Title: 'Shiny' Modules for General Tasks
Description: 'Shiny' apps can often make use of the same key elements, this package provides modules for common tasks (data upload, wrangling data, figure generation and saving the app state). These modules can react and interact as well as generate code to create reproducible analyses.
Author: John Harrold [aut, cre]
Maintainer: John Harrold <john.m.harrold@gmail.com>
Diff between formods versions 0.1.1 dated 2023-08-17 and 0.1.2 dated 2023-11-26
DESCRIPTION | 8 MD5 | 70 + NAMESPACE | 5 NEWS.md | 11 R/ASM_Server.R | 28 R/DW_Server.R | 12 R/UD_Server.R | 2 R/formods.R | 426 +++++++++-- README.md | 14 inst/doc/included_modules.Rmd | 11 inst/doc/included_modules.html | 20 inst/doc/making_modules.Rmd | 90 +- inst/doc/making_modules.html | 129 ++- inst/templates/ASM_module_components.R | 14 inst/templates/DW_module_components.R | 2 inst/templates/FM_compact.R | 18 inst/templates/ZZ.yaml | 50 + inst/templates/ZZ_Server.R | 1195 +++++++++++++++++++++++++++++---- inst/templates/ZZ_module_components.R | 68 + inst/test_apps/FM_compact.R | 18 man/ASM_Server.Rd | 18 man/DW_Server.Rd | 18 man/FG_Server.Rd | 18 man/FM_fetch_app_code.Rd | 2 man/FM_fetch_app_info.Rd | 10 man/FM_fetch_ds.Rd | 2 man/FM_fetch_log_path.Rd | 2 man/FM_fetch_mdl.Rd |only man/FM_fetch_user_files_path.Rd | 4 man/FM_init_state.Rd | 2 man/FM_le.Rd | 5 man/FM_message.Rd |only man/UD_Server.Rd | 18 man/is_installed.Rd |only man/new_module_template.Rd |only man/use_formods.Rd |only tests/testthat/test-formods.R |only vignettes/included_modules.Rmd | 11 vignettes/making_modules.Rmd | 90 +- 39 files changed, 1944 insertions(+), 447 deletions(-)
Title: Optimum Sample Allocation in Stratified Sampling
Description: Functions in this package provide solution to classical problem in
survey methodology - an optimum sample allocation in stratified sampling. In
this context, the optimum allocation is in the classical Tschuprow-Neyman's
sense and it satisfies additional lower or upper bounds restrictions imposed
on sample sizes in strata. There are few different algorithms available to
use, and one them is based on popular sample allocation method that applies
Neyman allocation to recursively reduced set of strata.
This package also provides the function that computes a solution to the
minimum cost allocation problem, which is a minor modification of the
classical optimum sample allocation. This problem lies in the determination
of a vector of strata sample sizes that minimizes total cost of the survey,
under assumed fixed level of the stratified estimator's variance. As in the
case of the classical optimum allocation, the problem of minimum cost
allocation can be complemented by imposing upper-bounds [...truncated...]
Author: Wojciech Wojciak [aut, cre],
Jacek Wesolowski [sad],
Robert Wieczorkowski [ctb]
Maintainer: Wojciech Wojciak <wojciech.wojciak@gmail.com>
Diff between stratallo versions 2.2.0 dated 2023-06-24 and 2.2.1 dated 2023-11-26
stratallo-2.2.0/stratallo/tests/testthat/helper-sfun.R |only stratallo-2.2.1/stratallo/DESCRIPTION | 16 stratallo-2.2.1/stratallo/MD5 | 76 - stratallo-2.2.1/stratallo/NEWS.md | 9 stratallo-2.2.1/stratallo/R/algorithms_1sided.R | 275 ++++-- stratallo-2.2.1/stratallo/R/algorithms_2sided.R | 314 +++++-- stratallo-2.2.1/stratallo/R/algorithms_of_other_authors.R | 153 +-- stratallo-2.2.1/stratallo/R/helpers.R | 46 - stratallo-2.2.1/stratallo/R/opt.R | 98 +- stratallo-2.2.1/stratallo/R/stratallo-package.R | 8 stratallo-2.2.1/stratallo/README.md | 159 +-- stratallo-2.2.1/stratallo/build/vignette.rds |binary stratallo-2.2.1/stratallo/inst/WORDLIST | 3 stratallo-2.2.1/stratallo/inst/doc/stratallo.R | 80 - stratallo-2.2.1/stratallo/inst/doc/stratallo.Rmd | 174 ++-- stratallo-2.2.1/stratallo/inst/doc/stratallo.html | 309 +++---- stratallo-2.2.1/stratallo/man/CapacityScaling.Rd | 18 stratallo-2.2.1/stratallo/man/SimpleGreedy.Rd | 27 stratallo-2.2.1/stratallo/man/asummary.Rd | 18 stratallo-2.2.1/stratallo/man/fpia.Rd | 68 + stratallo-2.2.1/stratallo/man/opt.Rd | 75 - stratallo-2.2.1/stratallo/man/opt_1sided.Rd | 44 - stratallo-2.2.1/stratallo/man/optcost.Rd | 18 stratallo-2.2.1/stratallo/man/rna_prior.Rd | 16 stratallo-2.2.1/stratallo/man/rna_rec.Rd | 18 stratallo-2.2.1/stratallo/man/rnabox.Rd | 84 + stratallo-2.2.1/stratallo/man/stratallo-package.Rd | 8 stratallo-2.2.1/stratallo/man/var_st.Rd | 12 stratallo-2.2.1/stratallo/tests/testthat/helper-dataobjects.R | 6 stratallo-2.2.1/stratallo/tests/testthat/helper-funs.R |only stratallo-2.2.1/stratallo/tests/testthat/test-algorithms_coma.R | 22 stratallo-2.2.1/stratallo/tests/testthat/test-algorithms_rna.R | 422 +++++----- stratallo-2.2.1/stratallo/tests/testthat/test-algorithms_rna_rec.R | 42 stratallo-2.2.1/stratallo/tests/testthat/test-algorithms_rnabox.R | 216 ++++- stratallo-2.2.1/stratallo/tests/testthat/test-algorithms_sga.R | 22 stratallo-2.2.1/stratallo/tests/testthat/test-algorithms_sgaplus.R | 22 stratallo-2.2.1/stratallo/tests/testthat/test-helpers.R | 22 stratallo-2.2.1/stratallo/tests/testthat/test-opt.R | 272 +++--- stratallo-2.2.1/stratallo/tests/testthat/test-optcost.R | 240 ++--- stratallo-2.2.1/stratallo/vignettes/stratallo.Rmd | 174 ++-- 40 files changed, 2010 insertions(+), 1576 deletions(-)
Title: Efficient Bayesian Inference for Stochastic Volatility (SV)
Models
Description: Efficient algorithms for fully Bayesian estimation of stochastic volatility (SV) models with and without asymmetry (leverage) via Markov chain Monte Carlo (MCMC) methods. Methodological details are given in Kastner and Frühwirth-Schnatter (2014) <doi:10.1016/j.csda.2013.01.002> and Hosszejni and Kastner (2019) <doi:10.1007/978-3-030-30611-3_8>; the most common use cases are described in Hosszejni and Kastner (2021) <doi:10.18637/jss.v100.i12> and Kastner (2016) <doi:10.18637/jss.v069.i05> and the package examples.
Author: Darjus Hosszejni [aut, cre] ,
Gregor Kastner [aut]
Maintainer: Darjus Hosszejni <darjus.hosszejni@icloud.com>
Diff between stochvol versions 3.2.1 dated 2023-03-10 and 3.2.3 dated 2023-11-26
DESCRIPTION | 10 +++++----- MD5 | 32 ++++++++++++++++---------------- NEWS.md | 11 +++++++++++ R/simulation.R | 17 +++++++++++++---- R/util.R | 6 +++--- R/wrappers.R | 13 +++++++------ build/partial.rdb |binary build/vignette.rds |binary data/exrates.RData |binary inst/CITATION | 2 +- inst/doc/article.pdf |binary inst/doc/article2.pdf |binary man/specify_priors.Rd | 2 +- man/svlm.Rd | 2 +- man/svsample.Rd | 2 +- man/svsim.Rd | 17 +++++++++++++---- src/sampling_main.cc | 6 +++--- 17 files changed, 75 insertions(+), 45 deletions(-)
Title: Classes and Methods for Spatial Data
Description: Classes and methods for spatial
data; the classes document where the spatial location information
resides, for 2D or 3D data. Utility functions are provided, e.g. for
plotting data as maps, spatial selection, as well as methods for
retrieving coordinates, for subsetting, print, summary, etc. From this
version, 'rgdal', 'maptools', and 'rgeos' are no longer used at all,
see <https://r-spatial.org/r/2023/05/15/evolution4.html> for details.
Author: Edzer Pebesma [aut, cre],
Roger Bivand [aut],
Barry Rowlingson [ctb],
Virgilio Gomez-Rubio [ctb],
Robert Hijmans [ctb],
Michael Sumner [ctb],
Don MacQueen [ctb],
Jim Lemon [ctb],
Finn Lindgren [ctb],
Josh O'Brien [ctb],
Joseph O'Rourke [ctb],
Patrick [...truncated...]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between sp versions 2.1-1 dated 2023-10-16 and 2.1-2 dated 2023-11-26
DESCRIPTION | 6 +++--- MD5 | 24 ++++++++++++------------ build/vignette.rds |binary demo/meuse.R | 2 +- inst/NEWS.Rd | 5 +++++ inst/doc/csdacm.pdf |binary inst/doc/intro_sp.pdf |binary inst/doc/retiring_rgdal_geos_1.html | 2 +- inst/include/sp.h | 2 +- inst/include/sp_xports.c | 4 ++++ src/sp.h | 2 +- src/sp_xports.c | 4 ++++ src/zerodist.c | 8 ++++---- 13 files changed, 36 insertions(+), 23 deletions(-)
Title: Infrastructure for Ordering Objects Using Seriation
Description: Infrastructure for ordering objects with an implementation of several
seriation/sequencing/ordination techniques to reorder matrices, dissimilarity
matrices, and dendrograms. Also provides (optimally) reordered heatmaps,
color images and clustering visualizations like dissimilarity plots, and
visual assessment of cluster tendency plots (VAT and iVAT). Hahsler et al (2008) <doi:10.18637/jss.v025.i03>.
