Title: A Unified Tidy Interface to R's Machine Learning Ecosystem
Description: Provides a unified tidyverse-compatible interface to R's machine
learning ecosystem - from data ingestion to model publishing. The tl_read()
family reads data from files ('CSV', 'Excel', 'Parquet', 'JSON'), databases
('SQLite', 'PostgreSQL', 'MySQL', 'BigQuery'), and cloud sources ('S3',
'GitHub', 'Kaggle'). The tl_model() function wraps established
implementations from 'glmnet', 'randomForest', 'xgboost', 'e1071', 'rpart',
'gbm', 'nnet', 'cluster', 'dbscan', and others with consistent function
signatures and tidy tibble output. Results flow into unified 'ggplot2'-based
visualization and optional formatted 'gt' tables via the tl_table() family.
The underlying algorithms are unchanged; 'tidylearn' simply makes them
easier to use together. Access raw model objects via the $fit slot for a
supervised method, or $fit$model for an unsupervised one.
Methods include random forests Breiman (2001) <doi:10.1023/A:1010933404324>,
LASSO regression Tibshirani (1996) <doi:10.1111/j.2517-6161 [...truncated...]
Author: Cesaire Tobias [aut, cre]
Maintainer: Cesaire Tobias <cesaire@sheetsolved.com>
Diff between tidylearn versions 0.5.0 dated 2026-09-02 and 0.6.0 dated 2026-10-08
DESCRIPTION | 16 MD5 | 476 +- NAMESPACE | 2 NEWS.md | 5235 ++++++++++++++++++++++-------- R/cloud-cost.R | 78 R/cloud-endpoint.R | 53 R/coefficients.R |only R/compute-advisor.R | 176 - R/compute-detection.R | 81 R/core.R | 621 +++ R/diagnostics.R | 455 +- R/integration.R | 818 +++- R/interactions.R | 910 ++++- R/metrics.R | 1683 ++++++--- R/model-selection.R | 521 ++ R/pipeline.R | 333 + R/preprocessing.R | 396 +- R/read-backends.R | 817 +++- R/read.R | 799 +++- R/supervised-classification.R | 462 +- R/supervised-deep-learning.R | 381 +- R/supervised-neural-networks.R | 897 ++--- R/supervised-regression.R | 367 +- R/supervised-regularization.R | 591 ++- R/supervised-svm.R | 201 - R/supervised-trees.R | 1916 +++++++--- R/supervised-xgboost.R | 971 ++++- R/tables.R | 544 ++- R/tuning.R | 1661 +++++++-- R/unsupervised-clustering.R | 178 - R/unsupervised-dbscan.R | 130 R/unsupervised-distance.R | 404 ++ R/unsupervised-hclust.R | 119 R/unsupervised-market-basket.R | 1319 ++++--- R/unsupervised-mds.R | 119 R/unsupervised-pca.R | 62 R/unsupervised-validation.R | 206 - R/utils.R | 810 ++++ R/visualization.R | 1174 +++++- R/workflows.R | 658 ++- README.md | 28 inst/doc/automl.R | 24 inst/doc/automl.Rmd | 71 inst/doc/automl.html | 141 inst/doc/compute-backends.Rmd | 11 inst/doc/compute-backends.html | 12 inst/doc/data-ingestion.R | 8 inst/doc/data-ingestion.Rmd | 8 inst/doc/data-ingestion.html | 24 inst/doc/diagnostics.R | 20 inst/doc/diagnostics.Rmd | 33 inst/doc/diagnostics.html | 192 - inst/doc/getting-started.R | 4 inst/doc/getting-started.Rmd | 14 inst/doc/getting-started.html | 38 inst/doc/integration-workflows.R | 2 inst/doc/integration-workflows.Rmd | 2 inst/doc/integration-workflows.html | 19 inst/doc/market-basket.R | 24 inst/doc/market-basket.Rmd | 50 inst/doc/market-basket.html | 429 -- inst/doc/reporting.R | 6 inst/doc/reporting.Rmd | 50 inst/doc/reporting.html | 1288 +++++-- inst/doc/supervised-learning.R | 8 inst/doc/supervised-learning.Rmd | 22 inst/doc/supervised-learning.html | 30 inst/doc/tuning-and-pipelines.R | 2 inst/doc/tuning-and-pipelines.Rmd | 17 inst/doc/tuning-and-pipelines.html | 57 inst/doc/unsupervised-learning.R | 8 inst/doc/unsupervised-learning.Rmd | 22 inst/doc/unsupervised-learning.html | 72 inst/examples/unified_workflow.R | 14 inst/security/threat-model.md | 22 man/calc_validation_metrics.Rd | 15 man/compare_clusterings.Rd | 3 man/create_cluster_dashboard.Rd | 11 man/figures/logo.png |binary man/filter_rules_by_item.Rd | 7 man/find_related_items.Rd | 7 man/inspect_rules.Rd | 14 man/optimal_hclust_k.Rd | 5 man/plot_cluster_comparison.Rd | 2 man/plot_clusters.Rd | 6 man/plot_dendrogram.Rd | 4 man/plot_knn_dist.Rd | 2 man/predict.tidylearn_model.Rd | 16 man/predict.tidylearn_stratified.Rd | 14 man/print.tidylearn_data.Rd | 1 man/recommend_products.Rd | 8 man/standardize_data.Rd | 6 man/suggest_eps.Rd | 5 man/summarize_rules.Rd | 3 man/tidy_apriori.Rd | 25 man/tidy_clara.Rd | 11 man/tidy_dbscan.Rd | 19 man/tidy_dist.Rd | 3 man/tidy_gap_stat.Rd | 10 man/tidy_gower.Rd | 4 man/tidy_hclust.Rd | 4 man/tidy_kmeans.Rd | 1 man/tidy_mds.Rd | 4 man/tidy_pam.Rd | 16 man/tidy_pca.Rd | 4 man/tidy_rules.Rd | 10 man/tidy_silhouette.Rd | 5 man/tidylearn-coefficients.Rd |only man/tidylearn-read.Rd | 24 man/tl_anomaly_aware.Rd | 23 man/tl_auto_interactions.Rd | 12 man/tl_auto_ml.Rd | 77 man/tl_calc_classification_metrics.Rd | 66 man/tl_calculate_pr_auc.Rd | 13 man/tl_check_assumptions.Rd | 16 man/tl_check_gpu.Rd | 16 man/tl_cloud_allow_host.Rd | 9 man/tl_coefficients.Rd |only man/tl_compare_cv.Rd | 39 man/tl_compare_pipeline_models.Rd | 4 man/tl_compute_advisor.Rd | 21 man/tl_cv.Rd | 27 man/tl_dashboard.Rd | 8 man/tl_default_param_grid.Rd | 23 man/tl_detect_outliers.Rd | 8 man/tl_diagnostic_dashboard.Rd | 4 man/tl_evaluate.Rd | 26 man/tl_explore.Rd | 13 man/tl_extract_importance.Rd | 3 man/tl_fit_boost.Rd | 14 man/tl_fit_deep.Rd | 11 man/tl_fit_elastic_net.Rd | 6 man/tl_fit_forest.Rd | 3 man/tl_fit_lasso.Rd | 6 man/tl_fit_nn.Rd | 4 man/tl_fit_regularized.Rd | 27 man/tl_fit_ridge.Rd | 6 man/tl_fit_svm.Rd | 5 man/tl_fit_tree.Rd | 4 man/tl_fit_xgboost.Rd | 15 man/tl_get_best_model.Rd | 10 man/tl_get_importance_regularized.Rd | 44 man/tl_interaction_effects.Rd | 31 man/tl_model.Rd | 99 man/tl_pipeline.Rd | 16 man/tl_plot_deep_architecture.Rd | 11 man/tl_plot_importance_comparison.Rd | 20 man/tl_plot_importance_regularized.Rd | 4 man/tl_plot_interaction.Rd | 34 man/tl_plot_model.Rd | 4 man/tl_plot_model_comparison.Rd | 7 man/tl_plot_partial_dependence.Rd | 7 man/tl_plot_svm_boundary.Rd | 10 man/tl_plot_tree.Rd | 2 man/tl_plot_tuning_results.Rd | 9 man/tl_plot_xgboost_importance.Rd | 16 man/tl_plot_xgboost_shap_dependence.Rd | 7 man/tl_plot_xgboost_shap_summary.Rd | 6 man/tl_plot_xgboost_tree.Rd | 9 man/tl_predict_xgboost.Rd | 5 man/tl_prepare_data.Rd | 34 man/tl_read.Rd | 52 man/tl_read_bigquery.Rd | 25 man/tl_read_csv.Rd | 7 man/tl_read_db.Rd | 13 man/tl_read_dir.Rd | 29 man/tl_read_excel.Rd | 11 man/tl_read_github.Rd | 32 man/tl_read_json.Rd | 24 man/tl_read_kaggle.Rd | 32 man/tl_read_mysql.Rd | 28 man/tl_read_parquet.Rd | 10 man/tl_read_postgres.Rd | 31 man/tl_read_rdata.Rd | 22 man/tl_read_rds.Rd | 17 man/tl_read_s3.Rd | 26 man/tl_read_sqlite.Rd | 12 man/tl_read_tsv.Rd | 7 man/tl_read_zip.Rd | 38 man/tl_reduce_dimensions.Rd | 13 man/tl_run_pipeline.Rd | 5 man/tl_semisupervised.Rd | 43 man/tl_split.Rd | 9 man/tl_step_selection.Rd | 13 man/tl_stratified_models.Rd | 27 man/tl_table.Rd | 2 man/tl_table_clusters.Rd | 7 man/tl_table_coefficients.Rd | 31 man/tl_table_comparison.Rd | 12 man/tl_table_confusion.Rd | 6 man/tl_table_importance.Rd | 2 man/tl_table_loadings.Rd | 2 man/tl_table_metrics.Rd | 5 man/tl_table_variance.Rd | 2 man/tl_test_interactions.Rd | 5 man/tl_test_model_difference.Rd | 12 man/tl_transfer_learning.Rd | 15 man/tl_tune_deep.Rd | 28 man/tl_tune_grid.Rd | 154 man/tl_tune_nn.Rd | 18 man/tl_tune_random.Rd | 45 man/tl_tune_xgboost.Rd | 47 man/tl_xgboost_shap.Rd | 20 man/visualize_rules.Rd | 19 tests/testthat/test-cloud-cost.R | 72 tests/testthat/test-cloud-guards.R | 46 tests/testthat/test-coefficients.R |only tests/testthat/test-compute-advisor.R | 146 tests/testthat/test-compute-detection.R | 129 tests/testthat/test-compute-routing.R | 27 tests/testthat/test-core.R | 883 +++++ tests/testthat/test-degenerate-specs.R | 8 tests/testthat/test-diagnostics.R | 220 + tests/testthat/test-examples.R | 68 tests/testthat/test-integration.R | 772 ++++ tests/testthat/test-interactions.R |only tests/testthat/test-leakage-and-guards.R | 14 tests/testthat/test-metrics-correctness.R | 540 ++- tests/testthat/test-metrics.R | 379 ++ tests/testthat/test-pipeline.R | 501 ++ tests/testthat/test-predict-contract.R | 206 + tests/testthat/test-preprocessing.R | 437 ++ tests/testthat/test-read.R | 1332 +++++++ tests/testthat/test-supervised-backends.R |only tests/testthat/test-supervised-predict.R | 2 tests/testthat/test-supervised.R | 925 +++++ tests/testthat/test-tables.R | 390 ++ tests/testthat/test-tuning.R | 1650 +++++++++ tests/testthat/test-unsupervised.R | 1434 ++++++++ tests/testthat/test-visualization.R | 884 +++++ tests/testthat/test-workflows.R | 289 + vignettes/automl.Rmd | 71 vignettes/compute-backends.Rmd | 11 vignettes/data-ingestion.Rmd | 8 vignettes/diagnostics.Rmd | 33 vignettes/getting-started.Rmd | 14 vignettes/integration-workflows.Rmd | 2 vignettes/market-basket.Rmd | 50 vignettes/reporting.Rmd | 50 vignettes/supervised-learning.Rmd | 22 vignettes/tuning-and-pipelines.Rmd | 17 vignettes/unsupervised-learning.Rmd | 22 242 files changed, 34190 insertions(+), 8997 deletions(-)
Title: External Control Borrowing for Rare Disease Trials
Description: Implements causal inference methods for incorporating external
control data into randomized controlled trials (RCTs) with longitudinal
outcomes. Provides an analysis module supporting weighting-based methods
such as inverse probability weighting (IPW) and augmented inverse
probability weighting (AIPW), difference-in-differences (DID), and
synthetic control approaches for borrowing external control information,
as well as a simulation module for generating trial and external control
data, evaluating estimator performance via Monte Carlo studies, and
conducting power analyses for sample size determination. Methods are
based on Zhou et al. (2025) <doi:10.1093/jrsssa/qnae075> and
Zhou et al. (2024) <doi:10.1080/10543406.2024.2330209>.
Author: Lei Shi [aut],
Matt Secrest [cre, aut] ,
Herbert Pang [aut],
Chen Chen [aut],
Jiawen Zhu [aut],
Genentech, Inc. [cph]
Maintainer: Matt Secrest <secrmatt@gmail.com>
Diff between rdborrow versions 0.0.4.2 dated 2026-10-01 and 0.0.5.0 dated 2026-10-08
DESCRIPTION | 15 - MD5 | 152 ++++++------ NAMESPACE | 4 NEWS.md | 42 +++ R/analysis_OLE_class.R | 30 +- R/analysis_class.R | 27 +- R/analysis_primary_class.R | 25 + R/data.R | 41 +++ R/did_ec_aipw.R | 64 ++++- R/did_ec_ipw.R | 43 ++- R/did_ec_or.R | 70 ++++- R/ec_aipw.R | 111 +++++--- R/ec_ipw.R | 56 +++- R/method_class.R | 238 ++++++++++++++++++ R/package.R | 4 R/rdborrow-package.R | 7 R/run_analysis.R | 27 +- R/run_simulation.R | 14 - R/scm.R | 205 +++++++++++----- R/simulate_outcome_from_model.R | 1 R/simulate_trial.R | 2 R/simulation_class.R | 29 +- README.md | 4 data/SyntheticDataII.rda |only inst/WORDLIST | 13 + inst/doc/OLE_analysis_workflow.R | 6 inst/doc/OLE_analysis_workflow.Rmd | 14 + inst/doc/OLE_analysis_workflow.html | 49 ++- inst/doc/OLE_simulation_workflow.html | 4 inst/doc/introduction.Rmd | 16 - inst/doc/introduction.html | 24 + inst/doc/primary_analysis_workflow.R | 2 inst/doc/primary_analysis_workflow.Rmd | 12 inst/doc/primary_analysis_workflow.html | 26 +- inst/doc/primary_simulation_workflow.R | 4 inst/doc/primary_simulation_workflow.Rmd | 8 inst/doc/primary_simulation_workflow.html | 24 - man/SyntheticData.Rd | 22 + man/SyntheticDataII.Rd |only man/aaa-rdborrow-package.Rd | 7 man/did_ec_aipw.Rd | 36 ++ man/did_ec_ipw.Rd | 28 +- man/did_ec_or.Rd | 25 + man/ec_aipw.Rd | 48 ++- man/ec_ipw.Rd | 24 + man/estimate.Rd | 7 man/run_analysis.Rd | 25 + man/run_simulation.Rd | 2 man/scm.Rd | 33 ++ man/setup_analysis_OLE.Rd | 29 +- man/setup_analysis_primary.Rd | 30 +- man/setup_simulation_OLE.Rd | 10 man/setup_simulation_primary.Rd | 7 man/simulation_OLE_obj-class.Rd | 2 man/simulation_primary_obj-class.Rd | 2 tests/testthat/helper-analysis.R |only tests/testthat/helper-independent.R |only tests/testthat/helper-ole.R |only tests/testthat/test-analysis_OLE_class.R | 13 + tests/testthat/test-analysis_class.R | 278 ++++++++++++++++++++++ tests/testthat/test-analysis_primary_class.R | 6 tests/testthat/test-data.R |only tests/testthat/test-did_ec_aipw.R |only tests/testthat/test-did_ec_ipw.R |only tests/testthat/test-did_ec_or.R |only tests/testthat/test-ec_aipw.R |only tests/testthat/test-ec_ipw.R |only tests/testthat/test-full_pipeline_did_ec_aipw.R | 5 tests/testthat/test-full_pipeline_did_ec_ipw.R | 5 tests/testthat/test-full_pipeline_did_ec_or.R | 3 tests/testthat/test-full_pipeline_ec_aipw.R | 8 tests/testthat/test-full_pipeline_ec_ipw.R | 6 tests/testthat/test-full_pipeline_scm.R | 3 tests/testthat/test-method_class.R | 163 ++++++++++++ tests/testthat/test-run_analysis.R | 226 +++++++++++++++++ tests/testthat/test-run_simulation.R | 46 +++ tests/testthat/test-scm.R |only tests/testthat/test-simulate_outcome_from_model.R | 11 tests/testthat/test-simulation_class.R | 71 +++++ vignettes/OLE_analysis_workflow.Rmd | 14 + vignettes/introduction.Rmd | 16 - vignettes/primary_analysis_workflow.Rmd | 12 vignettes/primary_simulation_workflow.Rmd | 8 83 files changed, 2160 insertions(+), 484 deletions(-)
Title: Partial Dependence Plots
Description: A general framework for constructing partial dependence (i.e.,
marginal effect) plots from various types of machine learning models
in R.
Author: Brandon M. Greenwell [aut, cre]
Maintainer: Brandon M. Greenwell <greenwell.brandon@gmail.com>
Diff between pdp versions 0.8.3 dated 2026-01-23 and 0.10.0 dated 2026-10-08
pdp-0.10.0/pdp/DESCRIPTION | 30 +- pdp-0.10.0/pdp/MD5 | 145 +++------- pdp-0.10.0/pdp/NAMESPACE | 29 -- pdp-0.10.0/pdp/NEWS.md | 142 ++++++++++ pdp-0.10.0/pdp/R/data.R | 90 +++--- pdp-0.10.0/pdp/R/exemplar.R | 40 ++ pdp-0.10.0/pdp/R/get_predictions.R | 162 +++--------- pdp-0.10.0/pdp/R/get_task.R | 13 pdp-0.10.0/pdp/R/get_training_data.R | 6 pdp-0.10.0/pdp/R/pardep.R | 209 +++++++-------- pdp-0.10.0/pdp/R/partial.R | 323 ++++++++++++++---------- pdp-0.10.0/pdp/R/pdp-package.R | 22 - pdp-0.10.0/pdp/R/plot.R |only pdp-0.10.0/pdp/R/plotPartial.R | 172 ++++++------ pdp-0.10.0/pdp/R/pred_grid.R | 17 - pdp-0.10.0/pdp/R/utils.R | 31 +- pdp-0.10.0/pdp/README.md | 134 +++++---- pdp-0.10.0/pdp/build/vignette.rds |binary pdp-0.10.0/pdp/data/pima.RData |binary pdp-0.10.0/pdp/inst/doc/faster-pdp.R |only pdp-0.10.0/pdp/inst/doc/faster-pdp.Rmd |only pdp-0.10.0/pdp/inst/doc/faster-pdp.html |only pdp-0.10.0/pdp/inst/doc/ice-curves.R |only pdp-0.10.0/pdp/inst/doc/ice-curves.Rmd |only pdp-0.10.0/pdp/inst/doc/ice-curves.html |only pdp-0.10.0/pdp/inst/doc/pdp.R |only pdp-0.10.0/pdp/inst/doc/pdp.Rmd |only pdp-0.10.0/pdp/inst/doc/pdp.html |only pdp-0.10.0/pdp/inst/tinytest/test_batch_size.R |only pdp-0.10.0/pdp/inst/tinytest/test_issues.R |only pdp-0.10.0/pdp/inst/tinytest/test_pkg_MASS.R | 16 - pdp-0.10.0/pdp/inst/tinytest/test_pkg_gbm.R |only pdp-0.10.0/pdp/inst/tinytest/test_pkg_party.R | 24 - pdp-0.10.0/pdp/inst/tinytest/test_pkg_stats.R | 16 - pdp-0.10.0/pdp/inst/tinytest/test_pkg_xgboost.R | 18 - pdp-0.10.0/pdp/inst/tinytest/test_plot.R |only pdp-0.10.0/pdp/man/boston.Rd | 36 +- pdp-0.10.0/pdp/man/exemplar.Rd | 21 + pdp-0.10.0/pdp/man/partial.Rd | 90 ++++-- pdp-0.10.0/pdp/man/pdp-package.Rd | 21 - pdp-0.10.0/pdp/man/pima.Rd | 51 ++- pdp-0.10.0/pdp/man/plot.partial.Rd |only pdp-0.10.0/pdp/man/plotPartial.Rd | 24 + pdp-0.10.0/pdp/man/trellis.last.object.Rd | 2 pdp-0.10.0/pdp/src/PartialGBM.cpp | 14 - pdp-0.10.0/pdp/vignettes/faster-pdp.Rmd |only pdp-0.10.0/pdp/vignettes/ice-curves.Rmd |only pdp-0.10.0/pdp/vignettes/pdp.Rmd |only pdp-0.8.3/pdp/R/autoplot.R |only pdp-0.8.3/pdp/R/topPredictors.R |only pdp-0.8.3/pdp/inst/doc/pdp-approximate.Rnw |only pdp-0.8.3/pdp/inst/doc/pdp-approximate.pdf |only pdp-0.8.3/pdp/inst/doc/pdp-intro.Rnw |only pdp-0.8.3/pdp/inst/doc/pdp-intro.pdf |only pdp-0.8.3/pdp/inst/doc/pdp-link-function.Rnw |only pdp-0.8.3/pdp/inst/doc/pdp-link-function.pdf |only pdp-0.8.3/pdp/man/autoplot.partial.Rd |only pdp-0.8.3/pdp/man/topPredictors.Rd |only pdp-0.8.3/pdp/vignettes/pdf |only pdp-0.8.3/pdp/vignettes/pdp-approximate.Rnw |only pdp-0.8.3/pdp/vignettes/pdp-intro.Rnw |only pdp-0.8.3/pdp/vignettes/pdp-link-function.Rnw |only pdp-0.8.3/pdp/vignettes/rmd |only 63 files changed, 1035 insertions(+), 863 deletions(-)
Title: Download Crypto Currency Data from 'CoinMarketCap' and
'CoinGecko'
Description: Retrieves crypto currency information and historical prices as well as information on the exchanges they are listed on. Historical data contains daily open, high, low and close values for all crypto currencies. The package draws on two complementary sources: 'CoinMarketCap' <https://coinmarketcap.com> (primary, via the 'crypto_*' functions) and 'CoinGecko' <https://www.coingecko.com> (secondary, via the 'cg_*' functions). Both sources are queried without an 'API' key; the two function families return tibbles with identical column conventions so downstream pipelines work on either source.
Author: Sebastian Stoeckl [aut, cre] ,
Jesse Vent [ctb]
Maintainer: Sebastian Stoeckl <sebastian.stoeckl@uni.li>
Diff between crypto2 versions 2.0.5 dated 2025-09-11 and 3.0.0 dated 2026-10-08
DESCRIPTION | 21 MD5 | 78 + NAMESPACE | 26 NEWS.md | 291 ++++-- R/cg_daily.R |only R/cg_extras.R |only R/cg_history.R |only R/cg_info.R |only R/cg_list.R |only R/cg_listings.R |only R/cg_recover.R |only R/crypto_crosswalk.R |only R/crypto_global_quotes.R | 2 R/crypto_history.R | 65 + R/crypto_info.R | 67 - R/crypto_listings.R | 444 +++++----- R/globals.R | 7 README.md | 231 ++--- build |only inst/CITATION | 6 inst/WORDLIST | 56 + inst/doc |only inst/extdata |only man/cg_history.Rd |only man/cg_history_by_id.Rd |only man/cg_id_mapping.Rd |only man/cg_info.Rd |only man/cg_list.Rd |only man/cg_listings.Rd |only man/crypto_crosswalk.Rd |only man/crypto_listings.Rd | 244 ++--- man/exchange_info.Rd | 118 +- man/safeFromJSON.Rd | 36 tests/testthat/helper-cg.R |only tests/testthat/test-cg-anomalies.R |only tests/testthat/test-cg-daily.R |only tests/testthat/test-cg-endpoints.R |only tests/testthat/test-cg-helpers.R |only tests/testthat/test-cg-listings.R |only tests/testthat/test-cg-mapping.R |only tests/testthat/test-cg-recover.R |only tests/testthat/test-cg-schema.R |only tests/testthat/test-cg-vs-cmc.R |only tests/testthat/test-crosswalk.R |only tests/testthat/test-crypto-info.R | 9 tests/testthat/test-listings.R | 145 ++- tests/testthat/test_data/crypto_history_reference.rds |binary tests/testthat/test_data/d9e71308b8f7d2956f6151a2ebf9423d.json | 2 tests/testthat/test_data/ex_info_reference.rds |binary tests/testthat/test_data/fcce7d762bbee082f65c377f184cd541.json | 2 tools |only vignettes |only 52 files changed, 1126 insertions(+), 724 deletions(-)
Title: Construct and Compare scGRN from Single-Cell Transcriptomic Data
Description: A workflow based on machine learning methods to construct and compare single-cell gene regulatory networks (scGRN) using single-cell RNA-seq (scRNA-seq) data collected from different conditions. Uses principal component regression, tensor decomposition, and manifold alignment, to accurately identify even subtly shifted gene expression programs. See <doi:10.1016/j.patter.2020.100139> for more details.
