Title: Continuous-Lag Spatial Markov Chains
Description: A set of functions is provided for 1) the stratum lengths analysis along a chosen direction, 2) fast estimation of continuous lag spatial Markov chains model parameters and probability computing (also for large data sets), 3) transition probability maps and transiograms drawing, 4) simulation methods for categorical random fields. More details on the methodology are discussed in Sartore (2013) <doi:10.32614/RJ-2013-022> and Sartore et al. (2016) <doi:10.1016/j.cageo.2016.06.001>.
Author: Luca Sartore [aut, cre]
Maintainer: Luca Sartore <drwolf85@gmail.com>
Diff between spMC versions 0.3.15 dated 2023-05-03 and 0.3.16 dated 2026-09-05
DESCRIPTION | 21 +++++++++++---------- MD5 | 18 +++++++++--------- NEWS.md | 9 +++++++++ README.md | 3 ++- man/quench.Rd | 2 +- man/sim.Rd | 2 +- man/sim_ck.Rd | 2 +- man/sim_ik.Rd | 2 +- man/spMC-package.Rd | 7 ++++--- src/spMC.c | 2 +- 10 files changed, 40 insertions(+), 28 deletions(-)
Title: Download Administrative Boundary Data from 'geoBoundaries'
Description: Provides tools to download individual country boundaries and
global composite boundaries from 'geoBoundaries'
<https://www.geoboundaries.org/> across multiple administrative
('ADM') levels. Returns boundaries as 'sf' objects for mapping and
spatial analysis. Runfola et al. (2020)
<doi:10.1371/journal.pone.0231866> describe the underlying database.
Author: Diego Hernangomez [aut, cre, cph] ,
William & Mary geoLab [dtc]
Maintainer: Diego Hernangomez <diego.hernangomezherrero@gmail.com>
Diff between geobounds versions 1.0.0 dated 2026-07-08 and 1.0.1 dated 2026-09-05
geobounds-1.0.0/geobounds/tests/testthat/_snaps/gb-get-metadata.md |only geobounds-1.0.1/geobounds/DESCRIPTION | 14 geobounds-1.0.1/geobounds/MD5 | 73 +- geobounds-1.0.1/geobounds/NEWS.md | 50 - geobounds-1.0.1/geobounds/R/gb-cache.R | 249 +++++-- geobounds-1.0.1/geobounds/R/gb-get-adm.R | 29 geobounds-1.0.1/geobounds/R/gb-get-max-lvl.R | 45 + geobounds-1.0.1/geobounds/R/gb-get-metadata.R | 8 geobounds-1.0.1/geobounds/R/gb-get-world.R | 39 - geobounds-1.0.1/geobounds/R/gb-get.R | 125 ++- geobounds-1.0.1/geobounds/R/geobounds-package.R | 2 geobounds-1.0.1/geobounds/R/utils.R | 125 ++- geobounds-1.0.1/geobounds/README.md | 19 geobounds-1.0.1/geobounds/inst/COPYRIGHTS | 8 geobounds-1.0.1/geobounds/inst/doc/geobounds.html | 47 - geobounds-1.0.1/geobounds/inst/doc/geobounds.qmd | 63 - geobounds-1.0.1/geobounds/inst/schemaorg.json | 26 geobounds-1.0.1/geobounds/man/chunks |only geobounds-1.0.1/geobounds/man/gb_clear_cache.Rd | 11 geobounds-1.0.1/geobounds/man/gb_get.Rd | 274 ++++---- geobounds-1.0.1/geobounds/man/gb_get_adm.Rd | 338 +++++----- geobounds-1.0.1/geobounds/man/gb_get_max_adm_lvl.Rd | 3 geobounds-1.0.1/geobounds/man/gb_get_metadata.Rd | 7 geobounds-1.0.1/geobounds/man/gb_get_world.Rd | 21 geobounds-1.0.1/geobounds/man/gb_set_cache_dir.Rd | 9 geobounds-1.0.1/geobounds/man/geobounds-package.Rd | 5 geobounds-1.0.1/geobounds/tests/testthat/_snaps/gb-get-world.md | 4 geobounds-1.0.1/geobounds/tests/testthat/_snaps/gb-get.md | 28 geobounds-1.0.1/geobounds/tests/testthat/_snaps/utils.md | 87 +- geobounds-1.0.1/geobounds/tests/testthat/helper-cache.R | 28 geobounds-1.0.1/geobounds/tests/testthat/helper-metadata.R |only geobounds-1.0.1/geobounds/tests/testthat/test-gb-cache.R | 280 ++++++-- geobounds-1.0.1/geobounds/tests/testthat/test-gb-get-adm.R | 208 ++---- geobounds-1.0.1/geobounds/tests/testthat/test-gb-get-max-lvl.R | 41 + geobounds-1.0.1/geobounds/tests/testthat/test-gb-get-metadata.R | 100 +- geobounds-1.0.1/geobounds/tests/testthat/test-gb-get-world.R | 48 + geobounds-1.0.1/geobounds/tests/testthat/test-gb-get.R | 251 ++++--- geobounds-1.0.1/geobounds/tests/testthat/test-utils.R | 222 +++++- geobounds-1.0.1/geobounds/vignettes/geobounds.qmd | 63 - 39 files changed, 1846 insertions(+), 1104 deletions(-)
Title: Continuous Optimization using Memetic Algorithms with Local
Search Chains (MA-LS-Chains)
Description: An implementation of an algorithm family for continuous
optimization called memetic algorithms with local search chains
(MA-LS-Chains), as proposed in Molina et al. (2010) <doi:10.1162/evco.2010.18.1.18102> and Molina et al. (2011) <doi:10.1007/s00500-010-0647-2>. Rmalschains is further discussed in Bergmeir et al. (2016) <doi:10.18637/jss.v075.i04>. Memetic algorithms are hybridizations of genetic
algorithms with local search methods. They are especially suited
for continuous optimization.
Author: Christoph Bergmeir [aut, cre, cph],
Jose M. Benitez [ths],
Daniel Molina [aut, cph],
Robert Davies [ctb, cph] ,
Dirk Eddelbuettel [ctb, cph] ,
Nikolaus Hansen [ctb, cph] ,
Richard J. Wagner [ctb, cph]
Maintainer: Christoph Bergmeir <c.bergmeir@decsai.ugr.es>
Diff between Rmalschains versions 0.2-11 dated 2026-01-29 and 0.2-12 dated 2026-09-05
ChangeLog | 5 +++++ DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ src/RmalschainsEvaluate.h | 2 +- src/RmalschainsWrapper.cpp | 2 +- src/domain.cc | 1 + src/simplex.cc | 1 + 7 files changed, 18 insertions(+), 11 deletions(-)
Title: Orchestrate Geospatial (Meta)Data Management Workflows and
Manage FAIR Services
Description: An engine to facilitate the orchestration and execution of metadata-driven data management workflows, in compliance with 'FAIR'
(Findable, Accessible, Interoperable and Reusable) data management principles. By means of a pivot metadata model, relying on the 'DublinCore' standard (<https://dublincore.org/>),
a unique source of metadata can be used to operate multiple and inter-connected data management actions. Users can also customise their own workflows by creating specific actions
but the library comes with a set of native actions targeting common geographic information and data management, in particular actions oriented to the publication on the web of metadata
and data resources to provide standard discovery and access services. At first, default actions of the library were meant to focus on providing turn-key actions for geospatial (meta)data:
1) by creating manage geospatial (meta)data complying with 'ISO/TC211' (<https://committee.iso.org/home/tc211>) and 'OGC' (< [...truncated...]