Author: Michael Hahsler [aut, cre, cph]
,
Christian Buchta [aut, cph],
Kurt Hornik [aut, cph] ,
David Barnett [ctb],
Michael Brusco [ctb, cph],
Michael Friendly [ctb],
Hans-Friedrich Koehn [ctb, cph],
Fionn Murtagh [ctb, cph],
Stephanie Stahl [ctb, cph]
Maintainer: Michael Hahsler <mhahsler@lyle.smu.edu>
Diff between seriation versions 1.5.1 dated 2023-07-20 and 1.5.2 dated 2023-11-26
seriation-1.5.1/seriation/R/hclust_greedy.R |only seriation-1.5.1/seriation/src/greedy.c |only seriation-1.5.2/seriation/DESCRIPTION | 22 +- seriation-1.5.2/seriation/MD5 | 101 ++++------ seriation-1.5.2/seriation/NEWS.md | 22 +- seriation-1.5.2/seriation/R/AAA_defaults.R | 5 seriation-1.5.2/seriation/R/AAA_parameters.R | 11 - seriation-1.5.2/seriation/R/AAA_registry_criterion.R | 4 seriation-1.5.2/seriation/R/AAA_registry_seriate.R | 20 + seriation-1.5.2/seriation/R/Zoo.R | 9 seriation-1.5.2/seriation/R/criterion.dist.R | 5 seriation-1.5.2/seriation/R/ggpimage.R | 3 seriation-1.5.2/seriation/R/permute.R | 48 +++- seriation-1.5.2/seriation/R/pimage.R | 4 seriation-1.5.2/seriation/R/register_DendSer.R | 31 +-- seriation-1.5.2/seriation/R/register_GA.R | 2 seriation-1.5.2/seriation/R/register_smacof.R | 6 seriation-1.5.2/seriation/R/seriate.R | 50 +++- seriation-1.5.2/seriation/R/seriate.array.R | 7 seriation-1.5.2/seriation/R/seriate.data.frame.R | 7 seriation-1.5.2/seriation/R/seriate.dist.R | 3 seriation-1.5.2/seriation/R/seriate.matrix.R | 8 seriation-1.5.2/seriation/R/seriate_AOE.R |only seriation-1.5.2/seriation/R/seriate_ARSA_Branch-Bound.R | 6 seriation-1.5.2/seriation/R/seriate_BEA.R | 23 -- seriation-1.5.2/seriation/R/seriate_GSA.R | 1 seriation-1.5.2/seriation/R/seriate_HC.R | 28 +- seriation-1.5.2/seriation/R/seriate_MDS.R | 10 seriation-1.5.2/seriation/R/seriate_Mean.R | 3 seriation-1.5.2/seriation/R/seriate_PCA.R | 20 - seriation-1.5.2/seriation/R/seriate_QAP.R | 8 seriation-1.5.2/seriation/R/seriate_R2E.R | 8 seriation-1.5.2/seriation/R/seriate_SGD.R | 1 seriation-1.5.2/seriation/R/seriate_SPIN.R | 4 seriation-1.5.2/seriation/R/seriate_TSP.R | 2 seriation-1.5.2/seriation/R/seriate_best.R | 67 ++++-- seriation-1.5.2/seriation/R/seriate_enumerate.R | 2 seriation-1.5.2/seriation/R/seriate_spectral.R | 4 seriation-1.5.2/seriation/R/seriate_vegan.R | 8 seriation-1.5.2/seriation/README.md | 17 - seriation-1.5.2/seriation/build/partial.rdb |binary seriation-1.5.2/seriation/build/vignette.rds |binary seriation-1.5.2/seriation/inst/doc/seriation.pdf |binary seriation-1.5.2/seriation/man/Zoo.Rd | 9 seriation-1.5.2/seriation/man/permute.Rd | 26 +- seriation-1.5.2/seriation/man/pimage.Rd | 4 seriation-1.5.2/seriation/man/registry_for_seriaiton_methods.Rd | 4 seriation-1.5.2/seriation/man/seriate.Rd | 69 ++++-- seriation-1.5.2/seriation/man/seriate_best.Rd | 40 +++ seriation-1.5.2/seriation/src/init.c | 4 seriation-1.5.2/seriation/src/nextperm.c | 2 seriation-1.5.2/seriation/src/optimal.c | 7 seriation-1.5.2/seriation/tests/testthat/test-seriate.R | 33 ++- 53 files changed, 486 insertions(+), 292 deletions(-)
Title: Solve Systems of Nonlinear Equations
Description: Solve a system of nonlinear equations using a Broyden or a Newton method
with a choice of global strategies such as line search and trust region.
There are options for using a numerical or user supplied Jacobian,
for specifying a banded numerical Jacobian and for allowing
a singular or ill-conditioned Jacobian.
Author: Berend Hasselman
Maintainer: Berend Hasselman <bhh@xs4all.nl>
Diff between nleqslv versions 3.3.4 dated 2023-01-14 and 3.3.5 dated 2023-11-26
nleqslv-3.3.4/nleqslv/tests/brdban.Rout |only nleqslv-3.3.4/nleqslv/tests/brdbanded.Rout |only nleqslv-3.3.4/nleqslv/tests/brdtri.Rout |only nleqslv-3.3.4/nleqslv/tests/brdtrijac.Rout |only nleqslv-3.3.4/nleqslv/tests/chquad.Rout |only nleqslv-3.3.4/nleqslv/tests/dslnex.Rout |only nleqslv-3.3.4/nleqslv/tests/dslnexCN.Rout |only nleqslv-3.3.4/nleqslv/tests/dslnexHook.Rout |only nleqslv-3.3.4/nleqslv/tests/dslnexauto.Rout |only nleqslv-3.3.4/nleqslv/tests/dslnexjacout.Rout |only nleqslv-3.3.4/nleqslv/tests/dslnexscaled.Rout |only nleqslv-3.3.4/nleqslv/tests/singular1.Rout |only nleqslv-3.3.4/nleqslv/tests/singular2.Rout |only nleqslv-3.3.4/nleqslv/tests/singular3.Rout |only nleqslv-3.3.4/nleqslv/tests/trig.Rout |only nleqslv-3.3.4/nleqslv/tests/xcutlip1p2.Rout |only nleqslv-3.3.4/nleqslv/tests/xnames.Rout |only nleqslv-3.3.4/nleqslv/tests/xsearchzeros.Rout |only nleqslv-3.3.4/nleqslv/tests/xtestnslv.Rout |only nleqslv-3.3.5/nleqslv/DESCRIPTION | 8 ++++---- nleqslv-3.3.5/nleqslv/MD5 | 25 +++---------------------- nleqslv-3.3.5/nleqslv/NEWS | 4 ++++ nleqslv-3.3.5/nleqslv/build/partial.rdb |binary 23 files changed, 11 insertions(+), 26 deletions(-)
Title: Interact with 'Bluesky' Social
Description: Collect data from and make posts on 'Bluesky' Social
via the Hypertext Transfer Protocol (HTTP) Application Programming
Interface (API), as documented at <https://atproto.com/specs/xrpc>. This
further supports broader queries to the Authenticated Transfer (AT) Protocol
<https://atproto.com/> which 'Bluesky' Social relies on. Data is returned in a
tidy format and posts can be made using a simple interface.
