allele-specific CNVs in single cells and reconstruct their lineage relationship. 'numbat' can be used to: 1. detect allele-specific copy number variations from single-cells; 2. differentiate tumor versus normal cells in the tumor microenvironment; 3. infer the clonal architecture and evolutionary history of profiled tumors. 'numbat' does not require tumor/normal-paired DNA or genotype data, but operates solely on the donor scRNA-data data (for example, 10x Cell Ranger output). Additional examples and documentations are available at <https://kharchenkolab.github.io/numbat/>. For details on the method please see Gao et al. Nature Biotechnology (2022) <doi:10.1038/s41587-022-01468-y>.
Author: Teng Gao [cre, aut],
Ruslan Soldatov [aut],
Hirak Sarkar [aut],
Evan Biederstedt [aut],
Peter Kharchenko [aut]
Maintainer: Teng Gao <tgao@g.harvard.edu>
Diff between numbat versions 1.3.2 dated 2023-06-06 and 1.3.2-1 dated 2023-06-17
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- R/main.R | 3 ++- src/Makevars | 2 +- src/Makevars.win | 2 +- 5 files changed, 11 insertions(+), 10 deletions(-)
Title: Tools for Graph Matching
Description: Versatile tools and data for graph matching analysis with various forms of prior information
that supports working with 'igraph' objects, matrix objects, or lists of either.
Author: Daniel Sussman [aut, cre],
Zihuan Qiao [aut],
Joshua Agterberg [ctb],
Lujia Wang [ctb],
Vince Lyzinski [ctb]
Maintainer: Daniel Sussman <sussman@bu.edu>
Diff between iGraphMatch versions 2.0.1 dated 2022-09-13 and 2.0.2 dated 2023-06-17
DESCRIPTION | 17 - MD5 | 16 - NEWS.md | 4 R/matrix_list.R | 6 R/splr_matrix_class.R | 10 README.md | 8 build/vignette.rds |binary inst/doc/iGraphMatch.html | 502 ++++++++++++++++++++++----------------------- man/iGraphMatch-package.Rd | 3 9 files changed, 291 insertions(+), 275 deletions(-)
Title: R and C++ Interfaces to 'spdlog' C++ Header Library for Logging
Description: The mature and widely-used C++ logging library 'spdlog' by Gabi Melman provides
many desirable features. This package bundles these header files for easy use by R packages
from both their R and C or C++ code. Explicit use via 'LinkingTo:' is also supported. Also
see the 'spdl' package which enhanced this package with a consistent R and C++ interface.
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppSpdlog versions 0.0.12 dated 2023-01-07 and 0.0.13 dated 2023-06-17
ChangeLog | 26 ++++++++++++++++++++++++ DESCRIPTION | 8 +++---- MD5 | 27 +++++++++++++------------ R/RcppExports.R | 9 ++++++-- build/partial.rdb |binary build/vignette.rds |binary inst/NEWS.Rd | 12 +++++++++++ inst/include/RcppSpdlog_RcppExports.h | 20 ++++++++++++++++++ inst/include/RcppSpdlog_types.h | 6 ++++- inst/include/spdl.h | 2 + inst/include/spdlog_stopwatch.h |only man/log_setup.Rd | 5 +++- src/Makevars | 2 - src/RcppExports.cpp | 36 ++++++++++++++++++++++++++++++++++ src/interface.cpp | 8 ++++++- 15 files changed, 137 insertions(+), 24 deletions(-)
Title: Plane Geometry
Description: An extensive set of plane geometry routines. Provides R6
classes representing triangles, circles, circular arcs, ellipses,
elliptical arcs and lines, and their plot methods. Also provides R6
classes representing transformations: rotations, reflections,
homotheties, scalings, general affine transformations, inversions,
Möbius transformations.