Author: Daniel Osorio [aut, cre] ,
Yan Zhong [aut, ctb],
Guanxun Li [aut, ctb],
Jianhua Huang [aut, ctb],
James Cai [aut, ctb, ths]
Maintainer: Daniel Osorio <dcosorioh@gmail.com>
Diff between scTenifoldNet versions 1.4 dated 2026-08-04 and 1.4.3 dated 2026-10-08
scTenifoldNet-1.4.3/scTenifoldNet/DESCRIPTION | 13 scTenifoldNet-1.4.3/scTenifoldNet/MD5 | 40 scTenifoldNet-1.4.3/scTenifoldNet/NAMESPACE | 14 scTenifoldNet-1.4.3/scTenifoldNet/R/checkMemory.R |only scTenifoldNet-1.4.3/scTenifoldNet/R/dRegulation.R | 16 scTenifoldNet-1.4.3/scTenifoldNet/R/makeNetworks.R | 4 scTenifoldNet-1.4.3/scTenifoldNet/R/pcNet.R | 774 ++++++---- scTenifoldNet-1.4.3/scTenifoldNet/R/restoreSeed.R |only scTenifoldNet-1.4.3/scTenifoldNet/R/scTenifoldNet.R | 32 scTenifoldNet-1.4.3/scTenifoldNet/R/tensorDecomposition.R | 11 scTenifoldNet-1.4.3/scTenifoldNet/README.md | 50 scTenifoldNet-1.4.3/scTenifoldNet/man/checkMemory.Rd |only scTenifoldNet-1.4.3/scTenifoldNet/man/dRegulation.Rd | 6 scTenifoldNet-1.4.3/scTenifoldNet/man/makeNetworks.Rd | 2 scTenifoldNet-1.4.3/scTenifoldNet/man/pcNet.Rd | 119 - scTenifoldNet-1.4.3/scTenifoldNet/man/scTenifoldNet.Rd | 7 scTenifoldNet-1.4.3/scTenifoldNet/man/tensorDecomposition.Rd | 5 scTenifoldNet-1.4.3/scTenifoldNet/tests/testthat/test-checkMemory.R |only scTenifoldNet-1.4.3/scTenifoldNet/tests/testthat/test-dRegulation.R |only scTenifoldNet-1.4.3/scTenifoldNet/tests/testthat/test-pcNet.R | 38 scTenifoldNet-1.4/scTenifoldNet/R/RcppExports.R |only scTenifoldNet-1.4/scTenifoldNet/man/pcNetCoreRcpp.Rd |only scTenifoldNet-1.4/scTenifoldNet/src |only scTenifoldNet-1.4/scTenifoldNet/tests/testthat/test-pcNetRcpp.R |only 24 files changed, 727 insertions(+), 404 deletions(-)
Title: SQL Parsing, Analysis and Dialect Translation
Description: Parse, tokenize, validate, format, analyze and translate SQL
between more than 30 dialects ('PostgreSQL', 'MySQL', 'BigQuery',
'Snowflake', 'DuckDB', 'T-SQL', and others) using the 'polyglot-sql'
Rust crate <https://github.com/tobilg/polyglot>, a Rust port of the
'SQLGlot' 'Python' library. All processing happens locally in the R
session; no database connection, 'Python' runtime or external service
is required. Includes column-level lineage, structural query
analysis, query optimization, 'AST' diffing and 'OpenLineage' facet
generation.
Author: Andre Leite [aut, cre] ,
Marcos Wasiliew [aut] ,
Hugo Vasconcelos [aut] ,
Carlos Amorim [aut] ,
Diogo Bezerra [aut] ,
Julia Nascimento Barreto [aut] ,
Tobias Mueller [cph] ),
Toby Mao [cph] ,
The authors of the vendored Rust dependencies [cph]
Maintainer: Andre Leite <leite@castlab.org>
Diff between polyglotSQL versions 0.1.1 dated 2026-09-27 and 0.1.2 dated 2026-10-08
DESCRIPTION | 21 +++++++---- MD5 | 19 +++++----- NEWS.md | 18 ++++++++++ README.md | 2 + inst/doc/getting-started.html | 2 - man/polyglotSQL-package.Rd | 7 ++- src/Makevars.in | 3 + src/entrypoint.c | 64 ++++++++++++++++++++++++++++++++++++ src/rust/Cargo.toml | 9 +++-- tests/testthat/test-compiled-code.R |only tools/config.R | 48 ++++++++++++++++++++++++++- 11 files changed, 168 insertions(+), 25 deletions(-)
Title: Generalized Latent Markov Models
Description: Latent Markov models for longitudinal continuous and categorical data. See Bartolucci, Pandolfi, Pennoni (2017)<doi:10.18637/jss.v081.i04>.
Author: Francesco Bartolucci [aut, cre],
Silvia Pandolfi [aut],
Fulvia Pennoni [aut],
Luca Brusa [ctb],
Alessio Farcomeni [ctb],
Alessio Serafini [ctb]
Maintainer: Francesco Bartolucci <francesco.bartolucci@unipg.it>
Diff between LMest versions 3.2.8 dated 2026-01-14 and 4.0.0 dated 2026-10-08
DESCRIPTION | 16 +++-- MD5 | 72 ++++++++++++++++--------- NAMESPACE | 24 ++------ R/backward_Multinom.R |only R/comp_PI.R |only R/comp_Piv.R |only R/comp_sc_PI.R |only R/comp_sc_Piv.R |only R/design_matrices.R |only R/est_LM_cat_multinom.R |only R/forward_Multinom.R |only R/mc_multinom.R |only R/print.R | 26 +++++++++ R/summary.LM_cat_multinom.R |only R/summary.mc_multinom.R |only build/vignette.rds |binary inst/doc/vignetteLMest.R | 32 ++++++++++- inst/doc/vignetteLMest.Rmd | 69 ++++++++++++++++++------ inst/doc/vignetteLMest.html | 122 ++++++++++++++++++++++++++++---------------- man/LMbasic-class.Rd | 2 man/LMest-package.Rd | 8 +- man/RLMSlong.Rd | 2 man/bootstrap.Rd | 6 +- man/data_employment_sim.Rd | 2 man/data_heart_sim.Rd | 8 +- man/data_market_sim.Rd | 6 +- man/design_matrices.Rd |only man/draw.Rd | 6 -- man/est_LM_cat_multinom.Rd |only man/est_lm_cov_latent.Rd | 6 +- man/est_lm_cov_manifest.Rd | 3 - man/lmest.Rd | 8 +- man/lmestCont.Rd | 8 +- man/lmestMc.Rd | 10 +-- man/lmestSearch.Rd | 4 - man/mc_multinom.Rd |only man/print.Rd | 9 ++- man/summary.Rd | 6 +- src/LMest_init.c | 38 +++++++++---- src/backward.f |only src/backward_multinom.f |only src/comp_PI.f |only src/comp_Piv.f |only src/comp_sc_PI.f |only src/comp_sc_Piv.f |only src/forward.f |only src/forward_multinom.f |only vignettes/vignetteLMest.Rmd | 69 ++++++++++++++++++------ 48 files changed, 378 insertions(+), 184 deletions(-)
Title: Fast Survival Analysis and Simulation for Clinical Trials
Description: Provides fast alternatives to standard survival analysis functions
in the 'survival' package, together with tools for time-to-event trial
simulation and sequential analysis. The estimation and testing functions
cover a single-time-point Kaplan-Meier estimator (survfit_fast()), log-rank
tests including weighted and stratified variants (survdiff_fast()), a
closed-form hazard ratio estimator based on the Pike-Halley Estimator method
(coxph_fast()), restricted mean survival time (rmst_fast()), window mean
survival time (wmst_fast()), milestone survival comparison
(milestone_fast()), median survival time (medsurv_fast()), the max-combo
test (maxcombo_fast()), the robust modestly-weighted log-rank test
(rmw_fast()), the weighted Kaplan-Meier (Pepe-Fleming) test (wkm_fast()),
the average hazard with survival weight (ahsw_fast()), and the
Kalbfleisch-Prentice average hazard ratio (ahr_fast()). The simulation
layer generates individual patient data (simdata_fast()), determines the
calendar time [...truncated...]
Author: Gosuke Homma [aut, cre]
Maintainer: Gosuke Homma <my.name.is.gosuke@gmail.com>
Diff between FastSurvival versions 1.0.0 dated 2026-09-29 and 1.1.0 dated 2026-10-08
DESCRIPTION | 18 - MD5 | 230 +++++++++++-------- NAMESPACE | 2 NEWS.md | 237 ++++++++++++++++++++ R/FastSurvival-package.R | 17 + R/RcppExports.R | 12 - R/ahr_fast.R | 7 R/ahsw_fast.R | 7 R/analysis_fast.R | 205 +++++++++++++++-- R/check_presorted.R |only R/check_time_event.R | 7 R/coxph_fast.R | 40 +-- R/cutoff_fast.R |only R/kmcurve_fast.R | 4 R/maxcombo_fast.R | 10 R/medsurv_fast.R | 2 R/milestone_fast.R | 17 + R/pairwise_fast.R | 144 +++++------- R/rmst_fast.R | 8 R/rmw_fast.R | 2 R/sim_key.R |only R/simdata_fast.R | 149 +++++++++++- R/simdata_fast_id_sub.R |only R/simsummary_fast.R | 4 R/survdiff_fast.R | 7 R/survfit_fast.R | 10 R/switch_fast.R |only R/wkm_fast.R | 2 R/wmst_fast.R | 2 README.md | 108 ++++++--- build/vignette.rds |binary inst/WORDLIST | 20 + inst/doc/FastSurvival.R | 2 inst/doc/FastSurvival.Rmd | 28 +- inst/doc/FastSurvival.html | 128 +++++------ inst/doc/compare-logrank-rmst.R | 8 inst/doc/compare-logrank-rmst.Rmd | 12 - inst/doc/compare-logrank-rmst.html | 30 +- inst/doc/correlated-pfs-os-gsd.R | 110 +++------ inst/doc/correlated-pfs-os-gsd.Rmd | 173 ++++++-------- inst/doc/correlated-pfs-os-gsd.html | 267 +++++++++++------------ inst/doc/external-data.R |only inst/doc/external-data.Rmd |only inst/doc/external-data.html |only inst/doc/group-sequential-design.R | 199 ++++++++++------- inst/doc/group-sequential-design.Rmd | 233 +++++++++++--------- inst/doc/group-sequential-design.html | 325 ++++++++++++++++------------ inst/doc/investigate-freidlin-and-korn.R | 39 +-- inst/doc/investigate-freidlin-and-korn.Rmd | 61 ++--- inst/doc/investigate-freidlin-and-korn.html | 148 ++++++------ inst/doc/mrct-regional-consistency.R | 3 inst/doc/mrct-regional-consistency.Rmd | 22 - inst/doc/mrct-regional-consistency.html | 157 ++++++------- inst/doc/multi-arm-pairwise.R | 30 +- inst/doc/multi-arm-pairwise.Rmd | 54 +++- inst/doc/multi-arm-pairwise.html | 76 ++++-- inst/doc/speed-comparison.Rmd | 48 +++- inst/doc/speed-comparison.html | 59 ++++- inst/doc/treatment-switching.R |only inst/doc/treatment-switching.Rmd |only inst/doc/treatment-switching.html |only inst/doc/validation.R | 42 +++ inst/doc/validation.Rmd | 135 +++++++++-- inst/doc/validation.html | 187 +++++++++++----- man/FastSurvival-package.Rd | 17 + man/ahr_fast.Rd | 3 man/ahsw_fast.Rd | 8 man/analysis_fast.Rd | 95 ++++++-- man/coxph_fast.Rd | 37 +-- man/cutoff_fast.Rd |only man/maxcombo_fast.Rd | 11 man/medsurv_fast.Rd | 3 man/milestone_fast.Rd | 8 man/pairwise_fast.Rd | 36 ++- man/rmst_fast.Rd | 6 man/rmw_fast.Rd | 3 man/simdata_fast.Rd | 111 ++++++++- man/simsummary_fast.Rd | 4 man/survdiff_fast.Rd | 5 man/survfit_fast.Rd | 10 man/switch_fast.Rd |only man/wkm_fast.Rd | 3 man/wmst_fast.Rd | 3 src/RcppExports.cpp | 58 ++++ src/analysis_loop_core.cpp | 19 + src/cutoff_core.cpp |only src/simdata_core_full.cpp | 29 ++ src/simdata_core_id.cpp | 299 +++++++++++++++++++++++++ src/wkm_core.cpp | 16 + tests/testthat/test-ahr_fast.R | 12 + tests/testthat/test-ahsw_fast.R | 7 tests/testthat/test-analysis_fast.R | 158 +++++++++++++ tests/testthat/test-coxph_fast.R | 9 tests/testthat/test-cutoff_fast.R |only tests/testthat/test-gen_scenario_fast.R |only tests/testthat/test-kmcurve_fast.R | 7 tests/testthat/test-maxcombo_fast.R | 7 tests/testthat/test-medsurv_fast.R | 7 tests/testthat/test-milestone_fast.R | 38 +++ tests/testthat/test-pairwise_fast.R | 71 +++++- tests/testthat/test-plot.scenario_fast.R |only tests/testthat/test-print.ahr_fast.R |only tests/testthat/test-print.ahsw_fast.R |only tests/testthat/test-print.maxcombo_fast.R |only tests/testthat/test-print.medsurv_fast.R |only tests/testthat/test-print.rmst_fast.R |only tests/testthat/test-print.rmw_fast.R |only tests/testthat/test-print.scenario_fast.R |only tests/testthat/test-print.survfit_fast.R |only tests/testthat/test-print.wkm_fast.R |only tests/testthat/test-print.wmst_fast.R |only tests/testthat/test-rmst_fast.R | 8 tests/testthat/test-rmw_fast.R | 7 tests/testthat/test-simdata_fast.R | 91 +++++++ tests/testthat/test-simdata_fast_id.R | 144 ++++++++++++ tests/testthat/test-survdiff_fast.R | 23 + tests/testthat/test-survfit_fast.R | 5 tests/testthat/test-switch_fast.R |only tests/testthat/test-wkm_fast.R | 61 ++++- tests/testthat/test-wmst_fast.R | 7 vignettes/FastSurvival.Rmd | 28 +- vignettes/compare-logrank-rmst.Rmd | 12 - vignettes/correlated-pfs-os-gsd.Rmd | 173 ++++++-------- vignettes/external-data.Rmd |only vignettes/group-sequential-design.Rmd | 233 +++++++++++--------- vignettes/investigate-freidlin-and-korn.Rmd | 61 ++--- vignettes/mrct-regional-consistency.Rmd | 22 - vignettes/multi-arm-pairwise.Rmd | 54 +++- vignettes/speed-comparison.Rmd | 48 +++- vignettes/treatment-switching.Rmd |only vignettes/validation.Rmd | 135 +++++++++-- 131 files changed, 4261 insertions(+), 1798 deletions(-)
Title: Read and Manipulate Video Subtitles
Description: A collection of functions to read, write and manipulate video
subtitles. Supported formats include 'srt', 'subrip', 'sub', 'subviewer',
'microdvd', 'ssa', 'ass', 'substation', 'vtt', and 'webvtt'.
Author: Francois Keck [aut, cre, cph] ,
Bob Rudis [ctb] ,
Alban Sagouis [ctb]
Maintainer: Francois Keck <francois.keck@gmail.com>
Diff between subtools versions 1.1.0 dated 2026-03-24 and 1.1.1 dated 2026-10-08
DESCRIPTION | 8 +-- MD5 | 26 +++++------ NEWS.md | 6 ++ R/read_subtitles.R | 58 +++++++++++++++++++----- R/utils_regexes.R | 42 ++++++++++++++++++ README.md | 77 +++++++++++++++++++++++---------- build/vignette.rds |binary inst/doc/subtools-text-analysis.html | 6 +- man/as_subtitle.Rd | 2 man/read_subtitles.Rd | 12 +++-- tests/testthat/_snaps/unnest_tokens.md | 2 tests/testthat/test_read.R | 16 ++++++ tests/testthat/test_unnest_tokens.R | 2 tests/testthat/test_utils_regex.R | 2 14 files changed, 197 insertions(+), 62 deletions(-)
Title: Tidy Tools for Joinpoint Regression Models
Description: Provides tools to fit joinpoint regression models with a log-linear specification by levels of one or two categorical variable(s) using the grid-search method. It includes functions to estimate the Annual Percent Change (APC) and the Average Annual Percent Change (AAPC), along with their 95% confidence intervals, and to generate formatted summary tables and plots of results.
Author: Tamara Ricardo [aut, cre]
Maintainer: Tamara Ricardo <tamararicardo83@gmail.com>
Diff between joinpointR versions 1.1.0 dated 2026-07-20 and 2.0.0 dated 2026-10-08
joinpointR-1.1.0/joinpointR/R/as_ft_jp.R |only joinpointR-1.1.0/joinpointR/R/get_aapc.R |only joinpointR-1.1.0/joinpointR/R/get_apc.R |only joinpointR-1.1.0/joinpointR/R/model_jp.R |only joinpointR-1.1.0/joinpointR/R/summary_jp.R |only joinpointR-1.1.0/joinpointR/R/utils.R |only joinpointR-1.1.0/joinpointR/inst/doc/introduction.R |only joinpointR-1.1.0/joinpointR/inst/doc/introduction.Rmd |only joinpointR-1.1.0/joinpointR/inst/doc/introduction.html |only joinpointR-1.1.0/joinpointR/man/get_aapc.Rd |only joinpointR-1.1.0/joinpointR/man/get_apc.Rd |only joinpointR-1.1.0/joinpointR/man/jp_to_ft.Rd |only joinpointR-1.1.0/joinpointR/man/summary_jp.Rd |only joinpointR-1.1.0/joinpointR/vignettes/introduction.Rmd |only joinpointR-2.0.0/joinpointR/DESCRIPTION | 27 joinpointR-2.0.0/joinpointR/LICENSE | 4 joinpointR-2.0.0/joinpointR/MD5 | 61 - joinpointR-2.0.0/joinpointR/NAMESPACE | 32 joinpointR-2.0.0/joinpointR/NEWS.md | 46 - joinpointR-2.0.0/joinpointR/R/bic_jp.R |only joinpointR-2.0.0/joinpointR/R/clean_jp_data.R |only joinpointR-2.0.0/joinpointR/R/get_summary.R |only joinpointR-2.0.0/joinpointR/R/gg_jpoint.R | 600 ++++++++++------- joinpointR-2.0.0/joinpointR/R/globals.R | 2 joinpointR-2.0.0/joinpointR/R/hiv_data.R | 22 joinpointR-2.0.0/joinpointR/R/model_jp_grid.R |only joinpointR-2.0.0/joinpointR/R/plot_cbpal.R |only joinpointR-2.0.0/joinpointR/R/scale_cbpal_color.R |only joinpointR-2.0.0/joinpointR/R/sysdata.rda |only joinpointR-2.0.0/joinpointR/README.md | 178 ++--- joinpointR-2.0.0/joinpointR/build/vignette.rds |binary joinpointR-2.0.0/joinpointR/data/hiv_data.rda |binary joinpointR-2.0.0/joinpointR/inst/doc/Introduction.R |only joinpointR-2.0.0/joinpointR/inst/doc/Introduction.Rmd |only joinpointR-2.0.0/joinpointR/inst/doc/Introduction.html |only joinpointR-2.0.0/joinpointR/man/bic_jp.Rd |only joinpointR-2.0.0/joinpointR/man/clean_jp_data.Rd |only joinpointR-2.0.0/joinpointR/man/figures/logo.png |binary joinpointR-2.0.0/joinpointR/man/get_summary.Rd |only joinpointR-2.0.0/joinpointR/man/gg_jpoint.Rd | 193 ++--- joinpointR-2.0.0/joinpointR/man/hiv_data.Rd | 54 - joinpointR-2.0.0/joinpointR/man/model_jp.Rd | 214 +++--- joinpointR-2.0.0/joinpointR/man/plot_cbpal.Rd |only joinpointR-2.0.0/joinpointR/man/scale_cbpal.Rd |only joinpointR-2.0.0/joinpointR/man/summary.model_jp.Rd |only joinpointR-2.0.0/joinpointR/tests |only joinpointR-2.0.0/joinpointR/vignettes/Introduction.Rmd |only 47 files changed, 782 insertions(+), 651 deletions(-)
Title: Amazon Web Services Software Development Kit
Description: Interface to Amazon Web Services <https://aws.amazon.com>,
including storage, database, and compute services, such as 'Simple
Storage Service' ('S3'), 'DynamoDB' 'NoSQL' database, and 'Lambda'
functions-as-a-service.