Author: Christopher T. Kenny [aut, cre]
Maintainer: Christopher T. Kenny <christopherkenny@fas.harvard.edu>
Diff between bskyr versions 0.0.4 dated 2023-11-10 and 0.1.0 dated 2023-11-26
bskyr-0.0.4/bskyr/R/post.R |only bskyr-0.1.0/bskyr/DESCRIPTION | 10 bskyr-0.1.0/bskyr/MD5 | 184 ++++++---- bskyr-0.1.0/bskyr/NAMESPACE | 11 bskyr-0.1.0/bskyr/NEWS.md | 26 + bskyr-0.1.0/bskyr/R/actor_preferences.R | 79 ++-- bskyr-0.1.0/bskyr/R/actor_profile.R | 5 bskyr-0.1.0/bskyr/R/actor_search.R | 24 + bskyr-0.1.0/bskyr/R/actor_suggestions.R | 26 + bskyr-0.1.0/bskyr/R/created_at.R |only bskyr-0.1.0/bskyr/R/feed_author_feed.R | 101 +++-- bskyr-0.1.0/bskyr/R/feed_feed.R | 24 + bskyr-0.1.0/bskyr/R/feed_feed_generator.R | 9 bskyr-0.1.0/bskyr/R/feed_feed_generators.R | 9 bskyr-0.1.0/bskyr/R/feed_feed_skeleton.R |only bskyr-0.1.0/bskyr/R/feed_feeds.R | 104 +++-- bskyr-0.1.0/bskyr/R/feed_get_posts.R | 143 +++---- bskyr-0.1.0/bskyr/R/feed_likes.R | 100 +++-- bskyr-0.1.0/bskyr/R/feed_list_feed.R | 95 ++--- bskyr-0.1.0/bskyr/R/feed_post_likes.R | 102 +++-- bskyr-0.1.0/bskyr/R/feed_post_thread.R | 129 ++++--- bskyr-0.1.0/bskyr/R/feed_reposts.R | 102 +++-- bskyr-0.1.0/bskyr/R/feed_search.R | 81 ++-- bskyr-0.1.0/bskyr/R/feed_suggestions.R | 25 + bskyr-0.1.0/bskyr/R/feed_timeline.R | 25 + bskyr-0.1.0/bskyr/R/graph_actor_lists.R | 33 + bskyr-0.1.0/bskyr/R/graph_blocked_lists.R | 83 ++-- bskyr-0.1.0/bskyr/R/graph_blocks.R | 83 ++-- bskyr-0.1.0/bskyr/R/graph_follow_suggestions.R | 7 bskyr-0.1.0/bskyr/R/graph_followers.R | 117 +++--- bskyr-0.1.0/bskyr/R/graph_follows.R | 119 +++--- bskyr-0.1.0/bskyr/R/graph_list.R | 120 +++--- bskyr-0.1.0/bskyr/R/graph_muted_lists.R | 69 +-- bskyr-0.1.0/bskyr/R/graph_mutes.R | 83 ++-- bskyr-0.1.0/bskyr/R/identity_resolve_handle.R |only bskyr-0.1.0/bskyr/R/notification_notification_count.R | 5 bskyr-0.1.0/bskyr/R/notification_notifications.R | 87 ++-- bskyr-0.1.0/bskyr/R/parse.R | 145 +++++++ bskyr-0.1.0/bskyr/R/record_like.R |only bskyr-0.1.0/bskyr/R/record_post.R |only bskyr-0.1.0/bskyr/R/record_repost.R |only bskyr-0.1.0/bskyr/R/repo_create_record.R |only bskyr-0.1.0/bskyr/R/repo_delete_record.R |only bskyr-0.1.0/bskyr/R/repo_describe_repo.R |only bskyr-0.1.0/bskyr/R/repo_get_record.R |only bskyr-0.1.0/bskyr/R/repo_list_records.R |only bskyr-0.1.0/bskyr/R/repo_upload_blob.R | 78 ++-- bskyr-0.1.0/bskyr/R/roxygen.R | 127 +++++- bskyr-0.1.0/bskyr/R/url_uri.R |only bskyr-0.1.0/bskyr/R/utils.R | 36 + bskyr-0.1.0/bskyr/README.md | 24 - bskyr-0.1.0/bskyr/inst/WORDLIST | 8 bskyr-0.1.0/bskyr/man/bs_create_record.Rd |only bskyr-0.1.0/bskyr/man/bs_created_at.Rd |only bskyr-0.1.0/bskyr/man/bs_delete_record.Rd |only bskyr-0.1.0/bskyr/man/bs_describe_repo.Rd |only bskyr-0.1.0/bskyr/man/bs_get_actor_lists.Rd | 10 bskyr-0.1.0/bskyr/man/bs_get_actor_suggestions.Rd | 10 bskyr-0.1.0/bskyr/man/bs_get_author_feed.Rd | 10 bskyr-0.1.0/bskyr/man/bs_get_blocked_lists.Rd | 10 bskyr-0.1.0/bskyr/man/bs_get_blocks.Rd | 10 bskyr-0.1.0/bskyr/man/bs_get_feed.Rd | 10 bskyr-0.1.0/bskyr/man/bs_get_feed_generator.Rd | 7 bskyr-0.1.0/bskyr/man/bs_get_feed_generators.Rd | 7 bskyr-0.1.0/bskyr/man/bs_get_feed_suggestions.Rd | 10 bskyr-0.1.0/bskyr/man/bs_get_feeds.Rd | 10 bskyr-0.1.0/bskyr/man/bs_get_follow_suggestions.Rd | 7 bskyr-0.1.0/bskyr/man/bs_get_followers.Rd | 10 bskyr-0.1.0/bskyr/man/bs_get_follows.Rd | 10 bskyr-0.1.0/bskyr/man/bs_get_likes.Rd | 10 bskyr-0.1.0/bskyr/man/bs_get_muted_lists.Rd | 7 bskyr-0.1.0/bskyr/man/bs_get_mutes.Rd | 10 bskyr-0.1.0/bskyr/man/bs_get_notification_count.Rd | 5 bskyr-0.1.0/bskyr/man/bs_get_notifications.Rd | 8 bskyr-0.1.0/bskyr/man/bs_get_post_likes.Rd | 10 bskyr-0.1.0/bskyr/man/bs_get_post_thread.Rd | 13 bskyr-0.1.0/bskyr/man/bs_get_posts.Rd | 7 bskyr-0.1.0/bskyr/man/bs_get_preferences.Rd | 7 bskyr-0.1.0/bskyr/man/bs_get_profile.Rd | 5 bskyr-0.1.0/bskyr/man/bs_get_record.Rd |only bskyr-0.1.0/bskyr/man/bs_get_reposts.Rd | 10 bskyr-0.1.0/bskyr/man/bs_get_timeline.Rd | 10 bskyr-0.1.0/bskyr/man/bs_like.Rd |only bskyr-0.1.0/bskyr/man/bs_list_records.Rd |only bskyr-0.1.0/bskyr/man/bs_post.Rd | 42 +- bskyr-0.1.0/bskyr/man/bs_repost.Rd |only bskyr-0.1.0/bskyr/man/bs_resolve_handle.Rd |only bskyr-0.1.0/bskyr/man/bs_search_actors.Rd | 10 bskyr-0.1.0/bskyr/man/bs_upload_blob.Rd |only bskyr-0.1.0/bskyr/man/bs_uri_to_url.Rd |only bskyr-0.1.0/bskyr/tests/testthat/setup.R | 18 bskyr-0.1.0/bskyr/tests/testthat/t/a/preferencesL |only bskyr-0.1.0/bskyr/tests/testthat/t/i |only bskyr-0.1.0/bskyr/tests/testthat/t/n/ncL |only bskyr-0.1.0/bskyr/tests/testthat/t/r |only bskyr-0.1.0/bskyr/tests/testthat/test-actor_preferences.R | 7 bskyr-0.1.0/bskyr/tests/testthat/test-actor_suggestions.R | 2 bskyr-0.1.0/bskyr/tests/testthat/test-created_at.R |only bskyr-0.1.0/bskyr/tests/testthat/test-feed_post_thread.R | 2 bskyr-0.1.0/bskyr/tests/testthat/test-graph_follow_suggestions.R | 7 bskyr-0.1.0/bskyr/tests/testthat/test-identity_resolve_handle.R |only bskyr-0.1.0/bskyr/tests/testthat/test-notification_notification_count.R | 7 bskyr-0.1.0/bskyr/tests/testthat/test-parse.R |only bskyr-0.1.0/bskyr/tests/testthat/test-record_like.R |only bskyr-0.1.0/bskyr/tests/testthat/test-record_post.R |only bskyr-0.1.0/bskyr/tests/testthat/test-repo_describe_repo.R |only bskyr-0.1.0/bskyr/tests/testthat/test-repo_get_record.R |only bskyr-0.1.0/bskyr/tests/testthat/test-repo_list_records.R |only bskyr-0.1.0/bskyr/tests/testthat/test-repo_upload_blob.R |only bskyr-0.1.0/bskyr/tests/testthat/test-url_uri.R |only 110 files changed, 1909 insertions(+), 1047 deletions(-)
Title: R Interface to the 'QuantLib' Library
Description: The 'RQuantLib' package makes parts of 'QuantLib' accessible from R
The 'QuantLib' project aims to provide a comprehensive software framework
for quantitative finance. The goal is to provide a standard open source library
for quantitative analysis, modeling, trading, and risk management of financial
assets.
Author: Dirk Eddelbuettel, Khanh Nguyen , Terry Leitch
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RQuantLib versions 0.4.19 dated 2023-08-07 and 0.4.20 dated 2023-11-26
ChangeLog | 22 ++++++++++ DESCRIPTION | 8 +-- MD5 | 30 +++++++------- configure | 18 ++++---- configure.ac | 2 data/tsQuotes.RData |binary data/vcube.RData |binary inst/NEWS.Rd | 10 ++++ man/AffineSwaption.Rd | 6 +- man/BermudanSwaption.Rd | 2 man/CallableBond.Rd | 101 ++++++++++++++++++++++++------------------------ man/SabrSwaption.Rd | 6 +- src/Makevars.in | 4 - src/RcppExports.cpp | 60 ++++++++++++++-------------- src/affine.cpp | 6 +- src/bermudan.cpp | 6 +- 16 files changed, 157 insertions(+), 124 deletions(-)
Title: Calculate Pairwise Multiple Comparisons of Mean Rank Sums
Extended
Description: For one-way layout experiments the one-way ANOVA can
be performed as an omnibus test. All-pairs multiple comparisons
tests (Tukey-Kramer test, Scheffe test, LSD-test)
and many-to-one tests (Dunnett test) for normally distributed
residuals and equal within variance are available. Furthermore,
all-pairs tests (Games-Howell test, Tamhane's T2 test,
Dunnett T3 test, Ury-Wiggins-Hochberg test) and many-to-one
(Tamhane-Dunnett Test) for normally distributed residuals
and heterogeneous variances are provided. Van der Waerden's normal
scores test for omnibus, all-pairs and many-to-one tests is
provided for non-normally distributed residuals and homogeneous
variances. The Kruskal-Wallis, BWS and Anderson-Darling
omnibus test and all-pairs tests
(Nemenyi test, Dunn test, Conover test, Dwass-Steele-Critchlow-
Fligner test) as well as many-to-one (Nemenyi test, Dunn test,
U-test) are given for the analysis of variance by ranks.
Non-parametric trend tests (Jonckheere test, Cuzick test,
Johnson-Mehr [...truncated...]
