Title: Access and Analyze the Data from the Red Book of Endemic Plants
of Peru
Description: Access and analysis of data from `The Red Book of Endemic Plants of Peru` León, B., Roque, J., Ulloa, C., Jorgensen, P.M., Pitman, N., Cano, A. (2006)<doi:10.15381/rpb.v13i2.1782> providing taxonomic, geographic, and conservation information about Peru's endemic plant species. The package offers functions to check species inclusion, obtain updated taxonomic details, and explore the dataset.
Author: Paul E. Santos Andrade [aut, cre]
,
Lucely L. Vilca Bustamante [aut]
Maintainer: Paul E. Santos Andrade <paulefrens@gmail.com>
Diff between redbookperu versions 0.0.1 dated 2023-08-21 and 0.0.2 dated 2023-08-27
DESCRIPTION | 6 ++-- MD5 | 10 +++--- README.md | 53 +++++++++++++++++++++--------------- data/redbook_taxonomy.rda |binary tests/testthat/test_check_redbook.R | 13 +++++--- tests/testthat/test_data_check.R | 2 - 6 files changed, 48 insertions(+), 36 deletions(-)
Title: Power and Sample Size Calculations for Clinical Trials
Description: Efficient simulation-based power and sample size calculations are supported for a
broad class of late-stage clinical trials. The following modules are included in
the package:
Adaptive designs with data-driven sample size or event count re-estimation,
Adaptive designs with data-driven treatment selection,
Adaptive designs with data-driven population selection,
Optimal selection of a futility stopping rule,
Event prediction in event-driven trials,
Adaptive trials with response-adaptive randomization (experimental module),
Traditional trials with multiple objectives (experimental module).
Traditional trials with cluster-randomized designs (experimental module).
Author: Alex Dmitrienko [aut, cre]
Maintainer: Alex Dmitrienko <admitrienko@mediana.us>
Diff between MedianaDesigner versions 0.12 dated 2023-01-12 and 0.13 dated 2023-08-27
CHANGELOG | 3 +++ DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ data/EventPredData.RData |binary man/MedianaDesigner-package.Rd | 4 ++-- src/Makevars | 1 - src/Makevars.win | 1 - 7 files changed, 15 insertions(+), 14 deletions(-)
More information about MedianaDesigner at CRAN
Permanent link
Title: Tools and GUI for Analyzing Time Series Data of Just Finance and
Econometrics
Description: Offers a menu-driven GUI to support financial and economic time series modelling and enhanced procedures for computing the investment performance indices of Bacon (2004) <DOI:10.1002/9781119206309>.
Author: Ho Tsung-wu
Maintainer: Ho Tsung-wu <tsungwu@ntnu.edu.tw>
Diff between JFE versions 2.5.4 dated 2023-05-18 and 2.5.5 dated 2023-08-27
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- R/PerformanceIndex.R | 2 +- 3 files changed, 7 insertions(+), 7 deletions(-)
Title: Interact with 'Condor' from R via SSH
Description: Interact with 'Condor' from R via SSH connection. Files are first
uploaded from user machine to submitter machine, and the job is then submitted
from the submitter machine to 'Condor'. Functions are provided to submit,
list, and download 'Condor' jobs from R. 'Condor' is an open source
high-throughput computing software framework for distributed parallelization
of computationally intensive tasks.
Author: Arni Magnusson [aut, cre],
Nan Yao [aut],
Jemery Day [ctb],
Thomas Teears [ctb]
Maintainer: Arni Magnusson <thisisarni@gmail.com>
Diff between condor versions 2.0.0 dated 2023-06-21 and 2.1.0 dated 2023-08-27
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ NAMESPACE | 2 ++ NEWS.md | 14 +++++++++++++- R/condor_dir.R | 9 +++++---- R/condor_q.R | 41 ++++++++++++++++++++++++++++++++++++----- man/condor_q.Rd | 21 +++++++++++++++++++-- 7 files changed, 85 insertions(+), 22 deletions(-)
Title: Spatial and Spatio-Temporal Models using 'INLA'
Description: Prepare objects to implement models over spatial and
spacetime domains with the 'INLA' package (<https://www.r-inla.org>).
These objects contain data to for the 'cgeneric' interface in
'INLA', enabling fast parallel computations.
We implemented the spatial barrier model, see Bakka et. al. (2019)
<doi:10.1016/j.spasta.2019.01.002>, and some of the spatio-temporal
models in Lindgren et. al. (2023) <arXiv:2006.04917>.