Author: David Kretch [aut],
Adam Banker [aut],
Dyfan Jones [cre],
Amazon.com, Inc. [cph]
Maintainer: Dyfan Jones <dyfan.r.jones@gmail.com>
Diff between paws versions 0.10.0 dated 2026-06-01 and 0.11.0 dated 2026-10-08
paws-0.10.0/paws/man/panorama.Rd |only paws-0.11.0/paws/DESCRIPTION | 25 paws-0.11.0/paws/MD5 | 565 +- paws-0.11.0/paws/NAMESPACE | 19 paws-0.11.0/paws/R/paws.R | 2315 ++++++++--- paws-0.11.0/paws/man/accessanalyzer.Rd | 4 paws-0.11.0/paws/man/account.Rd | 9 paws-0.11.0/paws/man/acm.Rd | 29 paws-0.11.0/paws/man/acmpca.Rd | 4 paws-0.11.0/paws/man/apigateway.Rd | 4 paws-0.11.0/paws/man/apigatewaymanagementapi.Rd | 4 paws-0.11.0/paws/man/apigatewayv2.Rd | 4 paws-0.11.0/paws/man/appfabric.Rd | 4 paws-0.11.0/paws/man/applicationautoscaling.Rd | 4 paws-0.11.0/paws/man/applicationcostprofiler.Rd | 4 paws-0.11.0/paws/man/applicationinsights.Rd | 4 paws-0.11.0/paws/man/appmesh.Rd | 4 paws-0.11.0/paws/man/appregistry.Rd | 4 paws-0.11.0/paws/man/apprunner.Rd | 4 paws-0.11.0/paws/man/appstream.Rd | 4 paws-0.11.0/paws/man/arczonalshift.Rd | 4 paws-0.11.0/paws/man/athena.Rd | 4 paws-0.11.0/paws/man/auditmanager.Rd | 4 paws-0.11.0/paws/man/augmentedairuntime.Rd | 4 paws-0.11.0/paws/man/autoscaling.Rd | 4 paws-0.11.0/paws/man/autoscalingplans.Rd | 4 paws-0.11.0/paws/man/backup.Rd | 20 paws-0.11.0/paws/man/backupgateway.Rd | 4 paws-0.11.0/paws/man/batch.Rd | 7 paws-0.11.0/paws/man/bedrock.Rd | 16 paws-0.11.0/paws/man/bedrockagent.Rd | 15 paws-0.11.0/paws/man/bedrockagentcore.Rd | 6 paws-0.11.0/paws/man/bedrockagentcorecontrol.Rd | 48 paws-0.11.0/paws/man/bedrockagentruntime.Rd | 14 paws-0.11.0/paws/man/bedrockdataautomation.Rd | 4 paws-0.11.0/paws/man/bedrockdataautomationruntime.Rd | 4 paws-0.11.0/paws/man/bedrockruntime.Rd | 5 paws-0.11.0/paws/man/billing.Rd | 15 paws-0.11.0/paws/man/billingconductor.Rd | 6 paws-0.11.0/paws/man/braket.Rd | 6 paws-0.11.0/paws/man/budgets.Rd | 4 paws-0.11.0/paws/man/chatbot.Rd | 4 paws-0.11.0/paws/man/cleanroomsml.Rd | 4 paws-0.11.0/paws/man/cloud9.Rd | 4 paws-0.11.0/paws/man/cloudcontrolapi.Rd | 4 paws-0.11.0/paws/man/clouddirectory.Rd | 6 paws-0.11.0/paws/man/cloudformation.Rd | 6 paws-0.11.0/paws/man/cloudfront.Rd | 4 paws-0.11.0/paws/man/cloudfrontkeyvaluestore.Rd | 4 paws-0.11.0/paws/man/cloudhsm.Rd | 4 paws-0.11.0/paws/man/cloudhsmv2.Rd | 4 paws-0.11.0/paws/man/cloudsearch.Rd | 4 paws-0.11.0/paws/man/cloudsearchdomain.Rd | 4 paws-0.11.0/paws/man/cloudtrail.Rd | 70 paws-0.11.0/paws/man/cloudtraildataservice.Rd | 4 paws-0.11.0/paws/man/cloudwatch.Rd | 51 paws-0.11.0/paws/man/cloudwatchapplicationsignals.Rd | 13 paws-0.11.0/paws/man/cloudwatchinternetmonitor.Rd | 4 paws-0.11.0/paws/man/cloudwatchlogs.Rd | 19 paws-0.11.0/paws/man/cloudwatchobservabilityaccessmanager.Rd | 4 paws-0.11.0/paws/man/cloudwatchrum.Rd | 4 paws-0.11.0/paws/man/codeartifact.Rd | 4 paws-0.11.0/paws/man/codebuild.Rd | 4 paws-0.11.0/paws/man/codecatalyst.Rd | 4 paws-0.11.0/paws/man/codecommit.Rd | 6 paws-0.11.0/paws/man/codeconnections.Rd | 4 paws-0.11.0/paws/man/codedeploy.Rd | 4 paws-0.11.0/paws/man/codeguruprofiler.Rd | 4 paws-0.11.0/paws/man/codegurureviewer.Rd | 4 paws-0.11.0/paws/man/codegurusecurity.Rd | 4 paws-0.11.0/paws/man/codepipeline.Rd | 4 paws-0.11.0/paws/man/codestarconnections.Rd | 4 paws-0.11.0/paws/man/codestarnotifications.Rd | 4 paws-0.11.0/paws/man/cognitoidentity.Rd | 4 paws-0.11.0/paws/man/cognitoidentityprovider.Rd | 14 paws-0.11.0/paws/man/cognitosync.Rd | 4 paws-0.11.0/paws/man/comprehend.Rd | 4 paws-0.11.0/paws/man/comprehendmedical.Rd | 4 paws-0.11.0/paws/man/computeoptimizer.Rd | 4 paws-0.11.0/paws/man/configservice.Rd | 9 paws-0.11.0/paws/man/connect.Rd | 40 paws-0.11.0/paws/man/connectcampaignservice.Rd | 4 paws-0.11.0/paws/man/connectcampaignservicev2.Rd | 4 paws-0.11.0/paws/man/connectcases.Rd | 4 paws-0.11.0/paws/man/connectcontactlens.Rd | 6 paws-0.11.0/paws/man/connectparticipant.Rd | 8 paws-0.11.0/paws/man/connectwisdomservice.Rd | 4 paws-0.11.0/paws/man/controltower.Rd | 4 paws-0.11.0/paws/man/costandusagereportservice.Rd | 4 paws-0.11.0/paws/man/costexplorer.Rd | 4 paws-0.11.0/paws/man/customerprofiles.Rd | 13 paws-0.11.0/paws/man/datapipeline.Rd | 4 paws-0.11.0/paws/man/datazone.Rd | 6 paws-0.11.0/paws/man/dax.Rd | 4 paws-0.11.0/paws/man/detective.Rd | 4 paws-0.11.0/paws/man/devopsguru.Rd | 4 paws-0.11.0/paws/man/directconnect.Rd | 14 paws-0.11.0/paws/man/directoryservice.Rd | 4 paws-0.11.0/paws/man/dlm.Rd | 4 paws-0.11.0/paws/man/docdb.Rd | 4 paws-0.11.0/paws/man/docdbelastic.Rd | 4 paws-0.11.0/paws/man/drs.Rd | 24 paws-0.11.0/paws/man/dynamodb.Rd | 5 paws-0.11.0/paws/man/dynamodbstreams.Rd | 4 paws-0.11.0/paws/man/ebs.Rd | 4 paws-0.11.0/paws/man/ec2.Rd | 50 paws-0.11.0/paws/man/ec2instanceconnect.Rd | 4 paws-0.11.0/paws/man/ecr.Rd | 4 paws-0.11.0/paws/man/ecrpublic.Rd | 4 paws-0.11.0/paws/man/ecs.Rd | 4 paws-0.11.0/paws/man/efs.Rd | 4 paws-0.11.0/paws/man/eks.Rd | 10 paws-0.11.0/paws/man/elasticache.Rd | 4 paws-0.11.0/paws/man/elasticbeanstalk.Rd | 36 paws-0.11.0/paws/man/elasticsearchservice.Rd | 4 paws-0.11.0/paws/man/elb.Rd | 6 paws-0.11.0/paws/man/elbv2.Rd | 6 paws-0.11.0/paws/man/emr.Rd | 9 paws-0.11.0/paws/man/emrcontainers.Rd | 8 paws-0.11.0/paws/man/emrserverless.Rd | 4 paws-0.11.0/paws/man/entityresolution.Rd | 4 paws-0.11.0/paws/man/eventbridge.Rd | 4 paws-0.11.0/paws/man/eventbridgepipes.Rd | 4 paws-0.11.0/paws/man/eventbridgescheduler.Rd | 4 paws-0.11.0/paws/man/finspace.Rd | 4 paws-0.11.0/paws/man/finspacedata.Rd | 4 paws-0.11.0/paws/man/firehose.Rd | 4 paws-0.11.0/paws/man/fis.Rd | 4 paws-0.11.0/paws/man/fms.Rd | 4 paws-0.11.0/paws/man/forecastqueryservice.Rd | 4 paws-0.11.0/paws/man/forecastservice.Rd | 4 paws-0.11.0/paws/man/frauddetector.Rd | 4 paws-0.11.0/paws/man/fsx.Rd | 4 paws-0.11.0/paws/man/glacier.Rd | 4 paws-0.11.0/paws/man/globalaccelerator.Rd | 4 paws-0.11.0/paws/man/glue.Rd | 45 paws-0.11.0/paws/man/gluedatabrew.Rd | 4 paws-0.11.0/paws/man/guardduty.Rd | 19 paws-0.11.0/paws/man/health.Rd | 5 paws-0.11.0/paws/man/healthlake.Rd | 23 paws-0.11.0/paws/man/iam.Rd | 8 paws-0.11.0/paws/man/iamrolesanywhere.Rd | 4 paws-0.11.0/paws/man/identitystore.Rd | 17 paws-0.11.0/paws/man/imagebuilder.Rd | 86 paws-0.11.0/paws/man/inspector.Rd | 6 paws-0.11.0/paws/man/inspector2.Rd | 14 paws-0.11.0/paws/man/ivs.Rd | 7 paws-0.11.0/paws/man/ivschat.Rd | 6 paws-0.11.0/paws/man/ivsrealtime.Rd | 4 paws-0.11.0/paws/man/kafka.Rd | 9 paws-0.11.0/paws/man/kafkaconnect.Rd | 5 paws-0.11.0/paws/man/kendra.Rd | 4 paws-0.11.0/paws/man/kendraranking.Rd | 4 paws-0.11.0/paws/man/keyspaces.Rd | 4 paws-0.11.0/paws/man/kinesis.Rd | 10 paws-0.11.0/paws/man/kinesisanalytics.Rd | 4 paws-0.11.0/paws/man/kinesisanalyticsv2.Rd | 4 paws-0.11.0/paws/man/kms.Rd | 4 paws-0.11.0/paws/man/lakeformation.Rd | 4 paws-0.11.0/paws/man/lambda.Rd | 7 paws-0.11.0/paws/man/lexmodelbuildingservice.Rd | 4 paws-0.11.0/paws/man/lexmodelsv2.Rd | 33 paws-0.11.0/paws/man/lexruntimeservice.Rd | 4 paws-0.11.0/paws/man/lexruntimev2.Rd | 4 paws-0.11.0/paws/man/licensemanager.Rd | 4 paws-0.11.0/paws/man/licensemanagerlinuxsubscriptions.Rd | 4 paws-0.11.0/paws/man/licensemanagerusersubscriptions.Rd | 4 paws-0.11.0/paws/man/lightsail.Rd | 5 paws-0.11.0/paws/man/locationservice.Rd | 4 paws-0.11.0/paws/man/lookoutequipment.Rd | 4 paws-0.11.0/paws/man/machinelearning.Rd | 4 paws-0.11.0/paws/man/macie2.Rd | 4 paws-0.11.0/paws/man/managedgrafana.Rd | 4 paws-0.11.0/paws/man/marketplacecatalog.Rd | 6 paws-0.11.0/paws/man/marketplacecommerceanalytics.Rd | 4 paws-0.11.0/paws/man/marketplaceentitlementservice.Rd | 4 paws-0.11.0/paws/man/marketplacemetering.Rd | 8 paws-0.11.0/paws/man/memorydb.Rd | 4 paws-0.11.0/paws/man/mq.Rd | 5 paws-0.11.0/paws/man/mturk.Rd | 4 paws-0.11.0/paws/man/mwaa.Rd | 4 paws-0.11.0/paws/man/neptune.Rd | 4 paws-0.11.0/paws/man/neptunedata.Rd | 4 paws-0.11.0/paws/man/networkfirewall.Rd | 12 paws-0.11.0/paws/man/networkmanager.Rd | 4 paws-0.11.0/paws/man/omics.Rd | 4 paws-0.11.0/paws/man/opensearchingestion.Rd | 4 paws-0.11.0/paws/man/opensearchservice.Rd | 12 paws-0.11.0/paws/man/opensearchserviceserverless.Rd | 4 paws-0.11.0/paws/man/organizations.Rd | 30 paws-0.11.0/paws/man/paymentcryptographycontrolplane.Rd | 4 paws-0.11.0/paws/man/paymentcryptographydataplane.Rd | 6 paws-0.11.0/paws/man/pcaconnectorad.Rd | 4 paws-0.11.0/paws/man/personalize.Rd | 4 paws-0.11.0/paws/man/personalizeevents.Rd | 4 paws-0.11.0/paws/man/personalizeruntime.Rd | 4 paws-0.11.0/paws/man/pi.Rd | 4 paws-0.11.0/paws/man/pinpoint.Rd | 4 paws-0.11.0/paws/man/pinpointemail.Rd | 4 paws-0.11.0/paws/man/pinpointsmsvoice.Rd | 4 paws-0.11.0/paws/man/pinpointsmsvoicev2.Rd | 8 paws-0.11.0/paws/man/polly.Rd | 4 paws-0.11.0/paws/man/pricing.Rd | 4 paws-0.11.0/paws/man/prometheusservice.Rd | 6 paws-0.11.0/paws/man/proton.Rd | 4 paws-0.11.0/paws/man/quicksight.Rd | 71 paws-0.11.0/paws/man/ram.Rd | 4 paws-0.11.0/paws/man/rds.Rd | 4 paws-0.11.0/paws/man/rdsdataservice.Rd | 8 paws-0.11.0/paws/man/recyclebin.Rd | 4 paws-0.11.0/paws/man/redshift.Rd | 8 paws-0.11.0/paws/man/redshiftdataapiservice.Rd | 5 paws-0.11.0/paws/man/redshiftserverless.Rd | 4 paws-0.11.0/paws/man/rekognition.Rd | 45 paws-0.11.0/paws/man/resiliencehub.Rd | 4 paws-0.11.0/paws/man/resourceexplorer.Rd | 4 paws-0.11.0/paws/man/resourcegroups.Rd | 4 paws-0.11.0/paws/man/resourcegroupstaggingapi.Rd | 4 paws-0.11.0/paws/man/route53.Rd | 4 paws-0.11.0/paws/man/route53domains.Rd | 4 paws-0.11.0/paws/man/route53profiles.Rd | 4 paws-0.11.0/paws/man/route53recoverycluster.Rd | 4 paws-0.11.0/paws/man/route53recoverycontrolconfig.Rd | 4 paws-0.11.0/paws/man/route53recoveryreadiness.Rd | 4 paws-0.11.0/paws/man/route53resolver.Rd | 10 paws-0.11.0/paws/man/s3.Rd | 26 paws-0.11.0/paws/man/s3control.Rd | 4 paws-0.11.0/paws/man/s3outposts.Rd | 4 paws-0.11.0/paws/man/s3tables.Rd | 4 paws-0.11.0/paws/man/sagemaker.Rd | 12 paws-0.11.0/paws/man/sagemakeredgemanager.Rd | 4 paws-0.11.0/paws/man/sagemakerfeaturestoreruntime.Rd | 9 paws-0.11.0/paws/man/sagemakergeospatialcapabilities.Rd | 4 paws-0.11.0/paws/man/sagemakermetrics.Rd | 4 paws-0.11.0/paws/man/sagemakerruntime.Rd | 4 paws-0.11.0/paws/man/savingsplans.Rd | 4 paws-0.11.0/paws/man/schemas.Rd | 4 paws-0.11.0/paws/man/secretsmanager.Rd | 4 paws-0.11.0/paws/man/securityhub.Rd | 14 paws-0.11.0/paws/man/securitylake.Rd | 4 paws-0.11.0/paws/man/serverlessapplicationrepository.Rd | 4 paws-0.11.0/paws/man/servicecatalog.Rd | 4 paws-0.11.0/paws/man/servicediscovery.Rd | 4 paws-0.11.0/paws/man/servicequotas.Rd | 4 paws-0.11.0/paws/man/ses.Rd | 4 paws-0.11.0/paws/man/sesv2.Rd | 24 paws-0.11.0/paws/man/sfn.Rd | 4 paws-0.11.0/paws/man/shield.Rd | 4 paws-0.11.0/paws/man/simpledb.Rd | 4 paws-0.11.0/paws/man/sns.Rd | 8 paws-0.11.0/paws/man/sqs.Rd | 4 paws-0.11.0/paws/man/ssm.Rd | 12 paws-0.11.0/paws/man/ssmcontacts.Rd | 4 paws-0.11.0/paws/man/ssmincidents.Rd | 4 paws-0.11.0/paws/man/ssmsap.Rd | 4 paws-0.11.0/paws/man/sso.Rd | 4 paws-0.11.0/paws/man/ssoadmin.Rd | 4 paws-0.11.0/paws/man/ssooidc.Rd | 6 paws-0.11.0/paws/man/storagegateway.Rd | 4 paws-0.11.0/paws/man/sts.Rd | 12 paws-0.11.0/paws/man/support.Rd | 14 paws-0.11.0/paws/man/supportapp.Rd | 4 paws-0.11.0/paws/man/swf.Rd | 4 paws-0.11.0/paws/man/synthetics.Rd | 4 paws-0.11.0/paws/man/telconetworkbuilder.Rd | 4 paws-0.11.0/paws/man/textract.Rd | 4 paws-0.11.0/paws/man/timestreamquery.Rd | 4 paws-0.11.0/paws/man/timestreamwrite.Rd | 4 paws-0.11.0/paws/man/transcribeservice.Rd | 5 paws-0.11.0/paws/man/translate.Rd | 4 paws-0.11.0/paws/man/verifiedpermissions.Rd | 4 paws-0.11.0/paws/man/voiceid.Rd | 4 paws-0.11.0/paws/man/vpclattice.Rd | 4 paws-0.11.0/paws/man/waf.Rd | 4 paws-0.11.0/paws/man/wafregional.Rd | 4 paws-0.11.0/paws/man/wafv2.Rd | 8 paws-0.11.0/paws/man/wellarchitected.Rd | 35 paws-0.11.0/paws/man/workdocs.Rd | 4 paws-0.11.0/paws/man/workmail.Rd | 4 paws-0.11.0/paws/man/workmailmessageflow.Rd | 4 paws-0.11.0/paws/man/workspaces.Rd | 28 paws-0.11.0/paws/man/workspacesweb.Rd | 4 paws-0.11.0/paws/man/xray.Rd | 4 paws-0.11.0/paws/tests |only 284 files changed, 3676 insertions(+), 1417 deletions(-)
Title: Optimizing Acoustic Signal Detection
Description: Facilitates the automatic detection of acoustic signals,
providing functions to diagnose and optimize the performance of detection
routines. Detections from other software can also be explored and optimized.
This package has been peer-reviewed by rOpenSci.
Araya-Salas et al. (2022) <doi:10.1101/2022.12.13.520253>.
Author: Marcelo Araya-Salas [aut, cre] ,
Alec L. Robitaille [rev] ,
Sam Lapp [rev]
Maintainer: Marcelo Araya-Salas <marcelo.araya@ucr.ac.cr>
Diff between ohun versions 1.0.4 dated 2025-10-22 and 1.0.5 dated 2026-10-08
DESCRIPTION | 13 + MD5 | 121 ++++++++--------- NAMESPACE | 3 NEWS.md | 15 ++ R/consensus_detection.R | 21 +-- R/diagnose_detection.R | 30 ++-- R/energy_detector.R | 28 ++-- R/get_envelopes.R | 17 +- R/get_templates.R | 11 - R/internal_functions.R | 169 ++++++++++++++++-------- R/label_detection.R | 29 ++-- R/label_spectro.R | 63 ++++----- R/merge_overlaps.R | 9 - R/ohun-package.R | 7 - R/optimize_energy_detector.R | 34 ++--- R/optimize_template_detector.R | 10 - R/plot_detection.R | 16 +- R/reassemble_detection.R | 23 ++- R/split_acoustic_data.R | 34 ++--- R/summarize_acoustic_data.R | 9 - R/summarize_diagnostic.R | 17 +- R/summarize_reference.R | 8 - R/template_correlator.R | 20 +- R/template_detector.R | 95 ++++++++++--- README.md | 88 +++++++++++- build/vignette.rds |binary data/lbh1.rda |binary data/lbh2.rda |binary data/lbh_reference.rda |binary inst/doc/energy_based_detection.R | 32 +++- inst/doc/energy_based_detection.Rmd | 69 +++++----- inst/doc/energy_based_detection.html | 224 +++++++++++++++++---------------- inst/doc/intro_to_ohun.R | 13 - inst/doc/intro_to_ohun.Rmd | 59 ++++---- inst/doc/intro_to_ohun.html | 188 +++++++++++++++------------ inst/doc/template_based_detection.R | 8 - inst/doc/template_based_detection.Rmd | 43 +++--- inst/doc/template_based_detection.html | 216 ++++++++++++++++--------------- man/consensus_detection.Rd | 20 +- man/diagnose_detection.Rd | 16 +- man/energy_detector.Rd | 16 +- man/envelopes.Rd |only man/get_envelopes.Rd | 7 - man/get_templates.Rd | 7 - man/label_detection.Rd | 6 man/label_spectro.Rd | 16 +- man/merge_overlaps.Rd | 6 man/ohun.Rd | 4 man/optimize_energy_detector.Rd | 12 - man/optimize_template_detector.Rd | 6 man/plot_detection.Rd | 14 +- man/print.envelopes.Rd | 9 - man/reassemble_detection.Rd | 6 man/split_acoustic_data.Rd | 10 - man/summarize_acoustic_data.Rd | 2 man/summarize_diagnostic.Rd | 9 - man/summarize_reference.Rd | 8 - man/template_correlator.Rd | 12 - man/template_detector.Rd | 13 + vignettes/energy_based_detection.Rmd | 69 +++++----- vignettes/intro_to_ohun.Rmd | 59 ++++---- vignettes/template_based_detection.Rmd | 43 +++--- 62 files changed, 1185 insertions(+), 927 deletions(-)
Title: Unidimensional Item Response Theory Modeling
Description: Fit unidimensional item response theory (IRT) models to test
data, which includes both dichotomous and polytomous items, calibrate
pretest item parameters, estimate examinees' abilities, and examine
the IRT model-data fit on item-level in different ways as well as provide
useful functions related to IRT analyses such as differential item
functioning analysis.
In addition, the package provides a set of classical test theory functions
for computing item- and test-level statistics (e.g., item difficulty, item-total
correlation, and coefficient alpha) and for scoring and analyzing selected-response
item data.
The bring.flexmirt() and write.flexmirt() functions were written by modifying
the read.flexmirt() function (Pritikin & Falk (2020) <doi:10.1177/0146621620929431>).
The bring.bilog() and bring.parscale() functions were written by modifying the read.bilog()
and read.parscale() functions, respectively (Weeks (2010) <doi:10.18637/jss.v035.i12>).
The bisection() function wa [...truncated...]
Author: Hwanggyu Lim [aut, cre],
Craig S. Wells [ctb],
James Howard [ctb],
Joshua Pritikin [ctb],
Jonathan P Weeks [ctb],
Jorge Gonzalez [ctb],
David Magis [ctb]
Maintainer: Hwanggyu Lim <hglim83@gmail.com>
Diff between irtQ versions 1.3.0 dated 2026-10-05 and 1.3.1 dated 2026-10-08
DESCRIPTION | 8 MD5 | 114 +- NAMESPACE | 1 NEWS.md | 117 ++ R/cac_rud.R | 8 R/catsib.R | 14 R/ctt.R | 69 + R/ctt_alpha.R | 24 R/ctt_distr.R | 25 R/ctt_item.R | 88 +- R/find_cut.R | 18 R/irtQ-package.R | 10 R/irtfit.R | 1587 +++++++++++++++++++-------------------- R/lwrc.R | 5 R/pcd2.R | 21 R/plot_irtfit.R | 4 R/rdif.R | 2 R/reval_mst.R | 56 + R/ripd.R | 4 R/run_mst.R | 381 ++++----- R/score_resp.R | 18 R/shape_df.R | 18 R/simMST.R | 5 R/simdat.R | 3 R/traceline.R | 6 README.md | 861 ++++++++++----------- inst/doc/irtQ.Rmd | 11 inst/doc/irtQ.html | 20 man/catsib.Rd | 3 man/ctt.Rd | 24 man/ctt_alpha.Rd | 26 man/ctt_distr.Rd | 8 man/ctt_item.Rd | 9 man/figures/README-example-2.png |binary man/figures/README-example-3.png |binary man/figures/README-example-4.png |binary man/figures/README-example-5.png |binary man/figures/README-example-6.png |binary man/figures/README-example-7.png |binary man/find_cut.Rd | 6 man/irtQ-package.Rd | 10 man/lwrc.Rd | 5 man/pcd2.Rd | 21 man/rdif.Rd | 2 man/reval_mst.Rd | 30 man/ripd.Rd | 4 man/run_mst.Rd | 76 + man/score_resp.Rd | 4 man/simMST.Rd | 5 man/traceline.Rd | 234 ++--- tests/testthat/test-cac_rud.R |only tests/testthat/test-ctt.R | 94 ++ tests/testthat/test-ctt_distr.R | 40 tests/testthat/test-dif.R | 22 tests/testthat/test-irtfit.R |only tests/testthat/test-reval_mst.R |only tests/testthat/test-run_mst.R |only tests/testthat/test-score_resp.R | 29 tests/testthat/test-shape_df.R |only tests/testthat/test-simdat.R |only vignettes/irtQ.Rmd | 11 61 files changed, 2367 insertions(+), 1794 deletions(-)
Title: Insect Ecology Data Analysis Toolkit
Description: A collection of analytical tools for insect ecology research,
currently covering age-stage, two-sex life table analysis,
dose-response bioassays, temperature-dependent development and insect
phenology prediction. The life table module follows the age-stage,
two-sex life table theory of Chi (1988) <doi:10.1093/ee/17.1.26> and
Chi et al. (2020) <doi:10.1127/entomologia/2020/0936>. It supports
fast batch processing of multi-group datasets, validates raw 'csv'
data, computes cohort size, mean fecundity, age-stage survival rates,
age-specific survival, age-specific fecundity, life expectancy, and
derived population parameters (net reproductive rate, intrinsic and
finite rates of increase, mean generation time), simultaneously
generates age-stage survival curves for all groups, and exports all
tabular results and plots to 'Excel' in a single run. The bioassay
module estimates lethal concentrations by the traditional and the
weighted (improved) linear regression methods and by pro [...truncated...]
Author: Wangyao Li [aut, cre, cph],
Yongsheng Zhang [aut],
Huan Yu [aut]
Maintainer: Wangyao Li <1561941342@qq.com>
Diff between insectecol versions 1.1.1 dated 2026-10-05 and 1.1.2 dated 2026-10-08
DESCRIPTION | 8 MD5 | 116 +-- NAMESPACE | 1 R/check_data.R | 7 R/emergence_calc.R | 12 R/emergence_export.R | 23 R/emergence_main.R | 122 ++- R/emergence_plot.R | 6 R/font.R | 451 ++++++++++++- R/gdd_calc.R | 14 R/gdd_export.R | 74 +- R/gdd_fit.R | 52 + R/gdd_main.R | 136 ++-- R/gdd_plot.R | 162 ++++ R/lc50_data.R | 6 R/lc50_export.R | 125 +-- R/lc50_export_auto.R | 438 ++++++------- R/lc50_main.R | 104 ++- R/lc50_plot.R | 139 ++-- R/lifetable_bootstrap.R | 1004 +++++++++++++++--------------- R/lifetable_calculate.R | 352 +++++----- R/lifetable_data.R | 10 R/lifetable_export.R | 277 ++++---- R/lifetable_indicators.R | 224 +++++- R/lifetable_main.R | 792 +++++++++++++---------- R/lifetable_plot.R | 326 +++++---- R/plot_path.R |only README.md | 62 + inst/CITATION | 2 man/calc_ex.Rd | 11 man/calc_exj.Rd |only man/calc_r.Rd | 15 man/emergence_analyze.Rd | 72 +- man/emergence_calc.Rd | 12 man/emergence_export.Rd | 2 man/emergence_export_plot.Rd | 2 man/figures/emergence.png |binary man/figures/gdd.png |binary man/figures/lc50.png |binary man/gdd_analyze.Rd | 92 +- man/gdd_calc.Rd | 14 man/gdd_export.Rd | 2 man/gdd_export_plot.Rd | 37 - man/gdd_plot.Rd | 10 man/lc50_analyze.Rd | 69 +- man/lc50_export.Rd | 4 man/lc50_export_auto.Rd | 4 man/lc50_plot.Rd | 7 man/lifeTable_analyze.Rd | 92 ++ man/lifeTable_boot_test.Rd | 4 man/lifeTable_bootstrap.Rd | 4 man/lifeTable_calculate.Rd | 7 man/lifeTable_calculate_all.Rd | 9 man/lifeTable_export.Rd | 31 man/lifeTable_plot.Rd | 21 tests/testthat/test-emergence.R | 21 tests/testthat/test-gdd.R | 79 ++ tests/testthat/test-lc50.R | 28 tests/testthat/test-life_table.R | 189 +++++ tests/testthat/twosex_ptw_example.csv |only tests/testthat/twosex_ptw_exj_example.txt |only 61 files changed, 3775 insertions(+), 2108 deletions(-)
Title: Statistical Consistency Checker for Published Research Results
Description: A conservative, assumption-aware statistical consistency checker
for already-extracted research-results text. Parses test statistics, effect
sizes, and confidence intervals across multiple citation styles including
American Psychological Association (APA), Harvard, Frontiers, PLOS ONE,
Scientific Reports, Nature Human Behaviour, PeerJ, eLife, PNAS, and others.