Author: Thorsten Pohlert [aut, cre]
Maintainer: Thorsten Pohlert <thorsten.pohlert@gmx.de>
Diff between PMCMRplus versions 1.9.8 dated 2023-10-09 and 1.9.9 dated 2023-11-26
DESCRIPTION | 8 +++---- MD5 | 42 +++++++++++++++++++------------------- R/skillingsMackTest.R | 20 ++++++++++++++---- inst/NEWS.Rd | 12 +++++++++- inst/doc/QuickReferenceGuide.html | 4 +-- man/adManyOneTest.Rd | 7 +++--- man/bwsManyOneTest.Rd | 7 +++--- man/bwsTrendTest.Rd | 7 +++--- man/chackoTest.Rd | 7 +++--- man/chenTest.Rd | 7 +++--- man/cuzickTest.Rd | 7 +++--- man/flignerWolfeTest.Rd | 7 +++--- man/johnsonTest.Rd | 7 +++--- man/jonckheereTest.Rd | 7 +++--- man/kwManyOneConoverTest.Rd | 7 +++--- man/kwManyOneDunnTest.Rd | 7 +++--- man/leTest.Rd | 7 +++--- man/manyOneUTest.Rd | 7 +++--- man/normalScoresManyOneTest.Rd | 7 +++--- man/shanTest.Rd | 7 +++--- man/spearmanTest.Rd | 7 +++--- man/stepDownTrendTest.Rd | 4 +-- 22 files changed, 120 insertions(+), 82 deletions(-)
Title: Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata',
'Systat', 'Weka', 'dBase', ...
Description: Reading and writing data stored by some versions of
'Epi Info', 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka',
and for reading and writing some 'dBase' files.
Author: R Core Team [aut, cph, cre],
Roger Bivand [ctb, cph],
Vincent J. Carey [ctb, cph],
Saikat DebRoy [ctb, cph],
Stephen Eglen [ctb, cph],
Rajarshi Guha [ctb, cph],
Swetlana Herbrandt [ctb],
Nicholas Lewin-Koh [ctb, cph],
Mark Myatt [ctb, cph],
Michael N [...truncated...]
Maintainer: R Core Team <R-core@R-project.org>
Diff between foreign versions 0.8-85 dated 2023-09-09 and 0.8-86 dated 2023-11-26
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- src/R_systat.c | 32 ++++++++++++++++---------------- src/pfm-read.c | 6 +++--- src/sfm-read.c | 8 ++++---- 5 files changed, 31 insertions(+), 31 deletions(-)
Title: Explore Temporal Signal of Molecular Phylogenies
Description: Sequences sampled at different time points can be used to infer molecular phylogenies on natural time scales, but if the sequences records inaccurate sampling times, that are not the actual sampling times, then it will affect the molecular phylogenetic analysis. This shiny application helps exploring temporal characteristics of the evolutionary trees through linear regression analysis and with the ability to identify and remove incorrect labels.
Author: Guangchuang Yu [aut, cre, cph]
,
Xuanan Zhu [aut],
Jianfeng Lin [ctb]
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Diff between shinyTempSignal versions 0.0.3 dated 2022-07-06 and 0.0.4 dated 2023-11-26
shinyTempSignal-0.0.3/shinyTempSignal/R/dateType1.R |only shinyTempSignal-0.0.3/shinyTempSignal/R/dateType2.R |only shinyTempSignal-0.0.3/shinyTempSignal/R/dateType3.R |only shinyTempSignal-0.0.3/shinyTempSignal/R/getdivergence.R |only shinyTempSignal-0.0.3/shinyTempSignal/R/meangroup.R |only shinyTempSignal-0.0.3/shinyTempSignal/man/dateType1.Rd |only shinyTempSignal-0.0.3/shinyTempSignal/man/dateType2.Rd |only shinyTempSignal-0.0.3/shinyTempSignal/man/dateType3.Rd |only shinyTempSignal-0.0.3/shinyTempSignal/man/getdivergence.Rd |only shinyTempSignal-0.0.3/shinyTempSignal/man/meangroup.Rd |only shinyTempSignal-0.0.4/shinyTempSignal/DESCRIPTION | 14 shinyTempSignal-0.0.4/shinyTempSignal/MD5 | 45 shinyTempSignal-0.0.4/shinyTempSignal/NAMESPACE | 87 shinyTempSignal-0.0.4/shinyTempSignal/NEWS.md |only shinyTempSignal-0.0.4/shinyTempSignal/R/app_config.R | 86 shinyTempSignal-0.0.4/shinyTempSignal/R/app_server.R | 1036 +++++----- shinyTempSignal-0.0.4/shinyTempSignal/R/app_ui.R | 251 +- shinyTempSignal-0.0.4/shinyTempSignal/R/data.R | 28 shinyTempSignal-0.0.4/shinyTempSignal/R/dateNumeric.R | 84 shinyTempSignal-0.0.4/shinyTempSignal/R/function.R | 183 - shinyTempSignal-0.0.4/shinyTempSignal/R/run_shinyTempSignal.R | 64 shinyTempSignal-0.0.4/shinyTempSignal/README.md | 52 shinyTempSignal-0.0.4/shinyTempSignal/inst/WORDLIST | 10 shinyTempSignal-0.0.4/shinyTempSignal/inst/golem-config.yml | 16 shinyTempSignal-0.0.4/shinyTempSignal/man/MCC_FluA_H3_tree.Rd | 42 shinyTempSignal-0.0.4/shinyTempSignal/man/dateNumeric.Rd | 48 shinyTempSignal-0.0.4/shinyTempSignal/man/run_shinyTempSignal.Rd | 94 shinyTempSignal-0.0.4/shinyTempSignal/tests/testthat.R | 8 shinyTempSignal-0.0.4/shinyTempSignal/tests/testthat/test-app.R | 6 29 files changed, 1111 insertions(+), 1043 deletions(-)
More information about shinyTempSignal at CRAN
Permanent link
Title: Provides Access to Git Repositories
Description: Interface to the 'libgit2' library, which is a pure C
implementation of the 'Git' core methods. Provides access to 'Git'
repositories to extract data and running some basic 'Git'
commands.
Author: See AUTHORS file.
Maintainer: Stefan Widgren <stefan.widgren@gmail.com>
Diff between git2r versions 0.32.0 dated 2023-04-12 and 0.33.0 dated 2023-11-26
git2r-0.32.0/git2r/src/libgit2/src/libgit2/netops.c |only git2r-0.32.0/git2r/src/libgit2/src/libgit2/netops.h |only git2r-0.32.0/git2r/src/libgit2/src/libgit2/transports/auth_ntlm.c |only git2r-0.32.0/git2r/src/libgit2/src/libgit2/xdiff |only git2r-0.33.0/git2r/DESCRIPTION | 8 git2r-0.33.0/git2r/MD5 | 433 ++-- git2r-0.33.0/git2r/NEWS.md | 15 git2r-0.33.0/git2r/R/blob.R | 20 git2r-0.33.0/git2r/R/git2r.R | 3 git2r-0.33.0/git2r/R/index.R | 6 git2r-0.33.0/git2r/R/merge.R | 4 git2r-0.33.0/git2r/cleanup | 2 git2r-0.33.0/git2r/configure | 358 ++-- git2r-0.33.0/git2r/configure.ac | 14 git2r-0.33.0/git2r/man/content.Rd | 8 git2r-0.33.0/git2r/man/git2r.Rd | 1 git2r-0.33.0/git2r/man/git_time.Rd | 3 git2r-0.33.0/git2r/man/when.Rd | 3 git2r-0.33.0/git2r/src/Makevars.win | 4 git2r-0.33.0/git2r/src/Makevars_libgit2.in | 37 git2r-0.33.0/git2r/src/git2r.c | 2 git2r-0.33.0/git2r/src/git2r_blob.c | 28 git2r-0.33.0/git2r/src/git2r_blob.h | 4 git2r-0.33.0/git2r/src/libgit2/deps/xdiff |only git2r-0.33.0/git2r/src/libgit2/include/git2/common.h | 27 git2r-0.33.0/git2r/src/libgit2/include/git2/diff.h | 44 git2r-0.33.0/git2r/src/libgit2/include/git2/errors.h | 6 git2r-0.33.0/git2r/src/libgit2/include/git2/index.h | 9 git2r-0.33.0/git2r/src/libgit2/include/git2/oid.h | 2 git2r-0.33.0/git2r/src/libgit2/include/git2/remote.h | 18 git2r-0.33.0/git2r/src/libgit2/include/git2/repository.h | 14 git2r-0.33.0/git2r/src/libgit2/include/git2/sys/alloc.h | 34 git2r-0.33.0/git2r/src/libgit2/include/git2/sys/commit_graph.h | 14 git2r-0.33.0/git2r/src/libgit2/include/git2/sys/midx.h | 6 git2r-0.33.0/git2r/src/libgit2/include/git2/sys/stream.h | 18 git2r-0.33.0/git2r/src/libgit2/include/git2/sys/transport.h | 22 git2r-0.33.0/git2r/src/libgit2/include/git2/version.h | 8 git2r-0.33.0/git2r/src/libgit2/include/git2/worktree.h | 4 git2r-0.33.0/git2r/src/libgit2/src/libgit2/annotated_commit.c | 4 git2r-0.33.0/git2r/src/libgit2/src/libgit2/annotated_commit.h | 2 git2r-0.33.0/git2r/src/libgit2/src/libgit2/apply.c | 7 git2r-0.33.0/git2r/src/libgit2/src/libgit2/blame.c | 39 git2r-0.33.0/git2r/src/libgit2/src/libgit2/blame_git.c | 1 git2r-0.33.0/git2r/src/libgit2/src/libgit2/branch.c | 4 