Details are provided in the available vignettes and from the URL bellow.
Author: Elias Teixeira Krainski [cre, aut, cph]
,
Finn Lindgren [aut] ,
Haavard Rue [aut]
Maintainer: Elias Teixeira Krainski <eliaskrainski@gmail.com>
Diff between INLAspacetime versions 0.1.6 dated 2023-04-19 and 0.1.7 dated 2023-08-27
DESCRIPTION | 12 ++-- MD5 | 51 +++++++++++++------- NAMESPACE | 2 R/INLAspacetime.R | 1 R/mesh.dual.R | 10 +-- R/stModel.matrices.R | 103 ++++++++++++++++++++++++++++++++++++++--- R/stats.inla.R | 14 +++-- README.md | 38 ++++++++------- build/partial.rdb |binary build/vignette.rds |binary inst/doc/website_examples.R | 5 - inst/doc/website_examples.Rmd | 5 - inst/doc/website_examples.html | 4 + inst/examples |only man/stModel.matrices.Rd | 6 +- man/stModel.precision.Rd |only man/stats.inla.Rd | 1 src/cgeneric_sstspde.c | 4 - vignettes/web |only vignettes/website_examples.Rmd | 5 - 20 files changed, 193 insertions(+), 68 deletions(-)
Title: Retrieve and Analyze Clinical Trials in Public Registers
Description: A system for querying, retrieving and analyzing
protocol- and results-related information on clinical trials from
four public registers, the 'European Union Clinical Trials Register'
('EUCTR', <https://www.clinicaltrialsregister.eu/>),
'ClinicalTrials.gov' ('CTGOV', using the classic interface at
<https://classic.clinicaltrials.gov/>), the
'ISRCTN' (<http://www.isrctn.com/>) and the
'European Union Clinical Trials Information System'
('CTIS', <https://euclinicaltrials.eu/>).
Trial information is downloaded, converted and stored in a database
('PostgreSQL', 'SQLite', 'DuckDB' or 'MongoDB'; via package 'nodbi').
All documents in registers associated with trials can also be downloaded.
Other functions identify deduplicated records,
easily find and extract variables (fields) of interest even
from complex nested data as used by the registers,
merge variables and update queries.
The package can be used for meta-analysis and trend-analysis of
the design and conduct as [...truncated...]
Author: Ralf Herold [aut, cre]
Maintainer: Ralf Herold <ralf.herold@mailbox.org>
Diff between ctrdata versions 1.14.0 dated 2023-07-16 and 1.15.0 dated 2023-08-27
ctrdata-1.14.0/ctrdata/man/ctrdata-package.Rd |only ctrdata-1.15.0/ctrdata/DESCRIPTION | 8 ctrdata-1.15.0/ctrdata/MD5 | 63 ctrdata-1.15.0/ctrdata/NAMESPACE | 1 ctrdata-1.15.0/ctrdata/NEWS.md | 69 - ctrdata-1.15.0/ctrdata/R/ctrdata-package.R | 26 ctrdata-1.15.0/ctrdata/R/ctrdata-registers.R | 56 ctrdata-1.15.0/ctrdata/R/main.R | 682 ++++++++-- ctrdata-1.15.0/ctrdata/R/utils.R | 456 ++++-- ctrdata-1.15.0/ctrdata/README.md | 394 +++-- ctrdata-1.15.0/ctrdata/inst/doc/ctrdata_install.pdf |binary ctrdata-1.15.0/ctrdata/inst/doc/ctrdata_retrieve.pdf |binary ctrdata-1.15.0/ctrdata/inst/doc/ctrdata_summarise.pdf |binary ctrdata-1.15.0/ctrdata/inst/tinytest/ctrdata_ctgov_2023api.R |only ctrdata-1.15.0/ctrdata/inst/tinytest/ctrdata_ctis.R | 5 ctrdata-1.15.0/ctrdata/inst/tinytest/ctrdata_euctr.R | 4 ctrdata-1.15.0/ctrdata/inst/tinytest/ctrdata_isrctn.R | 12 ctrdata-1.15.0/ctrdata/inst/tinytest/more_test_ctrdata_param_checks.R | 88 + ctrdata-1.15.0/ctrdata/inst/tinytest/sample_error_trials_euctr.txt |only ctrdata-1.15.0/ctrdata/inst/tinytest/setup_ctrdata.R | 4 ctrdata-1.15.0/ctrdata/inst/tinytest/test_ctrdata_mongo_local_ctgov2.R |only