Author: Stephane Laurent
Maintainer: Stephane Laurent <laurent_step@outlook.fr>
Diff between PlaneGeometry versions 1.4.0 dated 2023-05-19 and 1.5.0 dated 2023-06-17
DESCRIPTION | 6 MD5 | 174 - NAMESPACE | 170 - NEWS.md | 175 - R/Affine.R | 552 ++--- R/Arc.R | 506 ++--- R/AxisScaling.R | 358 +-- R/Circle.R | 1436 +++++++------- R/Ellipse.R | 1898 +++++++++---------- R/EllipticalArc.R | 522 ++--- R/Homothety.R | 272 +- R/Projection.R | 286 +- R/Reflection.R | 240 +- R/Rotation.R | 470 ++-- R/Scaling.R | 434 ++-- R/Shear.R | 530 ++--- R/Translation.R | 268 +- R/Triangle.R | 18 R/draw.R | 260 +- R/imports.R | 4 R/internal.R | 29 build/vignette.rds |binary inst/doc/examples.R | 2403 ++++++++++++------------ inst/doc/examples.Rmd | 2960 +++++++++++++++--------------- inst/doc/examples.html | 3317 +++++++++++++++++----------------- man/Affine.Rd | 418 ++-- man/AffineMappingEllipse2Ellipse.Rd | 48 man/AffineMappingThreePoints.Rd | 40 man/Arc.Rd | 462 ++-- man/Circle.Rd | 1262 ++++++------ man/CircleAB.Rd | 34 man/CircleOA.Rd | 40 man/Ellipse.Rd | 1420 +++++++------- man/EllipseEquationFromFivePoints.Rd | 62 man/EllipseFromCenterAndMatrix.Rd | 50 man/EllipseFromEquation.Rd | 56 man/EllipseFromFivePoints.Rd | 48 man/EllipseFromFociAndOnePoint.Rd | 38 man/EllipseFromThreeBoundaryPoints.Rd | 46 man/EllipticalArc.Rd | 446 ++-- man/GaussianEllipse.Rd | 46 man/Homothety.Rd | 364 +-- man/Inversion.Rd | 672 +++--- man/Line.Rd | 894 ++++----- man/LownerJohnEllipse.Rd | 54 man/Mobius.Rd | 670 +++--- man/MobiusMappingCircle.Rd | 52 man/MobiusMappingThreePoints.Rd | 40 man/MobiusSwappingTwoPoints.Rd | 36 man/Projection.Rd | 432 ++-- man/Reflection.Rd | 522 ++--- man/Rotation.Rd | 618 +++--- man/Scaling.Rd | 406 ++-- man/ScalingXY.Rd | 340 +-- man/Shear.Rd | 406 ++-- man/SteinerChain.Rd | 74 man/Translation.Rd | 450 ++-- man/Triangle.Rd | 2530 +++++++++++++------------ man/TriangleThreeLines.Rd | 34 man/crossRatio.Rd | 64 man/draw.Rd | 126 - man/fitEllipse.Rd | 66 man/intersectionCircleCircle.Rd | 42 man/intersectionCircleLine.Rd | 66 man/intersectionEllipseLine.Rd | 66 man/intersectionLineLine.Rd | 46 man/inversionFixingThreeCircles.Rd | 36 man/inversionFixingTwoCircles.Rd | 36 man/inversionFromCircle.Rd | 34 man/inversionKeepingCircle.Rd | 50 man/inversionSwappingTwoCircles.Rd | 46 man/maxAreaInscribedCircle.Rd | 94 man/maxAreaInscribedEllipse.Rd | 92 man/midCircles.Rd | 66 man/radicalCenter.Rd | 34 man/soddyCircle.Rd | 34 man/unitCircle.Rd | 32 tests/testthat.R | 8 tests/testthat/test-affine.R | 56 tests/testthat/test-ellipticalArc.R | 76 tests/testthat/test-intersections.R | 436 ++-- tests/testthat/test-inversions.R | 258 +- tests/testthat/test-midcircles.R | 148 - tests/testthat/test-mobius.R | 164 - tests/testthat/test-rotation.R | 52 tests/testthat/test-scaling.R | 22 tests/testthat/test-shear.R | 20 vignettes/examples.Rmd | 2960 +++++++++++++++--------------- 88 files changed, 18120 insertions(+), 17508 deletions(-)
Title: Tipping Point Analysis for Bayesian Dynamic Borrowing
Description: Tipping point analysis for clinical trials that employ Bayesian dynamic borrowing via robust meta-analytic predictive (MAP) priors. Mainly an implementation of an approach proposed by Best and colleagues (2021) is provided <doi:10.1002/pst.2093>. Further functions facilitate the specification of the robust MAP prior via expert elicitation (using the roulette method). Intended use is the planning, analysis and interpretation of extrapolation studies in pediatric drug development, but applicability is generally wider.