git2r-0.33.0/git2r/src/libgit2/src/libgit2/cherrypick.c | 6 git2r-0.33.0/git2r/src/libgit2/src/libgit2/clone.c | 4 git2r-0.33.0/git2r/src/libgit2/src/libgit2/commit.c | 40 git2r-0.33.0/git2r/src/libgit2/src/libgit2/commit_graph.c | 157 + git2r-0.33.0/git2r/src/libgit2/src/libgit2/commit_graph.h | 24 git2r-0.33.0/git2r/src/libgit2/src/libgit2/commit_list.c | 17 git2r-0.33.0/git2r/src/libgit2/src/libgit2/commit_list.h | 1 git2r-0.33.0/git2r/src/libgit2/src/libgit2/config.c | 7 git2r-0.33.0/git2r/src/libgit2/src/libgit2/config_file.c | 22 git2r-0.33.0/git2r/src/libgit2/src/libgit2/describe.c | 17 git2r-0.33.0/git2r/src/libgit2/src/libgit2/diff.c | 23 git2r-0.33.0/git2r/src/libgit2/src/libgit2/diff.h | 12 git2r-0.33.0/git2r/src/libgit2/src/libgit2/diff_file.c | 14 git2r-0.33.0/git2r/src/libgit2/src/libgit2/diff_generate.c | 51 git2r-0.33.0/git2r/src/libgit2/src/libgit2/diff_parse.c | 24 git2r-0.33.0/git2r/src/libgit2/src/libgit2/diff_print.c | 33 git2r-0.33.0/git2r/src/libgit2/src/libgit2/diff_tform.c | 8 git2r-0.33.0/git2r/src/libgit2/src/libgit2/diff_xdiff.h | 2 git2r-0.33.0/git2r/src/libgit2/src/libgit2/email.c | 7 git2r-0.33.0/git2r/src/libgit2/src/libgit2/errors.c | 91 - git2r-0.33.0/git2r/src/libgit2/src/libgit2/fetch.c | 46 git2r-0.33.0/git2r/src/libgit2/src/libgit2/fetch.h | 2 git2r-0.33.0/git2r/src/libgit2/src/libgit2/fetchhead.c | 20 git2r-0.33.0/git2r/src/libgit2/src/libgit2/grafts.c |only git2r-0.33.0/git2r/src/libgit2/src/libgit2/grafts.h |only git2r-0.33.0/git2r/src/libgit2/src/libgit2/ident.c | 6 git2r-0.33.0/git2r/src/libgit2/src/libgit2/index.c | 439 +++- git2r-0.33.0/git2r/src/libgit2/src/libgit2/index.h | 15 git2r-0.33.0/git2r/src/libgit2/src/libgit2/indexer.c | 13 git2r-0.33.0/git2r/src/libgit2/src/libgit2/iterator.c | 25 git2r-0.33.0/git2r/src/libgit2/src/libgit2/iterator.h | 3 git2r-0.33.0/git2r/src/libgit2/src/libgit2/libgit2.c | 39 git2r-0.33.0/git2r/src/libgit2/src/libgit2/merge.c | 23 git2r-0.33.0/git2r/src/libgit2/src/libgit2/merge_file.c | 2 git2r-0.33.0/git2r/src/libgit2/src/libgit2/midx.c | 103 - git2r-0.33.0/git2r/src/libgit2/src/libgit2/midx.h | 16 git2r-0.33.0/git2r/src/libgit2/src/libgit2/notes.c | 17 git2r-0.33.0/git2r/src/libgit2/src/libgit2/object.c | 55 git2r-0.33.0/git2r/src/libgit2/src/libgit2/object.h | 6 git2r-0.33.0/git2r/src/libgit2/src/libgit2/odb.c | 16 git2r-0.33.0/git2r/src/libgit2/src/libgit2/odb_pack.c | 19 git2r-0.33.0/git2r/src/libgit2/src/libgit2/oid.c | 8 git2r-0.33.0/git2r/src/libgit2/src/libgit2/oidarray.c | 52 git2r-0.33.0/git2r/src/libgit2/src/libgit2/oidarray.h | 6 git2r-0.33.0/git2r/src/libgit2/src/libgit2/pack-objects.c | 31 git2r-0.33.0/git2r/src/libgit2/src/libgit2/pack-objects.h | 7 git2r-0.33.0/git2r/src/libgit2/src/libgit2/pack.c | 6 git2r-0.33.0/git2r/src/libgit2/src/libgit2/parse.c | 11 git2r-0.33.0/git2r/src/libgit2/src/libgit2/parse.h | 2 git2r-0.33.0/git2r/src/libgit2/src/libgit2/patch.h | 8 git2r-0.33.0/git2r/src/libgit2/src/libgit2/patch_generate.c | 29 git2r-0.33.0/git2r/src/libgit2/src/libgit2/patch_parse.c | 24 git2r-0.33.0/git2r/src/libgit2/src/libgit2/push.c | 4 git2r-0.33.0/git2r/src/libgit2/src/libgit2/reader.c | 2 git2r-0.33.0/git2r/src/libgit2/src/libgit2/rebase.c | 156 - git2r-0.33.0/git2r/src/libgit2/src/libgit2/refdb_fs.c | 35 git2r-0.33.0/git2r/src/libgit2/src/libgit2/refs.c | 9 git2r-0.33.0/git2r/src/libgit2/src/libgit2/remote.c | 21 git2r-0.33.0/git2r/src/libgit2/src/libgit2/remote.h | 1 git2r-0.33.0/git2r/src/libgit2/src/libgit2/repository.c | 885 ++++++---- git2r-0.33.0/git2r/src/libgit2/src/libgit2/repository.h | 19 git2r-0.33.0/git2r/src/libgit2/src/libgit2/reset.c | 4 git2r-0.33.0/git2r/src/libgit2/src/libgit2/revert.c | 19 git2r-0.33.0/git2r/src/libgit2/src/libgit2/revwalk.c | 30 git2r-0.33.0/git2r/src/libgit2/src/libgit2/stash.c | 17 git2r-0.33.0/git2r/src/libgit2/src/libgit2/streams/mbedtls.c | 1 git2r-0.33.0/git2r/src/libgit2/src/libgit2/streams/openssl.c | 24 git2r-0.33.0/git2r/src/libgit2/src/libgit2/streams/schannel.c |only git2r-0.33.0/git2r/src/libgit2/src/libgit2/streams/schannel.h |only git2r-0.33.0/git2r/src/libgit2/src/libgit2/streams/socket.c | 288 ++- git2r-0.33.0/git2r/src/libgit2/src/libgit2/streams/socket.h | 4 git2r-0.33.0/git2r/src/libgit2/src/libgit2/streams/stransport.c | 52 git2r-0.33.0/git2r/src/libgit2/src/libgit2/streams/tls.c | 5 git2r-0.33.0/git2r/src/libgit2/src/libgit2/submodule.h | 6 git2r-0.33.0/git2r/src/libgit2/src/libgit2/threadstate.c | 17 git2r-0.33.0/git2r/src/libgit2/src/libgit2/threadstate.h | 4 git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/auth.h | 3 git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/auth_gssapi.c |only git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/auth_negotiate.h | 2 git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/auth_ntlm.h | 2 git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/auth_ntlmclient.c |only git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/auth_sspi.c |only git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/git.c | 15 git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/http.c | 9 git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/httpclient.c | 5 git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/local.c | 17 git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/smart.c | 60 git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/smart.h | 31 git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/smart_pkt.c | 150 + git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/smart_protocol.c | 201 +- git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/ssh.c | 6 git2r-0.33.0/git2r/src/libgit2/src/libgit2/transports/winhttp.c | 29 git2r-0.33.0/git2r/src/libgit2/src/libgit2/tree-cache.c | 42 git2r-0.33.0/git2r/src/libgit2/src/libgit2/tree-cache.h | 8 git2r-0.33.0/git2r/src/libgit2/src/libgit2/tree.c | 2 git2r-0.33.0/git2r/src/libgit2/src/libgit2/worktree.c | 35 git2r-0.33.0/git2r/src/libgit2/src/util/alloc.c | 71 git2r-0.33.0/git2r/src/libgit2/src/util/alloc.h | 43 git2r-0.33.0/git2r/src/libgit2/src/util/allocators/failalloc.c | 60 git2r-0.33.0/git2r/src/libgit2/src/util/allocators/failalloc.h | 6 git2r-0.33.0/git2r/src/libgit2/src/util/allocators/stdalloc.c | 107 - 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Title: Create Actuarial Experience Studies: Prepare Data, Summarize
Results, and Create Reports
Description: Experience studies are used by actuaries to explore historical
experience across blocks of business and to inform assumption setting
activities. This package provides functions for preparing data, creating
studies, visualizing results, and beginning assumption development.
Experience study methods, including exposure calculations, are described in:
Atkinson & McGarry (2016) "Experience Study Calculations"
<https://www.soa.org/49378a/globalassets/assets/files/research/experience-study-calculations.pdf>.
The limited fluctuation credibility method used by the 'exp_stats()'
function is described in: Herzog (1999, ISBN:1-56698-374-6)
"Introduction to Credibility Theory".