ctrdata-1.15.0/ctrdata/inst/tinytest/test_ctrdata_other_functions.R | 74 - ctrdata-1.15.0/ctrdata/inst/tinytest/test_ctrdata_sqlite_ctgov2.R |only ctrdata-1.15.0/ctrdata/inst/tinytest/test_euctr_error_sample.R |only ctrdata-1.15.0/ctrdata/man/ctrDb.Rd | 2 ctrdata-1.15.0/ctrdata/man/ctrGetQueryUrl.Rd | 8 ctrdata-1.15.0/ctrdata/man/ctrLoadQueryIntoDb.Rd | 8 ctrdata-1.15.0/ctrdata/man/ctrOpenSearchPagesInBrowser.Rd | 26 ctrdata-1.15.0/ctrdata/man/ctrdata-registers.Rd | 58 ctrdata-1.15.0/ctrdata/man/ctrdata.Rd |only ctrdata-1.15.0/ctrdata/man/dbFindFields.Rd | 2 ctrdata-1.15.0/ctrdata/man/dbFindIdsUniqueTrials.Rd | 6 ctrdata-1.15.0/ctrdata/man/dbGetFieldsIntoDf.Rd | 2 ctrdata-1.15.0/ctrdata/man/dbQueryHistory.Rd | 2 ctrdata-1.15.0/ctrdata/man/figures/README-ctrdata_across_registers.png |binary ctrdata-1.15.0/ctrdata/vignettes/ctrdata_retrieve.Rmd | 122 + 36 files changed, 1595 insertions(+), 583 deletions(-)
Title: Construct, Evaluate and Plot Value and Utility Functions
Description: Construct and plot objective hierarchies and associated value and utility functions.
Evaluate the values and utilities and visualize the results as colored objective hierarchies or tables.
Visualize uncertainty by plotting median and quantile intervals within the nodes of objective hierarchies.
Get numerical results of the evaluations in standard R data types for further processing.
Author: Peter Reichert <peter.reichert@emeriti.eawag.ch>
with contributions by Nele Schuwirth <nele.schuwirth@eawag.ch>
Maintainer: Peter Reichert <peter.reichert@emeriti.eawag.ch>
Diff between utility versions 1.4.5 dated 2020-03-09 and 1.4.6 dated 2023-08-27
DESCRIPTION | 12 MD5 | 220 ++--- R/utility.aux.r | 1 R/utility.conversion.intpol.r | 4 R/utility.conversion.parfun.r | 4 R/utility.plot.r | 24 inst/CITATION | 8 inst/NEWS | 9 man/evaluate.Rd | 2 man/evaluate.utility.aggregation.Rd | 2 man/evaluate.utility.conversion.intpol.Rd | 2 man/evaluate.utility.conversion.parfun.Rd | 2 man/evaluate.utility.endnode.classcounts.Rd | 2 man/evaluate.utility.endnode.cond.Rd | 2 man/evaluate.utility.endnode.discrete.Rd | 2 man/evaluate.utility.endnode.firstavail.Rd | 2 man/evaluate.utility.endnode.intpol1d.Rd | 2 man/evaluate.utility.endnode.intpol2d.Rd | 2 man/evaluate.utility.endnode.parfun1d.Rd | 2 man/figures/aggregationadd.pdf |binary man/figures/aggregationaddmin.pdf |binary man/figures/aggregationaddpower.pdf |binary man/figures/aggregationaddsplitpower.pdf | 1044 ++++++++++++++++++++++----- man/figures/aggregationbonusmalus.pdf |binary man/figures/aggregationgeo.pdf | 955 ++++++++++++++++-------- man/figures/aggregationharmo.pdf | 562 ++++++++------ man/figures/aggregationmax.pdf |binary man/figures/aggregationmin.pdf |binary man/figures/aggregationmix.pdf | 529 +++++++++---- man/figures/aggregationmult.pdf |binary man/figures/aggregationrevaddpower.pdf | 328 +++++--- man/figures/aggregationrevaddsplitpower.pdf |binary man/figures/aggregationrevgeo.pdf | 446 ++--------- man/figures/aggregationrevharmo.pdf | 455 +++-------- man/plot.utility.aggregation.Rd | 2 man/plot.utility.conversion.intpol.Rd | 2 man/plot.utility.conversion.parfun.Rd | 2 man/plot.utility.endnode.classcounts.Rd | 2 man/plot.utility.endnode.cond.Rd | 2 man/plot.utility.endnode.discrete.Rd | 2 man/plot.utility.endnode.firstavail.Rd | 2 man/plot.utility.endnode.intpol1d.Rd | 2 man/plot.utility.endnode.intpol2d.Rd | 2 man/plot.utility.endnode.parfun1d.Rd | 2 man/print.utility.aggregation.Rd | 2 man/print.utility.conversion.intpol.Rd | 2 man/print.utility.conversion.parfun.Rd | 2 man/print.utility.endnode.classcounts.Rd | 2 man/print.utility.endnode.cond.Rd | 2 man/print.utility.endnode.discrete.Rd | 2 man/print.utility.endnode.firstavail.Rd | 2 man/print.utility.endnode.intpol1d.Rd | 2 man/print.utility.endnode.intpol2d.Rd | 2 man/print.utility.endnode.parfun1d.Rd | 2 man/summary.utility.aggregation.Rd | 2 man/summary.utility.conversion.intpol.Rd | 2 man/summary.utility.conversion.parfun.Rd | 2 man/summary.utility.endnode.classcounts.Rd | 2 man/summary.utility.endnode.cond.Rd | 2 man/summary.utility.endnode.discrete.Rd | 2 man/summary.utility.endnode.firstavail.Rd | 2 man/summary.utility.endnode.intpol1d.Rd | 2 man/summary.utility.endnode.intpol2d.Rd | 2 man/summary.utility.endnode.parfun1d.Rd | 2 man/updatepar.Rd | 2 man/updatepar.utility.aggregation.Rd | 2 man/updatepar.utility.conversion.intpol.Rd | 2 man/updatepar.utility.conversion.parfun.Rd | 2 man/updatepar.utility.endnode.classcounts.Rd | 2 man/updatepar.utility.endnode.cond.Rd | 2 man/updatepar.utility.endnode.discrete.Rd | 2 man/updatepar.utility.endnode.firstavail.Rd | 2 man/updatepar.utility.endnode.intpol1d.Rd | 2 man/updatepar.utility.endnode.intpol2d.Rd | 2 man/updatepar.utility.endnode.parfun1d.Rd | 2 man/utility-package.Rd | 8 man/utility.aggregate.add.Rd | 2 man/utility.aggregate.addmin.Rd | 2 man/utility.aggregate.addpower.Rd | 2 man/utility.aggregate.addsplitpower.Rd | 2 man/utility.aggregate.bonusmalus.Rd | 2 man/utility.aggregate.cobbdouglas.Rd | 2 man/utility.aggregate.geo.Rd | 2 man/utility.aggregate.geooff.Rd | 2 man/utility.aggregate.harmo.Rd | 2 man/utility.aggregate.harmooff.Rd | 2 man/utility.aggregate.max.Rd | 2 man/utility.aggregate.min.Rd | 2 man/utility.aggregate.mix.Rd | 2 man/utility.aggregate.mult.Rd | 2 man/utility.aggregate.revaddpower.Rd | 2 man/utility.aggregate.revaddsplitpower.Rd | 2 man/utility.aggregate.revgeo.Rd | 2 man/utility.aggregate.revgeooff.Rd | 2 man/utility.aggregate.revharmo.Rd | 2 man/utility.aggregate.revharmooff.Rd | 2 man/utility.aggregation.create.Rd | 2 man/utility.calc.colors.Rd | 2 man/utility.conversion.intpol.create.Rd | 2 man/utility.conversion.parfun.create.Rd | 2 man/utility.endnode.classcounts.create.Rd | 2 man/utility.endnode.cond.create.Rd | 2 man/utility.endnode.discrete.create.Rd | 2 man/utility.endnode.firstavail.create.Rd | 2 man/utility.endnode.intpol1d.create.Rd | 2 man/utility.endnode.intpol2d.create.Rd | 2 man/utility.endnode.parfun1d.create.Rd | 2 man/utility.fun.exp.Rd | 2 man/utility.get.attrib.names.Rd | 2 man/utility.get.colors.Rd | 2 man/utility.structure.Rd | 2 111 files changed, 2854 insertions(+), 1929 deletions(-)
Title: Sequential Rank Agreement
Description: Tools for analysing the agreement of two or more rankings of the same items. Examples are importance rankings of predictor variables and risk predictions of subjects. Benchmarks for agreement are computed based on random permutation and bootstrap. See Ekstrøm CT, Gerds TA, Jensen, AK (2018). "Sequential rank agreement methods for comparison of ranked lists." _Biostatistics_, *20*(4), 582-598 <doi:10.1093/biostatistics/kxy017> for more information.