Author: Morten Dreher [aut],
Christian Stock [aut, cre] ,
Emma Torrini [ctb],
Boehringer Ingelheim Pharma GmbH & Co. KG [cph, fnd]
Maintainer: Christian Stock <christian.stock@boehringer-ingelheim.com>
Diff between tipmap versions 0.4.1 dated 2023-04-24 and 0.4.2 dated 2023-06-17
tipmap-0.4.1/tipmap/R/get_stochast_weight_posterior.R |only tipmap-0.4.1/tipmap/man/get_stochast_weight_posterior.Rd |only tipmap-0.4.2/tipmap/DESCRIPTION | 41 tipmap-0.4.2/tipmap/MD5 | 74 tipmap-0.4.2/tipmap/NEWS.md | 67 tipmap-0.4.2/tipmap/R/get_tipping_points.R | 2 tipmap-0.4.2/tipmap/R/tipmap_plot.R | 70 tipmap-0.4.2/tipmap/README.md | 272 tipmap-0.4.2/tipmap/build/vignette.rds |binary tipmap-0.4.2/tipmap/inst/doc/expert_elicitation.R | 265 tipmap-0.4.2/tipmap/inst/doc/expert_elicitation.Rmd | 445 - tipmap-0.4.2/tipmap/inst/doc/expert_elicitation.html | 3700 ++++++------- tipmap-0.4.2/tipmap/inst/doc/introduction.R | 380 - tipmap-0.4.2/tipmap/inst/doc/introduction.Rmd | 682 +- tipmap-0.4.2/tipmap/inst/doc/introduction.html | 4103 +++++++-------- tipmap-0.4.2/tipmap/man/create_new_trial_data.Rd | 60 tipmap-0.4.2/tipmap/man/create_posterior_data.Rd | 108 tipmap-0.4.2/tipmap/man/create_prior_data.Rd | 66 tipmap-0.4.2/tipmap/man/create_tipmap_data.Rd | 92 tipmap-0.4.2/tipmap/man/default_quantiles.Rd | 32 tipmap-0.4.2/tipmap/man/default_weights.Rd | 32 tipmap-0.4.2/tipmap/man/draw_beta_mixture_1sample.Rd | 62 tipmap-0.4.2/tipmap/man/draw_beta_mixture_nsamples.Rd | 68 tipmap-0.4.2/tipmap/man/fit_beta_1exp.Rd | 54 tipmap-0.4.2/tipmap/man/fit_beta_mult_exp.Rd | 60 tipmap-0.4.2/tipmap/man/get_cum_probs_1exp.Rd | 50 tipmap-0.4.2/tipmap/man/get_model_input_1exp.Rd | 54 tipmap-0.4.2/tipmap/man/get_posterior_by_weight.Rd | 58 tipmap-0.4.2/tipmap/man/get_summary_mult_exp.Rd | 58 tipmap-0.4.2/tipmap/man/get_tipping_points.Rd | 60 tipmap-0.4.2/tipmap/man/load_tipmap_data.Rd | 48 tipmap-0.4.2/tipmap/man/tipmap_darkblue.Rd | 32 tipmap-0.4.2/tipmap/man/tipmap_lightred.Rd | 32 tipmap-0.4.2/tipmap/man/tipmap_plot.Rd | 116 tipmap-0.4.2/tipmap/tests/testthat.R | 24 tipmap-0.4.2/tipmap/vignettes/expert_elicitation.Rmd | 445 - tipmap-0.4.2/tipmap/vignettes/introduction.Rmd | 682 +- tipmap-0.4.2/tipmap/vignettes/jrss_style.csl | 610 +- tipmap-0.4.2/tipmap/vignettes/references.bib | 395 - 39 files changed, 6702 insertions(+), 6697 deletions(-)
Title: Translate Text
Description: The goal of the this package is to provide easy methods to
translate pieces of text. Functions send requests to translation services online.