Author: Matt Heaphy [aut, cre]
Maintainer: Matt Heaphy <mattrmattrs@gmail.com>
Diff between actxps versions 1.3.0 dated 2023-09-15 and 1.4.0 dated 2023-11-26
DESCRIPTION | 6 MD5 | 99 +++--- NAMESPACE | 26 + NEWS.md | 254 ++++++++------- R/add_predictions.R | 132 ++++---- R/agg_sim_dat.R |only R/exp_df_helpers.R |only R/exp_shiny.R | 38 ++ R/exp_stats.R | 27 + R/expose.R | 89 +++-- R/expose_split.R |only R/exposed_df_helpers.R | 178 +++++++++- R/exposed_df_summary.R |only R/globals.R | 4 R/sim_data.R | 2 R/tables.R | 18 - R/trx_df_helpers.R |only R/trx_stats.R | 24 + README.md | 2 data/agg_sim_dat.rda |only inst/doc/actxps.R | 1 inst/doc/actxps.Rmd | 1 inst/doc/actxps.html | 69 ++-- inst/doc/exp_summary.R | 7 inst/doc/exp_summary.Rmd | 7 inst/doc/exp_summary.html | 375 +++++++++++----------- inst/doc/exposures.R | 36 +- inst/doc/exposures.Rmd | 84 ++++- inst/doc/exposures.html | 508 +++++++++++++++++++------------ inst/doc/misc.R | 14 inst/doc/misc.Rmd | 40 ++ inst/doc/misc.html | 209 +++++++++--- inst/doc/transactions.R | 5 inst/doc/transactions.Rmd | 5 inst/doc/transactions.html | 201 +++++------- man/add_predictions.Rd | 98 ++--- man/agg_sim_dat.Rd |only man/as_exp_df.Rd |only man/as_trx_df.Rd |only man/autotable.Rd | 15 man/exp_shiny.Rd | 8 man/exp_stats.Rd | 2 man/expose.Rd | 19 - man/expose_split.Rd |only man/is_exposed_df.Rd | 16 man/sim_data.Rd | 3 man/step_expose.Rd | 3 man/summary.exposed_df.Rd |only tests/testthat/test-exp_df_helpers.R |only tests/testthat/test-expose.R | 52 +++ tests/testthat/test-exposed_df_helpers.R | 138 +++++++- tests/testthat/test-trx_df_helpers.R |only vignettes/actxps.Rmd | 1 vignettes/exp_summary.Rmd | 7 vignettes/exposures.Rmd | 84 ++++- vignettes/misc.Rmd | 40 ++ vignettes/transactions.Rmd | 5 57 files changed, 1916 insertions(+), 1036 deletions(-)
Title: Phylogenetic Structural Equation Model
Description: Applies phylogenetic comparative methods (PCM) and phylogenetic trait imputation using
structural equation models (SEM), extending methods from Thorson et al. (2023) <doi:10.1111/2041-210X.14076>.
This implementation includes a minimal set of features, to
allow users to easily read all of the documentation and source code. PCM using SEM
includes phylogenetic linear models and structural equation models as nested submodels,
but also allows imputation of missing values. Features and comparison with other packages
are described in Thorson and van der Bijl (In press).
Author: James Thorson [aut, cre] ,
Wouter van der Bijl [ctb]
Maintainer: James Thorson <James.Thorson@noaa.gov>
Diff between phylosem versions 1.1.0 dated 2023-10-06 and 1.1.1 dated 2023-11-26
phylosem-1.1.0/phylosem/inst/doc/comparison.pdf |only phylosem-1.1.0/phylosem/inst/doc/demonstration.pdf |only phylosem-1.1.0/phylosem/inst/doc/fisheries.pdf |only phylosem-1.1.0/phylosem/inst/doc/phylopath.pdf |only phylosem-1.1.0/phylosem/src/Makevars |only phylosem-1.1.0/phylosem/vignettes/comparison.html |only phylosem-1.1.0/phylosem/vignettes/demonstration.html |only phylosem-1.1.0/phylosem/vignettes/fisheries.html |only phylosem-1.1.0/phylosem/vignettes/phylopath.html |only phylosem-1.1.1/phylosem/DESCRIPTION | 12 - phylosem-1.1.1/phylosem/MD5 | 56 +++----- phylosem-1.1.1/phylosem/NEWS.md | 5 phylosem-1.1.1/phylosem/R/coerce_methods.R |only phylosem-1.1.1/phylosem/R/phylosem.R | 130 ++++--------------- phylosem-1.1.1/phylosem/build/vignette.rds |binary phylosem-1.1.1/phylosem/inst/doc/comparison.R | 2 phylosem-1.1.1/phylosem/inst/doc/comparison.Rmd | 2 phylosem-1.1.1/phylosem/inst/doc/comparison.html |only phylosem-1.1.1/phylosem/inst/doc/demonstration.R | 2 phylosem-1.1.1/phylosem/inst/doc/demonstration.Rmd | 2 phylosem-1.1.1/phylosem/inst/doc/demonstration.html |only phylosem-1.1.1/phylosem/inst/doc/fisheries.R | 19 +- phylosem-1.1.1/phylosem/inst/doc/fisheries.Rmd | 11 - phylosem-1.1.1/phylosem/inst/doc/fisheries.html |only phylosem-1.1.1/phylosem/inst/doc/phylopath.html |only phylosem-1.1.1/phylosem/man/as_fitted_DAG.Rd | 6 phylosem-1.1.1/phylosem/man/as_phylo4d.Rd | 16 +- phylosem-1.1.1/phylosem/man/as_sem.Rd | 8 - phylosem-1.1.1/phylosem/man/coef.phylosem.Rd | 42 +++--- phylosem-1.1.1/phylosem/man/phylosem.Rd | 9 + phylosem-1.1.1/phylosem/man/print.phylosem.Rd | 4 phylosem-1.1.1/phylosem/man/summary.phylosem.Rd | 4 phylosem-1.1.1/phylosem/src/phylosem.cpp | 6 phylosem-1.1.1/phylosem/vignettes/comparison.Rmd | 2 phylosem-1.1.1/phylosem/vignettes/demonstration.Rmd | 2 phylosem-1.1.1/phylosem/vignettes/fisheries.Rmd | 11 - 36 files changed, 151 insertions(+), 200 deletions(-)
Title: Recursive Partitioning for Structural Equation Models
Description: SEM Trees and SEM Forests -- an extension of model-based decision
trees and forests to Structural Equation Models (SEM). SEM trees hierarchically
split empirical data into homogeneous groups each sharing similar data patterns
with respect to a SEM by recursively selecting optimal predictors of these
differences. SEM forests are an extension of SEM trees. They are ensembles of
SEM trees each built on a random sample of the original data. By aggregating
over a forest, we obtain measures of variable importance that are more robust
than measures from single trees. A description of the method was published by
Brandmaier, von Oertzen, McArdle, & Lindenberger (2013) <doi:10.1037/a0030001>
and Arnold, Voelkle, & Brandmaier (2020) <doi:10.3389/fpsyg.2020.564403>.
Author: Andreas M. Brandmaier [aut, cre],
John J. Prindle [aut],
Manuel Arnold [aut],
Caspar J. Van Lissa [aut]
Maintainer: Andreas M. Brandmaier <andy@brandmaier.de>
Diff between semtree versions 0.9.18 dated 2022-05-13 and 0.9.19 dated 2023-11-26
semtree-0.9.18/semtree/R/checkBinSize.R |only semtree-0.9.18/semtree/R/scaled_cutpoint.R |only semtree-0.9.18/semtree/R/sctest_info.R |only semtree-0.9.18/semtree/tests/Rplots.pdf |only semtree-0.9.18/semtree/tests/testthat/Rplots.pdf |only semtree-0.9.19/semtree/DESCRIPTION | 22 semtree-0.9.19/semtree/MD5 | 191 +- semtree-0.9.19/semtree/NAMESPACE | 8 semtree-0.9.19/semtree/NEWS.md | 14 semtree-0.9.19/semtree/R/aggregateVarimp.R | 3 semtree-0.9.19/semtree/R/boruta.R |only semtree-0.9.19/semtree/R/checkControl.R | 114 - semtree-0.9.19/semtree/R/coef_ctsem.R |only semtree-0.9.19/semtree/R/ctsemScores.R |only semtree-0.9.19/semtree/R/evaluateDataLikelihood.R | 54 semtree-0.9.19/semtree/R/fairSplit.R | 8 semtree-0.9.19/semtree/R/findDefinitionVariables.R |only semtree-0.9.19/semtree/R/fitSubmodels.R | 48 semtree-0.9.19/semtree/R/getCovariatesFromTree.R | 17 semtree-0.9.19/semtree/R/getLikelihood.R | 2 semtree-0.9.19/semtree/R/getParDiffForest.R |only semtree-0.9.19/semtree/R/getParDiffTree.R |only semtree-0.9.19/semtree/R/getPredictorsLavaan.R |only semtree-0.9.19/semtree/R/getPredictorsOpenMx.R |only semtree-0.9.19/semtree/R/growTree.R | 127 - semtree-0.9.19/semtree/R/invarianceFilter.R | 4 semtree-0.9.19/semtree/R/mergeForests.R | 16 semtree-0.9.19/semtree/R/minus2logLik_from_fitted_models.R |only semtree-0.9.19/semtree/R/mxScores.R | 2 semtree-0.9.19/semtree/R/naiveSplit.R | 6 semtree-0.9.19/semtree/R/naiveSplitScoreTest.R | 503 +++-- semtree-0.9.19/semtree/R/nobs.R | 7 semtree-0.9.19/semtree/R/nobs.ctsemFit.R |only semtree-0.9.19/semtree/R/nodeFunSemtree.R | 3 semtree-0.9.19/semtree/R/parameters.R | 10 semtree-0.9.19/semtree/R/plot.diversityMatrix.R | 6 semtree-0.9.19/semtree/R/plot.semforest.varimp.R | 211 +- semtree-0.9.19/semtree/R/plot.semtree.R | 1 semtree-0.9.19/semtree/R/plot.varimpConvergence.R | 13 semtree-0.9.19/semtree/R/plotParDiffForest.R |only semtree-0.9.19/semtree/R/plotParDiffTree.R |only semtree-0.9.19/semtree/R/plotTreeStructure.R |only semtree-0.9.19/semtree/R/print.semforest.varimp.R | 23 semtree-0.9.19/semtree/R/print.semtree.R | 108 - semtree-0.9.19/semtree/R/prune.semforest.R | 2 semtree-0.9.19/semtree/R/safeRunAndEvaluate.R | 5 semtree-0.9.19/semtree/R/scoreSplit.R |only semtree-0.9.19/semtree/R/sctest_continuous.R |only semtree-0.9.19/semtree/R/sctest_continuous2.R |only semtree-0.9.19/semtree/R/sctest_dummy.R |only semtree-0.9.19/semtree/R/sctest_multinomial.R |only semtree-0.9.19/semtree/R/sctest_ordinal.R |only semtree-0.9.19/semtree/R/semforest.R | 13 semtree-0.9.19/semtree/R/semforest.control.R | 17 semtree-0.9.19/semtree/R/semtree-package.R | 46 semtree-0.9.19/semtree/R/semtree.R | 95 - semtree-0.9.19/semtree/R/semtree.apply.wrapper.R | 83 semtree-0.9.19/semtree/R/semtree.control.R | 50 semtree-0.9.19/semtree/R/setData.R | 42 semtree-0.9.19/semtree/R/testInvariance.R | 4 semtree-0.9.19/semtree/R/toTable.R | 20 semtree-0.9.19/semtree/R/varimp-convergence-plot.R | 19 semtree-0.9.19/semtree/R/varimp.R | 4 semtree-0.9.19/semtree/R/varimpFocus.R | 118 - semtree-0.9.19/semtree/R/varimpTree.R | 64 semtree-0.9.19/semtree/R/vcov_semtree.R | 35 semtree-0.9.19/semtree/build/vignette.rds |binary semtree-0.9.19/semtree/inst/doc/constraints.R | 35 semtree-0.9.19/semtree/inst/doc/constraints.Rmd | 38 semtree-0.9.19/semtree/inst/doc/constraints.html | 949 +++++++--- semtree-0.9.19/semtree/inst/doc/forests.R | 2 semtree-0.9.19/semtree/inst/doc/forests.Rmd | 10 semtree-0.9.19/semtree/inst/doc/forests.html | 554 +++-- semtree-0.9.19/semtree/inst/doc/getting-started.R | 19 semtree-0.9.19/semtree/inst/doc/getting-started.Rmd | 29 semtree-0.9.19/semtree/inst/doc/getting-started.html | 493 +++-- semtree-0.9.19/semtree/inst/doc/score-based-tests.R | 6 semtree-0.9.19/semtree/inst/doc/score-based-tests.Rmd | 12 semtree-0.9.19/semtree/inst/doc/score-based-tests.html | 528 +++-- semtree-0.9.19/semtree/inst/doc/semforest-focus.R | 14 semtree-0.9.19/semtree/inst/doc/semforest-focus.Rmd | 23 semtree-0.9.19/semtree/inst/doc/semforest-focus.html | 574 +++--- semtree-0.9.19/semtree/man/getParDiffForest.Rd |only semtree-0.9.19/semtree/man/getParDiffTree.Rd |only semtree-0.9.19/semtree/man/plotParDiffForest.Rd |only semtree-0.9.19/semtree/man/plotParDiffTree.Rd |only semtree-0.9.19/semtree/man/plotTreeStructure.Rd |only semtree-0.9.19/semtree/man/semforest.control.Rd | 1 semtree-0.9.19/semtree/man/semtree-package.Rd |only semtree-0.9.19/semtree/man/semtree.control.Rd | 32 semtree-0.9.19/semtree/man/toTable.Rd | 4 semtree-0.9.19/semtree/tests/testthat/definitionvariable.R |only semtree-0.9.19/semtree/tests/testthat/prediction.R | 2 semtree-0.9.19/semtree/tests/testthat/scores.R | 4 semtree-0.9.19/semtree/tests/testthat/test-basic-splitting.R | 6 semtree-0.9.19/semtree/tests/testthat/test-compare_full_light.R | 3 semtree-0.9.19/semtree/tests/testthat/test-forest-focus.R |only semtree-0.9.19/semtree/tests/testthat/test-future.R |only semtree-0.9.19/semtree/tests/testthat/test-partial-dependence.R | 4 semtree-0.9.19/semtree/tests/testthat/test-score-forest.R |only semtree-0.9.19/semtree/tests/testthat/test-score-minN.R |only semtree-0.9.19/semtree/tests/testthat/test-score-tests.R | 10 semtree-0.9.19/semtree/tests/testthat/test-semforest-focus-bivariate-2.R |only semtree-0.9.19/semtree/tests/testthat/test-semforest-focus-bivariate-lavaan.R |only semtree-0.9.19/semtree/tests/testthat/test-semforest-focus-bivariate.R |only semtree-0.9.19/semtree/tests/testthat/test-splitting-unordered.R | 2 semtree-0.9.19/semtree/tests/testthat/test-vim.R |only semtree-0.9.19/semtree/tests/testthat/test-vim2.R |only semtree-0.9.19/semtree/tests/testthat/test.focus.R | 3 semtree-0.9.19/semtree/tests/testthat/test_boruta.R |only semtree-0.9.19/semtree/tests/testthat/testthat.R | 3 semtree-0.9.19/semtree/tests/vim.R | 3 semtree-0.9.19/semtree/vignettes/constraints.Rmd | 38 semtree-0.9.19/semtree/vignettes/forests.Rmd | 10 semtree-0.9.19/semtree/vignettes/getting-started.Rmd | 29 semtree-0.9.19/semtree/vignettes/score-based-tests.Rmd | 12 semtree-0.9.19/semtree/vignettes/semforest-focus.Rmd | 23 117 files changed, 3598 insertions(+), 2015 deletions(-)
Title: Easy Access to Model Information for Various Model Objects
Description: A tool to provide an easy, intuitive and consistent
access to information contained in various R models, like model
formulas, model terms, information about random effects, data that was
used to fit the model or data from response variables. 'insight'
mainly revolves around two types of functions: Functions that find
(the names of) information, starting with 'find_', and functions that
get the underlying data, starting with 'get_'. The package has a
consistent syntax and works with many different model objects, where
otherwise functions to access these information are missing.
Author: Daniel Luedecke [aut, cre] ,
Dominique Makowski [aut, ctb] ,
Indrajeet Patil [aut, ctb] ,
Philip Waggoner [aut, ctb] ,
Mattan S. Ben-Shachar [aut, ctb]
,
Brenton M. Wiernik [aut, ctb] ,
Vincent Arel-Bundock [aut, ctb]
,
Etienne Bacher [aut, ctb] ,
Ale [...truncated...]
Maintainer: Daniel Luedecke <d.luedecke@uke.de>
Diff between insight versions 0.19.6 dated 2023-10-12 and 0.19.7 dated 2023-11-26
DESCRIPTION | 33 +- MD5 | 74 ++--- NAMESPACE | 3 NEWS.md | 30 ++ R/clean_names.R | 2 R/color_if.R | 2 R/find_formula.R | 14 R/find_predictors.R | 41 ++ R/find_random.R | 10 R/find_statistic.R | 4 R/format_value.R | 10 R/get_data.R | 6 R/get_parameters_others.R | 28 + R/get_statistic.R | 29 +- R/get_varcov.R | 21 + R/helper_functions.R | 38 ++ R/is_model.R | 2 R/model_info.R | 7 R/n_obs.R | 8 R/utils_model_info.R | 7 build/partial.rdb |binary build/vignette.rds |binary inst/doc/display.html | 214 +++++++------- inst/doc/export.html | 2 inst/doc/insight.html | 2 man/color_if.Rd | 2 tests/testthat/_snaps/mipo.md | 52 +-- tests/testthat/_snaps/windows/format_table.md | 28 - tests/testthat/test-backticks.R | 220 +++++++-------- tests/testthat/test-brms_gr_random_effects.R |only tests/testthat/test-coxme.R | 375 ++++++++++++-------------- tests/testthat/test-coxph.R | 86 +++-- tests/testthat/test-fixest.R | 55 +-- tests/testthat/test-gamlss.R | 26 + tests/testthat/test-ggeffects.R |only tests/testthat/test-glmmTMB.R | 17 + tests/testthat/test-model_info.R | 22 + tests/testthat/test-plm.R | 44 +-- tests/testthat/test-survfit.R | 37 +- 39 files changed, 896 insertions(+), 655 deletions(-)
Title: Easier Cluster Computing (Based on 'snow')
Description: Usability wrapper around snow for easier development of
parallel R programs. This package offers e.g. extended error
checks, and additional functions. All functions work in
sequential mode, too, if no cluster is present or wished.
Package is also designed as connector to the cluster management
tool sfCluster, but can also used without it.
Author: Jochen Knaus
Maintainer: Jochen Knaus <jo@imbi.uni-freiburg.de>
Diff between snowfall versions 1.84-6.2 dated 2022-07-05 and 1.84-6.3 dated 2023-11-26
DESCRIPTION | 9 +++++---- MD5 | 12 ++++++------ R/init.R | 6 +++--- R/sysdata.rda |binary build/vignette.rds |binary data/test.rda |binary inst/doc/snowfall.pdf |binary 7 files changed, 14 insertions(+), 13 deletions(-)
Title: Measuring Functional Diversity (FD) from Multiple Traits, and
Other Tools for Functional Ecology
Description: Computes different multidimensional FD indices. Implements a distance-based framework to measure FD that allows any number and type of functional traits, and can also consider species relative abundances. Also contains other useful tools for functional ecology.