Recomputes effect sizes using all plausible variants when design is ambiguous,
and validates internal consistency. Supports t-tests, F-tests/ANOVA,
correlations, chi-square, z-tests, regression, and nonparametric tests.
Explicitly tracks all assumptions and uncertainty in output. Detects decision
errors (significance reversals) similar to 'statcheck'. From v0.4.0 file
extraction is no longer part of the package — pair with an external extractor
(e.g., 'docpluck' at <https://docpluck.app>) and pass the resulting text
to check_text(). Note: this package is under active development and results
should be independently verified. [...truncated...]
Author: Gilad Feldman [aut, cre]
Maintainer: Gilad Feldman <giladfel@gmail.com>
Diff between effectcheck versions 0.2.3 dated 2026-03-25 and 0.7.17 dated 2026-10-08
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|only effectcheck-0.7.17/effectcheck/tests/testthat/test-v065-bare-binomial.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v065-beta-precedes-t-binding.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v065-chi-subtype-gof-vs-independence.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v065-mcnemar-subtype-guard.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v065-welch-not-paired.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v066-bare-r-ci-no-p-effect-adoption.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v066-pearson-not-spearman-context-bleed.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v066-robma-model-averaged-r.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v066-table-comparison-column-and-dedup.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v066-within-anova-design.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v067-docpluck-v2498-eta2-r.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v068-continuation-subchunk-design.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v068-dedup-distinct-p-not-collapsed.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v068-equals-glyph-u00bc.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v068-interaction-p.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v068-mode-b-joint-paired-design.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v068-onesample-section-scope.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v068-robma-r-note-not-skip.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v070-robust-nonparametric-types.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v071-rank-test-estimand.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v0711-no-variants-not-cross-family.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v0712-table-row-domain-and-cross-table-dup.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v0713-uncaptioned-table-rows.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v0714-ci-verdict-premise.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v0714-generalized-eta2.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v0714-mediation-direct-vs-acme.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v0714-omnibus-contrast-undecided.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v0714-quoted-restatement.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v0714-welch-backsolved-n.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v0717-welch-stated-n-kept.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v074-paragraph-chunking.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v074-separator-review.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v075-dual-p-and-legend.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v075-locale-conflict.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v075-mean-diff-ci.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v075-methods-resample-count.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v076-docpluck-consumer-canary.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v076-docpluck-contract.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v076-outbox-0813-defects.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v078-ci-engine-labelling.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v079-chisq-n-backsolve-is-not-verification.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v079-ci-method-label-honesty.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v079-ci-severity-tiers.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v079-ci-symmetry-on-correlations.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v079-corr-bare-r-adopts-matched-df.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v079-corr-matched-df-is-ambiguous-not-resolved.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v079-corr-n-provenance-reaches-output.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v079-design-ambiguous-action-scope.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v079-estimate-outside-ci.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-v079-robust-family-nsource-undefined.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-version-fallback-honesty.R |only effectcheck-0.7.17/effectcheck/tests/testthat/test-z-u-effects.R |only effectcheck-0.7.17/effectcheck/vignettes/effectcheck.Rmd | 51 310 files changed, 21539 insertions(+), 4323 deletions(-)
Title: Read, Write, and Modify TOML Files
Description: Simple toolkit for working with TOML text. Based on tomledit which
allows for modifying TOML while preserving order, comments,and whitespace.
Author: Jeroen Ooms [aut, cre]
Maintainer: Jeroen Ooms <jeroenooms@gmail.com>
Diff between toml versions 1.1.0 dated 2026-04-13 and 1.2.0 dated 2026-10-08
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS | 3 +++ R/tomledit.R | 2 +- 4 files changed, 10 insertions(+), 7 deletions(-)
Title: Parameter Converter and Calculator for Health Technology
Assessment
Description: An interactive 'shiny' application for Health Technology
Assessment (HTA) parameter estimation. Converts between rates,
probabilities, odds, and hazard ratios (HR); extrapolates survival
curves (Exponential, Weibull, Log-Logistic); fits probabilistic
sensitivity analysis (PSA) distributions (Beta, Gamma, LogNormal,
Dirichlet) via the method of moments; calculates incremental
cost-effectiveness ratios (ICERs), net monetary benefit (NMB),
value-based pricing, and budget impact; adjusts costs for inflation,
discounting, and purchasing power parity (PPP) across 30 countries;
and adjusts background mortality using life-table methods. Designed
for researchers building cost-effectiveness and budget-impact models
who need auditable, formula-documented parameter transformations.
Methods include Zhang and Yu (1998)
<doi:10.1001/jama.280.19.1690> for odds ratio (OR) to relative
risk (RR) conversion and Chinn (2000, Statistics in Medicine, 19,
3127-3131) for effect-size transformations.
Author: Abhijit Pakhare [aut, cre],
Soumya Jain [aut],
Anvita Malhotra [aut],
Shivansh Verma [aut],
Biju Somen [aut],
Oshima Sachin [aut],
Beena Joshi [aut],
Ankur Joshi [aut]
Maintainer: Abhijit Pakhare <drpakhare@gmail.com>
Diff between ParCC versions 1.4.0 dated 2026-03-30 and 1.4.1 dated 2026-10-08
DESCRIPTION | 22 ++++++++-- MD5 | 28 +++++++------ NEWS.md | 19 +++++++++ R/mod_batch.R | 1 R/mod_core_conv.R | 67 ++++++++++++++++++++------------ R/mod_diagnostic.R | 18 +++++--- R/mod_home.R | 20 ++++++++- R/mod_hr_converter.R | 75 ++++++++++++++++++++++++------------ R/mod_psa.R | 2 R/mod_report.R | 72 +++++++++++++++++++++++++++++++--- R/mod_static_pages.R | 61 +++++++++++++++++++++++++++++ R/parcc_helpers.R | 7 ++- README.md | 13 ++++-- man/figures |only tests/testthat/test-hr-conversion.R | 21 +++++++--- 15 files changed, 331 insertions(+), 95 deletions(-)
Title: Ensemble Platform for Species Distribution Modeling
Description: Functions for species distribution modelling, to calibrate, evaluate, and project
species-environment relationships across space and time using multiple modelling algorithms and
ensemble forecasting. It accommodates diverse ecological data types (presence-only, presence-absence,
counts, multi-class abundance, or relative/absolute abundance) within a unified modelling workflow
which includes cross-validation schemes, pseudo-absence selection strategies, expanded model
parametrization options, a dozen of algorithms, and tools for exploring and visualizing outputs.
Author: Maya Gueguen [aut, cre] ,
Helene Blancheteau [aut],
Remi Lemaire-Patin [aut],
Wilfried Thuiller [aut]
Maintainer: Maya Gueguen <maya.gueguen@univ-grenoble-alpes.fr>
Diff between biomod2 versions 4.3-4-6 dated 2026-05-23 and 4.3-4-7 dated 2026-10-08
biomod2-4.3-4-6/biomod2/man/predict.bm.Rd |only biomod2-4.3-4-6/biomod2/man/predict.em.Rd |only biomod2-4.3-4-7/biomod2/DESCRIPTION | 33 +-- biomod2-4.3-4-7/biomod2/MD5 | 149 ++++++-------- biomod2-4.3-4-7/biomod2/R/BIOMOD_EnsembleForecasting.R | 33 ++- biomod2-4.3-4-7/biomod2/R/BIOMOD_FormatingData.R | 13 - biomod2-4.3-4-7/biomod2/R/BIOMOD_Modeling.R | 28 ++ biomod2-4.3-4-7/biomod2/R/BIOMOD_Projection.R | 64 +++--- biomod2-4.3-4-7/biomod2/R/biomod2_classes_0.R | 24 -- biomod2-4.3-4-7/biomod2/R/biomod2_classes_1.R | 84 +++---- biomod2-4.3-4-7/biomod2/R/biomod2_classes_3.R | 30 +- biomod2-4.3-4-7/biomod2/R/biomod2_classes_4.R | 80 ++----- biomod2-4.3-4-7/biomod2/R/biomod2_classes_5.R | 27 -- biomod2-4.3-4-7/biomod2/R/biomod2_internal.R | 106 ++++++--- biomod2-4.3-4-7/biomod2/R/bm_BinaryTransformation.R | 2 biomod2-4.3-4-7/biomod2/R/bm_FindOptimStat.R | 4 biomod2-4.3-4-7/biomod2/R/bm_ModelingOptions.R | 32 --- biomod2-4.3-4-7/biomod2/R/bm_PlotEvalBoxplot.R | 4 biomod2-4.3-4-7/biomod2/R/bm_PlotEvalMean.R | 4 biomod2-4.3-4-7/biomod2/R/bm_PlotRangeSize.R | 6 biomod2-4.3-4-7/biomod2/R/bm_PlotResponseCurves.R | 2 biomod2-4.3-4-7/biomod2/R/bm_PlotVarImpBoxplot.R | 2 biomod2-4.3-4-7/biomod2/R/bm_PseudoAbsences.R | 6 biomod2-4.3-4-7/biomod2/R/bm_RunModelsLoop.R | 34 ++- biomod2-4.3-4-7/biomod2/R/bm_SampleBinaryVector.R | 2 biomod2-4.3-4-7/biomod2/R/bm_Tuning.R | 55 +---- biomod2-4.3-4-7/biomod2/README.md | 8 biomod2-4.3-4-7/biomod2/build/partial.rdb |binary biomod2-4.3-4-7/biomod2/build/vignette.rds |binary biomod2-4.3-4-7/biomod2/inst/CITATION |only biomod2-4.3-4-7/biomod2/inst/doc/news.Rmd | 18 + biomod2-4.3-4-7/biomod2/inst/doc/news.html | 30 ++ biomod2-4.3-4-7/biomod2/man/BIOMOD.ensemble.models.out.Rd | 10 biomod2-4.3-4-7/biomod2/man/BIOMOD.formated.data.PA.Rd | 8 biomod2-4.3-4-7/biomod2/man/BIOMOD.formated.data.Rd | 8 biomod2-4.3-4-7/biomod2/man/BIOMOD.models.options.Rd | 10 biomod2-4.3-4-7/biomod2/man/BIOMOD.models.out.Rd | 10 biomod2-4.3-4-7/biomod2/man/BIOMOD.options.dataset.Rd | 8 biomod2-4.3-4-7/biomod2/man/BIOMOD.options.default.Rd | 8 biomod2-4.3-4-7/biomod2/man/BIOMOD.projection.out.Rd | 10 biomod2-4.3-4-7/biomod2/man/BIOMOD.rangesize.out.Rd | 10 biomod2-4.3-4-7/biomod2/man/BIOMOD.stored.data.Rd | 10 biomod2-4.3-4-7/biomod2/man/BIOMOD_EnsembleForecasting.Rd | 14 - biomod2-4.3-4-7/biomod2/man/BIOMOD_EnsembleModeling.Rd | 14 - biomod2-4.3-4-7/biomod2/man/BIOMOD_FormatingData.Rd | 14 - biomod2-4.3-4-7/biomod2/man/BIOMOD_LoadModels.Rd | 14 - biomod2-4.3-4-7/biomod2/man/BIOMOD_Modeling.Rd | 23 +- biomod2-4.3-4-7/biomod2/man/BIOMOD_Projection.Rd | 14 - biomod2-4.3-4-7/biomod2/man/BIOMOD_RangeSize.Rd | 14 - biomod2-4.3-4-7/biomod2/man/biomod2_ensemble_model.Rd | 10 biomod2-4.3-4-7/biomod2/man/biomod2_model.Rd | 10 biomod2-4.3-4-7/biomod2/man/bm_BinaryTransformation.Rd | 38 +-- biomod2-4.3-4-7/biomod2/man/bm_CrossValidation.Rd | 38 +-- biomod2-4.3-4-7/biomod2/man/bm_FindOptimStat.Rd | 42 +-- biomod2-4.3-4-7/biomod2/man/bm_MakeFormula.Rd | 38 +-- biomod2-4.3-4-7/biomod2/man/bm_ModelAnalysis.Rd | 50 ++-- biomod2-4.3-4-7/biomod2/man/bm_ModelingOptions.Rd | 43 ++-- biomod2-4.3-4-7/biomod2/man/bm_PlotEvalBoxplot.Rd | 50 ++-- biomod2-4.3-4-7/biomod2/man/bm_PlotEvalMean.Rd | 50 ++-- biomod2-4.3-4-7/biomod2/man/bm_PlotRangeSize.Rd | 50 ++-- biomod2-4.3-4-7/biomod2/man/bm_PlotResponseCurves.Rd | 50 ++-- biomod2-4.3-4-7/biomod2/man/bm_PlotVarImpBoxplot.Rd | 50 ++-- biomod2-4.3-4-7/biomod2/man/bm_PseudoAbsences.Rd | 38 +-- biomod2-4.3-4-7/biomod2/man/bm_RangeSize.Rd | 38 +-- biomod2-4.3-4-7/biomod2/man/bm_RunModelsLoop.Rd | 38 +-- biomod2-4.3-4-7/biomod2/man/bm_SRE.Rd | 38 +-- biomod2-4.3-4-7/biomod2/man/bm_SampleBinaryVector.Rd | 38 +-- biomod2-4.3-4-7/biomod2/man/bm_SampleFactorLevels.Rd | 38 +-- biomod2-4.3-4-7/biomod2/man/bm_Tuning.Rd | 56 ++--- biomod2-4.3-4-7/biomod2/man/bm_VariablesImportance.Rd | 38 +-- biomod2-4.3-4-7/biomod2/man/getters.bm.Rd | 6 biomod2-4.3-4-7/biomod2/man/getters.out.Rd | 6 biomod2-4.3-4-7/biomod2/man/load_stored_object.Rd | 4 biomod2-4.3-4-7/biomod2/man/predict2.bm.Rd | 36 +-- biomod2-4.3-4-7/biomod2/man/predict2.em.Rd | 16 - biomod2-4.3-4-7/biomod2/man/setters.Rd | 6 biomod2-4.3-4-7/biomod2/vignettes/news.Rmd | 18 + 77 files changed, 1033 insertions(+), 979 deletions(-)
Title: Draw from Sequence of 'My Man' Posts by Kevin Kruse
Description: Starting on the afternoon of July 17, 2026, Kevin Kruse fired off an astonishing
array of 'BlueSky' replies to an initial post of his featuring a certain government figure:
<https://bsky.app/profile/did:plc:cnpe7qvcyjrhm6w7w7e4atur/post/3mqum4mxsuk2g>. This lasted a week and generated
nearly seven hundred posts. A second wave started on August 12, 2026, with this post:
<https://bsky.app/profile/kevinmkruse.bsky.social/post/3mstvbjpagc2a>. A third wave started on August 17, 2026,
with <https://bsky.app/profile/kevinmkruse.bsky.social/post/3mtcpiw7gi22j>. A fourth wave started on August 27,
2026, with <https://bsky.app/profile/kevinmkruse.bsky.social/post/3mu3pugs2yk2f>. A fifth wave ran on August 30,
2026, beginning with <https://bsky.app/profile/kevinmkruse.bsky.social/post/3mudbzy5ksk25>. A sixth wave started
September 4, 2026, with <https://bsky.app/profile/kevinmkruse.bsky.social/post/3muparqtdkk2w>. A seventh wave
started September 12, 2026, wi [...truncated...]
Author: Dirk Eddelbuettel [aut, cre]
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between myman versions 0.1.0 dated 2026-09-27 and 0.10.0 dated 2026-10-08
ChangeLog | 114 +++++++++++ DESCRIPTION | 15 - MD5 | 16 - NAMESPACE | 2 R/myman.R | 42 +++- README.md | 23 +- inst/NEWS.Rd | 23 ++ inst/myman/myman.csv | 490 +++++++++++++++++++++++++++++++++++++++++++++++++++ man/myman.Rd | 31 ++- 9 files changed, 714 insertions(+), 42 deletions(-)
Title: Microdata Infrastructure Tools for Firm-Level Microdata Research
Description: Supports the full analysis pipeline for researchers working with
firm-level microdata. Provides data tools for panel preparation (import,
outlier detection, classification harmonization), analytical methods
(production function estimation, capital stock measurement, markups,
intensity measures, distributions, regression, clustering), and disclosure
tools for tagging outputs with dominance and observation counts before
aggregation and publication.
Production function estimation implements methods by Ackerberg, Caves and
Frazer (2015) <doi:10.3982/ECTA13408>, Levinsohn and Petrin (2003)
<doi:10.1111/1467-937X.00246>, Wooldridge (2009)
<doi:10.1016/j.econlet.2009.04.026>, Petrin, Poi and Levinsohn (2004)
<doi:10.1177/1536867X0400400202>, and Arellano and Bond (1991)
<doi:10.2307/2297968> with the "too many instruments" correction by
Roodman (2009) <doi:10.1111/j.1468-0084.2008.00542.x>. Markup estimation
follows De Loecker and Warzynski (2012) <doi:1 [...truncated...]
Author: Daniele Aglio [aut],
Eric Bartelsman [aut],
Mirja Haelbig [aut],
Marco Miorandi [aut],
Johanna Weiss [aut, cre],
Alessandro Zona Mattioli [aut],
Julian Diaz-Acosta [ctb],
Alberto Ferreira [ctb],
Javier Miranda [ctb],
Marcelo Piemonte Ribeiro [ctb],
Re [...truncated...]
Maintainer: Johanna Weiss <johanna.weiss@iwhesl.onmicrosoft.com>
Diff between mditools versions 0.1.0 dated 2026-08-20 and 0.1.1 dated 2026-10-08
DESCRIPTION | 16 + MD5 | 85 +++++----- NAMESPACE | 54 +++--- NEWS.md |only R/hier_levels.R |only R/mdi_acf_prodest.R | 4 R/mdi_aggregate.R | 32 ++- R/mdi_clustering.R | 18 +- R/mdi_hier_apply.R | 2 R/mdi_import_data.R | 54 +++++- R/mdi_jointdist.R | 17 +- R/mdi_make_conc.R | 289 +++++++++++------------------------ R/mdi_outlier.R | 4 R/mdi_regress.R | 2 R/mditools-package.R | 7 R/utils.R | 47 +++++ README.md | 6 man/check_dt.Rd |only man/hier_levels.Rd |only man/mdi_acf_prodest.Rd | 22 +- man/mdi_aggregate.Rd | 75 +++++---- man/mdi_clustering.Rd | 130 ++++++++------- man/mdi_cs_prodest.Rd | 26 +-- man/mdi_disclose_crit.Rd | 76 ++++----- man/mdi_disclose_reg_tab.Rd | 48 +++-- man/mdi_dpgmm_prodest.Rd | 14 - man/mdi_estimate_markup.Rd | 10 - man/mdi_estimate_prodfun.Rd | 66 ++++--- man/mdi_hier_apply.Rd | 48 ++--- man/mdi_import_data.Rd | 70 +++++--- man/mdi_intensity.Rd | 8 man/mdi_jointdist.Rd | 45 +++-- man/mdi_lp_prodest.Rd | 18 +- man/mdi_make_conc.Rd | 44 +++-- man/mdi_ols_prodest.Rd | 14 - man/mdi_outlier.Rd | 12 - man/mdi_pim_capital.Rd | 26 +-- man/mdi_regress.Rd | 106 ++++++------ man/mdi_transition.Rd | 12 - man/mdi_wdrg_prodest.Rd | 6 man/mditools-package.Rd | 8 man/panel_lag_L.Rd |only tests/testthat/test-mdi_aggregate.R | 19 ++ tests/testthat/test-mdi_clustering.R | 37 ++++ tests/testthat/test-mdi_make_conc.R | 111 +++++++++++++ tests/testthat/test-mdi_outlier.R | 4 46 files changed, 996 insertions(+), 696 deletions(-)
Title: Read and Write General Transit Feed Specification (GTFS) Files
Description: Tools for the development of packages related to General
Transit Feed Specification (GTFS) files. Establishes a standard for
representing GTFS feeds using R data types. Provides fast and flexible
functions to read and write GTFS feeds while sticking to this
standard. Defines a basic 'gtfs' class which is meant to be extended
by packages that depend on it. And offers utility functions that
support checking the structure of GTFS objects.
Author: Daniel Herszenhut [aut] ,
Flavio Poletti [aut, cre],
Mark Padgham [aut],
Rafael H. M. Pereira [rev] ,
Tom Buckley [rev],
Ipea - Institute for Applied Economic Research [cph, fnd]
Maintainer: Flavio Poletti <flavio.poletti@hotmail.ch>
Diff between gtfsio versions 1.2.1 dated 2026-05-20 and 1.2.2 dated 2026-10-08
DESCRIPTION | 8 +++--- MD5 | 34 ++++++++++++++-------------- NEWS.md | 7 +++++ R/import_gtfs.R | 13 ++++++++-- inst/doc/gtfsio.html | 3 +- inst/extdata/macosx.zip |only inst/extdata/na_strings.zip |only inst/reference/create_gtfs_reference_data.R | 13 ++++++---- inst/tinytest/test_import_gtfs.R | 19 +++++++++++++++ man/assert_gtfs.Rd | 4 +-- man/check_field_class.Rd | 6 ++-- man/check_field_exists.Rd | 6 ++-- man/check_file_exists.Rd | 6 ++-- man/export_gtfs.Rd | 4 +-- man/gtfsio-package.Rd | 1 man/gtfsio_error.Rd | 4 +-- man/import_gtfs.Rd | 7 +++-- man/new_gtfs.Rd | 4 +-- man/parent_function_error.Rd | 4 +-- 19 files changed, 92 insertions(+), 51 deletions(-)
Title: Visually Exploring Random Forests
Description: Graphic elements for exploring Random Forests using the
'randomForest' or 'randomForestSRC' package for survival, regression
and classification forests and 'ggplot2' package plotting. Implements
visualizations of the methods described in Breiman (2001)
<doi:10.1023/A:1010933404324> and Ishwaran, Kogalur, Blackstone, and
Lauer (2008) <doi:10.1214/08-AOAS169>.
Author: John Ehrlinger [aut, cre]
Maintainer: John Ehrlinger <john.ehrlinger@gmail.com>
Diff between ggRandomForests versions 3.5.3 dated 2026-09-11 and 3.5.4 dated 2026-10-08
DESCRIPTION | 8 MD5 | 57 +- NEWS.md | 81 +++ R/gg_partial.R | 9 R/gg_partial_rfsrc.R | 67 ++- R/gg_partial_varpro.R | 4 R/gg_udependent.R | 30 + R/kaplan.R | 31 - R/nelson.R | 84 +++ R/plot.gg_partial.R | 116 ++++- R/utils.R | 82 ++- inst/doc/ggRandomForests-classification.html | 45 +- inst/doc/ggRandomForests-regression.html | 53 +- inst/doc/ggRandomForests-survival.html | 61 +- inst/doc/ggRandomForests.html | 21 inst/doc/uvarpro.html | 21 inst/doc/varpro.html | 41 + man/gg_partial.Rd | 9 man/gg_partial_rfsrc.Rd | 20 man/gg_partial_varpro.Rd | 4 man/gg_udependent.Rd | 13 man/nelson.Rd | 18 man/plot.gg_partial.Rd | 7 man/plot.gg_partial_rfsrc.Rd | 19 tests/testthat/_snaps/snapshots/gg-partial-categorical.svg |only tests/testthat/_snaps/snapshots/gg-partial-rfsrc-categorical-survival.svg |only tests/testthat/_snaps/snapshots/gg-partial-rfsrc-continuous-survival-by-group.svg |only tests/testthat/test_gg_partial.R | 212 ++++++++++ tests/testthat/test_gg_udependent.R | 42 + tests/testthat/test_kaplan_nelson.R | 172 +++++++- tests/testthat/test_snapshots.R | 43 ++ 31 files changed, 1109 insertions(+), 261 deletions(-)
More information about ggRandomForests at CRAN
Permanent link
Title: 'Amazon Web Services' Compute Services
Description: Interface to 'Amazon Web Services' compute services,
including 'Elastic Compute Cloud' ('EC2'), 'Lambda'
functions-as-a-service, containers, batch processing, and more
<https://aws.amazon.com/>.