Author: Tomer Iwan [aut, cre, cph]
Maintainer: Tomer Iwan <t.iwan@vu.nl>
Diff between polyglotr versions 1.0.2 dated 2023-01-26 and 1.1.0 dated 2023-06-17
DESCRIPTION | 13 ++++++----- MD5 | 30 ++++++++++++++++---------- NAMESPACE | 2 + NEWS.md | 10 ++------ R/google_translate.R | 4 +++ R/google_translate_file.R |only R/language_detect.R |only README.md | 10 ++++++++ build/vignette.rds |binary inst/doc/Movie_Reviews.R |only inst/doc/Movie_Reviews.Rmd |only inst/doc/Movie_Reviews.html |only inst/doc/polyglotr.R | 18 +++++++++++++++ inst/doc/polyglotr.Rmd | 40 +++++++++++++++++++++++++++++++++++ inst/doc/polyglotr.html | 50 +++++++++++++++++++++++++++++++++++++++++++- man/language_detect.Rd |only man/translate_file.Rd |only tests/testthat.R | 4 --- vignettes/Movie_Reviews.Rmd |only vignettes/polyglotr.Rmd | 40 +++++++++++++++++++++++++++++++++++ 20 files changed, 193 insertions(+), 28 deletions(-)
Title: Sensitivity Analysis of Neural Networks
Description: Analysis functions to quantify inputs importance in neural network models.
Functions are available for calculating and plotting the inputs importance and obtaining
the activation function of each neuron layer and its derivatives. The importance of a given
input is defined as the distribution of the derivatives of the output with respect to that
input in each training data point <doi:10.18637/jss.v102.i07>.
Author: Jose Portela Gonzalez [aut],
Antonio Munoz San Roque [aut],
Jaime Pizarroso Gonzalo [aut, ctb, cre]
Maintainer: Jaime Pizarroso Gonzalo <jpizarroso@comillas.edu>
Diff between NeuralSens versions 1.0.2 dated 2023-03-07 and 1.0.3 dated 2023-06-17
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- R/AlphaSensCurve.R | 25 +++++++++++++++++++------ R/SensitivityPlots.R | 37 +++++++++++++++++++++++++++++++++---- man/AlphaSensAnalysis.Rd | 12 ++++++++++-- man/SensitivityPlots.Rd | 12 +++++++++++- 6 files changed, 82 insertions(+), 22 deletions(-)
Title: Time Domain Signal Coding
Description: Functions for performing time domain signal coding as used in Chesmore (2001) <doi:10.1016/S0003-682X(01)00009-3>, and related tasks. This package creates the standard S-matrix and A-matrix (with variable lag), has tools to convert coding matrices into distributed matrices, provides published codebooks and allows for extraction of code sequences.
Author: Ed Baker [aut, cre]
Maintainer: Ed Baker <ed@ebaker.me.uk>
Diff between tdsc versions 1.0.3 dated 2019-12-19 and 1.0.4 dated 2023-06-17
tdsc-1.0.3/tdsc/R/tdsc.w.R |only tdsc-1.0.3/tdsc/man/tdsc.plot.Rd |only tdsc-1.0.3/tdsc/man/tdsc.w.Rd |only tdsc-1.0.4/tdsc/DESCRIPTION | 8 ++-- tdsc-1.0.4/tdsc/MD5 | 32 +++++++--------- tdsc-1.0.4/tdsc/NAMESPACE | 3 - tdsc-1.0.4/tdsc/NEWS.md | 3 + tdsc-1.0.4/tdsc/R/emptyBands.R | 8 ++-- tdsc-1.0.4/tdsc/R/plot.R | 14 +++---- tdsc-1.0.4/tdsc/R/tdsc-class.R | 7 ++- tdsc-1.0.4/tdsc/R/tdsc.R | 66 ++++++++++++++++++--------------- tdsc-1.0.4/tdsc/man/chesmore2001.Rd | 4 +- tdsc-1.0.4/tdsc/man/farr2007.Rd | 4 +- tdsc-1.0.4/tdsc/man/followingCodes.Rd | 11 ++++- tdsc-1.0.4/tdsc/man/sample_waveform.Rd | 12 ++++-- tdsc-1.0.4/tdsc/man/tdsc-class.Rd | 2 + tdsc-1.0.4/tdsc/man/tdsc.Rd | 3 - tdsc-1.0.4/tdsc/man/tdsc_plot.Rd |only tdsc-1.0.4/tdsc/tests/testthat.R | 1 19 files changed, 102 insertions(+), 76 deletions(-)
Title: Efficient and Accessible Discrete Choice Experiments
Description: Design, conduct and analyze 'DCEs' from a virtual interface in shiny. Reference: Perez-Troncoso, D. (2022) <https://github.com/danielpereztr/DCEtool>.