Author: Emmanuel Blondel [aut, cre, cph] ,
Julien, Barde [aut] ,
Wilfried Heintz [aut] ,
Alexandre Bennici [ctb],
Sylvain Poulain [ctb],
Bastien Grasset [ctb],
Mathias Rouan [ctb],
Emilie Lerigoleur [ctb],
Yvan Le Bras [ctb],
Jeroen Ooms [ctb]
Maintainer: Emmanuel Blondel <emmanuel.blondel1@gmail.com>
Diff between geoflow versions 1.3.0 dated 2026-06-21 and 1.4.0 dated 2026-09-05
DESCRIPTION | 10 MD5 | 118 - NEWS.md | 11 R/debugWorkflow.R | 16 R/executeWorkflow.R | 12 R/geoflow_data.R | 4 R/geoflow_entity.R | 15 R/geoflow_utils.R | 7 R/initWorkflow.R | 27 README.md | 2 inst/actions/geonapi_publish_iso_19139.R | 18 inst/metadata/dictionary/dictionary_handler_df.R | 2 man/debugWorkflow.Rd | 11 man/executeWorkflow.Rd | 7 man/geoflowLogger.Rd | 235 +-- man/geoflow_action.Rd | 370 ++--- man/geoflow_contact.Rd | 661 +++++---- man/geoflow_data.Rd | 1537 +++++++++++---------- man/geoflow_data_accessor.Rd | 301 ++-- man/geoflow_date.Rd | 118 - man/geoflow_dictionary.Rd | 264 ++- man/geoflow_dimension.Rd | 245 +-- man/geoflow_entity.Rd | 1612 ++++++++++++----------- man/geoflow_featuremember.Rd | 143 -- man/geoflow_featuretype.Rd | 186 +- man/geoflow_format.Rd | 198 +- man/geoflow_handler.Rd | 215 +-- man/geoflow_keyword.Rd | 137 + man/geoflow_kvp.Rd | 172 +- man/geoflow_process.Rd | 152 +- man/geoflow_profile.Rd | 275 ++- man/geoflow_provenance.Rd | 132 - man/geoflow_register.Rd | 142 +- man/geoflow_relation.Rd | 258 +-- man/geoflow_right.Rd | 137 + man/geoflow_skos_vocabulary.Rd | 383 ++--- man/geoflow_software.Rd | 480 +++--- man/geoflow_subject.Rd | 269 ++- man/geoflow_validator.Rd | 139 + man/geoflow_validator_cell.Rd | 296 ++-- man/geoflow_validator_contact_Identifier.Rd | 116 - man/geoflow_validator_contacts.Rd | 78 - man/geoflow_validator_entities.Rd | 78 - man/geoflow_validator_entity_Creator.Rd | 98 - man/geoflow_validator_entity_Data.Rd | 98 - man/geoflow_validator_entity_Date.Rd | 116 - man/geoflow_validator_entity_Description.Rd | 98 - man/geoflow_validator_entity_Format.Rd | 98 - man/geoflow_validator_entity_Identifier.Rd | 116 - man/geoflow_validator_entity_Language.Rd | 116 - man/geoflow_validator_entity_Provenance.Rd | 116 - man/geoflow_validator_entity_Relation.Rd | 98 - man/geoflow_validator_entity_Rights.Rd | 98 - man/geoflow_validator_entity_SpatialCoverage.Rd | 116 - man/geoflow_validator_entity_Subject.Rd | 116 - man/geoflow_validator_entity_TemporalCoverage.Rd | 116 - man/geoflow_validator_entity_Title.Rd | 98 - man/geoflow_validator_entity_Type.Rd | 98 - man/geoflow_vocabulary.Rd | 124 - man/initWorkflow.Rd | 7 60 files changed, 5872 insertions(+), 5444 deletions(-)
Title: Enhanced Office Open XML Charting for 'openxlsx2'
Description: Provides a high-level 'R6' interface for creating complex
Office Open XML (OOXML) charts. Allows users to build
multi-series combo charts with secondary axes and granular styling
options, designed to integrate seamlessly with 'openxlsx2'.
Author: Jan Marvin Garbuszus [aut, cre]
Maintainer: Jan Marvin Garbuszus <jan.garbuszus@ruhr-uni-bochum.de>
Diff between encharter versions 0.10 dated 2026-08-04 and 0.11 dated 2026-09-05
DESCRIPTION | 8 MD5 | 30 + NAMESPACE | 10 NEWS.md | 76 ++++ R/encharter.R | 96 +++++ R/encharter_chart.R | 365 +++++++++++++++++++--- R/encharter_chartex.R | 214 +++++++++++- R/utils.R | 19 + R/validate.R |only README.md | 2 inst/WORDLIST | 17 + inst/examples/Droplines_highlowlines_updownbars.R | 20 - inst/examples/New_chart_types.R |only inst/tools |only man/EncharterBase.Rd | 35 +- man/encharter.Rd | 295 +++++++++++++++++ tests/testthat/test-new_chart_types.R |only tests/testthat/test-validate.R |only 18 files changed, 1084 insertions(+), 103 deletions(-)
Title: Remedy for Violations of the Proportional Hazards Assumption in
Cox Proportional Hazards Models
Description: Remedying proportional hazards
assumption violations of a Cox proportional hazards model using
stepwise split-point and time-varying coefficient methods based on
Cox (1972) <doi:10.1111/j.2517-6161.1972.tb00899.x> and Klein
and Moeschberger (1997) <doi:10.1007/978-1-4757-2728-9>.
Author: Hamin Kim [aut, cre]
Maintainer: Hamin Kim <haaamin@korea.ac.kr>
Diff between cox.rvph versions 0.2.0 dated 2026-08-29 and 0.2.1 dated 2026-09-05
DESCRIPTION | 12 +++++++----- MD5 | 9 ++++++++- build |only inst/doc |only tests |only vignettes |only 6 files changed, 15 insertions(+), 6 deletions(-)
Title: Bayesian Knowledge Tracing Model
Description: Fitting, cross-validating, and predicting with Bayesian Knowledge Tracing (BKT) models. It is designed for analyzing educational datasets to trace student knowledge over time. The package includes functions for fitting BKT models, evaluating their performance using various metrics, and making predictions on new data. It provides functionality similar to the 'Python' package 'pyBKT' authored by Zachary A. Pardos (zp@berkeley.edu) at <https://github.com/CAHLR/pyBKT>.
Author: Yuhao Yuan [aut, cre],
Biying Zhou [aut],
Feng Ji [aut]
Maintainer: Yuhao Yuan <yuanyuhaoapply@163.com>
This is a re-admission after prior archival of version 0.1.0 dated 2025-02-05
Diff between BKT versions 0.1.0 dated 2025-02-05 and 0.1.2 dated 2026-09-05
BKT-0.1.0/BKT/NEWS.md |only BKT-0.1.2/BKT/DESCRIPTION | 12 BKT-0.1.2/BKT/MD5 | 54 BKT-0.1.2/BKT/NAMESPACE | 3 BKT-0.1.2/BKT/R/data.R |only BKT-0.1.2/BKT/R/fit-EM_fit.R | 131 - BKT-0.1.2/BKT/R/fit-predict_onestep.R | 14 BKT-0.1.2/BKT/R/models-Model.R | 88 - BKT-0.1.2/BKT/R/simulation.R |only BKT-0.1.2/BKT/R/util-convert_data.R | 196 +- BKT-0.1.2/BKT/R/util-save_load.R | 22 BKT-0.1.2/BKT/README.md | 936 +++---------- BKT-0.1.2/BKT/data |only BKT-0.1.2/BKT/man/crossvalidate.Rd | 7 BKT-0.1.2/BKT/man/evaluate.Rd | 9 BKT-0.1.2/BKT/man/fetch_dataset.Rd | 4 BKT-0.1.2/BKT/man/fit.Rd | 5 BKT-0.1.2/BKT/man/load_model.Rd | 11 BKT-0.1.2/BKT/man/params.Rd | 7 BKT-0.1.2/BKT/man/predict_bkt.Rd | 9 BKT-0.1.2/BKT/man/save_model.Rd | 11 BKT-0.1.2/BKT/man/set_coef.Rd | 13 BKT-0.1.2/BKT/man/simulate_bkt_data.Rd |only BKT-0.1.2/BKT/man/simulation_data_2000.Rd |only BKT-0.1.2/BKT/man/simulation_data_50.Rd |only BKT-0.1.2/BKT/man/simulation_data_500.Rd |only BKT-0.1.2/BKT/tests/testthat/helper-simulation-data.R |only BKT-0.1.2/BKT/tests/testthat/test-check-column-mapping.R |only BKT-0.1.2/BKT/tests/testthat/test-check-core-workflows.R |only BKT-0.1.2/BKT/tests/testthat/test-check-fixed-parameters.R |only BKT-0.1.2/BKT/tests/testthat/test-check-model-variants.R |only BKT-0.1.2/BKT/tests/testthat/test-usage_1.R | 15 BKT-0.1.2/BKT/tests/testthat/test-usage_2.R | 14 33 files changed, 591 insertions(+), 970 deletions(-)
Title: Download Data from the Wittgenstein Centre Human Capital Data
Explorer
Description: Download and plot education specific demographic data from the Wittgenstein Centre for Demography and Human Capital Data Explorer <https://dataexplorer.wittgensteincentre.org/>.