Author: David Kretch [aut],
Adam Banker [aut],
Dyfan Jones [cre],
Amazon.com, Inc. [cph]
Maintainer: Dyfan Jones <dyfan.r.jones@gmail.com>
Diff between paws.compute versions 0.10.0 dated 2026-05-31 and 0.11.0 dated 2026-10-08
DESCRIPTION | 11 MD5 | 571 - NAMESPACE | 36 R/apprunner_interfaces.R | 222 R/apprunner_operations.R | 111 R/apprunner_service.R | 4 R/batch_interfaces.R | 300 R/batch_operations.R | 265 R/batch_service.R | 7 R/braket_interfaces.R | 102 R/braket_operations.R | 51 R/braket_service.R | 8 R/computeoptimizer_interfaces.R | 168 R/computeoptimizer_operations.R | 100 R/computeoptimizer_service.R | 4 R/ec2_interfaces.R | 4851 +++------- R/ec2_operations.R | 4064 ++++++-- R/ec2_service.R | 52 R/ec2instanceconnect_interfaces.R | 12 R/ec2instanceconnect_operations.R | 6 R/ec2instanceconnect_service.R | 4 R/ecr_interfaces.R | 348 R/ecr_operations.R | 174 R/ecr_service.R | 6 R/ecrpublic_interfaces.R | 138 R/ecrpublic_operations.R | 69 R/ecrpublic_service.R | 6 R/ecs_interfaces.R | 462 R/ecs_operations.R | 319 R/ecs_service.R | 4 R/eks_interfaces.R | 444 R/eks_operations.R | 425 R/eks_service.R | 10 R/elasticbeanstalk_interfaces.R | 237 R/elasticbeanstalk_operations.R | 338 R/elasticbeanstalk_service.R | 38 R/emrcontainers_interfaces.R | 158 R/emrcontainers_operations.R | 154 R/emrcontainers_service.R | 8 R/emrserverless_interfaces.R | 132 R/emrserverless_operations.R | 66 R/emrserverless_service.R | 4 R/imagebuilder_interfaces.R | 462 R/imagebuilder_operations.R | 950 + R/imagebuilder_service.R | 86 R/lambda_interfaces.R | 506 - R/lambda_operations.R | 476 R/lambda_service.R | 9 R/lightsail_interfaces.R | 976 -- R/lightsail_operations.R | 544 - R/lightsail_service.R | 5 R/proton_interfaces.R | 522 - R/proton_operations.R | 261 R/proton_service.R | 4 R/serverlessapplicationrepository_interfaces.R | 78 R/serverlessapplicationrepository_operations.R | 42 R/serverlessapplicationrepository_service.R | 4 R/sysdata.rda |only man/apprunner.Rd | 4 man/batch.Rd | 7 man/batch_cancel_job.Rd | 4 man/batch_cancel_jobs.Rd |only man/batch_create_compute_environment.Rd | 7 man/batch_register_job_definition.Rd | 4 man/batch_terminate_job.Rd | 4 man/batch_terminate_jobs.Rd |only man/batch_terminate_service_job.Rd | 2 man/batch_terminate_service_jobs.Rd |only man/batch_update_compute_environment.Rd | 8 man/braket.Rd | 6 man/computeoptimizer.Rd | 4 man/computeoptimizer_put_recommendation_preferences.Rd | 11 man/ec2.Rd | 50 man/ec2_allocate_hosts.Rd | 3 man/ec2_associate_application_status_check.Rd |only man/ec2_attach_image_watermark.Rd |only man/ec2_authorize_security_group_ingress.Rd | 2 man/ec2_batch_modify_ipam_routing_policy_registrations.Rd |only man/ec2_cancel_capacity_reservation.Rd | 11 man/ec2_copy_image.Rd | 2 man/ec2_copy_snapshot.Rd | 2 man/ec2_copy_volumes.Rd | 8 man/ec2_create_application_status_check.Rd |only man/ec2_create_capacity_reservation_cancellation_quote.Rd |only man/ec2_create_capacity_reservation_date_change_quote.Rd |only man/ec2_create_capacity_reservation_fleet.Rd | 4 man/ec2_create_client_vpn_endpoint.Rd | 5 man/ec2_create_fleet.Rd | 4 man/ec2_create_flow_logs.Rd | 7 man/ec2_create_image.Rd | 21 man/ec2_create_interruptible_capacity_reservation_allocation.Rd | 5 man/ec2_create_ipam_internet_registry_association.Rd |only man/ec2_create_ipam_routing_policy_registration.Rd |only man/ec2_create_placement_group.Rd | 3 man/ec2_create_replace_root_volume_task.Rd | 17 man/ec2_create_traffic_mirror_filter_rule.Rd | 2 man/ec2_create_transit_gateway_policy_table_entry.Rd |only man/ec2_create_vpc_endpoint.Rd | 16 man/ec2_delete_application_status_check.Rd |only man/ec2_delete_client_vpn_endpoint_authorization_policy.Rd |only man/ec2_delete_ipam_internet_registry_association.Rd |only man/ec2_delete_ipam_routing_policy_registration.Rd |only man/ec2_delete_placement_group.Rd | 2 man/ec2_delete_transit_gateway_policy_table_entry.Rd |only man/ec2_describe_account_vpc_encryption_control.Rd |only man/ec2_describe_application_status.Rd |only man/ec2_describe_application_status_check_associations.Rd |only man/ec2_describe_application_status_checks.Rd |only man/ec2_describe_capacity_reservation_cancellation_quotes.Rd |only man/ec2_describe_capacity_reservation_date_change_quotes.Rd |only man/ec2_describe_capacity_reservation_topology.Rd | 2 man/ec2_describe_images.Rd | 9 man/ec2_describe_instance_status.Rd | 1 man/ec2_describe_ipam_internet_registry_associations.Rd |only man/ec2_describe_placement_groups.Rd | 2 man/ec2_describe_volumes_modifications.Rd | 5 man/ec2_describe_vpc_endpoints.Rd | 2 man/ec2_detach_image_watermark.Rd |only man/ec2_disable_application_status_check_suppression.Rd |only man/ec2_disassociate_application_status_check.Rd |only man/ec2_enable_application_status_check_suppression.Rd |only man/ec2_enable_ipam_internet_registry_association.Rd |only man/ec2_get_client_vpn_endpoint_authorization_policy.Rd |only man/ec2_get_ipam_discovered_routes.Rd |only man/ec2_get_ipam_internet_registry_association_asns.Rd |only man/ec2_get_ipam_internet_registry_association_cidrs.Rd |only man/ec2_get_ipam_route_origin_authorizations.Rd |only man/ec2_get_ipam_route_protection_findings.Rd |only man/ec2_get_ipam_routing_policy_registration_deltas.Rd |only man/ec2_get_ipam_routing_policy_registrations.Rd |only man/ec2_get_spot_placement_scores.Rd | 7 man/ec2_get_transit_gateway_policy_table_entries.Rd | 13 man/ec2_modify_account_vpc_encryption_control.Rd |only man/ec2_modify_application_status_check.Rd |only man/ec2_modify_capacity_reservation.Rd | 11 man/ec2_modify_client_vpn_endpoint.Rd | 5 man/ec2_modify_client_vpn_endpoint_authorization_policy.Rd |only man/ec2_modify_ipam_routing_policy_registration.Rd |only man/ec2_modify_transit_gateway_policy_table_entry.Rd |only man/ec2_modify_vpc_endpoint_payer_responsibility.Rd |only man/ec2_replace_image_instance_type_specification.Rd |only man/ec2_revoke_security_group_ingress.Rd | 2 man/ec2_update_interruptible_capacity_reservation_allocation.Rd | 9 man/ec2_validate_security_group_quotas_for_interface.Rd |only man/ec2instanceconnect.Rd | 4 man/ecr.Rd | 4 man/ecrpublic.Rd | 4 man/ecs.Rd | 4 man/ecs_create_daemon.Rd | 11 man/ecs_create_express_gateway_service.Rd | 30 man/ecs_create_service.Rd | 5 man/ecs_list_daemons.Rd | 2 man/ecs_register_daemon_task_definition.Rd | 12 man/ecs_update_daemon.Rd | 11 man/ecs_update_express_gateway_service.Rd | 22 man/ecs_update_service.Rd | 5 man/eks.Rd | 10 man/eks_activate_certificate_authority.Rd |only man/eks_cancel_update.Rd |only man/eks_create_certificate_authority.Rd |only man/eks_create_cluster.Rd | 11 man/eks_delete_certificate_authority.Rd |only man/eks_describe_certificate_authority.Rd |only man/eks_list_certificate_authorities.Rd |only man/eks_update_cluster_config.Rd | 13 man/eks_update_cluster_version.Rd | 7 man/elasticbeanstalk.Rd | 36 man/elasticbeanstalk_associate_environment_operations_role.Rd | 5 man/elasticbeanstalk_create_application_version.Rd | 23 man/elasticbeanstalk_create_configuration_template.Rd | 12 man/elasticbeanstalk_create_environment.Rd | 18 man/elasticbeanstalk_describe_account_attributes.Rd | 6 man/elasticbeanstalk_describe_applications.Rd | 2 man/elasticbeanstalk_describe_configuration_settings.Rd | 4 man/elasticbeanstalk_describe_environment_health.Rd | 2 man/elasticbeanstalk_describe_environment_resources.Rd | 12 man/elasticbeanstalk_describe_environments.Rd | 8 man/elasticbeanstalk_describe_events.Rd | 18 man/elasticbeanstalk_describe_instances_health.Rd | 10 man/elasticbeanstalk_disassociate_environment_operations_role.Rd | 5 man/elasticbeanstalk_list_platform_branches.Rd | 5 man/elasticbeanstalk_list_platform_versions.Rd | 5 man/elasticbeanstalk_list_tags_for_resource.Rd | 4 man/elasticbeanstalk_rebuild_environment.Rd | 10 man/elasticbeanstalk_request_environment_info.Rd | 4 man/elasticbeanstalk_restart_app_server.Rd | 4 man/elasticbeanstalk_retrieve_environment_info.Rd | 4 man/elasticbeanstalk_terminate_environment.Rd | 12 man/elasticbeanstalk_update_application.Rd | 2 man/elasticbeanstalk_update_environment.Rd | 18 man/elasticbeanstalk_update_tags_for_resource.Rd | 4 man/emrcontainers.Rd | 8 man/emrcontainers_create_managed_endpoint.Rd | 5 man/emrcontainers_create_virtual_cluster.Rd | 10 man/emrcontainers_delete_security_configuration.Rd |only man/emrcontainers_delete_virtual_cluster.Rd | 2 man/emrcontainers_describe_virtual_cluster.Rd | 2 man/emrcontainers_list_virtual_clusters.Rd | 2 man/emrcontainers_update_virtual_cluster.Rd |only man/emrserverless.Rd | 4 man/imagebuilder.Rd | 86 man/imagebuilder_cancel_image_creation.Rd | 6 man/imagebuilder_cancel_lifecycle_execution.Rd | 7 man/imagebuilder_create_component.Rd | 12 man/imagebuilder_create_container_recipe.Rd | 25 man/imagebuilder_create_distribution_configuration.Rd | 13 man/imagebuilder_create_image.Rd | 25 man/imagebuilder_create_image_pipeline.Rd | 35 man/imagebuilder_create_image_recipe.Rd | 26 man/imagebuilder_create_infrastructure_configuration.Rd | 33 man/imagebuilder_create_lifecycle_policy.Rd | 23 man/imagebuilder_create_workflow.Rd | 22 man/imagebuilder_delete_component.Rd | 2 man/imagebuilder_delete_container_recipe.Rd | 2 man/imagebuilder_delete_distribution_configuration.Rd | 2 man/imagebuilder_delete_image_pipeline.Rd | 2 man/imagebuilder_delete_infrastructure_configuration.Rd | 2 man/imagebuilder_delete_lifecycle_policy.Rd | 4 man/imagebuilder_delete_workflow.Rd | 2 man/imagebuilder_distribute_image.Rd | 23 man/imagebuilder_get_component.Rd | 6 man/imagebuilder_get_component_policy.Rd | 4 man/imagebuilder_get_distribution_configuration.Rd | 4 man/imagebuilder_get_image.Rd | 6 man/imagebuilder_get_image_pipeline.Rd | 4 man/imagebuilder_get_image_policy.Rd | 4 man/imagebuilder_get_image_recipe.Rd | 6 man/imagebuilder_get_image_recipe_policy.Rd | 4 man/imagebuilder_get_infrastructure_configuration.Rd | 4 man/imagebuilder_get_lifecycle_execution.Rd | 9 man/imagebuilder_get_lifecycle_policy.Rd | 4 man/imagebuilder_get_marketplace_resource.Rd | 6 man/imagebuilder_get_workflow.Rd | 6 man/imagebuilder_get_workflow_execution.Rd | 6 man/imagebuilder_get_workflow_step_execution.Rd | 8 man/imagebuilder_import_component.Rd | 16 man/imagebuilder_import_disk_image.Rd | 16 man/imagebuilder_import_vm_image.Rd | 17 man/imagebuilder_list_component_build_versions.Rd | 12 man/imagebuilder_list_components.Rd | 15 man/imagebuilder_list_container_recipes.Rd | 6 man/imagebuilder_list_distribution_configurations.Rd | 4 man/imagebuilder_list_image_build_versions.Rd | 6 man/imagebuilder_list_image_packages.Rd | 10 man/imagebuilder_list_image_pipeline_images.Rd | 4 man/imagebuilder_list_image_pipelines.Rd | 4 man/imagebuilder_list_image_recipes.Rd | 4 man/imagebuilder_list_image_scan_finding_aggregations.Rd | 11 man/imagebuilder_list_image_scan_findings.Rd | 14 man/imagebuilder_list_images.Rd | 12 man/imagebuilder_list_infrastructure_configurations.Rd | 4 man/imagebuilder_list_lifecycle_execution_resources.Rd | 14 man/imagebuilder_list_lifecycle_executions.Rd | 10 man/imagebuilder_list_lifecycle_policies.Rd | 11 man/imagebuilder_list_waiting_workflow_steps.Rd | 10 man/imagebuilder_list_workflow_build_versions.Rd | 6 man/imagebuilder_list_workflow_executions.Rd | 4 man/imagebuilder_list_workflow_step_executions.Rd | 4 man/imagebuilder_list_workflows.Rd | 14 man/imagebuilder_put_component_policy.Rd | 2 man/imagebuilder_put_container_recipe_policy.Rd | 4 man/imagebuilder_put_image_policy.Rd | 4 man/imagebuilder_put_image_recipe_policy.Rd | 2 man/imagebuilder_retry_image.Rd | 9 man/imagebuilder_send_workflow_step_action.Rd | 16 man/imagebuilder_start_image_pipeline_execution.Rd | 6 man/imagebuilder_start_resource_state_update.Rd | 19 man/imagebuilder_update_distribution_configuration.Rd | 8 man/imagebuilder_update_image_pipeline.Rd | 30 man/imagebuilder_update_infrastructure_configuration.Rd | 26 man/imagebuilder_update_lifecycle_policy.Rd | 16 man/lambda.Rd | 7 man/lambda_add_permission.Rd | 14 man/lambda_create_capacity_provider.Rd | 8 man/lambda_create_event_source_mapping.Rd | 24 man/lambda_create_function.Rd | 22 man/lambda_delete_resource_policy.Rd |only man/lambda_get_durable_execution.Rd | 4 man/lambda_get_resource_policy.Rd |only man/lambda_invoke.Rd | 4 man/lambda_invoke_with_response_stream.Rd | 16 man/lambda_list_durable_executions_by_function.Rd | 2 man/lambda_list_layer_versions.Rd | 8 man/lambda_list_layers.Rd | 8 man/lambda_publish_layer_version.Rd | 8 man/lambda_put_resource_policy.Rd |only man/lambda_update_capacity_provider.Rd | 8 man/lambda_update_event_source_mapping.Rd | 34 man/lambda_update_function_code.Rd | 21 man/lambda_update_function_configuration.Rd | 4 man/lightsail.Rd | 5 man/lightsail_create_distribution.Rd | 15 man/lightsail_create_relational_database.Rd | 4 man/lightsail_get_profile.Rd |only man/lightsail_update_distribution.Rd | 17 man/proton.Rd | 4 man/serverlessapplicationrepository.Rd | 4 tests/testthat.R |only tests/testthat/test_apprunner.R | 14 tests/testthat/test_batch.R | 9 tests/testthat/test_braket.R | 2 tests/testthat/test_computeoptimizer.R | 3 tests/testthat/test_ec2.R | 366 tests/testthat/test_ec2instanceconnect.R | 2 tests/testthat/test_ecr.R | 7 tests/testthat/test_ecrpublic.R | 4 tests/testthat/test_ecs.R | 10 tests/testthat/test_eks.R | 7 tests/testthat/test_elasticbeanstalk.R | 10 tests/testthat/test_emrcontainers.R | 5 tests/testthat/test_emrserverless.R | 3 tests/testthat/test_imagebuilder.R | 17 tests/testthat/test_lambda.R | 7 tests/testthat/test_lightsail.R | 2 tests/testthat/test_proton.R | 10 tests/testthat/test_serverlessapplicationrepository.R | 3 316 files changed, 12014 insertions(+), 9639 deletions(-)
Title: Idealisation of Patch Clamp Recordings
Description: Implements the model-free multiscale idealisation approaches: Jump-Segmentation by MUltiResolution Filter (JSMURF), Hotz et al. (2013) <doi:10.1109/TNB.2013.2284063>, JUmp Local dEconvolution Segmentation filter (JULES), Pein et al. (2018) <doi:10.1109/TNB.2018.2845126>, and Heterogeneous Idealization by Local testing and DEconvolution (HILDE), Pein et al. (2021) <doi:10.1109/TNB.2020.3031202>. Further details on how to use them are given in Pein, Eltzner and Munk (2021) <doi:10.1007/s00249-021-01506-8>.
Author: Florian Pein [aut, cre],
Timo Aspelmeier [ctb]
Maintainer: Florian Pein <f.pein@lancaster.ac.uk>
This is a re-admission after prior archival of version 1.2-0 dated 2025-06-27
Diff between clampSeg versions 1.2-0 dated 2025-06-27 and 1.3-0 dated 2026-10-08
clampSeg-1.2-0/clampSeg/build/vignette.rds |only clampSeg-1.2-0/clampSeg/inst/doc |only clampSeg-1.2-0/clampSeg/vignettes |only clampSeg-1.3-0/clampSeg/ChangeLog | 51 +++++++ clampSeg-1.3-0/clampSeg/DESCRIPTION | 17 +- clampSeg-1.3-0/clampSeg/MD5 | 54 ++----- clampSeg-1.3-0/clampSeg/build/partial.rdb |only clampSeg-1.3-0/clampSeg/inst/CITATION | 16 ++ clampSeg-1.3-0/clampSeg/man/clampSeg-package.Rd | 62 +++++---- clampSeg-1.3-0/clampSeg/man/createLocalList.Rd | 32 +++- clampSeg-1.3-0/clampSeg/man/deconvolveLocally.Rd | 14 +- clampSeg-1.3-0/clampSeg/man/getCritVal.Rd | 47 +++++- clampSeg-1.3-0/clampSeg/man/hilde.Rd | 82 ++++++++---- clampSeg-1.3-0/clampSeg/man/improveSmallScales.Rd | 50 ++++--- clampSeg-1.3-0/clampSeg/man/jsmurf.Rd | 53 +++++-- clampSeg-1.3-0/clampSeg/man/jules.Rd | 53 +++++-- clampSeg-1.3-0/clampSeg/man/lowpassFilter.Rd | 19 ++ clampSeg-1.3-0/clampSeg/man/stepDetection.Rd | 44 ++++-- clampSeg-1.3-0/clampSeg/tests/testthat.R | 7 - clampSeg-1.3-0/clampSeg/tests/testthat/test_cacheLocation.R |only 20 files changed, 414 insertions(+), 187 deletions(-)
Title: Word and Document Vector Models
Description: Create dense vector representation of words and documents using 'quanteda'. Implements Word2vec (Mikolov et al., 2013) <doi:10.48550/arXiv.1310.4546>, Doc2vec (Le & Mikolov, 2014) <doi:10.48550/arXiv.1405.4053> and Latent Semantic Analysis (Deerwester et al., 1990) <doi:10.1002/(SICI)1097-4571(199009)41:6%3C391::AID-ASI1%3E3.0.CO;2-9>.
Author: Kohei Watanabe [aut, cre, cph] ,
Jan Wijffels [aut] ,
BNOSAC [cph] ,
Max Fomichev [ctb, cph]
Maintainer: Kohei Watanabe <watanabe.kohei@gmail.com>
Diff between wordvector versions 0.6.4 dated 2026-09-10 and 0.6.5 dated 2026-10-08
DESCRIPTION | 8 - MD5 | 32 ++++--- NAMESPACE | 13 ++ NEWS.md | 7 + R/as.doc2vec.R | 97 ++++++++++++++++------ R/as.word2vec.R | 31 +++---- R/doc2vec.R | 6 - R/lsa.R | 21 ++-- R/object-builder.R |only R/utils.R | 25 +++++ R/word2vec.R | 94 --------------------- R/wordvector.R |only inst/WORDLIST | 6 + man/as.textmodel_doc2vec.Rd | 14 ++- man/check_model.Rd |only tests/testthat/test-as.doc2vec.R | 153 ++++++++++++++++++++++++++++------- tests/testthat/test-as.word2vec.R | 7 + tests/testthat/test-lsa.R | 16 ++- tests/testthat/test-object-builder.R |only 19 files changed, 326 insertions(+), 204 deletions(-)
Title: Access Nature Media Repositories
Description: Streamline searching, downloading and formatting of nature media files (e.g. audios, photos) from online repositories. The package offers functions for obtaining media metadata from online repositories, downloading associated media files and updating data sets with new records.
Author: Marcelo Araya-Salas [aut, cre] ,
Jorge Elizondo-Calvo [aut] ,
Alejandro Rico-Guevara [aut] ,
Hugo Gruson [rev] ,
Eric R Scott [rev]
Maintainer: Marcelo Araya-Salas <marcelo.araya@ucr.ac.cr>
Diff between suwo versions 0.2.1 dated 2026-04-20 and 0.2.2 dated 2026-10-08
DESCRIPTION | 25 MD5 | 91 +- NAMESPACE | 1 NEWS.md | 133 ++- R/access_wikiaves.R |only R/download_media.R | 33 R/find_duplicates.R | 43 - R/internal_functions.R | 392 ++++++++++- R/map_locations.R | 72 ++ R/query_gbif.R | 2 R/query_macaulay.R | 3 R/query_wikiaves.R | 248 +++++-- R/query_xenocanto.R | 131 +++ R/remove_duplicates.R | 7 R/sysdata.rda |binary R/template_params.R | 5 R/update_metadata.R | 62 + README.md | 208 +++--- build/vignette.rds |binary inst/CITATION | 8 inst/doc/suwo.Rmd | 815 ++++++++++++------------ inst/doc/suwo.html | 949 ++++++++++++---------------- inst/figures/logo.png |binary man/access_wikiaves.Rd |only man/download_media.Rd | 16 man/figures/logo.png |binary man/find_duplicates.Rd | 8 man/map_locations.Rd | 21 man/query_gbif.Rd | 1 man/query_wikiaves.Rd | 166 ++-- man/query_xenocanto.Rd | 64 + man/remove_duplicates.Rd | 7 man/template_params.Rd | 5 man/update_metadata.Rd | 53 + tests/testthat/test_download_media.R | 6 tests/testthat/test_internals.R | 4 tests/testthat/test_query_gbif.R | 2 tests/testthat/test_query_inaturalist.R | 2 tests/testthat/test_query_wikiaves.R | 40 - tests/testthat/test_query_xenocanto.R | 38 + tests/testthat/test_update_metadata.R | 27 tests/testthat/test_wikiaves_helpers.R |only vignettes/precompile.R | 10 vignettes/query_function_summary.txt | 10 vignettes/references.bib |only vignettes/suwo.Rmd | 815 ++++++++++++------------ vignettes/suwo.Rmd.orig | 88 ++ vignettes/workflow_diagram.png |binary vignettes/xenocanto_annotations_queries.rds |only 49 files changed, 2839 insertions(+), 1772 deletions(-)
Title: Supplementary Idiomatic Utilities and Extensions
Description: Miscellaneous supplementary functions designed to follow idiomatic 'R' conventions. Some functions are simple wrappers that reduce repetitive code, while others address common tasks or extend existing 'R' functions.
Author: Luke Jenkins [aut, cre, cph]
Maintainer: Luke Jenkins <luke-jenkins-dev@outlook.com>
Diff between suppr versions 1.0.1 dated 2026-09-07 and 1.1.0 dated 2026-10-08
DESCRIPTION | 6 MD5 | 15 + NAMESPACE | 254 ++++++++++++++++----------------- NEWS.md | 24 +-- R/character.r | 32 ++++ README.md | 12 - man/rm.prefix.Rd |only src/prefix_suffix.c |only src/suppr-package.c | 4 tests/testthat/test-rm.prefix_suffix.r |only 10 files changed, 197 insertions(+), 150 deletions(-)
Title: The Q Approach to Consensus Building
Description: Implements a workflow based on Q method to support
consensus-building processes. It prepares participant rankings, selects
and fits group perspectives, calculates consensus priority scores,
validates results by bootstrap resampling, and produces publication-ready
figures. The underlying method is described by Geschke et al. (2022)
"The Q approach to consensus building: integrating diverse perspectives
to guide decision-making" <doi:10.32942/X2F59S>.