Author: Etienne Laliberte, Pierre Legendre, Bill Shipley
Maintainer: Etienne Laliberte <etiennelaliberte@gmail.com>
Diff between FD versions 1.0-12.2 dated 2023-11-17 and 1.0-12.3 dated 2023-11-26
DESCRIPTION | 12 ++++++------ MD5 | 26 +++++++++++++------------- inst/CITATION | 8 ++++---- man/FD-package.Rd | 13 ++++++------- man/dbFD.Rd | 23 +++++++++++------------ man/dummy.Rd | 3 +-- man/fdisp.Rd | 15 +++++++-------- man/functcomp.Rd | 5 ++--- man/gowdis.Rd | 3 +-- man/mahaldis.Rd | 3 +-- man/maxent.Rd | 7 +++---- man/maxent.test.Rd | 5 ++--- man/simul.dbFD.Rd | 5 ++--- man/tussock.Rd | 5 ++--- 14 files changed, 61 insertions(+), 72 deletions(-)
Title: Nonlinear Regression Discontinuity Design
Description: Estimation of the possibly nonlinear and non separable structural function in regression discontinuity designs with a continuous treatment variable. The method is based on Xie (2022) <arXiv:2204.08168>.
Author: Haitian Xie [aut, cre, cph]
Maintainer: Haitian Xie <xht@gsm.pku.edu.cn>
Diff between NonlinearRDD versions 0.0.3 dated 2023-10-27 and 0.0.4 dated 2023-11-26
DESCRIPTION | 6 +++--- MD5 | 6 ++++-- NAMESPACE | 1 + R/nrdse.R |only man/nrdse.Rd |only 5 files changed, 8 insertions(+), 5 deletions(-)
Title: Functions for Common Chart Types
Description: Wrapper for the 'ggplot2' package that creates a variety of common
charts (e.g. bar, line, area, ROC, waterfall, pie) while aiming to reduce
typing.
Author: Wojtek Kostelecki
Maintainer: Wojtek Kostelecki <wojtek.kostelecki@gmail.com>
Diff between ezplot versions 0.7.10 dated 2023-10-20 and 0.7.11 dated 2023-11-26
DESCRIPTION | 6 +++--- MD5 | 16 ++++++++-------- NEWS.md | 3 +++ R/bar_plot.R | 9 +++++---- R/line_plot.R | 4 ++-- build/vignette.rds |binary inst/doc/basics.html | 6 +++--- inst/doc/overview.html | 2 +- man/bar_plot.Rd | 3 ++- 9 files changed, 27 insertions(+), 22 deletions(-)
Title: Removing Allometric Effects of Body Size in Morphological
Analysis
Description: Implementation of the technique of Lleonart et al.
(2000) <doi:10.1006/jtbi.2000.2043> to scale body measurements
that exhibit an allometric growth. This procedure is a theoretical
generalization of the technique used by Thorpe
(1975) <doi:10.1111/j.1095-8312.1975.tb00732.x> and
Thorpe (1976) <doi:10.1111/j.1469-185X.1976.tb01063.x>.
Author: Saemi Schaer [aut, cre, cph]
Maintainer: Saemi Schaer <saemi.schaer@gmail.com>
Diff between allomr versions 0.2.0 dated 2023-02-18 and 0.3.0 dated 2023-11-26
DESCRIPTION | 6 +++--- MD5 | 6 +++--- R/allomr.R | 27 +++++++++++++++++++++++++++ man/allomr.Rd | 33 ++++++++++++++++++++++++++++++--- 4 files changed, 63 insertions(+), 9 deletions(-)
Title: The Generalized Hyperbolic Distribution
Description: Functions for the hyperbolic and related distributions.
Density, distribution and quantile functions and random number generation
are provided for the hyperbolic distribution, the generalized hyperbolic
distribution, the generalized inverse Gaussian distribution and
the skew-Laplace distribution. Additional functionality is
provided for the hyperbolic distribution, normal inverse
Gaussian distribution and generalized inverse Gaussian distribution,
including fitting of these distributions to data. Linear models with
hyperbolic errors may be fitted using hyperblmFit.
Author: David Scott <d.scott@auckland.ac.nz>
Maintainer: David Scott <d.scott@auckland.ac.nz>
Diff between GeneralizedHyperbolic versions 0.8-4 dated 2018-05-15 and 0.8-6 dated 2023-11-26
GeneralizedHyperbolic-0.8-4/GeneralizedHyperbolic/NEWS |only GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/ChangeLog | 29 +++ GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/DESCRIPTION | 10 - GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/MD5 | 81 ++++------ GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/R/hyperbFit.R | 16 - GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/R/hyperbFitStand.R | 12 - GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/R/hyperbFitStart.R | 2 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/R/hyperblmFit.R | 8 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/R/nigFitStart.R | 2 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/R/summary.gigFit.R | 4 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/R/summary.hyperbFit.R | 4 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/R/summary.hyperblm.R | 6 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/R/summary.nigFit.R | 4 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/GeneralizedHyperbolicDistribution.Rd | 8 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/RLambda.Rd | 6 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/SandP500.Rd | 5 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/dghyp.Rd | 4 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/dgig.Rd | 4 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/dhyperb.Rd | 6 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/dnig.Rd | 4 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/ghypCalcRange.Rd | 2 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/ghypChangePars.Rd | 2 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/ghypMom.Rd | 4 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/gigCalcRange.Rd | 2 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/gigChangePars.Rd | 4 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/gigFit.Rd | 6 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/gigFitStart.Rd | 2 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/hyperbCalcRange.Rd | 2 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/hyperbChangePars.Rd | 4 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/hyperbCvMTest.Rd | 10 - GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/hyperbFit.Rd | 4 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/hyperbFitStart.Rd | 6 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/hyperbMeanVarMode.Rd | 8 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/hyperbWSqTable.Rd | 4 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/hyperblm.Rd | 4 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/momRecursion.Rd | 6 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/nervePulse.Rd | 2 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/nigCalcRange.Rd | 2 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/nigFit.Rd | 4 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/nigFitStart.Rd | 6 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/plotShapeTriangle.Rd | 4 GeneralizedHyperbolic-0.8-6/GeneralizedHyperbolic/man/traffic.Rd | 2 42 files changed, 164 insertions(+), 141 deletions(-)
More information about GeneralizedHyperbolic at CRAN
Permanent link
Title: Create Tables from Different Types of Regression
Description: Create regression tables from generalized linear model(GLM), generalized estimating equation(GEE), generalized linear mixed-effects model(GLMM), Cox proportional hazards model, survey-weighted generalized linear model(svyglm) and survey-weighted Cox model results for publication.
Author: Jinseob Kim [aut, cre] ,
Zarathu [cph, fnd]
Maintainer: Jinseob Kim <jinseob2kim@gmail.com>
Diff between jstable versions 1.1.2 dated 2023-10-18 and 1.1.3 dated 2023-11-26
DESCRIPTION | 8 MD5 | 42 ++--- NEWS.md | 4 R/CreateTableOneJS.R | 30 ++- R/label.R | 366 +++++++++++++++++++++++---------------------- R/svyCreateTableOneJS.R | 30 ++- R/svycox.R | 11 - inst/doc/jstable.html | 30 +-- man/CreateTableOne2.Rd | 5 man/CreateTableOneJS.Rd | 5 man/LabelepiDisplay.Rd | 8 man/LabeljsCox.Rd | 13 - man/LabeljsGeeglm.Rd | 17 +- man/LabeljsMetric.Rd | 14 - man/LabeljsMixed.Rd | 10 - man/LabeljsRanef.Rd | 12 - man/LabeljsTable.Rd | 10 - man/mk.lev.Rd | 2 man/mk.lev.var.Rd | 4 man/svyCreateTableOne2.Rd | 5 man/svyCreateTableOneJS.Rd | 5 man/svycox.display.Rd | 11 - 22 files changed, 359 insertions(+), 283 deletions(-)
Title: The Hyperbolic Distribution
Description: Maintenance has been discontinued for this package. It has been
superseded by 'GeneralizedHyperbolic'. 'GeneralizedHyperbolic'
includes all the functionality of 'HyperbolicDist' and more
and is based on a more rational design. 'HyperbolicDist'
provides functions for the hyperbolic and related
distributions. Density, distribution and quantile functions
and random number generation are provided for the hyperbolic
distribution, the generalized hyperbolic distribution,
the generalized inverse Gaussian distribution and the
skew-Laplace distribution. Additional functionality is
provided for the hyperbolic distribution, including
fitting of the hyperbolic to data.
Author: David Scott <d.scott@auckland.ac.nz>
Maintainer: David Scott <d.scott@auckland.ac.nz>
Diff between HyperbolicDist versions 0.6-4 dated 2022-02-21 and 0.6-5 dated 2023-11-26
ChangeLog | 15 +++++++++++- DESCRIPTION | 10 ++++---- MD5 | 50 +++++++++++++++++++++--------------------- R/hyperbFit.R | 4 +-- R/summary.hyperbFit.R | 4 +-- data/hyperbWSqTable.rda |binary man/HyperbolicDistribution.Rd | 6 ++--- man/RLambda.Rd | 4 +-- man/SandP500.Rd | 4 +-- man/dghyp.Rd | 6 ++--- man/dgig.Rd | 4 +-- man/dhyperb.Rd | 6 ++--- man/ghypCalcRange.Rd | 2 - man/ghypChangePars.Rd | 2 - man/ghypMom.Rd | 4 +-- man/gigCalcRange.Rd | 2 - man/gigChangePars.Rd | 4 +-- man/hyperbCalcRange.Rd | 2 - man/hyperbChangePars.Rd | 4 +-- man/hyperbCvMTest.Rd | 10 ++++---- man/hyperbFit.Rd | 4 +-- man/hyperbFitStart.Rd | 6 ++--- man/hyperbMeanVarMode.Rd | 8 +++--- man/hyperbWSqTable.Rd | 2 - man/logHist.Rd | 2 - man/momRecursion.Rd | 6 ++--- 26 files changed, 92 insertions(+), 79 deletions(-)
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