Author: Guy J. Abel [aut, cre, ctb] ,
Samir K.C. [ctb] ,
Michaela Potancokova [ctb],
Claudia Reiter [ctb] ,
Andrea Tamburini [ctb],
Dilek Yildiz [ctb]
Maintainer: Guy J. Abel <g.j.abel@gmail.com>
This is a re-admission after prior archival of version 0.0.8 dated 2026-02-25
Diff between wcde versions 0.0.8 dated 2026-02-25 and 0.0.8.1 dated 2026-09-05
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- NEWS.md | 5 +++++ build/vignette.rds |binary inst/doc/wcde.R | 4 ++-- inst/doc/wcde.Rmd | 6 +++--- inst/doc/wcde.html | 34 +++++++++++++++++----------------- vignettes/wcde.Rmd | 6 +++--- 8 files changed, 41 insertions(+), 36 deletions(-)
Title: R Interface to 'FOAAS'
Description: R access to the 'FOAAS' (F... Off As A Service) web service is provided.
Author: Dirk Eddelbuettel [aut, cre]
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between rfoaas versions 2.3.3 dated 2026-02-04 and 2.4.0 dated 2026-09-05
ChangeLog | 26 ++ DESCRIPTION | 8 MD5 | 12 - R/foaas.R | 305 +++++++++++++++++----------------- README.md | 20 -- man/rfoaas-package.Rd | 381 +++++++++++++++++++++---------------------- tests/runTestsAgainstFOAAS.R | 239 +++++++++++++------------- 7 files changed, 504 insertions(+), 487 deletions(-)
Title: Bindings for 'Open Source Routing Machine'
Description: Install and control 'Open Source Routing Machine' ('OSRM')
backend executables to prepare routing data and run/stop a local
'OSRM' server. For computations with the running server use the 'osrm'
package for 'R' (<https://cran.r-project.org/package=osrm>).
Author: Egor Kotov [aut, cre, cph]
Maintainer: Egor Kotov <kotov.egor@gmail.com>
Diff between osrm.backend versions 0.4.0 dated 2026-07-11 and 0.4.1 dated 2026-09-05
DESCRIPTION | 8 MD5 | 18 - NEWS.md | 19 + R/osrm_install.R | 491 ++++++++++++++++++++++++--------- README.md | 6 inst/doc/osrm-backend.html | 41 +- man/osrm_install.Rd | 14 tests/testthat/test-osrm_install.R | 264 +++++++++++++++-- tests/testthat/test-osrm_server.R | 4 vignettes/generated-tested-versions.md | 6 10 files changed, 659 insertions(+), 212 deletions(-)
Title: Metabolic Pathway Completeness and Abundance Calculation
Description: Provides tools for analyzing metabolic pathway completeness, abundance, and transcripts
using KEGG Orthology (KO) data from (meta)genomic and (meta)transcriptomic studies.
Supports both completeness (presence/absence) and abundance-weighted analyses.
Includes built-in KEGG reference datasets. For more details see Li et al. (2023) <doi:10.1038/s41467-023-42193-7>.
Author: Liuyang Li [aut, cre]
Maintainer: Liuyang Li <cyanobacteria@yeah.net>
Diff between mclink versions 1.1.2 dated 2026-07-20 and 1.3.1 dated 2026-09-05
ChangeLog | 27 ++++-- DESCRIPTION | 10 +- MD5 | 49 +++++------ NAMESPACE | 2 R/convert_abundance_to_presence.R | 25 +++-- R/data.R | 4 R/group_ko_by_module.R | 89 ++++++++++++-------- R/matrix_core.R |only R/mclink.R | 54 +++++++++--- R/merge_module_name.R | 22 ++--- R/process_all_modules.R | 164 +++++++++++++++++++++++++++----------- R/process_module_brackets.R | 3 R/process_module_loop_comma.R | 9 +- R/process_module_loop_plu_comma.R | 9 +- R/process_module_loop_plus.R | 9 +- R/process_module_structure.R | 31 ++++--- R/process_step_comma.R | 29 ++---- R/process_step_direct.R | 22 ++--- R/process_step_plus.R | 30 +++--- R/process_step_space.R | 26 ++---- R/read_and_process_KO_table.R | 4 README.md | 3 data/KO_pathway_ref.rda |binary man/KO_pathway_ref.Rd | 6 + man/mclink.Rd | 7 + man/process_all_modules.Rd | 8 + 26 files changed, 394 insertions(+), 248 deletions(-)
Title: Processing, Visualizing, and Labeling Americas Barometer Data
Description: Labeling, weighting, and plotting data following custom style guidelines for use in reports, presentations, and social media posts. The Center for Global Democracy (formerly the Latin American Public Opinion Project) at Vanderbilt University is a leader in public survey research, best known for the Americas Barometer project. The publicly available data can be downloaded from: <https://www.vanderbilt.edu/cgd/data-access/>.
Author: Robert Vidigal [cre, aut] ,
Luke Plutowski [ctb, aut]
Maintainer: Robert Vidigal <centerforglobaldemocracy@vanderbilt.edu>
This is a re-admission after prior archival of version 2.1.7 dated 2026-08-04
Diff between lapop versions 2.1.7 dated 2026-08-04 and 2.2 dated 2026-09-05
DESCRIPTION | 16 +++++++------- MD5 | 28 ++++++++++++------------ NEWS.md | 9 +++++++ R/lapop_cc.R | 5 ++-- R/lapop_ccm.R | 8 +++++-- R/lapop_hist.R | 43 ++++++++++++++++++++------------------ R/lapop_stack.R | 20 +++++++++-------- R/lpr_stack.R | 20 +++++++++++------ inst/cran_preflight.R | 2 - inst/doc/lapop-visualization.Rmd | 2 - inst/doc/lapop-visualization.html | 4 +-- man/lapop_ccm.Rd | 6 ++++- man/lapop_hist.Rd | 5 +++- man/lapop_stack.Rd | 3 +- vignettes/lapop-visualization.Rmd | 2 - 15 files changed, 103 insertions(+), 70 deletions(-)
Title: Calculation of Comorbidity and Frailty Scores
Description: Computes comorbidity indices and combined frailty scores for multiple ICD coding systems, including ICD-10-CA, ICD-10-CM, and ICD-11. The package provides tools to preprocess episode data, map diagnosis codes to chronic categories, propagate conditions across episodes, and generate comorbidity and frailty measures. The methods implemented are original to this package and were developed by the authors for research applications; a manuscript describing the methodology is currently in preparation.
Author: Azadeh Bayani [aut, cre] ,
Jean Noel Nikiema [ctb],
Michele Bally [ctb]
Maintainer: Azadeh Bayani <azadeh.bayani@umontreal.ca>
This is a re-admission after prior archival of version 1.0.2 dated 2026-03-26
Diff between LABTNSCPSS versions 1.0.2 dated 2026-03-26 and 1.0.3 dated 2026-09-05
LABTNSCPSS-1.0.2/LABTNSCPSS/R/setup_package.R |only LABTNSCPSS-1.0.3/LABTNSCPSS/DESCRIPTION | 6 +++--- LABTNSCPSS-1.0.3/LABTNSCPSS/MD5 | 3 +-- 3 files changed, 4 insertions(+), 5 deletions(-)
Title: A User-Oriented Statistical Toolkit for Analytical Variance
Estimation
Description: Provides a toolkit for analytical variance estimation in survey sampling. Apart from the implementation of standard variance estimators, its main feature is to help the sampling expert produce easy-to-use variance estimation "wrappers", where systematic operations (linearization, domain estimation) are handled in a consistent and transparent way.
Author: Martin Chevalier [aut] ,
Khaled Larbi [aut],
Jean Rubin [cre],
Institut national de la statistique et des etudes economiques [cph]
Maintainer: Jean Rubin <jean.rubin@insee.fr>
Diff between gustave versions 1.0.0 dated 2023-11-17 and 1.0.1 dated 2026-09-05
DESCRIPTION | 16 +++++++++------- MD5 | 4 ++-- NEWS.md | 3 +++ 3 files changed, 14 insertions(+), 9 deletions(-)
Title: Panels and Interactive Versions of Diagnostic Plots using
'ggplot2'
Description: An R package for creating diagnostic plots for models. The package allows for the
creation of panels of plots and interactive plots.