Author: Jonas Geschke [aut, cre]
Maintainer: Jonas Geschke <hallo@qapproach.app>
Diff between qapproach versions 0.1.1 dated 2026-09-22 and 0.1.2 dated 2026-10-08
DESCRIPTION | 6 MD5 | 57 + NAMESPACE | 4 NEWS.md | 52 + R/analysis.R | 89 +- R/api-documentation.R | 22 R/validation.R | 483 +++++++++++-- R/visualization.R | 1084 ++++++++++++++++++++++++++++++ inst/COPYRIGHTS |only inst/doc/qapproach.pdf |binary inst/extdata |only man/agreement_across_levels.Rd |only man/plot_hierarchical_levels.Rd |only man/plot_sdg_cps.Rd |only man/plot_sdg_diamonds.Rd |only man/qapproach-bootstrap.Rd | 3 man/qapproach.Rd | 19 man/validate.Rd | 17 man/validation_cps.Rd | 7 man/validation_means.Rd | 23 tests/testthat/Rplots.pdf |only tests/testthat/test-bootstrap-alignment.R | 2 tests/testthat/test-prepare-rankings.R | 12 tests/testthat/test-validation-api.R | 200 +++++ tests/testthat/test-visualization-api.R | 170 ++++ 25 files changed, 2097 insertions(+), 153 deletions(-)
Title: 'Amazon Web Services' Security, Identity, & Compliance Services
Description: Interface to 'Amazon Web Services' security, identity, and
compliance services, including the 'Identity & Access Management'
('IAM') service for managing access to services and resources, and
more <https://aws.amazon.com/>.
Author: David Kretch [aut],
Adam Banker [aut],
Dyfan Jones [cre],
Amazon.com, Inc. [cph]
Maintainer: Dyfan Jones <dyfan.r.jones@gmail.com>
Diff between paws.security.identity versions 0.10.0 dated 2026-05-31 and 0.11.0 dated 2026-10-08
DESCRIPTION | 11 MD5 | 580 +++--- NAMESPACE | 36 R/accessanalyzer_interfaces.R | 207 -- R/accessanalyzer_operations.R | 117 - R/accessanalyzer_service.R | 6 R/account_interfaces.R | 102 - R/account_operations.R | 166 + R/account_service.R | 9 R/acm_interfaces.R | 299 ++- R/acm_operations.R | 845 +++++++++- R/acm_service.R | 29 R/acmpca_interfaces.R | 105 - R/acmpca_operations.R | 73 R/acmpca_service.R | 4 R/cleanroomsml_interfaces.R | 309 +-- R/cleanroomsml_operations.R | 177 +- R/cleanroomsml_service.R | 4 R/clouddirectory_interfaces.R | 393 +--- R/clouddirectory_operations.R | 198 +- R/clouddirectory_service.R | 6 R/cloudhsm_interfaces.R | 120 - R/cloudhsm_operations.R | 60 R/cloudhsm_service.R | 4 R/cloudhsmv2_interfaces.R | 108 - R/cloudhsmv2_operations.R | 54 R/cloudhsmv2_service.R | 6 R/cognitoidentity_interfaces.R | 126 - R/cognitoidentity_operations.R | 69 R/cognitoidentity_service.R | 6 R/cognitoidentityprovider_interfaces.R | 793 +++------ R/cognitoidentityprovider_operations.R | 799 +++++++-- R/cognitoidentityprovider_service.R | 16 R/cognitosync_interfaces.R | 99 - R/cognitosync_operations.R | 51 R/cognitosync_service.R | 4 R/detective_interfaces.R | 141 - R/detective_operations.R | 87 - R/detective_service.R | 6 R/directoryservice_interfaces.R | 480 +---- R/directoryservice_operations.R | 240 +- R/directoryservice_service.R | 4 R/fms_interfaces.R | 225 -- R/fms_operations.R | 126 - R/fms_service.R | 4 R/guardduty_interfaces.R | 663 +++---- R/guardduty_operations.R | 814 ++++++++- R/guardduty_service.R | 21 R/iam_interfaces.R | 835 +++------ R/iam_operations.R | 703 ++++++-- R/iam_service.R | 10 R/iamrolesanywhere_interfaces.R | 180 -- R/iamrolesanywhere_operations.R | 90 - R/iamrolesanywhere_service.R | 4 R/identitystore_interfaces.R | 144 - R/identitystore_operations.R | 259 ++- R/identitystore_service.R | 17 R/inspector2_interfaces.R | 510 ++---- R/inspector2_operations.R | 452 ++++- R/inspector2_service.R | 14 R/inspector_interfaces.R | 192 -- R/inspector_operations.R | 119 - R/inspector_service.R | 6 R/kms_interfaces.R | 282 +-- R/kms_operations.R | 164 + R/kms_service.R | 4 R/macie2_interfaces.R | 486 +---- R/macie2_operations.R | 243 +- R/macie2_service.R | 6 R/pcaconnectorad_interfaces.R | 117 - R/pcaconnectorad_operations.R | 75 R/pcaconnectorad_service.R | 4 R/ram_interfaces.R | 210 -- R/ram_operations.R | 105 - R/ram_service.R | 4 R/secretsmanager_interfaces.R | 132 - R/secretsmanager_operations.R | 69 R/secretsmanager_service.R | 4 R/securityhub_interfaces.R | 754 +++----- R/securityhub_operations.R | 698 ++++++-- R/securityhub_service.R | 16 R/securitylake_interfaces.R | 186 -- R/securitylake_operations.R | 93 - R/securitylake_service.R | 4 R/shield_interfaces.R | 216 -- R/shield_operations.R | 108 - R/shield_service.R | 4 R/sso_interfaces.R | 21 R/sso_operations.R | 12 R/sso_service.R | 4 R/ssoadmin_interfaces.R | 456 +---- R/ssoadmin_operations.R | 244 +- R/ssoadmin_service.R | 4 R/ssooidc_interfaces.R | 24 R/ssooidc_operations.R | 12 R/ssooidc_service.R | 6 R/sts_interfaces.R | 66 R/sts_operations.R | 63 R/sts_service.R | 12 R/sysdata.rda |only R/verifiedpermissions_interfaces.R | 204 -- R/verifiedpermissions_operations.R | 102 - R/verifiedpermissions_service.R | 4 R/waf_interfaces.R | 462 +---- R/waf_operations.R | 231 +- R/waf_service.R | 4 R/wafregional_interfaces.R | 486 +---- R/wafregional_operations.R | 243 +- R/wafregional_service.R | 4 R/wafv2_interfaces.R | 370 +--- R/wafv2_operations.R | 347 +++- R/wafv2_service.R | 8 man/accessanalyzer.Rd | 4 man/account.Rd | 9 man/account_get_primary_email_update_status.Rd |only man/account_send_phone_number_verification.Rd |only man/account_verify_phone_number.Rd |only man/acm.Rd | 29 man/acm_create_acme_domain_validation.Rd |only man/acm_create_acme_endpoint.Rd |only man/acm_create_acme_external_account_binding.Rd |only man/acm_delete_acme_domain_validation.Rd |only man/acm_delete_acme_endpoint.Rd |only man/acm_delete_acme_external_account_binding.Rd |only man/acm_describe_acme_account.Rd |only man/acm_describe_acme_domain_validation.Rd |only man/acm_describe_acme_endpoint.Rd |only man/acm_describe_acme_external_account_binding.Rd |only man/acm_get_acme_external_account_binding_credentials.Rd |only man/acm_list_acme_accounts.Rd |only man/acm_list_acme_domain_validations.Rd |only man/acm_list_acme_endpoints.Rd |only man/acm_list_acme_external_account_bindings.Rd |only man/acm_list_certificate_domain_validations.Rd |only man/acm_list_certificates.Rd | 3 man/acm_list_tags_for_resource.Rd |only man/acm_request_certificate.Rd | 4 man/acm_revoke_acme_account.Rd |only man/acm_revoke_acme_external_account_binding.Rd |only man/acm_tag_resource.Rd |only man/acm_untag_resource.Rd |only man/acm_update_acme_domain_validation.Rd |only man/acm_update_acme_endpoint.Rd |only man/acm_update_certificate_options.Rd | 6 man/acmpca.Rd | 4 man/acmpca_create_certificate_authority.Rd | 2 man/acmpca_update_certificate_authority.Rd | 2 man/cleanroomsml.Rd | 4 man/clouddirectory.Rd | 6 man/cloudhsm.Rd | 4 man/cloudhsmv2.Rd | 4 man/cognitoidentity.Rd | 4 man/cognitoidentityprovider.Rd | 14 man/cognitoidentityprovider_admin_delete_software_token.Rd |only man/cognitoidentityprovider_admin_get_user_auth_factors.Rd |only man/cognitoidentityprovider_admin_initiate_auth.Rd | 6 man/cognitoidentityprovider_admin_link_provider_for_user.Rd | 4 man/cognitoidentityprovider_create_identity_provider.Rd | 7 man/cognitoidentityprovider_create_user_import_job.Rd | 7 man/cognitoidentityprovider_create_user_pool.Rd | 25 man/cognitoidentityprovider_create_user_pool_client.Rd | 2 man/cognitoidentityprovider_create_user_pool_domain.Rd | 9 man/cognitoidentityprovider_create_user_pool_replica.Rd |only man/cognitoidentityprovider_delete_user_pool_replica.Rd |only man/cognitoidentityprovider_describe_terms_by_client.Rd |only man/cognitoidentityprovider_get_client_token.Rd |only man/cognitoidentityprovider_get_provisioned_limit.Rd |only man/cognitoidentityprovider_initiate_auth.Rd | 6 man/cognitoidentityprovider_list_user_pool_replicas.Rd |only man/cognitoidentityprovider_update_identity_provider.Rd | 7 man/cognitoidentityprovider_update_provisioned_limit.Rd |only man/cognitoidentityprovider_update_user_pool.Rd | 13 man/cognitoidentityprovider_update_user_pool_client.Rd | 2 man/cognitoidentityprovider_update_user_pool_domain.Rd | 5 man/cognitoidentityprovider_update_user_pool_replica.Rd |only man/cognitosync.Rd | 4 man/detective.Rd | 4 man/directoryservice.Rd | 4 man/fms.Rd | 4 man/guardduty.Rd | 19 man/guardduty_create_custom_detection_rule_association.Rd |only man/guardduty_create_custom_detection_rule_org_configuration.Rd |only man/guardduty_create_filter.Rd | 7 man/guardduty_create_investigation.Rd |only man/guardduty_delete_custom_detection_rule_association.Rd |only man/guardduty_delete_custom_detection_rule_org_configuration.Rd |only man/guardduty_get_custom_detection_rule.Rd |only man/guardduty_get_custom_detection_rule_association.Rd |only man/guardduty_get_custom_detection_rule_org_configuration.Rd |only man/guardduty_get_investigation.Rd |only man/guardduty_list_custom_detection_rule_associations.Rd |only man/guardduty_list_custom_detection_rule_org_configurations.Rd |only man/guardduty_list_custom_detection_rules.Rd |only man/guardduty_list_investigations.Rd |only man/guardduty_update_custom_detection_rule_association.Rd |only man/guardduty_update_custom_detection_rule_org_configuration.Rd |only man/guardduty_update_filter.Rd | 7 man/iam.Rd | 8 man/iam_acquire_role.Rd |only man/iam_create_service_specific_credential.Rd | 4 man/iam_get_account_properties.Rd |only man/iam_get_role_template_version.Rd |only man/iam_list_service_specific_credentials.Rd | 2 man/iam_put_account_properties.Rd |only man/iam_simulate_custom_policy.Rd | 11 man/iam_simulate_principal_policy.Rd | 13 man/iamrolesanywhere.Rd | 4 man/identitystore.Rd | 17 man/identitystore_create_group.Rd | 4 man/identitystore_create_group_membership.Rd | 8 man/identitystore_create_user.Rd | 4 man/identitystore_delete_group.Rd | 12 man/identitystore_delete_group_membership.Rd | 8 man/identitystore_delete_user.Rd | 12 man/identitystore_describe_group.Rd | 8 man/identitystore_describe_group_membership.Rd | 8 man/identitystore_describe_identity_store.Rd |only man/identitystore_describe_user.Rd | 8 man/identitystore_get_group_id.Rd | 4 man/identitystore_get_group_membership_id.Rd | 8 man/identitystore_get_user_id.Rd | 4 man/identitystore_is_member_in_groups.Rd | 8 man/identitystore_list_group_memberships.Rd | 10 man/identitystore_list_group_memberships_for_member.Rd | 8 man/identitystore_list_groups.Rd | 8 man/identitystore_list_identity_stores.Rd |only man/identitystore_list_users.Rd | 8 man/identitystore_update_group.Rd | 17 man/identitystore_update_identity_store.Rd |only man/identitystore_update_user.Rd | 12 man/inspector.Rd | 6 man/inspector2.Rd | 14 man/inspector2_create_connector.Rd |only man/inspector2_delete_connector.Rd |only man/inspector2_get_configuration.Rd | 9 man/inspector2_list_connector_scan_configurations.Rd |only man/inspector2_list_connectors.Rd |only man/inspector2_update_configuration.Rd | 12 man/inspector2_update_connector.Rd |only man/inspector2_update_connector_scan_configuration.Rd |only man/inspector_create_assessment_target.Rd | 2 man/inspector_create_assessment_template.Rd | 2 man/inspector_get_assessment_report.Rd | 2 man/inspector_list_assessment_targets.Rd | 2 man/kms.Rd | 4 man/kms_derive_shared_secret.Rd | 2 man/macie2.Rd | 4 man/pcaconnectorad.Rd | 4 man/ram.Rd | 4 man/secretsmanager.Rd | 4 man/securityhub.Rd | 14 man/securityhub_create_connector.Rd |only man/securityhub_delete_connector.Rd |only man/securityhub_describe_standards.Rd | 8 man/securityhub_disable_security_hub_feature_v2.Rd |only man/securityhub_disable_security_hub_v2.Rd | 2 man/securityhub_enable_security_hub_feature_v2.Rd |only man/securityhub_get_connector.Rd |only man/securityhub_get_enabled_standards.Rd | 5 man/securityhub_get_remediations_v2.Rd |only man/securityhub_list_connectors.Rd |only man/securityhub_list_connectors_v2.Rd | 5 man/securityhub_list_exposures_by_remediation_v2.Rd |only man/securityhub_list_free_trial_statuses_v2.Rd |only man/securityhub_list_security_control_definitions.Rd | 5 man/securityhub_update_connector.Rd |only man/securitylake.Rd | 4 man/shield.Rd | 4 man/sso.Rd | 4 man/ssoadmin.Rd | 4 man/ssoadmin_update_instance.Rd | 7 man/ssooidc.Rd | 6 man/sts.Rd | 12 man/sts_assume_role.Rd | 5 man/sts_assume_role_with_saml.Rd | 5 man/sts_assume_role_with_web_identity.Rd | 5 man/sts_assume_root.Rd | 9 man/sts_get_federation_token.Rd | 5 man/sts_get_session_token.Rd | 5 man/verifiedpermissions.Rd | 4 man/waf.Rd | 4 man/wafregional.Rd | 4 man/wafv2.Rd | 8 man/wafv2_associate_web_acl.Rd | 1 man/wafv2_create_rule_group.Rd | 5 man/wafv2_create_web_acl.Rd | 5 man/wafv2_disassociate_web_acl.Rd | 1 man/wafv2_get_revenue_statistics.Rd |only man/wafv2_get_revenue_statistics_summary.Rd |only man/wafv2_get_revenue_statistics_time_series.Rd |only man/wafv2_get_web_acl_for_resource.Rd | 1 man/wafv2_list_settlement_records.Rd |only man/wafv2_update_rule_group.Rd | 5 man/wafv2_update_web_acl.Rd | 5 tests/testthat.R |only tests/testthat/test_accessanalyzer.R | 4 tests/testthat/test_account.R | 4 tests/testthat/test_acm.R | 13 tests/testthat/test_acmpca.R | 4 tests/testthat/test_cleanroomsml.R | 8 tests/testthat/test_clouddirectory.R | 10 tests/testthat/test_cloudhsm.R | 2 tests/testthat/test_cloudhsmv2.R | 6 tests/testthat/test_cognitoidentity.R | 2 tests/testthat/test_cognitoidentityprovider.R | 2 tests/testthat/test_cognitosync.R | 4 tests/testthat/test_detective.R | 8 tests/testthat/test_directoryservice.R | 8 tests/testthat/test_fms.R | 2 tests/testthat/test_guardduty.R | 41 tests/testthat/test_iam.R | 19 tests/testthat/test_iamrolesanywhere.R | 6 tests/testthat/test_identitystore.R | 10 tests/testthat/test_inspector.R | 9 tests/testthat/test_inspector2.R | 25 tests/testthat/test_kms.R | 6 tests/testthat/test_macie2.R | 16 tests/testthat/test_pcaconnectorad.R | 6 tests/testthat/test_ram.R | 7 tests/testthat/test_secretsmanager.R | 4 tests/testthat/test_securityhub.R | 57 tests/testthat/test_securitylake.R | 6 tests/testthat/test_shield.R | 7 tests/testthat/test_sso.R | 2 tests/testthat/test_ssoadmin.R | 6 tests/testthat/test_ssooidc.R | 2 tests/testthat/test_sts.R | 2 tests/testthat/test_verifiedpermissions.R | 4 tests/testthat/test_waf.R | 15 tests/testthat/test_wafregional.R | 15 tests/testthat/test_wafv2.R | 2 331 files changed, 11874 insertions(+), 8867 deletions(-)
More information about paws.security.identity at CRAN
Permanent link
Title: 'Amazon Web Services' Machine Learning Services
Description: Interface to 'Amazon Web Services' machine learning services,
including 'SageMaker' managed machine learning service, natural
language processing, speech recognition, translation, and more
<https://aws.amazon.com/machine-learning/>.