Author: Daniel Perez Troncoso [aut, cre]
Maintainer: Daniel Perez Troncoso <danielperez@ugr.es>
Diff between DCEtool versions 1.0.0 dated 2022-04-14 and 1.1.0 dated 2023-06-17
DESCRIPTION | 15 - MD5 | 12 - R/app.R | 78 ++++++- R/dce_toolbox.R | 525 ++++++++++++++++++++++++++++++-------------------- build/vignette.rds |binary inst/doc/DCEtool.html | 439 +++++++++++++++++++++++++++++++++-------- man/dce_toolbox.Rd | 13 - 7 files changed, 750 insertions(+), 332 deletions(-)
Title: Propensity Score Matching for Unordered 3-Group Data
Description: You can use this program for 3 sets of categorical data for propensity score matching.
Assume that the data has 3 different categorical variables. You can use it to perform propensity matching of baseline indicator groupings.
The matching will make the differences in the baseline data smaller.
This method was described by Alvaro Fuentes (2022) <doi:10.1080/00273171.2021.1925521>.
Author: Qiang LIU [aut, cre]
Maintainer: Qiang LIU <dege857@163.com>
Diff between pm3 versions 0.1.8 dated 2023-06-08 and 0.1.9 dated 2023-06-17
DESCRIPTION | 6 +++--- MD5 | 4 ++-- R/pm3.R | 9 +++++---- 3 files changed, 10 insertions(+), 9 deletions(-)
Title: Select and Download Climate Data from 'DWD' (German Weather
Service)
Description: Handle climate data from the 'DWD' ('Deutscher Wetterdienst', see
<https://www.dwd.de/EN/climate_environment/cdc/cdc_node_en.html> for more information).
Choose observational time series from meteorological stations with 'selectDWD()'.
Find raster data from radar and interpolation according to <https://bookdown.org/brry/rdwd/raster-data.html>.
Download (multiple) data sets with progress bars and no re-downloads through 'dataDWD()'.
Read both tabular observational data and binary gridded datasets with 'readDWD()'.
Author: Berry Boessenkool
Maintainer: Berry Boessenkool <berry-b@gmx.de>
Diff between rdwd versions 1.7.1 dated 2023-04-15 and 1.8.0 dated 2023-06-17
rdwd-1.7.1/rdwd/inst/extdata/DEU.rda |only rdwd-1.7.1/rdwd/inst/extdata/EUR.rda |only rdwd-1.7.1/rdwd/man/DEU.Rd |only rdwd-1.7.1/rdwd/man/EUR.Rd |only rdwd-1.8.0/rdwd/DESCRIPTION | 13 rdwd-1.8.0/rdwd/MD5 | 74 +- rdwd-1.8.0/rdwd/NAMESPACE | 1 rdwd-1.8.0/rdwd/NEWS.md | 6 rdwd-1.8.0/rdwd/R/addBorders.R | 106 +-- rdwd-1.8.0/rdwd/R/plotRadar.R | 84 +-- rdwd-1.8.0/rdwd/R/projectRasterDWD.R | 73 +- rdwd-1.8.0/rdwd/R/rdwd-package.R | 50 - rdwd-1.8.0/rdwd/R/readDWD.R | 186 ++---- rdwd-1.8.0/rdwd/R/runLocalTests.R | 44 - rdwd-1.8.0/rdwd/R/updateIndexes.R | 4 rdwd-1.8.0/rdwd/README.md | 4 rdwd-1.8.0/rdwd/build/vignette.rds |binary rdwd-1.8.0/rdwd/data/datalist | 10 rdwd-1.8.0/rdwd/data/fileIndex.rda |binary rdwd-1.8.0/rdwd/data/formatIndex.rda |binary rdwd-1.8.0/rdwd/data/geoIndex.rda |binary rdwd-1.8.0/rdwd/data/gridIndex.rda |binary rdwd-1.8.0/rdwd/data/metaIndex.rda |binary rdwd-1.8.0/rdwd/inst/doc/rdwd.html | 562 ++++++++++----------- rdwd-1.8.0/rdwd/inst/extdata/DEU.gpkg |only rdwd-1.8.0/rdwd/inst/extdata/EUR.gpkg |only rdwd-1.8.0/rdwd/inst/shinyapps/compare_years/app.R | 4 rdwd-1.8.0/rdwd/man/addBorders.Rd | 41 + rdwd-1.8.0/rdwd/man/plotRadar.Rd | 33 - rdwd-1.8.0/rdwd/man/projectRasterDWD.Rd | 23 rdwd-1.8.0/rdwd/man/rdwd.Rd | 7 rdwd-1.8.0/rdwd/man/readDWD.Rd | 4 rdwd-1.8.0/rdwd/man/readDWD.asc.Rd | 20 rdwd-1.8.0/rdwd/man/readDWD.binary.Rd | 2 rdwd-1.8.0/rdwd/man/readDWD.grib2.Rd | 24 rdwd-1.8.0/rdwd/man/readDWD.multia.Rd | 15 rdwd-1.8.0/rdwd/man/readDWD.nc.Rd | 23 rdwd-1.8.0/rdwd/man/readDWD.radar.Rd | 2 rdwd-1.8.0/rdwd/man/readDWD.raster.Rd | 14 rdwd-1.8.0/rdwd/man/readDWD.rklim.Rd | 23 rdwd-1.8.0/rdwd/man/updateIndexes.Rd | 4 41 files changed, 700 insertions(+), 756 deletions(-)
Title: Functions for Common Chart Types
Description: Wrapper for the 'ggplot2' package that creates a variety of common
charts (e.g. bar, line, area, ROC, waterfall, pie) while aiming to reduce
typing.