Author: Katherine Goode [aut, cre],
Kathleen Rey [aut],
Greenwood Mark [aut]
Maintainer: Katherine Goode <katherine.j.goode@gmail.com>
This is a re-admission after prior archival of version 0.3.0 dated 2019-05-31
Diff between ggResidpanel versions 0.3.0 dated 2019-05-31 and 0.4.0 dated 2026-09-05
ggResidpanel |only 1 file changed
Title: Clustering of Datasets
Description: Hierarchical and partitioning algorithms to cluster blocks of variables. The partitioning algorithm includes an option called noise cluster to set aside atypical blocks of variables. Different thresholds per cluster can be sets. The CLUSTATIS method (for quantitative blocks) (Llobell, Cariou, Vigneau, Labenne & Qannari (2020) <doi:10.1016/j.foodqual.2018.05.013>, Llobell, Vigneau & Qannari (2019) <doi:10.1016/j.foodqual.2019.02.017>) and the CLUSCATA method (for Check-All-That-Apply data) (Llobell, Cariou, Vigneau, Labenne & Qannari (2019) <doi:10.1016/j.foodqual.2018.09.006>, Llobell, Giacalone, Labenne & Qannari (2019) <doi:10.1016/j.foodqual.2019.05.017>) are the core of this package. The CATATIS methods allows to compute some indices and tests to control the quality of CATA data (Llobell, Bonnet & Giacalone (2024) <doi:10.1111/joss.12941>) . Multivariate analysis and clustering of subjects for quantitative multiblock data, CATA, RA [...truncated...]
Author: Fabien Llobell [aut, cre] ,
Evelyne Vigneau [ctb] ,
Veronique Cariou [ctb] ,
El Mostafa Qannari [ctb]
Maintainer: Fabien Llobell <fabienllobellresearch@gmail.com>
Diff between ClustBlock versions 6.0.0 dated 2026-06-04 and 6.1.0 dated 2026-09-05
DESCRIPTION | 14 +++++++------- MD5 | 19 ++++++++++++------- NAMESPACE | 1 + NEWS | 5 +++-- R/catatis.R | 3 ++- R/croissant.R |only R/preprocess_JAR_liking.R |only data/croissant.rda |only inst/CITATION | 4 ++-- man/ClustBlock-package.Rd | 6 ++++-- man/catatis.Rd | 3 ++- man/croissant.Rd |only man/preprocess_JAR_liking.Rd |only 13 files changed, 33 insertions(+), 22 deletions(-)
Title: Differential Item Functioning for AI-Scored Assessments
Description: Detects and quantifies differential item functioning (DIF) in
AI-scored educational and psychological assessments. Provides a fully
self-contained robust DIF engine (M-estimation via iteratively
re-weighted least squares with the bi-square loss) alongside the
Differential AI Scoring Bias (DASB) test, which detects item-level
scoring shifts that differ across subgroups when comparing human and AI
scoring conditions. Supports independent and paired scoring designs,
robust linking of the cross-condition contrast, multiplicity control,
conversion of fitted 'mirt' models to package inputs, simulation
utilities, anchor weight diagnostics, and an AI-effect classification
framework. Methods follow Halpin (2024) <doi:10.1007/s11336-024-09957-6>.
Author: Subir Hait [aut, cre]
Maintainer: Subir Hait <haitsubi@msu.edu>
Diff between aiDIF versions 0.1.0 dated 2026-04-21 and 0.2.0 dated 2026-09-05
DESCRIPTION | 21 - MD5 | 53 +- NAMESPACE | 59 +- NEWS.md |only R/adapters.R |only R/aidif_core.R | 95 +++- R/class_functions.R | 606 ++++++++++++++++------------- R/robust_engine.R | 892 ++++++++++++++++++++++--------------------- R/scoring_bias.R | 747 ++++++++++++++++++++++++------------ R/validate_inputs.R | 214 ++++++++-- README.md | 275 ++++--------- build/vignette.rds |binary inst/CITATION |only inst/doc/introduction.R | 118 ++++- inst/doc/introduction.Rmd | 324 ++++++++++++--- inst/doc/introduction.html | 636 ++++++++++++++++++++---------- man/ai_effect_summary.Rd | 55 +- man/anchor_weights.Rd | 13 man/as_aidif.Rd |only man/estimate_robust_scale.Rd | 2 man/fit_aidif.Rd | 45 +- man/plot.aidif.Rd | 13 man/print.aidif.Rd | 6 man/print.summary.aidif.Rd |only man/rho_curve.Rd |only man/scoring_bias_test.Rd | 143 +++++- man/summary.aidif.Rd | 23 - tests/testthat.R | 2 tests/testthat/test-aidif.R | 457 +++++++++++++++------- vignettes/aidif.bib |only vignettes/introduction.Rmd | 324 ++++++++++++--- 31 files changed, 3308 insertions(+), 1815 deletions(-)
Title: 3D Plotting with 'ggplot2'
Description: A 'ggplot2' extension for creating 3D figures.
Provides 3D geoms, stats, and a coord_3d() coordinate
system supporting rotation, perspective, and lighting.
Author: Matthew Kling [aut, cre, cph]
Maintainer: Matthew Kling <mattkling@berkeley.edu>
Diff between ggcube versions 0.2.0 dated 2026-07-21 and 0.3.0 dated 2026-09-05
DESCRIPTION | 10 MD5 | 136 ++-- NAMESPACE | 3 NEWS.md | 19 R/animate-3d.R | 19 R/coord-3d.R | 293 +++++++-- R/edge-selection.R | 190 +++++- R/geom-hull-3d.R | 341 ++++++++--- R/geom-path-3d.R | 4 R/geom-point-3d.R | 7 R/geom-polygon-3d.R | 2 R/geom-segment-3d.R | 6 R/geom-text-3d.R | 17 R/guide_3d.R | 19 R/label-rendering.R | 944 ++++++++++++++++++++----------- R/light.R | 185 ++++-- R/orbit-3d.R | 3 R/panel-rendering.R | 55 - R/render-mixed.R | 58 + R/scale-z.R | 2 R/shared-docs.R | 36 - R/theme.R | 30 R/utils.R | 36 + R/zzz.R | 9 README.md | 30 inst/doc/ggcube.R | 14 inst/doc/ggcube.Rmd | 21 inst/doc/ggcube.html | 48 - man/coord_3d.Rd | 36 - man/cube_theming.Rd | 36 + man/depth_params.Rd |only man/figures/README-anim-1.gif |binary man/figures/README-bar-1.png |binary man/figures/README-functions-1.png |binary man/figures/README-lighting-1.png |binary man/figures/README-paths-1.png |binary man/figures/README-points-1.png |binary man/figures/README-position-1.png |binary man/figures/README-quickstart-1.png |binary man/figures/README-rotation-1.png |binary man/figures/README-smooth-1.png |binary man/figures/README-surfaces-1.png |binary man/figures/README-text-1.png |binary man/geom_bar_3d.Rd | 18 man/geom_col_3d.Rd | 18 man/geom_contour_3d.Rd | 18 man/geom_hull_3d.Rd | 80 +- man/geom_path_3d.Rd | 9 man/geom_point_3d.Rd | 10 man/geom_polygon_3d.Rd | 18 man/geom_ridgeline_3d.Rd | 18 man/geom_segment_3d.Rd | 9 man/geom_smooth_3d.Rd | 18 man/geom_text_3d.Rd | 16 man/geom_voxel_3d.Rd | 18 man/light.Rd | 60 - man/light_param.Rd | 9 man/makeContent.ggcube_axis_furniture.Rd |only man/polygon_params.Rd | 9 man/stat_density_3d.Rd | 18 man/stat_distributions_3d.Rd | 18 man/stat_function_3d.Rd | 9 man/stat_identity_3d.Rd | 9 man/stat_surface_3d.Rd | 18 tests/testthat/Rplots.pdf |binary tests/testthat/test-coord-3d.R | 45 + tests/testthat/test-depth-scaling.R |only tests/testthat/test-edge-externality.R |only tests/testthat/test-label-rendering.R | 260 +++++++- tests/testthat/test-light.R | 358 +++++++++++ vignettes/ggcube.Rmd | 21 71 files changed, 2781 insertions(+), 912 deletions(-)
Title: An Interface to Brazilian Public Health Data
Description: Retrieves public health data from the Department of Informatics
('DATASUS') of the Brazilian Unified Health System ('Sistema Unico de
Saude', 'SUS') through its online tabulation service and open-data catalog.