Author: David Kretch [aut],
Adam Banker [aut],
Dyfan Jones [cre],
Amazon.com, Inc. [cph]
Maintainer: Dyfan Jones <dyfan.r.jones@gmail.com>
Diff between paws.machine.learning versions 0.10.0 dated 2026-05-30 and 0.11.0 dated 2026-10-08
paws.machine.learning-0.10.0/paws.machine.learning/R/panorama_interfaces.R |only paws.machine.learning-0.10.0/paws.machine.learning/R/panorama_operations.R |only paws.machine.learning-0.10.0/paws.machine.learning/R/panorama_service.R |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_create_application_instance.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_create_job_for_devices.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_create_node_from_template_job.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_create_package.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_create_package_import_job.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_delete_device.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_delete_package.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_deregister_package_version.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_describe_application_instance.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_describe_application_instance_details.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_describe_device.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_describe_device_job.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_describe_node.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_describe_node_from_template_job.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_describe_package.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_describe_package_import_job.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_describe_package_version.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_list_application_instance_dependencies.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_list_application_instance_node_instances.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_list_application_instances.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_list_devices.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_list_devices_jobs.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_list_node_from_template_jobs.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_list_nodes.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_list_package_import_jobs.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_list_packages.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_list_tags_for_resource.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_provision_device.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_register_package_version.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_remove_application_instance.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_signal_application_instance_node_instances.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_tag_resource.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_untag_resource.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/man/panorama_update_device_metadata.Rd |only paws.machine.learning-0.10.0/paws.machine.learning/tests/testthat/test_panorama.R |only paws.machine.learning-0.11.0/paws.machine.learning/DESCRIPTION | 18 paws.machine.learning-0.11.0/paws.machine.learning/MD5 | 643 +- paws.machine.learning-0.11.0/paws.machine.learning/NAMESPACE | 37 paws.machine.learning-0.11.0/paws.machine.learning/R/augmentedairuntime_interfaces.R | 30 paws.machine.learning-0.11.0/paws.machine.learning/R/augmentedairuntime_operations.R | 15 paws.machine.learning-0.11.0/paws.machine.learning/R/augmentedairuntime_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrock_interfaces.R | 656 +- paws.machine.learning-0.11.0/paws.machine.learning/R/bedrock_operations.R | 443 + paws.machine.learning-0.11.0/paws.machine.learning/R/bedrock_service.R | 16 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockagent_interfaces.R | 502 -- paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockagent_operations.R | 500 +- paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockagent_service.R | 15 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockagentcore_interfaces.R | 410 - paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockagentcore_operations.R | 338 + paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockagentcore_service.R | 6 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockagentcorecontrol_interfaces.R | 1122 ++-- paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockagentcorecontrol_operations.R | 1506 +++++- paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockagentcorecontrol_service.R | 48 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockagentruntime_interfaces.R | 226 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockagentruntime_operations.R | 260 - paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockagentruntime_service.R | 14 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockdataautomation_interfaces.R | 162 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockdataautomation_operations.R | 81 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockdataautomation_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockdataautomationruntime_interfaces.R | 36 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockdataautomationruntime_operations.R | 18 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockdataautomationruntime_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockruntime_interfaces.R | 70 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockruntime_operations.R | 63 paws.machine.learning-0.11.0/paws.machine.learning/R/bedrockruntime_service.R | 5 paws.machine.learning-0.11.0/paws.machine.learning/R/comprehend_interfaces.R | 510 -- paws.machine.learning-0.11.0/paws.machine.learning/R/comprehend_operations.R | 255 - paws.machine.learning-0.11.0/paws.machine.learning/R/comprehend_service.R | 6 paws.machine.learning-0.11.0/paws.machine.learning/R/comprehendmedical_interfaces.R | 156 paws.machine.learning-0.11.0/paws.machine.learning/R/comprehendmedical_operations.R | 78 paws.machine.learning-0.11.0/paws.machine.learning/R/comprehendmedical_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/forecastqueryservice_interfaces.R | 12 paws.machine.learning-0.11.0/paws.machine.learning/R/forecastqueryservice_operations.R | 6 paws.machine.learning-0.11.0/paws.machine.learning/R/forecastqueryservice_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/forecastservice_interfaces.R | 330 - paws.machine.learning-0.11.0/paws.machine.learning/R/forecastservice_operations.R | 189 paws.machine.learning-0.11.0/paws.machine.learning/R/forecastservice_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/frauddetector_interfaces.R | 435 - paws.machine.learning-0.11.0/paws.machine.learning/R/frauddetector_operations.R | 219 paws.machine.learning-0.11.0/paws.machine.learning/R/frauddetector_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/lexmodelbuildingservice_interfaces.R | 225 paws.machine.learning-0.11.0/paws.machine.learning/R/lexmodelbuildingservice_operations.R | 126 paws.machine.learning-0.11.0/paws.machine.learning/R/lexmodelbuildingservice_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/lexmodelsv2_interfaces.R | 630 -- paws.machine.learning-0.11.0/paws.machine.learning/R/lexmodelsv2_operations.R | 333 - paws.machine.learning-0.11.0/paws.machine.learning/R/lexmodelsv2_service.R | 32 paws.machine.learning-0.11.0/paws.machine.learning/R/lexruntimeservice_interfaces.R | 30 paws.machine.learning-0.11.0/paws.machine.learning/R/lexruntimeservice_operations.R | 15 paws.machine.learning-0.11.0/paws.machine.learning/R/lexruntimeservice_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/lexruntimev2_interfaces.R | 36 paws.machine.learning-0.11.0/paws.machine.learning/R/lexruntimev2_operations.R | 18 paws.machine.learning-0.11.0/paws.machine.learning/R/lexruntimev2_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/lookoutequipment_interfaces.R | 261 - paws.machine.learning-0.11.0/paws.machine.learning/R/lookoutequipment_operations.R | 147 paws.machine.learning-0.11.0/paws.machine.learning/R/lookoutequipment_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/machinelearning_interfaces.R | 168 paws.machine.learning-0.11.0/paws.machine.learning/R/machinelearning_operations.R | 84 paws.machine.learning-0.11.0/paws.machine.learning/R/machinelearning_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/personalize_interfaces.R | 396 - paws.machine.learning-0.11.0/paws.machine.learning/R/personalize_operations.R | 213 paws.machine.learning-0.11.0/paws.machine.learning/R/personalize_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/personalizeevents_interfaces.R | 15 paws.machine.learning-0.11.0/paws.machine.learning/R/personalizeevents_operations.R | 15 paws.machine.learning-0.11.0/paws.machine.learning/R/personalizeevents_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/personalizeruntime_interfaces.R | 18 paws.machine.learning-0.11.0/paws.machine.learning/R/personalizeruntime_operations.R | 9 paws.machine.learning-0.11.0/paws.machine.learning/R/personalizeruntime_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/polly_interfaces.R | 60 paws.machine.learning-0.11.0/paws.machine.learning/R/polly_operations.R | 30 paws.machine.learning-0.11.0/paws.machine.learning/R/polly_service.R | 6 paws.machine.learning-0.11.0/paws.machine.learning/R/rekognition_interfaces.R | 450 - paws.machine.learning-0.11.0/paws.machine.learning/R/rekognition_operations.R | 279 - paws.machine.learning-0.11.0/paws.machine.learning/R/rekognition_service.R | 50 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemaker_interfaces.R | 2270 +++------- paws.machine.learning-0.11.0/paws.machine.learning/R/sagemaker_operations.R | 1538 ++++-- paws.machine.learning-0.11.0/paws.machine.learning/R/sagemaker_service.R | 12 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakeredgemanager_interfaces.R | 15 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakeredgemanager_operations.R | 9 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakeredgemanager_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakerfeaturestoreruntime_interfaces.R | 47 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakerfeaturestoreruntime_operations.R | 122 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakerfeaturestoreruntime_service.R | 9 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakergeospatialcapabilities_interfaces.R | 114 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakergeospatialcapabilities_operations.R | 57 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakergeospatialcapabilities_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakermetrics_interfaces.R | 12 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakermetrics_operations.R | 6 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakermetrics_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakerruntime_interfaces.R | 18 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakerruntime_operations.R | 34 paws.machine.learning-0.11.0/paws.machine.learning/R/sagemakerruntime_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/R/sysdata.rda |only paws.machine.learning-0.11.0/paws.machine.learning/R/textract_interfaces.R | 150 paws.machine.learning-0.11.0/paws.machine.learning/R/textract_operations.R | 77 paws.machine.learning-0.11.0/paws.machine.learning/R/textract_service.R | 6 paws.machine.learning-0.11.0/paws.machine.learning/R/transcribeservice_interfaces.R | 247 - paws.machine.learning-0.11.0/paws.machine.learning/R/transcribeservice_operations.R | 201 paws.machine.learning-0.11.0/paws.machine.learning/R/transcribeservice_service.R | 7 paws.machine.learning-0.11.0/paws.machine.learning/R/translate_interfaces.R | 111 paws.machine.learning-0.11.0/paws.machine.learning/R/translate_operations.R | 57 paws.machine.learning-0.11.0/paws.machine.learning/R/translate_service.R | 6 paws.machine.learning-0.11.0/paws.machine.learning/R/voiceid_interfaces.R | 162 paws.machine.learning-0.11.0/paws.machine.learning/R/voiceid_operations.R | 87 paws.machine.learning-0.11.0/paws.machine.learning/R/voiceid_service.R | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/augmentedairuntime.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrock.Rd | 16 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrock_batch_delete_advanced_prompt_optimization_job.Rd | 6 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrock_create_advanced_prompt_optimization_job.Rd | 20 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrock_create_custom_model.Rd | 13 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrock_get_account_data_retention.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrock_get_advanced_prompt_optimization_job.Rd | 6 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrock_list_advanced_prompt_optimization_jobs.Rd | 12 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrock_put_account_data_retention.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrock_stop_advanced_prompt_optimization_job.Rd | 6 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagent.Rd | 15 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagent_create_agent.Rd | 7 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagent_create_data_source.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagent_create_vpc_configuration.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagent_delete_resource_policy.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagent_delete_vpc_configuration.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagent_get_flow.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagent_get_flow_version.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagent_get_prompt.Rd | 8 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagent_get_resource_policy.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagent_get_vpc_configuration.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagent_list_vpc_configurations.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagent_put_resource_policy.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcore.Rd | 6 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcore_create_ab_test.Rd | 5 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcore_create_event.Rd | 10 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcore_delete_capacity_provider_session.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcore_delete_memory_record.Rd | 8 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcore_get_memory_record.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcore_ingest_data.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcore_invoke_agent_runtime.Rd | 11 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcore_invoke_harness.Rd | 18 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcore_start_batch_evaluation.Rd | 14 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcore_start_browser_session.Rd | 3 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcore_start_code_interpreter_session.Rd | 3 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcore_start_recommendation.Rd | 8 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol.Rd | 48 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_add_dataset_examples.Rd | 2 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_batch_put_gateway_rate_limits.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_agent_runtime.Rd | 12 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_api_key_credential_provider.Rd | 10 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_browser.Rd | 3 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_capacity_provider.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_code_interpreter.Rd | 3 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_configuration_bundle.Rd | 3 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_consent_portal.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_dataset.Rd | 10 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_dataset_version.Rd | 2 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_gateway_rate_limit.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_gateway_target.Rd | 9 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_harness.Rd | 7 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_harness_endpoint.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_memory.Rd | 3 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_online_evaluation_config.Rd | 13 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_payment_connector.Rd | 7 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_payment_manager.Rd | 5 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_create_policy.Rd | 7 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_delete_agent_runtime.Rd | 8 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_delete_agent_runtime_endpoint.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_delete_capacity_provider.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_delete_consent_portal.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_delete_dataset.Rd | 7 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_delete_dataset_examples.Rd | 2 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_delete_gateway_rate_limit.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_delete_harness.Rd | 8 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_delete_harness_endpoint.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_delete_memory.Rd | 2 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_get_capacity_provider.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_get_consent_portal.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_get_dataset.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_get_gateway_rate_limit.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_get_harness.Rd | 8 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_get_harness_endpoint.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_get_policy_generation.Rd | 2 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_list_agen_runt_vers_by_capa_prov.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_list_capacity_providers.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_list_consent_portals.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_list_dataset_examples.Rd | 6 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_list_datasets.Rd | 2 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_list_gateway_rate_limits.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_list_harness_endpoints.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_list_harness_versions.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_list_harnesses.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_list_policy_generation_assets.Rd | 2 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_rotate_payment_connector_credentials.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_start_policy_generation.Rd | 6 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_agent_runtime.Rd | 10 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_api_key_credential_provider.Rd | 13 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_capacity_provider.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_configuration_bundle.Rd | 13 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_consent_portal.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_dataset.Rd | 2 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_dataset_examples.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_gateway.Rd | 8 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_gateway_rate_limit.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_gateway_target.Rd | 9 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_harness.Rd | 7 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_harness_endpoint.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_memory.Rd | 3 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_online_evaluation_config.Rd | 9 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_payment_manager.Rd | 5 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentcorecontrol_update_policy.Rd | 7 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentruntime.Rd | 14 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentruntime_agentic_retrieve_stream.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentruntime_check_ingested_document_acl.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentruntime_get_document_content.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentruntime_get_ingested_document_acl.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentruntime_invoke_agent.Rd | 5 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentruntime_retrieve.Rd | 5 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentruntime_retrieve_and_generate.Rd | 5 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockagentruntime_retrieve_and_generate_stream.Rd | 5 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockdataautomation.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockdataautomationruntime.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockruntime.Rd | 5 paws.machine.learning-0.11.0/paws.machine.learning/man/bedrockruntime_invoke_guardrail_checks.Rd |only paws.machine.learning-0.11.0/paws.machine.learning/man/comprehend.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/comprehendmedical.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/forecastqueryservice.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/forecastservice.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/frauddetector.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/lexmodelbuildingservice.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/lexmodelsv2.Rd | 33 paws.machine.learning-0.11.0/paws.machine.learning/man/lexmodelsv2_create_bot_locale.Rd | 5 paws.machine.learning-0.11.0/paws.machine.learning/man/lexmodelsv2_create_resource_policy_statement.Rd | 2 paws.machine.learning-0.11.0/paws.machine.learning/man/lexmodelsv2_update_bot_locale.Rd | 5 paws.machine.learning-0.11.0/paws.machine.learning/man/lexruntimeservice.Rd | 4 paws.machine.learning-0.11.0/paws.machine.learning/man/lexruntimev2.Rd | 4 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More information about paws.machine.learning at CRAN
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Title: Latent Variable Analysis
Description: Fit a variety of latent variable models, including confirmatory
factor analysis, structural equation modeling and latent growth curve models.
Author: Yves Rosseel [aut, cre] ,
Terrence D. Jorgensen [aut] ,
Luc De Wilde [aut],
Daniel Oberski [ctb],
Jarrett Byrnes [ctb],
Leonard Vanbrabant [ctb],
Victoria Savalei [ctb],
Ed Merkle [ctb],
Michael Hallquist [ctb],
Mijke Rhemtulla [ctb],
Myrsini Katsika [...truncated...]
Maintainer: Yves Rosseel <Yves.Rosseel@UGent.be>
Diff between lavaan versions 0.7-2 dated 2026-07-16 and 0.7-3 dated 2026-10-08
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lavaan-0.7-3/lavaan/R/lav_model_vcov.R | 253 +- lavaan-0.7-3/lavaan/R/lav_model_wls.R | 25 lavaan-0.7-3/lavaan/R/lav_modification.R | 2 lavaan-0.7-3/lavaan/R/lav_msg.R | 12 lavaan-0.7-3/lavaan/R/lav_muthen1984.R | 234 + lavaan-0.7-3/lavaan/R/lav_mvnorm_cluster.R | 270 +- lavaan-0.7-3/lavaan/R/lav_mvnorm_cluster_kernels.R | 54 lavaan-0.7-3/lavaan/R/lav_mvnorm_cluster_missing.R | 74 lavaan-0.7-3/lavaan/R/lav_mvnorm_cluster_missing_louis.R | 24 lavaan-0.7-3/lavaan/R/lav_mvnorm_cluster_rs.R | 72 lavaan-0.7-3/lavaan/R/lav_mvnorm_missing_h1.R | 4 lavaan-0.7-3/lavaan/R/lav_mvreg_cluster.R | 88 lavaan-0.7-3/lavaan/R/lav_object_check_version.R | 24 lavaan-0.7-3/lavaan/R/lav_object_generate.R | 16 lavaan-0.7-3/lavaan/R/lav_object_inspect.R | 221 + lavaan-0.7-3/lavaan/R/lav_object_inspect_constraints.R |only lavaan-0.7-3/lavaan/R/lav_object_inspect_sampstat.R |only lavaan-0.7-3/lavaan/R/lav_object_methods.R | 94 lavaan-0.7-3/lavaan/R/lav_object_post_check.R | 94 lavaan-0.7-3/lavaan/R/lav_object_summary.R | 27 lavaan-0.7-3/lavaan/R/lav_objective.R | 4 lavaan-0.7-3/lavaan/R/lav_optim_gn.R | 14 lavaan-0.7-3/lavaan/R/lav_optim_noniter.R | 39 lavaan-0.7-3/lavaan/R/lav_optim_noniter_vcov.R |only lavaan-0.7-3/lavaan/R/lav_options.R | 354 ++ lavaan-0.7-3/lavaan/R/lav_options_default.R | 36 lavaan-0.7-3/lavaan/R/lav_options_estimator.R | 589 ++++ lavaan-0.7-3/lavaan/R/lav_options_mimic.R | 22 lavaan-0.7-3/lavaan/R/lav_options_se.R | 14 lavaan-0.7-3/lavaan/R/lav_partable.R | 82 lavaan-0.7-3/lavaan/R/lav_partable_bounds.R | 102 lavaan-0.7-3/lavaan/R/lav_partable_constraints.R | 13 lavaan-0.7-3/lavaan/R/lav_partable_dv.R |only lavaan-0.7-3/lavaan/R/lav_partable_flat.R | 26 lavaan-0.7-3/lavaan/R/lav_partable_marker.R | 184 + lavaan-0.7-3/lavaan/R/lav_partable_random.R | 8 lavaan-0.7-3/lavaan/R/lav_partable_unrestricted.R | 15 lavaan-0.7-3/lavaan/R/lav_partable_utils.R | 54 lavaan-0.7-3/lavaan/R/lav_partable_vnames.R | 6 lavaan-0.7-3/lavaan/R/lav_pml_utils.R | 7 lavaan-0.7-3/lavaan/R/lav_predict.R | 251 +- lavaan-0.7-3/lavaan/R/lav_predict_mdist.R | 4 lavaan-0.7-3/lavaan/R/lav_predict_y.R | 12 lavaan-0.7-3/lavaan/R/lav_print.R | 290 +- lavaan-0.7-3/lavaan/R/lav_representation_lisrel.R | 331 ++ lavaan-0.7-3/lavaan/R/lav_representation_ram.R | 33 lavaan-0.7-3/lavaan/R/lav_rescale.R |only lavaan-0.7-3/lavaan/R/lav_residuals.R | 27 lavaan-0.7-3/lavaan/R/lav_sam_step0.R | 132 - lavaan-0.7-3/lavaan/R/lav_sam_step1.R | 96 lavaan-0.7-3/lavaan/R/lav_sam_step1_local.R | 737 +++++- lavaan-0.7-3/lavaan/R/lav_sam_step2.R | 195 + lavaan-0.7-3/lavaan/R/lav_sam_step2_se.R | 124 - lavaan-0.7-3/lavaan/R/lav_sam_utils.R | 855 ++++++- lavaan-0.7-3/lavaan/R/lav_samplestats.R | 449 +++ lavaan-0.7-3/lavaan/R/lav_samplestats_gamma.R | 604 +++-- lavaan-0.7-3/lavaan/R/lav_samplestats_gamma_recipe.R | 26 lavaan-0.7-3/lavaan/R/lav_samplestats_icov.R | 4 lavaan-0.7-3/lavaan/R/lav_samplestats_igamma.R | 6 lavaan-0.7-3/lavaan/R/lav_samplestats_wls_2l_cat.R | 4 lavaan-0.7-3/lavaan/R/lav_samplestats_wls_obs.R | 20 lavaan-0.7-3/lavaan/R/lav_scores.R | 2 lavaan-0.7-3/lavaan/R/lav_sem_js.R |only lavaan-0.7-3/lavaan/R/lav_sem_js_deriv.R |only lavaan-0.7-3/lavaan/R/lav_sem_miiv.R | 587 ++++ lavaan-0.7-3/lavaan/R/lav_sem_miiv_utils.R | 518 ++++ lavaan-0.7-3/lavaan/R/lav_standardize.R | 6 lavaan-0.7-3/lavaan/R/lav_start.R | 111 lavaan-0.7-3/lavaan/R/lav_syntax.R | 17 lavaan-0.7-3/lavaan/R/lav_syntax_parser.R | 29 lavaan-0.7-3/lavaan/R/lav_syntax_parser_open.R | 48 lavaan-0.7-3/lavaan/R/lav_test.R | 65 lavaan-0.7-3/lavaan/R/lav_test_LRT.R | 224 + lavaan-0.7-3/lavaan/R/lav_test_browne.R | 120 - lavaan-0.7-3/lavaan/R/lav_test_fmg.R | 4 lavaan-0.7-3/lavaan/R/lav_test_hayakawa.R | 88 lavaan-0.7-3/lavaan/R/lav_test_net.R |only lavaan-0.7-3/lavaan/R/lav_test_satorra_bentler.R | 34 lavaan-0.7-3/lavaan/R/lav_test_utils.R | 37 lavaan-0.7-3/lavaan/R/lav_test_yuan_bentler.R | 11 lavaan-0.7-3/lavaan/R/lav_utils.R | 92 lavaan-0.7-3/lavaan/R/lav_vcov_hc.R |only lavaan-0.7-3/lavaan/R/xxx_efa.R | 9 lavaan-0.7-3/lavaan/R/xxx_lavaan.R | 206 + lavaan-0.7-3/lavaan/R/xxx_sam.R | 340 ++ lavaan-0.7-3/lavaan/README.md | 14 lavaan-0.7-3/lavaan/inst/rbm_sem.R | 4 lavaan-0.7-3/lavaan/inst/understanding_lavaan_internals.R | 2 lavaan-0.7-3/lavaan/man/bootstrap.Rd | 2 lavaan-0.7-3/lavaan/man/cfa.Rd | 18 lavaan-0.7-3/lavaan/man/efa.Rd | 14 lavaan-0.7-3/lavaan/man/estimator_iv.Rd | 79 lavaan-0.7-3/lavaan/man/estimator_js.Rd |only lavaan-0.7-3/lavaan/man/fitMeasures.Rd | 102 lavaan-0.7-3/lavaan/man/growth.Rd | 16 lavaan-0.7-3/lavaan/man/lavEffects.Rd | 8 lavaan-0.7-3/lavaan/man/lavH1.Rd |only lavaan-0.7-3/lavaan/man/lavInspect.Rd | 421 ++- lavaan-0.7-3/lavaan/man/lavListInspect.Rd | 12 lavaan-0.7-3/lavaan/man/lavNames.Rd | 43 lavaan-0.7-3/lavaan/man/lavOptions.Rd | 515 +++- lavaan-0.7-3/lavaan/man/lavPredict.Rd | 29 lavaan-0.7-3/lavaan/man/lavResiduals.Rd | 15 lavaan-0.7-3/lavaan/man/lavTestLRT.Rd | 69 lavaan-0.7-3/lavaan/man/lavTestNET.Rd |only lavaan-0.7-3/lavaan/man/lav_constraints.Rd | 8 lavaan-0.7-3/lavaan/man/lav_export_estimation.Rd | 4 lavaan-0.7-3/lavaan/man/lav_partable.Rd | 6 lavaan-0.7-3/lavaan/man/lav_scores.Rd | 2 lavaan-0.7-3/lavaan/man/lavaan-class.Rd | 14 lavaan-0.7-3/lavaan/man/lavaan.Rd | 8 lavaan-0.7-3/lavaan/man/mimic.Rd | 59 lavaan-0.7-3/lavaan/man/model.syntax.Rd | 82 lavaan-0.7-3/lavaan/man/parameterEstimates.Rd | 16 lavaan-0.7-3/lavaan/man/sam.Rd | 163 + lavaan-0.7-3/lavaan/man/sem.Rd | 18 lavaan-0.7-3/lavaan/man/simulateData.Rd | 19 lavaan-0.7-3/lavaan/man/standardizedSolution.Rd | 22 168 files changed, 13012 insertions(+), 3096 deletions(-)
More information about KeyNubLicDongle at CRAN
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Title: Predicting Invasion Probabilities from Phylogenetic Data and
Species Traits
Description: A phylogenetic modelling approach for predicting species invasion risk, out of
a given pool of local species where a subset is known to be invasive elsewhere.
The package uses phylogenetic signal estimation and phylogenetic linear and logistic models
to estimate probabilities of being invasive based on phylogeny and any set of additional
predictors. A ranking method is implemented to evaluate prioritisation strategies. A manuscript
describing these methods, by Shahar Dubiner and Tamar Guy-Haim, is in preparation.
Author: Shahar Dubiner [aut, cre]
Maintainer: Shahar Dubiner <dubiner@mail.tau.ac.il>
Diff between invasible versions 0.1.1 dated 2026-08-05 and 1.0.0 dated 2026-10-08
DESCRIPTION | 6 MD5 | 14 - R/globals.R | 3 R/invasion_signal.R | 154 +++++++-------- R/predict_invasible.R | 355 ++++++++++++++++++----------------- R/prepare_invasible.R | 465 +++++++++++++++++++++++++++++++++++++++-------- man/predict_invasible.Rd | 8 man/prepare_invasible.Rd | 56 ++++- 8 files changed, 705 insertions(+), 356 deletions(-)
Title: The Gauss Hypergeometric Function
Description: The Gaussian hypergeometric function for complex numbers.
Author: Robin K. S. Hankin [aut, cre] ,
Richard D. Morey [ctb]
Maintainer: Robin K. S. Hankin <hankin.robin@gmail.com>
Diff between hypergeo versions 1.2-14 dated 2025-03-24 and 1.2-15 dated 2026-10-08
hypergeo-1.2-14/hypergeo/inst/doc/hypergeometric.R |only hypergeo-1.2-14/hypergeo/inst/doc/hypergeometric.Rnw |only hypergeo-1.2-14/hypergeo/inst/doc/hypergeometric.pdf |only hypergeo-1.2-14/hypergeo/tests/aaa.R |only hypergeo-1.2-14/hypergeo/tests/aab.R |only hypergeo-1.2-14/hypergeo/vignettes/hypergeometric.Rnw |only hypergeo-1.2-15/hypergeo/DESCRIPTION | 28 +++-- hypergeo-1.2-15/hypergeo/MD5 | 77 ++++++++----- hypergeo-1.2-15/hypergeo/NAMESPACE | 5 hypergeo-1.2-15/hypergeo/NEWS.md |only hypergeo-1.2-15/hypergeo/R/RcppExports.R |only hypergeo-1.2-15/hypergeo/R/complex_gamma.R | 47 ++------ hypergeo-1.2-15/hypergeo/R/hypergeo.R | 100 +++++++----------- hypergeo-1.2-15/hypergeo/README.md |only hypergeo-1.2-15/hypergeo/build/partial.rdb |only hypergeo-1.2-15/hypergeo/build/vignette.rds |binary hypergeo-1.2-15/hypergeo/inst/CITATION |only hypergeo-1.2-15/hypergeo/inst/doc/hypergeo.R |only hypergeo-1.2-15/hypergeo/inst/doc/hypergeo.Rnw |only hypergeo-1.2-15/hypergeo/inst/doc/hypergeo.pdf |only hypergeo-1.2-15/hypergeo/inst/include |only hypergeo-1.2-15/hypergeo/man/buhring.Rd | 2 hypergeo-1.2-15/hypergeo/man/complex_gamma.Rd | 12 +- hypergeo-1.2-15/hypergeo/man/cpp.Rd |only hypergeo-1.2-15/hypergeo/man/f15.1.20.Rd |only hypergeo-1.2-15/hypergeo/man/f15.3.1.Rd | 10 + hypergeo-1.2-15/hypergeo/man/f15.3.3.Rd | 7 + hypergeo-1.2-15/hypergeo/man/f15.5.1.Rd | 2 hypergeo-1.2-15/hypergeo/man/figures |only hypergeo-1.2-15/hypergeo/man/genhypergeo.Rd | 14 ++ hypergeo-1.2-15/hypergeo/man/gosper.Rd | 2 hypergeo-1.2-15/hypergeo/man/hypergeo-package.Rd | 40 +++---- hypergeo-1.2-15/hypergeo/man/hypergeo.Rd | 2 hypergeo-1.2-15/hypergeo/man/hypergeo_A_nonpos_int.Rd | 6 - hypergeo-1.2-15/hypergeo/man/hypergeo_contfrac.Rd | 2 hypergeo-1.2-15/hypergeo/man/hypergeo_cover1.Rd | 8 - hypergeo-1.2-15/hypergeo/man/hypergeo_powerseries.Rd | 5 hypergeo-1.2-15/hypergeo/man/is.nonpos.Rd | 7 - hypergeo-1.2-15/hypergeo/man/residue.Rd | 10 - hypergeo-1.2-15/hypergeo/man/wolfram.Rd | 6 - hypergeo-1.2-15/hypergeo/src |only hypergeo-1.2-15/hypergeo/tests/testthat |only hypergeo-1.2-15/hypergeo/tests/testthat.R |only hypergeo-1.2-15/hypergeo/vignettes/hypergeo.Rnw |only hypergeo-1.2-15/hypergeo/vignettes/hypergeometric.bib | 29 ++++- 45 files changed, 232 insertions(+), 189 deletions(-)
More information about heterogeneouspeereffects at CRAN
Permanent link
Title: Grammar of Graphics for SQL
Description: Allows you to write queries that combine SQL (Structured Query
Language) data retrieval with visualization specifications in a single,
composable syntax. The 'ggsql' package binds directly with the 'ggsql' 'Rust'
library and allows you to set up readers and writers and execute queries
against it. The package also offers 'knitr' and 'shiny' integration allowing
the user to use 'ggsql' in both frameworks.