Author: Wojtek Kostelecki
Maintainer: Wojtek Kostelecki <wojtek.kostelecki@gmail.com>
Diff between ezplot versions 0.7.7 dated 2023-06-03 and 0.7.8 dated 2023-06-17
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- NEWS.md | 3 +++ R/bar_plot.R | 40 +++++++++++++++++++++++++--------------- inst/doc/basics.html | 4 ++-- 5 files changed, 37 insertions(+), 24 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-06-15 1.9.4
2019-10-09 1.9.3
2019-09-08 1.9.2
2019-08-26 1.9
2019-08-01 1.8
2019-02-13 1.7
2018-07-31 1.6.8
2018-01-21 1.6.7
2017-12-18 1.6.6
2017-07-09 1.6.5
2017-06-17 1.6.4
2017-06-03 1.6.3
2017-03-16 1.6.2
2017-02-26 1.6.1
2017-01-12 1.6
2016-11-12 1.5
2016-10-11 1.4
2016-10-05 1.3
2016-08-10 1.2
2016-03-14 1.1
2016-02-07 1.0
Title: Generalized Network-Based Dimensionality Reduction and Analysis
Description: Non-parametric dimensionality reduction function. Reduction with and without feature selection. Plot functions. Automated feature selections. Kosztyan et. al. (2022) <doi:10.1016/j.knosys.2022.109180>.
Author: Zsolt T. Kosztyan [aut, cre],
Marcell T. Kurbucz [aut],
Attila I. Katona [aut]
Maintainer: Zsolt T. Kosztyan <kosztyan.zsolt@gtk.uni-pannon.hu>
Diff between nda versions 0.1.6 dated 2022-10-14 and 0.1.10 dated 2023-06-17
DESCRIPTION | 16 MD5 | 58 +- NAMESPACE | 21 R/biplot.nda.R | 45 - R/dCor.R | 7 R/dCov.R |only R/data_gen.R | 7 R/fs.KMO.R |only R/fs.dimred.R |only R/nda.R | 1402 +++++++++++++++++++++++++++++++------------------ R/ndr.R | 741 ++++++++++++++----------- R/pdCor.R |only R/plot.nda.R | 57 + R/spdCor.R |only R/summary.nda.R | 8 inst/CITATION | 34 - inst/NEWS | 94 +-- man/COVID19_2020.Rd | 4 man/CWTS_2020.Rd | 4 man/CrimesUSA1990.X.Rd | 2 man/CrimesUSA1990.Y.Rd | 2 man/GOVDB2020.Rd | 2 man/I40_2020.Rd | 4 man/biplot.nda.Rd | 82 +- man/dCor.Rd | 4 man/dCov.Rd |only man/data_gen.Rd | 6 man/fs.KMO.Rd |only man/fs.dmred.Rd |only man/nda.Rd | 8 man/ndr.Rd | 139 ++-- man/pdCor.Rd |only man/plot.nda.Rd | 104 +-- man/spdCor.Rd |only man/summary.nda.Rd | 95 +-- 35 files changed, 1768 insertions(+), 1178 deletions(-)