It covers the Mortality Information System ('SIM'), Live Birth Information
System ('SINASC'), Hospital Information System of the Unified Health System
('SIH/SUS'), Outpatient Information System of the Unified Health System
('SIA/SUS'), National Register of Health Establishments ('CNES'),
Notifiable Diseases Information System ('SINAN'), National Immunization
Program ('PNI'), Cancer Information System ('SISCAN'), and Food and
Nutrition Surveillance System ('SISVAN'). Contemporary sources from the
'OpenDataSUS' portal include Events Supposedly Attributable to Vaccination
or Immunization ('ESAVI'), influenza-like illness notifications from
'e-SUS Notifica', individual vaccination doses, coronavirus disease 2019
(COVID-19) hospital occupancy, and record-level mortality, live-birth an [...truncated...]
Author: Renato Prado Siqueira [aut, cre]
Maintainer: Renato Prado Siqueira <rpradosiqueira@gmail.com>
This is a re-admission after prior archival of version 0.4.1.1 dated 2019-06-09
Diff between datasus versions 0.4.1.1 dated 2019-06-09 and 0.16.1 dated 2026-09-05
DESCRIPTION | 49 - MD5 | 177 +++-- NAMESPACE | 60 + NEWS.md | 180 +++++ R/analytics.R |only R/contemporary-data.R |only R/datasus-package.R |only R/efficient-reading.R |only R/geography.R |only R/health-services.R |only R/indicators.R |only R/microdata.R |only R/opendatasus.R |only R/sim_evita10_bruf.R | 514 +------------- R/sim_evita10_mun.R | 735 ++------------------ R/sim_evita10_uf.R | 592 +--------------- R/sim_evitb10_bruf.R | 549 +-------------- R/sim_evitb10_mun.R | 769 ++------------------- R/sim_evitb10_uf.R | 621 +---------------- R/sim_inf10_bruf.R | 901 ++----------------------- R/sim_inf10_mun.R | 1112 ++----------------------------- R/sim_inf10_uf.R | 938 ++------------------------ R/sim_obt10_bruf.R | 648 +----------------- R/sim_obt10_mun.R | 873 ++---------------------- R/sim_obt10_uf.R | 728 ++------------------ R/sinasc_nv_bruf.R | 692 +------------------ R/sinasc_nv_mun.R | 918 ++------------------------ R/sinasc_nv_uf.R | 653 ------------------ R/sysdata.rda |only R/tabnet-client.R |only R/vital-statistics.R |only README.md | 419 ++++++++++- build/vignette.rds |binary inst/doc/Introduction_to_datasus.R | 254 +++++-- inst/doc/Introduction_to_datasus.Rmd | 326 +++++++-- inst/doc/Introduction_to_datasus.html | 1128 ++++++++++++++++++-------------- inst/doc/accessing-datasus.R |only inst/doc/accessing-datasus.Rmd |only inst/doc/accessing-datasus.html |only inst/doc/geography-and-analysis.R |only inst/doc/geography-and-analysis.Rmd |only inst/doc/geography-and-analysis.html |only inst/doc/large-files-and-microdata.R |only inst/doc/large-files-and-microdata.Rmd |only inst/doc/large-files-and-microdata.html |only inst/doc/modern-surveillance.R |only inst/doc/modern-surveillance.Rmd |only inst/doc/modern-surveillance.html |only man/adicionar_territorio.Rd |only man/calcular_indicador.Rd |only man/calcular_taxa.Rd |only man/calendario_epidemiologico.Rd |only man/cnes.Rd |only man/completar_territorios.Rd |only man/datasus-package.Rd |only man/datasus_catalogo.Rd |only man/datasus_dicionario.Rd |only man/datasus_opcoes.Rd |only man/datasus_padronizar.Rd |only man/datasus_proveniencia.Rd |only man/datasus_territorios.Rd |only man/datasus_validar_esquema.Rd |only man/esavi.Rd |only man/esus_sindrome_gripal.Rd |only man/extrair_codigo_ibge.Rd |only man/financiamento_sus.Rd |only man/intervalo_taxa.Rd |only man/juntar_populacao.Rd |only man/letalidade.Rd |only man/media_movel.Rd |only man/microdados_arquivos.Rd |only man/microdados_baixar.Rd |only man/microdados_catalogo.Rd |only man/microdados_ler.Rd |only man/normalizar_codigo_ibge.Rd |only man/ocupacao_hospitalar.Rd |only man/opendatasus_arquivos.Rd |only man/opendatasus_baixar.Rd |only man/opendatasus_catalogo.Rd |only man/opendatasus_ler.Rd |only man/opendatasus_processar.Rd |only man/opendatasus_recursos.Rd |only man/padronizar_idade.Rd |only man/pni_doses.Rd |only man/pni_imunizacoes.Rd |only man/populacao_padrao.Rd |only man/populacao_residente.Rd |only man/proporcao.Rd |only man/semana_epidemiologica.Rd |only man/sia_producao.Rd |only man/sih_microdados.Rd |only man/sih_morbidade.Rd |only man/sih_producao.Rd |only man/sim.Rd |only man/sim_evita10_bruf.Rd | 18 man/sim_evita10_mun.Rd | 18 man/sim_evita10_uf.Rd | 18 man/sim_evitb10_bruf.Rd | 18 man/sim_evitb10_mun.Rd | 18 man/sim_evitb10_uf.Rd | 18 man/sim_inf10_bruf.Rd | 18 man/sim_inf10_mun.Rd | 18 man/sim_inf10_uf.Rd | 18 man/sim_microdados.Rd |only man/sim_obt10_bruf.Rd | 18 man/sim_obt10_mun.Rd | 18 man/sim_obt10_uf.Rd | 18 man/sinan.Rd |only man/sinan_dengue.Rd |only man/sinan_mpox.Rd |only man/sinasc.Rd |only man/sinasc_microdados.Rd |only man/sinasc_nv_bruf.Rd | 18 man/sinasc_nv_mun.Rd | 18 man/sinasc_nv_uf.Rd | 18 man/siscan.Rd |only man/sisvan.Rd |only man/sivep_gripe.Rd |only man/taxa_incidencia.Rd |only man/taxa_mortalidade.Rd |only man/validar_codigo_ibge.Rd |only tests |only vignettes/Introduction_to_datasus.Rmd | 326 +++++++-- vignettes/accessing-datasus.Rmd |only vignettes/geography-and-analysis.Rmd |only vignettes/large-files-and-microdata.Rmd |only vignettes/modern-surveillance.Rmd |only 127 files changed, 3530 insertions(+), 10902 deletions(-)
Title: Easy Access to Model Information for Various Model Objects
Description: A tool to provide an easy, intuitive and consistent
access to information contained in various R models, like model
formulas, model terms, information about random effects, data that was
used to fit the model or data from response variables. 'insight'
mainly revolves around two types of functions: Functions that find
(the names of) information, starting with 'find_', and functions that
get the underlying data, starting with 'get_'. The package has a
consistent syntax and works with many different model objects, where
otherwise functions to access these information are missing.
Author: Daniel Luedecke [aut, cre] ,
Dominique Makowski [aut, ctb] ,
Indrajeet Patil [aut, ctb] ,
Philip Waggoner [aut, ctb] ,
Mattan S. Ben-Shachar [aut, ctb] ,
Brenton M. Wiernik [aut, ctb] ,
Vincent Arel-Bundock [aut, ctb] ,
Etienne Bacher [aut, ctb] ,
Ale [...truncated...]
Maintainer: Daniel Luedecke <officialeasystats@gmail.com>
Diff between insight versions 1.5.3 dated 2026-08-25 and 1.5.4 dated 2026-09-05
DESCRIPTION | 6 MD5 | 20 NAMESPACE | 1 NEWS.md | 11 R/get_statistic.R | 18 R/utils_model_info.R | 2 inst/doc/display.html | 1045 +++++++++++++++++++++++++++++------- tests/testthat/test-find_smooth.R | 1 tests/testthat/test-get_datagrid.R | 2 tests/testthat/test-get_predicted.R | 11 tests/testthat/test-rlmer.R | 20 11 files changed, 928 insertions(+), 209 deletions(-)
Title: Preprocessing Operators and Pipelines for 'mlr3'
Description: Dataflow programming toolkit that enriches 'mlr3' with a diverse
set of pipelining operators ('PipeOps') that can be composed into graphs.