Author: Thomas Lin Pedersen [aut, cre] ,
George Stagg [aut] ,
Teun van den Brand [aut] ,
Posit, PBC [cph, fnd]
Maintainer: Thomas Lin Pedersen <thomas.pedersen@posit.co>
Diff between ggsql versions 0.3.3 dated 2026-06-03 and 0.5.2 dated 2026-10-08
ggsql-0.3.3/ggsql/R/vega-versions.R |only ggsql-0.3.3/ggsql/inst/htmlwidgets/ggsql_vega.css |only ggsql-0.3.3/ggsql/inst/htmlwidgets/ggsql_vega.js |only ggsql-0.3.3/ggsql/inst/htmlwidgets/lib/vega |only ggsql-0.3.3/ggsql/inst/htmlwidgets/lib/vega-embed |only ggsql-0.3.3/ggsql/inst/htmlwidgets/lib/vega-lite |only ggsql-0.3.3/ggsql/src/rust/vendor.tar.xz.sha256 |only ggsql-0.5.2/ggsql/DESCRIPTION | 12 ggsql-0.5.2/ggsql/MD5 | 78 ggsql-0.5.2/ggsql/NAMESPACE | 5 ggsql-0.5.2/ggsql/NEWS.md | 29 ggsql-0.5.2/ggsql/R/aaa.R | 1 ggsql-0.5.2/ggsql/R/engine.R | 43 ggsql-0.5.2/ggsql/R/extendr-wrappers.R | 8 ggsql-0.5.2/ggsql/R/hep-version.R |only ggsql-0.5.2/ggsql/R/render.R | 140 - ggsql-0.5.2/ggsql/R/shiny.R | 8 ggsql-0.5.2/ggsql/R/spec.R | 17 ggsql-0.5.2/ggsql/R/widget.R | 77 ggsql-0.5.2/ggsql/R/writer.R | 94 - ggsql-0.5.2/ggsql/R/zzz.R | 8 ggsql-0.5.2/ggsql/README.md | 28 ggsql-0.5.2/ggsql/inst/doc/engine.html | 1207 +++++++++---- ggsql-0.5.2/ggsql/inst/doc/ggsql.html | 1205 +++++++++--- ggsql-0.5.2/ggsql/inst/htmlwidgets/ggsql_hep.js |only ggsql-0.5.2/ggsql/inst/htmlwidgets/lib/hephaestus-svg |only ggsql-0.5.2/ggsql/man/figures/README-unnamed-chunk-2-1.svg | 2 ggsql-0.5.2/ggsql/man/figures/README-unnamed-chunk-3-1.svg | 2 ggsql-0.5.2/ggsql/man/figures/README-unnamed-chunk-4-1.svg |only ggsql-0.5.2/ggsql/man/ggsql_render.Rd | 11 ggsql-0.5.2/ggsql/man/ggsql_save.Rd | 19 ggsql-0.5.2/ggsql/man/ggsql_widget.Rd |only ggsql-0.5.2/ggsql/man/svg_writer.Rd |only ggsql-0.5.2/ggsql/man/vegalite_writer.Rd | 10 ggsql-0.5.2/ggsql/src/Makevars.win.in | 4 ggsql-0.5.2/ggsql/src/rust/Cargo.lock | 692 ++++++- ggsql-0.5.2/ggsql/src/rust/Cargo.toml | 8 ggsql-0.5.2/ggsql/src/rust/build-env-win.sh | 3 ggsql-0.5.2/ggsql/src/rust/src/lib.rs | 75 ggsql-0.5.2/ggsql/tests/testthat/test-engine.R | 77 ggsql-0.5.2/ggsql/tests/testthat/test-spec.R | 27 ggsql-0.5.2/ggsql/tests/testthat/test-validate.R | 2 ggsql-0.5.2/ggsql/tests/testthat/test-writer.R | 81 ggsql-0.5.2/ggsql/tools/build-hep-assets.mjs |only ggsql-0.5.2/ggsql/tools/config.R | 17 ggsql-0.5.2/ggsql/tools/update-hephaestus.sh |only ggsql-0.5.2/ggsql/tools/vendor.R | 50 47 files changed, 3120 insertions(+), 920 deletions(-)
Title: Automatic Generation of Exams in R
Description: Automatic generation of exams based on exercises in Markdown or LaTeX format,
possibly including R code for dynamic generation of exercise elements.
Exercise types include single-choice and multiple-choice questions, arithmetic problems,
string questions, and combinations thereof (cloze). Output formats include standalone
files (PDF, HTML, Docx, ODT, ...), Moodle XML, QTI 1.2, QTI 2.1, Blackboard, Canvas, OpenOlat, ILIAS, TestVision,
Particify, ARSnova, Kahoot!, Grasple, and TCExam. In addition to fully customizable PDF exams, a standardized PDF format
(NOPS) is provided that can be printed, scanned, and automatically evaluated.
Author: Achim Zeileis [aut, cre] ,
Bettina Gruen [aut] ,
Friedrich Leisch [aut] ,
Nikolaus Umlauf [aut] ,
Niels Smits [aut] ,
Dominik Ernst [ctb] ,
Patrik Keller [ctb],
Reto Stauffer [ctb] ,
Kenji Sato [ctb] ,
Florian Wickelmaier [ctb],
Sebastian Bachler [ct [...truncated...]
Maintainer: Achim Zeileis <Achim.Zeileis@R-project.org>
Diff between exams versions 2.4-4 dated 2026-07-31 and 2.4-5 dated 2026-10-08
DESCRIPTION | 12 +++++------- MD5 | 21 +++++++++++---------- NEWS.md | 17 +++++++++++++++++ R/exams2ilias.R | 2 ++ R/read_metainfo.R | 2 +- README.md |only inst/doc/exams.Rnw | 2 +- inst/doc/exams.pdf |binary inst/doc/exams2.pdf |binary man/exams2ilias.Rd | 18 +++++++++++++----- man/include_tikz.Rd | 2 +- vignettes/exams.Rnw | 2 +- 12 files changed, 52 insertions(+), 26 deletions(-)
More information about BoxDensityPlot at CRAN
Permanent link
Title: Estimate and Manipulate Age-Depth Models
Description: Estimate age-depth models from stratigraphic and sedimentological data,
and transform data
between the time and stratigraphic domain.
Author: Niklas Hohmann [aut] ,
Emilia Jarochowska [cre]
Maintainer: Emilia Jarochowska <e.jarochowska@uni-muenster.de>
Diff between admtools versions 0.6.0 dated 2025-05-20 and 0.7.0 dated 2026-10-08
DESCRIPTION | 21 ++++++++------ MD5 | 30 ++++++++++---------- NEWS.md | 6 ++++ R/strat_to_time.fossils.R | 4 +- README.md | 10 ++++-- build/partial.rdb |binary build/vignette.rds |binary inst/CITATION | 6 ++-- inst/doc/FossilSim_integration.html | 5 ++- inst/doc/adm_from_sedrate.html | 15 +++++----- inst/doc/adm_from_trace_cont.html | 15 +++++----- inst/doc/adm_plotting.html | 5 ++- inst/doc/admtools.html | 15 +++++----- inst/doc/admtools_doc.html | 1 inst/doc/correlation.html | 7 ++-- man/admtools-package.Rd | 53 +++++++++++++++++++----------------- 16 files changed, 109 insertions(+), 84 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2026-03-23 0.1.3
2026-03-05 0.1.2
Title: Estimate Permutation p-Values for Random Forest Importance
Metrics
Description: Estimate significance of importance metrics for a Random Forest
model by permuting the response variable. Produces null distribution of
importance metrics for each predictor variable and p-value of observed.
Provides summary and visualization functions for 'randomForest' results.
Author: Eric Archer [aut, cre]
Maintainer: Eric Archer <eric.ivan.archer@gmail.com>
Diff between rfPermute versions 2.5.5 dated 2025-06-10 and 2.5.6 dated 2026-10-08
DESCRIPTION | 25 ++++++------- MD5 | 30 ++++++++-------- NAMESPACE | 13 ++++--- R/confusionMatrix.R | 8 ++-- R/importance.R | 6 +-- R/plotImpPreds.R | 2 - R/plotInbag.R | 86 ++++++++++++++++++++++++++++++++++++----------- R/plotNull.R | 4 +- R/plotPredictedProbs.R | 2 - R/plotProximity.R | 10 ++--- R/plotTrace.R | 8 ++-- R/rfPermute.R | 3 + R/rfROC.R |only README.md | 11 +++++- man/plotInbag.Rd | 5 +- man/rfPermute-package.Rd | 5 ++ man/rfROC.Rd |only 17 files changed, 147 insertions(+), 71 deletions(-)
Title: JSON Graphics Device
Description: A graphics device that translates R plotting operations into JSON
and streams them over a local connection to an external display
application. The device acts as a pure recorder with no rendering
dependencies; all rendering occurs in that application (e.g. a 'VS Code'
extension or a web browser). Official display applications are available
from the project homepage.
Author: Grant McDermott [aut, cre],
Tatsuya Shima [aut],
Dave Gamble [cph] ,
cJSON contributors [cph]
Maintainer: Grant McDermott <contact@grantmcdermott.com>
Diff between jgd versions 0.2.0 dated 2026-09-27 and 0.2.1 dated 2026-10-08
DESCRIPTION | 7 +- MD5 | 7 +- NEWS.md | 9 ++ tests/testthat/helper-mock-server.R | 110 ++++++++++++++++++++++-------------- tests/testthat/test-mock-server.R |only 5 files changed, 86 insertions(+), 47 deletions(-)
Title: Data Only Package to 'healthyR'
Description: Provides data for functions typically used in the 'healthyR' package.
Author: Steven Sanderson [aut, cre, cph]
Maintainer: Steven Sanderson <spsanderson@gmail.com>
Diff between healthyR.data versions 1.2.0 dated 2025-01-12 and 1.2.1 dated 2026-10-08
DESCRIPTION | 12 MD5 | 53 +-- NEWS.md | 12 R/meta-get-cms-data.R | 9 README.md | 322 ++++++++++++++++++++- man/current_asc_data.Rd | 38 +- man/current_asc_oas_cahps_data.Rd | 38 +- man/current_comp_death_data.Rd | 38 +- man/current_hai_data.Rd | 38 +- man/current_hcahps_data.Rd | 38 +- man/current_hosp_data.Rd | 38 +- man/current_hvbp_data.Rd | 38 +- man/current_ipfqr_data.Rd | 38 +- man/current_maternal_data.Rd | 38 +- man/current_medicare_hospital_spending_data.Rd | 38 +- man/current_oqr_oas_cahps_data.Rd | 38 +- man/current_outpatient_imaging_efficiency_data.Rd | 38 +- man/current_payments_data.Rd | 38 +- man/current_pch_hai_hospital_data.Rd | 38 +- man/current_pch_hcahps_data.Rd | 38 +- man/current_pch_oncology_measures_hospital_data.Rd | 38 +- man/current_pch_outcomes_data.Rd | 38 +- man/current_timely_and_effective_care_data.Rd | 38 +- man/current_unplanned_hospital_visits_data.Rd | 40 +- man/current_va_data.Rd | 38 +- man/get_cms_meta_data.Rd | 7 man/get_provider_meta_data.Rd | 4 tests |only 28 files changed, 748 insertions(+), 433 deletions(-)
Title: Functions and Utilities for Jordan
Description: Provides core functions and utilities for packages and other code
developed by Jordan Mark Barbone.
Author: Jordan Mark Barbone [aut, cph, cre]
Maintainer: Jordan Mark Barbone <jmbarbone@gmail.com>
Diff between fuj versions 0.2.2 dated 2025-04-23 and 0.3.0 dated 2026-10-08
DESCRIPTION | 16 +- MD5 | 139 ++++++++++++-------- NAMESPACE | 92 +++++++++++++ NEWS.md | 88 ++++++++++++ R/arithmetic.R | 14 +- R/attributes.R | 6 R/colons.R | 50 +++---- R/condition.R | 204 ++++++++++++++++++++---------- R/conditions-fuj.R |only R/conditions.R |only R/data-frame.R | 88 +++++++----- R/delay.R |only R/encode.R |only R/extract.R | 14 +- R/flip.R | 7 - R/fs.R | 105 ++++++++++++++- R/fuj-package.R | 22 ++- R/hot.R |only R/if-null.R | 2 R/include.R | 51 ++++--- R/list.R | 10 + R/match-arg.R |only R/match.R | 34 ++--- R/muffle.R | 9 - R/names.R | 10 - R/namespace.R | 251 +++++++++++++++++++++++++++---------- R/negate.R |only R/os.R | 17 +- R/package.R |only R/paste.R | 4 R/progress.R |only R/struct.R | 13 + R/utils.R | 51 ++++++- R/vap.R |only R/verbose.R | 29 +--- R/yes-no.R | 54 +++---- README.md | 55 ++++++-- inst/WORDLIST | 5 man/alias_extract.Rd | 2 man/collapse.Rd | 4 man/conditions.Rd |only man/delay.Rd |only man/encode.Rd |only man/exattr.Rd | 2 man/fp.Rd | 59 +++++++- man/fuj-package.Rd | 5 man/hot.Rd |only man/if_null.Rd | 2 man/include.Rd | 38 ++--- man/list0.Rd | 5 man/match_arg.Rd |only man/match_ext.Rd | 18 +- man/muffle.Rd | 2 man/negate.Rd |only man/new_condition.Rd | 56 +++++--- man/op.fuj.Rd | 6 man/quick_df.Rd | 10 - man/require_namespace.Rd | 37 +++++ man/struct.Rd | 15 +- man/vap.Rd |only man/verbose.Rd | 8 - tests/spelling.R | 3 tests/testthat.R | 3 tests/testthat/_snaps/namespace.md |only tests/testthat/_snaps/vap.md |only tests/testthat/test-colons.R | 10 - tests/testthat/test-condition.R | 26 +++ tests/testthat/test-conditions.R |only tests/testthat/test-data-frame.R | 36 ++++- tests/testthat/test-delay.R |only tests/testthat/test-encode.R |only tests/testthat/test-fs.R | 64 ++++++--- tests/testthat/test-hot.R |only tests/testthat/test-if-null.R | 1 tests/testthat/test-include.R | 10 - tests/testthat/test-list.R | 8 + tests/testthat/test-match-arg.R |only tests/testthat/test-muffle.R | 4 tests/testthat/test-namespace.R | 79 +++++++++-- tests/testthat/test-negate.R |only tests/testthat/test-progress.R |only tests/testthat/test-vap.R |only tests/testthat/test-verbose.R | 32 +++- tests/testthat/test-yes-no.R | 82 ++++++------ 84 files changed, 1444 insertions(+), 623 deletions(-)
Title: A Toolbox for Manipulating and Assessing Colors and Palettes
Description: Carries out mapping between assorted color spaces including RGB, HSV, HLS,
CIEXYZ, CIELUV, HCL (polar CIELUV), CIELAB, and polar CIELAB.
Qualitative, sequential, and diverging color palettes based on HCL colors
are provided along with corresponding ggplot2 color scales.
Color palette choice is aided by an interactive app (with either a Tcl/Tk
or a shiny graphical user interface) and shiny apps with an HCL color picker and a
color vision deficiency emulator. Plotting functions for displaying
and assessing palettes include color swatches, visualizations of the
HCL space, and trajectories in HCL and/or RGB spectrum. Color manipulation
functions include: desaturation, lightening/darkening, mixing, and
simulation of color vision deficiencies (deutanomaly, protanomaly, tritanomaly).
Details can be found on the project web page at <https://colorspace.R-Forge.R-project.org/>
and in the accompanying scientific paper: Zeileis et al. (2020, Journal of Statistical
Software, <doi:10.18637/ [...truncated...]
Author: Ross Ihaka [aut],
Paul Murrell [aut] ,
Kurt Hornik [aut] ,
Jason C. Fisher [aut] ,
Reto Stauffer [aut] ,
Claus O. Wilke [aut] ,
Claire D. McWhite [aut] ,
Achim Zeileis [aut, cre]
Maintainer: Achim Zeileis <Achim.Zeileis@R-project.org>
Diff between colorspace versions 2.1-3 dated 2026-07-12 and 2.1-4 dated 2026-10-08
DESCRIPTION | 12 ++++++------ MD5 | 24 ++++++++++++------------ NEWS.md | 12 ++++++++++++ R/choose_palette.R | 2 +- inst/doc/colorspace.R | 6 +++--- inst/doc/colorspace.Rmd | 12 ++++++------ inst/doc/colorspace.html | 26 +++++++++++++------------- inst/doc/hcl-colors.Rnw | 2 +- inst/doc/hcl-colors.pdf |binary inst/hclwizard/html/R.html | 4 ++-- inst/hclwizard/html/RReg.html | 2 +- vignettes/colorspace.Rmd | 12 ++++++------ vignettes/hcl-colors.Rnw | 2 +- 13 files changed, 64 insertions(+), 52 deletions(-)
Title: Wrangle Large Simulation Studies
Description: An 'R6' class to set up, run, monitor, collate, and debug large simulation studies comprising many small independent replications and treatment configurations. Parallel processing, reproducibility, fault- and error-tolerance, and ability to resume an interrupted or timed-out simulation study are built in.
Author: Pavel N. Krivitsky [aut, cre]
Maintainer: Pavel N. Krivitsky <pavel@statnet.org>
Diff between piecemeal versions 0.2.0 dated 2026-03-11 and 0.3.0 dated 2026-10-08
piecemeal-0.2.0/piecemeal/inst/examples/post.R |only piecemeal-0.2.0/piecemeal/inst/examples/run.R |only piecemeal-0.2.0/piecemeal/inst/examples/setup.R |only piecemeal-0.2.0/piecemeal/tests/testthat/test-piecemeal.R |only piecemeal-0.3.0/piecemeal/DESCRIPTION | 10 piecemeal-0.3.0/piecemeal/MD5 | 50 piecemeal-0.3.0/piecemeal/NAMESPACE | 28 piecemeal-0.3.0/piecemeal/NEWS | 67 piecemeal-0.3.0/piecemeal/NEWS.md | 61 piecemeal-0.3.0/piecemeal/R/Piecemeal.R | 456 +++-- piecemeal-0.3.0/piecemeal/R/consolidate.R | 19 piecemeal-0.3.0/piecemeal/build/stage23.rdb |binary piecemeal-0.3.0/piecemeal/build/vignette.rds |binary piecemeal-0.3.0/piecemeal/inst/doc/piecemeal.R | 43 piecemeal-0.3.0/piecemeal/inst/doc/piecemeal.Rmd | 100 - piecemeal-0.3.0/piecemeal/inst/doc/piecemeal.html | 882 +++++----- piecemeal-0.3.0/piecemeal/inst/examples/2file |only piecemeal-0.3.0/piecemeal/inst/examples/3file |only piecemeal-0.3.0/piecemeal/inst/examples/README.md | 60 piecemeal-0.3.0/piecemeal/man/Piecemeal.Rd | 810 +++++---- piecemeal-0.3.0/piecemeal/man/piecemeal-package.Rd | 2 piecemeal-0.3.0/piecemeal/tests/testthat/test-autorun.R |only piecemeal-0.3.0/piecemeal/tests/testthat/test-cli.R |only piecemeal-0.3.0/piecemeal/tests/testthat/test-cluster.R |only piecemeal-0.3.0/piecemeal/tests/testthat/test-concurrent-status.R |only piecemeal-0.3.0/piecemeal/tests/testthat/test-consolidation.R | 42 piecemeal-0.3.0/piecemeal/tests/testthat/test-test-debug.R |only piecemeal-0.3.0/piecemeal/tests/testthat/test-vignette.R | 129 + piecemeal-0.3.0/piecemeal/tests/testthat/test-worker-results.R | 55 piecemeal-0.3.0/piecemeal/vignettes/piecemeal.Rmd | 100 - 30 files changed, 1887 insertions(+), 1027 deletions(-)
Title: DDI with R
Description: Useful functions for various DDI (Data Documentation Initiative)
related inputs and outputs. Converts data files to and from DDI, SPSS,
Stata, SAS, R and Excel, including user declared missing values.
Author: Adrian Dusa [aut, cre, cph]
Maintainer: Adrian Dusa <dusa.adrian@unibuc.ro>
Diff between DDIwR versions 0.21 dated 2026-09-12 and 0.22 dated 2026-10-08
DESCRIPTION | 6 MD5 | 46 +- NAMESPACE | 5 R/DDIwR_package.R | 4 R/exportCodebook.R | 47 +- R/internals.R | 91 +++- R/metadataDialog.R |only R/metadataProjection.R |only R/metadataSession.R |only R/metadataSnapshot.R |only R/metadataSweepImport.R |only R/parallel.R |only R/readstat_internal.R | 69 ++- inst/ChangeLog | 15 man/DDIwRParallel.Rd |only man/DDIwR_internal.Rd | 7 man/DDIwR_package.Rd | 4 man/exportCodebook.Rd | 19 man/metadataSweepCapture.Rd |only man/metadataSweepImport.Rd |only src/Makevars.in | 12 src/Makevars.win | 12 src/init.c | 21 src/metadata_snapshot.c |only src/metadata_text.c |only src/metadata_text.h |only src/sc_parallel_read.c | 8 src/variable_analysis.c |only src/variable_analysis.h |only src/variable_threads.c |only src/variable_threads.h |only src/xmlvars.c | 996 ++++++++++++-------------------------------- 32 files changed, 588 insertions(+), 774 deletions(-)
Title: Tools for Easier Analysis of Meteorological Fields
Description: Many useful functions and extensions for dealing with
meteorological data in the tidy data framework. Extends 'ggplot2' for
better plotting of scalar and vector fields and provides commonly used
analysis methods in the atmospheric sciences.
Author: Elio Campitelli [cre, aut]
Maintainer: Elio Campitelli <eliocampitelli@gmail.com>
Diff between metR versions 0.18.3 dated 2025-12-09 and 0.19.0 dated 2026-10-08
DESCRIPTION | 10 MD5 | 247 +++---- NAMESPACE | 41 - NEWS.md | 513 +++++++-------- R/ConvertLongitude.R | 81 +- R/Derivate.R | 497 ++++++++------ R/EOF.R | 349 +++++----- R/EOF_methods.R | 202 +++-- R/FitLm.R | 229 +++--- R/FitWave.R | 149 ++-- R/GeostrophicWind.R | 54 - R/GetSMNData.R | 12 R/GetTopography.R | 209 ++++-- R/IdealGas.R | 154 ++-- R/Impute2D.R | 141 ++-- R/ImputeEOF.R | 324 +++++---- R/Interpolate.R | 257 ++++--- R/MakeBreaks.R | 149 +++- R/MaskLand.R | 67 + R/ReadNetCDF.R | 823 +++++++++++++----------- R/RepeatCircular.R | 84 +- R/Smooth2D.R | 95 +- R/Tajectory.R | 273 ++++--- R/WaveFlux.R | 280 +++++--- R/WriteNetCDF.R | 145 ++-- R/arrowGrob.R | 136 ++- R/as-discretised-scale.R | 26 R/coriolis.R | 10 R/cross.R | 23 R/geom_arrow.R | 597 ++++++++++------- R/geom_contour2.r | 290 ++++---- R/geom_contour_fill.R | 78 +- R/geom_contour_tanaka.R | 416 +++++++----- R/geom_label_contour.R | 279 ++++---- R/geom_relief.R | 290 ++++---- R/geom_shadow.R | 329 +++++---- R/geom_streamline.R | 956 ++++++++++++++++------------ R/geom_text_contour.R | 278 ++++---- R/guide_colorstrip.R | 931 ++++++++++++++++----------- R/helpfunctions.R | 527 ++++++++------- R/label-placement.R | 352 +++++----- R/label-scales.R | 43 - R/reverselog_trans.R | 16 R/rk4.R | 50 - R/scale-unbinned.R | 403 ++++++----- R/scale_divergent.R | 56 + R/scale_longitude.R | 147 ++-- R/scale_vector.R | 41 - R/season.R | 132 ++- R/small_funs.R | 76 +- R/standard_atmosphere.R | 442 +++++++----- R/stat_contour2.r | 741 ++++++++++++--------- R/stat_contour_fill.R | 616 +++++++++--------- R/stat_na.R | 96 +- R/stat_subset.R | 48 - R/textContourGrob.R | 600 +++++++++-------- R/theme_fields.R | 49 - R/zzz.R | 59 + README.md | 7 build/partial.rdb |binary build/vignette.rds |binary inst/doc/Visualization-tools.html | 31 inst/doc/Working-with-data.html | 36 - man/Anomaly.Rd | 8 man/Derivate.Rd | 8 man/EOF.Rd | 8 man/FitLm.Rd | 24 man/GeostrophicWind.Rd | 8 man/Impute2D.Rd | 2 man/ImputeEOF.Rd | 5 man/JumpBy.Rd | 8 man/Mag.Rd | 14 man/MakeBreaks.Rd | 57 + man/Percentile.Rd | 8 man/ReadNetCDF.Rd | 2 man/WaveFlux.Rd | 45 - man/WrapCircular.Rd | 24 man/discretised_scale.Rd | 2 man/geom_arrow.Rd | 26 man/geom_contour2.Rd | 42 - man/geom_contour_fill.Rd | 26 man/geom_contour_tanaka.Rd | 2 man/geom_relief.Rd | 28 man/geom_streamline.Rd | 31 man/geom_text_contour.Rd | 30 man/guide_colourstrip.Rd | 24 man/logic.Rd | 10 man/map_labels.Rd | 26 man/metR.Rd | 5 man/reverselog_trans.Rd | 24 man/scale_divergent.Rd | 26 man/scale_longitude.Rd | 26 man/scale_stroke.colour_continuous.Rd | 2 man/standard_atmosphere.Rd | 2 man/stat_na.Rd | 26 man/stat_subset.Rd | 26 man/thermodynamics.Rd | 10 man/waves.Rd | 10 tests/testthat.R | 4 tests/testthat/era5_timestamp.nc |only tests/testthat/test-GetTopography.R | 22 tests/testthat/test-ReadNetCDF.R | 157 ++-- tests/testthat/test-Smooth2D.R | 24 tests/testthat/test-breaks.R | 35 - tests/testthat/test-derivate.R | 228 +++--- tests/testthat/test-eof.R | 151 ++-- tests/testthat/test-fitlm.R | 112 +-- tests/testthat/test-imputeeof.R | 57 + tests/testthat/test-interpolate.R | 49 - tests/testthat/test-season.R | 37 - tests/testthat/test-smallfun.R | 55 - tests/testthat/test-thermodynamics.R | 86 +- tests/testthat/test-trajectory.R | 46 - tests/testthat/test-vis-arrow.R | 56 - tests/testthat/test-vis-contour2.R | 121 +-- tests/testthat/test-vis-contour_fill.R | 88 +- tests/testthat/test-vis-discretised-scale.R | 53 - tests/testthat/test-vis-geom-relief.R | 78 +- tests/testthat/test-vis-guide_colorstrip.R | 41 - tests/testthat/test-vis-streamline.R | 109 ++- tests/testthat/test-vis-text-contour.R | 157 ++-- tests/testthat/test-waveflux.R | 9 tests/testthat/test-waves.R | 27 tests/testthat/test_text_contour.R | 1 tests/testthat/tests.R | 33 125 files changed, 9654 insertions(+), 7399 deletions(-)