Operations exist for data preprocessing, model fitting, and ensemble
learning. Graphs can themselves be treated as 'mlr3' 'Learners' and can
therefore be resampled, benchmarked, and tuned.
Author: Martin Binder [aut, cre],
Florian Pfisterer [aut] ,
Lennart Schneider [aut] ,
Bernd Bischl [aut] ,
Michel Lang [aut] ,
Sebastian Fischer [aut] ,
Susanne Dandl [aut],
Keno Mersmann [ctb],
Maximilian Muecke [ctb] ,
Lona Koers [ctb],
Alexander Winterstet [...truncated...]
Maintainer: Martin Binder <mlr.developer@mb706.com>
Diff between mlr3pipelines versions 0.11.0 dated 2026-03-01 and 0.12.0 dated 2026-09-05
mlr3pipelines-0.11.0/mlr3pipelines/R/greplicate.R |only mlr3pipelines-0.11.0/mlr3pipelines/man/greplicate.Rd |only mlr3pipelines-0.12.0/mlr3pipelines/DESCRIPTION | 30 mlr3pipelines-0.12.0/mlr3pipelines/MD5 | 381 +++++----- mlr3pipelines-0.12.0/mlr3pipelines/NAMESPACE | 22 mlr3pipelines-0.12.0/mlr3pipelines/NEWS.md | 30 mlr3pipelines-0.12.0/mlr3pipelines/R/CnfAtom.R | 1 mlr3pipelines-0.12.0/mlr3pipelines/R/CnfClause.R | 1 mlr3pipelines-0.12.0/mlr3pipelines/R/CnfFormula.R | 1 mlr3pipelines-0.12.0/mlr3pipelines/R/Graph.R | 12 mlr3pipelines-0.12.0/mlr3pipelines/R/GraphLearner.R | 50 - mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOp.R | 31 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpADAS.R | 4 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpBLSmote.R | 4 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpDateFeatures.R | 99 ++ mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpFilter.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpImputeConstant.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpImputeHist.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpImputeLearner.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpImputeMean.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpImputeMedian.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpImputeMode.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpImputeOOR.R | 6 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpImputeSample.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpIsomap.R | 7 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpLearner.R | 9 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpLearnerCV.R | 1 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpMaterialize.R |only mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpMissingIndicators.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpNMF.R | 31 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpSmote.R | 4 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpSmoteNC.R | 4 mlr3pipelines-0.12.0/mlr3pipelines/R/PipeOpTrafo.R | 27 mlr3pipelines-0.12.0/mlr3pipelines/R/Selector.R | 79 +- mlr3pipelines-0.12.0/mlr3pipelines/R/mlr_graphs.R | 16 mlr3pipelines-0.12.0/mlr3pipelines/R/mlr_pipeops.R | 20 mlr3pipelines-0.12.0/mlr3pipelines/R/pipeline_greplicate.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/R/preproc.R | 15 mlr3pipelines-0.12.0/mlr3pipelines/R/utils.R | 8 mlr3pipelines-0.12.0/mlr3pipelines/R/zzz.R | 21 mlr3pipelines-0.12.0/mlr3pipelines/build/partial.rdb |binary mlr3pipelines-0.12.0/mlr3pipelines/build/vignette.rds |binary mlr3pipelines-0.12.0/mlr3pipelines/inst/doc/extending.html | 6 mlr3pipelines-0.12.0/mlr3pipelines/man/CnfAtom.Rd | 10 mlr3pipelines-0.12.0/mlr3pipelines/man/CnfClause.Rd | 10 mlr3pipelines-0.12.0/mlr3pipelines/man/CnfFormula.Rd | 10 mlr3pipelines-0.12.0/mlr3pipelines/man/CnfSymbol.Rd | 10 mlr3pipelines-0.12.0/mlr3pipelines/man/CnfUniverse.Rd | 10 mlr3pipelines-0.12.0/mlr3pipelines/man/Graph.Rd | 7 mlr3pipelines-0.12.0/mlr3pipelines/man/Multiplicity.Rd | 6 mlr3pipelines-0.12.0/mlr3pipelines/man/NO_OP.Rd | 14 mlr3pipelines-0.12.0/mlr3pipelines/man/PipeOp.Rd | 15 mlr3pipelines-0.12.0/mlr3pipelines/man/PipeOpEncodePL.Rd | 5 mlr3pipelines-0.12.0/mlr3pipelines/man/PipeOpEnsemble.Rd | 9 mlr3pipelines-0.12.0/mlr3pipelines/man/PipeOpImpute.Rd | 5 mlr3pipelines-0.12.0/mlr3pipelines/man/PipeOpTargetTrafo.Rd | 6 mlr3pipelines-0.12.0/mlr3pipelines/man/PipeOpTaskPreproc.Rd | 6 mlr3pipelines-0.12.0/mlr3pipelines/man/PipeOpTaskPreprocSimple.Rd | 6 mlr3pipelines-0.12.0/mlr3pipelines/man/Selector.Rd | 39 - mlr3pipelines-0.12.0/mlr3pipelines/man/add_class_hierarchy_cache.Rd | 8 mlr3pipelines-0.12.0/mlr3pipelines/man/as_graph.Rd | 15 mlr3pipelines-0.12.0/mlr3pipelines/man/as_pipeop.Rd | 15 mlr3pipelines-0.12.0/mlr3pipelines/man/assert_graph.Rd | 15 mlr3pipelines-0.12.0/mlr3pipelines/man/assert_pipeop.Rd | 15 mlr3pipelines-0.12.0/mlr3pipelines/man/chain_graphs.Rd | 15 mlr3pipelines-0.12.0/mlr3pipelines/man/filter_noop.Rd | 4 mlr3pipelines-0.12.0/mlr3pipelines/man/grapes-greater-than-greater-than-grapes.Rd | 15 mlr3pipelines-0.12.0/mlr3pipelines/man/gunion.Rd | 15 mlr3pipelines-0.12.0/mlr3pipelines/man/is_noop.Rd | 4 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr3pipelines-package.Rd | 1 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_filters_ensemble.Rd | 4 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_graphs.Rd | 15 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_graphs_greplicate.Rd | 19 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_learners_avg.Rd | 4 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_learners_graph.Rd | 13 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops.Rd | 10 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_adas.Rd | 7 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_blsmote.Rd | 6 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_boxcox.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_branch.Rd | 9 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_chunk.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_classbalancing.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_classifavg.Rd | 9 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_classweights.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_classweightsex.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_colapply.Rd | 5 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_collapsefactors.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_colroles.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_copy.Rd | 5 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_datefeatures.Rd | 51 - mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_decode.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_encode.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_encodeimpact.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_encodelmer.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_encodeplquantiles.Rd | 5 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_encodepltree.Rd | 13 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_featureunion.Rd | 7 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_filter.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_fixfactors.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_histbin.Rd | 5 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_ica.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_imputeconstant.Rd | 7 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_imputehist.Rd | 7 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_imputelearner.Rd | 7 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_imputemean.Rd | 7 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_imputemedian.Rd | 7 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_imputemode.Rd | 7 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_imputeoor.Rd | 11 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_imputesample.Rd | 7 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_info.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_isomap.Rd | 6 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_kernelpca.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_learner.Rd | 8 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_learner_cv.Rd | 2 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_learner_pi_cvplus.Rd | 5 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_learner_quantiles.Rd | 5 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_materialize.Rd |only mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_missind.Rd | 5 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_modelmatrix.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_multiplicityexply.Rd | 11 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_multiplicityimply.Rd | 11 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_mutate.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_nearmiss.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_nmf.Rd | 9 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_nop.Rd | 5 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_ovrsplit.Rd | 11 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_ovrunite.Rd | 13 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_pca.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_proxy.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_quantilebin.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_randomprojection.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_randomresponse.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_regravg.Rd | 9 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_removeconstants.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_renamecolumns.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_replicate.Rd | 11 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_rowapply.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_scale.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_scalemaxabs.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_scalerange.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_select.Rd | 5 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_smote.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_smotenc.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_spatialsign.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_splines.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_subsample.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_targetinvert.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_targetmutate.Rd | 5 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_targettrafoscalerange.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_textvectorizer.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_threshold.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_tomek.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_tunethreshold.Rd | 5 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_unbranch.Rd | 9 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_updatetarget.Rd | 8 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_vtreat.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_pipeops_yeojohnson.Rd | 3 mlr3pipelines-0.12.0/mlr3pipelines/man/mlr_tasks_boston_housing.Rd | 2 mlr3pipelines-0.12.0/mlr3pipelines/man/preproc.Rd | 15 mlr3pipelines-0.12.0/mlr3pipelines/man/reexports.Rd | 2 mlr3pipelines-0.12.0/mlr3pipelines/man/register_autoconvert_function.Rd | 8 mlr3pipelines-0.12.0/mlr3pipelines/man/reset_autoconvert_register.Rd | 8 mlr3pipelines-0.12.0/mlr3pipelines/man/reset_class_hierarchy_cache.Rd | 8 mlr3pipelines-0.12.0/mlr3pipelines/man/set_validate.GraphLearner.Rd | 4 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_GraphLearner.R | 95 ++ mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_mlr_graphs_greplicate.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_mlr_graphs_robustify.R | 4 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_multiplicities.R | 8 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_adas.R | 25 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_blsmote.R | 23 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_classbalancing.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_classweights.R | 4 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_colapply.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_datefeatures.R | 138 +++ mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_filter.R | 19 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_impute.R | 4 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_imputelearner.R | 8 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_isomap.R | 14 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_learner.R | 8 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_materialize.R |only mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_missind.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_nmf.R | 38 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_scale.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_smote.R | 25 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_smotenc.R | 25 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_targetinvert.R | 33 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_targetmutate.R | 20 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_targettrafoscalerange.R | 18 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_tunethreshold.R | 12 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_unbranch.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_updatetarget.R | 21 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_pipeop_vtreat.R | 2 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_preproc.R | 4 mlr3pipelines-0.12.0/mlr3pipelines/tests/testthat/test_selector.R | 91 ++ 194 files changed, 1715 insertions(+), 729 deletions(-)
Title: Tests and Measures for Homoscedasticity
Description: Provides statistical methods for assessing homoscedasticity
(equality of variances) across groups. The package implements
classical and robust tests for variance homogeneity, together with
supporting measures and utilities for exploratory analysis and
hypothesis testing. These tools can be used as diagnostic procedures
prior to analyses that assume equal variances.
Author: Joon-Keat Lai [aut, cre, cph]
Maintainer: Joon-Keat Lai <p10911004@gmail.com>
Diff between varequal versions 0.0.1 dated 2026-07-09 and 0.0.2 dated 2026-09-05
DESCRIPTION | 13 +-- MD5 | 36 ++++---- NEWS.md |only R/Lam_G_test.R | 8 - R/O.Brien_test.R | 2 R/O.Neill_Mathews_test.R | 2 R/benchmarking.R | 2 R/check_var_equal.R | 203 +++++++++++++++++++++++++---------------------- R/data.R | 16 +++ R/is_var_equal.R | 19 ++-- R/utils.R | 3 README.md | 67 +++++++++++++++ build |only inst |only man/CYCB1.Rd | 8 + man/Lam_G_test.Rd | 10 +- man/check_var_equal.Rd | 12 +- man/is_var_equal.Rd | 12 +- man/roGFP.Rd | 10 +- vignettes |only 20 files changed, 272 insertions(+), 151 deletions(-)
Title: Multivariate Meta-Analysis of Dynamic Model Estimates
Description: Fits fixed-, random-, or mixed-effects multivariate meta-analysis models
using dynamic model estimates from each individual
building on and extending Lee and Gates (2023) <doi:10.1080/00273171.2023.2229310>.
Author: Ivan Jacob Agaloos Pesigan [aut, cre, cph]
Maintainer: Ivan Jacob Agaloos Pesigan <r.jeksterslab@gmail.com>
Diff between metaDyn versions 1.0.3 dated 2026-08-01 and 1.0.4 dated 2026-09-05
DESCRIPTION | 10 MD5 | 18 - NEWS.md | 8 R/metaDyn-meta-fit-dot.R | 35 ++- R/metaDyn-methods-metadynmeta.R | 3 R/mxHelper-at-bounds-dot.R | 137 ++++++++++++ R/mxHelper-ensure-good-hessian-dot.R | 356 ++++++++++++++++++++++++-------- R/mxHelper-needs-rescue.R | 29 +- R/mxHelper-nudge-off-bounds-dot.R | 106 +++++++-- R/mxHelper-relax-bounds-at-bounds-dot.R | 47 +++- 10 files changed, 612 insertions(+), 137 deletions(-)
Title: Sample Size and Power Calculation for Two Co-Primary Endpoints
Description: Comprehensive functions to calculate sample size and power for
clinical trials with two co-primary endpoints. The package supports five
endpoint combinations: two continuous endpoints (Sozu et al. 2011
<doi:10.1080/10543406.2011.551329>), two binary endpoints using asymptotic
methods (Sozu et al. 2010 <doi:10.1002/sim.3972>) and exact methods (Homma
and Yoshida 2025 <doi:10.1177/09622802251368697>), mixed continuous and
binary endpoints (Sozu et al. 2012 <doi:10.1002/bimj.201100221>), and mixed
count and continuous endpoints (Homma and Yoshida 2024
<doi:10.1002/pst.2337>). All methods appropriately account for correlation
between endpoints and provide both sample size and power calculation
capabilities.
Author: Gosuke Homma [aut, cre]
Maintainer: Gosuke Homma <my.name.is.gosuke@gmail.com>
Diff between twoCoprimary versions 1.1.0 dated 2026-08-29 and 1.1.1 dated 2026-09-05
DESCRIPTION | 6 MD5 | 103 ++--- NEWS.md | 226 +++++++++++ R/RcppExports.R | 14 R/corrbound2MixedCountContinuous.R | 208 +++++----- R/dbibinom.R | 9 R/design_table.R | 18 R/plot.twoCoprimary.R | 156 +++++--- R/power2BinaryApprox.R | 544 +++++++++++++++------------- R/power2Continuous.R | 80 +++- R/power2MixedContinuousBinary.R | 30 + R/power2MixedCountContinuous.R | 389 +++++++++----------- R/rr1Binary.R | 33 + R/ss1BinaryApprox.R | 506 +++++++++++++------------- R/ss1Continuous.R | 170 ++++---- R/ss1Count.R | 231 ++++++----- R/ss2MixedCountContinuous.R | 24 + R/twoCoprimary2BinaryExact.R | 7 R/utils_clamp_coprimary.R |only R/utils_pbivnorm_safe.R |only R/utils_power2MixedCountContinuous_core.R |only R/utils_sequential_search.R | 12 README.md | 2 inst/WORDLIST | 2 inst/doc/mixed-continuous-binary.Rmd | 18 inst/doc/mixed-continuous-binary.html | 51 +- inst/doc/mixed-count-continuous.Rmd | 6 inst/doc/mixed-count-continuous.html | 17 inst/doc/overview.Rmd | 22 - inst/doc/overview.html | 43 +- inst/doc/two-binary-endpoints-approx.Rmd | 15 inst/doc/two-binary-endpoints-approx.html | 35 - inst/doc/two-binary-endpoints-exact.Rmd | 38 - inst/doc/two-binary-endpoints-exact.html | 81 ++-- inst/doc/two-continuous-endpoints.Rmd | 8 inst/doc/two-continuous-endpoints.html | 18 man/design_table.Rd | 12 man/plot.twoCoprimary.Rd | 17 man/power2MixedContinuousBinary.Rd | 1 man/power2MixedCountContinuous.Rd | 15 man/ss1BinaryApprox.Rd | 27 - man/ss1Count.Rd | 4 man/ss2MixedCountContinuous.Rd | 4 man/twoCoprimary2BinaryExact.Rd | 7 tests/testthat/test-edge-cases.R |only tests/testthat/test-mixed_fisher.R | 2 tests/testthat/test-plot-methods.R |only tests/testthat/test-power_functions.R | 38 + tests/testthat/test-sample_size_functions.R | 24 + vignettes/mixed-continuous-binary.Rmd | 18 vignettes/mixed-count-continuous.Rmd | 6 vignettes/overview.Rmd | 22 - vignettes/two-binary-endpoints-approx.Rmd | 15 vignettes/two-binary-endpoints-exact.Rmd | 38 - vignettes/two-continuous-endpoints.Rmd | 8 55 files changed, 1997 insertions(+), 1383 deletions(-)
Title: Alocă Pe Ore Lecțiile Zilei
Description: Lecțiile prof/cls trebuie completate cu un câmp "ora", astfel ca
oricare două lecții prof/cls/ora să nu se suprapună într-o aceeași oră.
The prof/cls lessons must be completed with a "hour" field ('ora), so that
any two prof/cls/ora lessons do not overlap in the same hour.
<https://vlad.bazon.net/>.
Author: Vlad Bazon [aut, cre]
Maintainer: Vlad Bazon <vlad.bazon@gmail.com>
Diff between hours2lessons versions 0.1.4 dated 2025-05-21 and 0.1.5 dated 2026-09-05
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- NEWS.md | 7 ++++++- R/mount_hours.R | 2 +- inst/doc/orarul-zilei.html | 18 +++++++++--------- 5 files changed, 23 insertions(+), 18 deletions(-)
Title: Crawler for Navigating THREDDS Catalogs
Description: Provides a crawler for programmatically navigating THREDDS Data Server (<https://www.unidata.ucar.edu/software/tds>)
catalogs, and access dataset metadata and resources.
Author: Ben Tupper [aut],
Emmanuel Blondel [aut, cre] ,
Bigelow Laboratory for Ocean Sciences [cph]
Maintainer: Emmanuel Blondel <emmanuel.blondel1@gmail.com>
Diff between thredds versions 0.1-4 dated 2023-09-01 and 0.1-5 dated 2026-09-05
DESCRIPTION | 17 ++-- MD5 | 12 +-- R/CatalogNode.R | 24 ++---- R/thredds-package.R | 3 README.md | 203 +++++++++++++++++++++------------------------------- man/CatalogNode.Rd | 24 ++---- man/thredds.Rd | 22 +++++ 7 files changed, 144 insertions(+), 161 deletions(-)
Title: 'Rcpp' Integration for 'CGAL'
Description: Creates a header only package to link to the 'CGAL'
(Computational Geometry Algorithms Library)
header files in 'Rcpp'. There are a variety of potential uses for
the software such as Hilbert sorting, K-D Tree nearest neighbors,
and convex hull algorithms. For more information about how to use the header files,
see the 'CGAL' documentation at <https://www.cgal.org>. Currently
downloads version 6.2.1 of the 'CGAL' header files.
Author: Eric Dunipace [aut, cre] ,
Tyler Morgan-Wall [ctb],
The CGAL Project [cph]
Maintainer: Eric Dunipace <edunipace@mail.harvard.edu>
Diff between RcppCGAL versions 6.1 dated 2025-10-09 and 6.2.1 dated 2026-09-05
DESCRIPTION | 12 ++++++------ MD5 | 20 ++++++++++---------- NEWS.md | 9 ++++++++- README.md | 2 +- build/vignette.rds |binary inst/AUTHORS | 4 +++- inst/WORDLIST | 2 ++ inst/doc/Installation.html | 4 ++-- inst/include/CGAL_zip.tar.xz |binary man/RcppCGAL-package.Rd | 7 ++++++- tools/config/configure.R | 34 +++++++++++++++++++--------------- 11 files changed, 57 insertions(+), 37 deletions(-)
Title: Fit the Vector Autoregressive Model for Multiple Individuals
Description: Fit the vector autoregressive model for multiple individuals
using the 'OpenMx' package (Hunter, 2017 <doi:10.1080/10705511.2017.1369354>).
Author: Ivan Jacob Agaloos Pesigan [aut, cre, cph]
Maintainer: Ivan Jacob Agaloos Pesigan <r.jeksterslab@gmail.com>
Diff between fitVARMxID versions 1.0.5 dated 2026-08-02 and 1.0.6 dated 2026-09-05
DESCRIPTION | 8 MD5 | 16 - NEWS.md | 8 R/fitVARMxID-fit-dt-var-mx-id-dot.R | 86 +++++++ R/mxHelper-at-bounds-dot.R | 137 ++++++++++++ R/mxHelper-ensure-good-hessian-dot.R | 356 ++++++++++++++++++++++++-------- R/mxHelper-needs-rescue.R | 29 +- R/mxHelper-nudge-off-bounds-dot.R | 106 +++++++-- R/mxHelper-relax-bounds-at-bounds-dot.R | 47 +++- 9 files changed, 658 insertions(+), 135 deletions(-)
Title: Compute and Summarize Core Forest Metrics from Field Data
Description: A suite of open-source R functions designed to produce standard
metrics for forest management and ecology from forest inventory data. The
overarching goal is to minimize potential inconsistencies introduced by the
algorithms used to compute and summarize core forest metrics. Learn more
about the purpose of the package and the specific algorithms used in the
package at <https://github.com/kearutherford/BerkeleyForestsAnalytics>.
Author: Kea Rutherford [aut, cre],
John Battles [aut],
Danny Foster [aut],
The Regents of the University of California [cph]
Maintainer: Kea Rutherford <krutherford@berkeley.edu>
Diff between BerkeleyForestsAnalytics versions 3.0.1 dated 2026-03-17 and 4.0.0 dated 2026-09-05
BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/R/summary_bio.R |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/R/summary_bio_loops.R |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/R/tree_bio.R |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/R/tree_bio_bark.R |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/R/tree_bio_branch.R |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/R/tree_bio_stem.R |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/data/bio_NT_demo.rda |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/data/bio_demo_data.rda |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/man/SummaryBiomass.Rd |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/man/TreeBiomass.Rd |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/man/bio_NT_demo.Rd |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/man/bio_demo_data.Rd |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/tests/testthat/test-summary_biomass.R |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/tests/testthat/test-tree_biomass.R |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/tests/testthat/test-validate_sum_data.R |only BerkeleyForestsAnalytics-3.0.1/BerkeleyForestsAnalytics/tests/testthat/test-validate_tree_data.R |only BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/DESCRIPTION | 6 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/MD5 | 98 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/NAMESPACE | 3 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/NEWS.md | 4 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/R/data.R | 953 ++- BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/R/forest_comp.R | 232 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/R/forest_structure.R | 224 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/R/nsvb_formatting.R | 2384 +++++----- BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/R/stand_density.R |only BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/R/surface_fuels_overstory.R | 2 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/R/sysdata.rda |binary BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/README.md | 1293 +---- BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/data/for_NT_demo.rda |binary BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/data/for_demo_data.rda |binary BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/data/sdi_demo_subs.rda |only BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/data/sdi_demo_subs_plots.rda |only BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/data/sdi_demo_trees.rda |only BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/data/vign_trees_1.rda |binary BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/data/vign_trees_2.rda |binary BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/data/vign_trees_3.rda |binary BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/data/vign_trees_4.rda |binary BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/data/vign_trees_5.rda |binary BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/inst/CITATION | 2 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/inst/doc/BerkeleyForestsAnalytics.R | 141 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/inst/doc/BerkeleyForestsAnalytics.Rmd | 976 +--- BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/inst/doc/BerkeleyForestsAnalytics.html | 2193 +++++++-- BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/man/ForestComp.Rd | 38 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/man/ForestStr.Rd | 23 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/man/StandDensity.Rd |only BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/man/for_NT_demo.Rd | 13 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/man/for_demo_data.Rd | 14 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/man/nsvb_demo.Rd | 4 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/man/sdi_demo_subs.Rd |only BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/man/sdi_demo_subs_plots.Rd |only BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/man/sdi_demo_trees.Rd |only BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/man/vign_trees_1.Rd | 16 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/man/vign_trees_2.Rd | 16 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/man/vign_trees_3.Rd | 16 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/man/vign_trees_4.Rd | 16 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/man/vign_trees_5.Rd | 16 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/tests/testthat/test-forest_comp.R | 30 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/tests/testthat/test-forest_str.R | 33 BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/tests/testthat/test-stand_density.R |only BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/tests/testthat/test-validate_SDI.R |only BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/tests/testthat/test-validate_comp_data.R | 344 - BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/tests/testthat/test-validate_str_data.R | 247 - BerkeleyForestsAnalytics-4.0.0/BerkeleyForestsAnalytics/vignettes/BerkeleyForestsAnalytics.Rmd | 976 +--- 63 files changed, 5613 insertions(+), 4700 deletions(-)
More information about BerkeleyForestsAnalytics at CRAN
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Previous versions (as known to CRANberries) which should be available via the Archive link are:
2026-08-22 0.1.1
2026-08-09 0.1.0