Author: Claus Thorn Ekstroem [aut, cre],
Thomas Alexander Gerds [aut]
Maintainer: Claus Thorn Ekstroem <ekstrom@sund.ku.dk>
Diff between SuperRanker versions 1.2.0 dated 2021-01-29 and 1.2.1 dated 2023-08-27
DESCRIPTION | 19 +++++++++++-------- MD5 | 8 ++++---- R/SuperRanker-package.R | 1 + man/SuperRanker.Rd | 1 + src/RcppExports.cpp | 5 +++++ 5 files changed, 22 insertions(+), 12 deletions(-)
Title: Convert Strings into any Case
Description: A consistent, flexible and easy to use tool to parse and convert strings into cases like snake or camel among others.
Author: Malte Grosser [aut, cre]
Maintainer: Malte Grosser <malte.grosser@gmail.com>
Diff between snakecase versions 0.11.0 dated 2019-05-25 and 0.11.1 dated 2023-08-27
DESCRIPTION | 8 MD5 | 16 - NEWS.md | 4 build/vignette.rds |binary inst/doc/caseconverters.R | 10 inst/doc/caseconverters.html | 211 +++++++++++-------- inst/doc/introducing-the-snakecase-package.R | 16 - inst/doc/introducing-the-snakecase-package.html | 266 +++++++++++++++--------- tests/testthat/test-to_any_case.R | 2 9 files changed, 326 insertions(+), 207 deletions(-)
Title: Stability-enHanced Approaches using Resampling Procedures
Description: In stability selection (N Meinshausen, P Bühlmann (2010) <doi:10.1111/j.1467-9868.2010.00740.x>) and consensus clustering (S Monti et al (2003) <doi:10.1023/A:1023949509487>), resampling techniques are used to enhance the reliability of the results. In this package, hyper-parameters are calibrated by maximising model stability, which is measured under the null hypothesis that all selection (or co-membership) probabilities are identical (B Bodinier et al (2021) <arXiv:2106.02521>). Functions are readily implemented for the use of LASSO regression, sparse PCA, sparse (group) PLS or graphical LASSO in stability selection, and hierarchical clustering, partitioning around medoids, K means or Gaussian mixture models in consensus clustering.
Author: Barbara Bodinier [aut, cre]
Maintainer: Barbara Bodinier <barbara.bodinier@gmail.com>
Diff between sharp versions 1.4.2 dated 2023-06-09 and 1.4.3 dated 2023-08-27
sharp-1.4.2/sharp/R/clustering_models.R |only sharp-1.4.3/sharp/DESCRIPTION | 11 ++++--- sharp-1.4.3/sharp/MD5 | 28 ++++++++++---------- sharp-1.4.3/sharp/NEWS.md | 7 ++++- sharp-1.4.3/sharp/R/clustering_algorithms.R |only sharp-1.4.3/sharp/R/sharp-package.R | 2 - sharp-1.4.3/sharp/R/stability_score.R | 8 ++--- sharp-1.4.3/sharp/build/partial.rdb |binary sharp-1.4.3/sharp/inst/doc/overview.pdf |binary sharp-1.4.3/sharp/man/DBSCANClustering.Rd | 2 - sharp-1.4.3/sharp/man/GMMClustering.Rd | 2 - sharp-1.4.3/sharp/man/HierarchicalClustering.Rd | 2 - sharp-1.4.3/sharp/man/KMeansClustering.Rd | 26 +++++++++++++++--- sharp-1.4.3/sharp/man/PAMClustering.Rd | 2 - sharp-1.4.3/sharp/man/SparseKMeansClustering.Rd |only sharp-1.4.3/sharp/man/UnweightedKMeansClustering.Rd |only sharp-1.4.3/sharp/man/sharp-package.Rd | 2 - 17 files changed, 58 insertions(+), 34 deletions(-)
Title: PCA on the Torus via Density Ridges
Description: Implementation of a Principal Component Analysis (PCA) in the
torus via density ridge estimation. The main function, ridge_pca(), obtains
the relevant density ridge for bivariate sine von Mises and bivariate
wrapped Cauchy distribution models and provides the associated scores and
variance decomposition. Auxiliary functions for evaluating, fitting, and
sampling these models are also provided. The package provides replicability
to García-Portugués and Prieto-Tirado (2023)
<doi:10.1007/s11222-023-10273-9>.
Author: Eduardo Garcia-Portugues [aut, cre]
,
Arturo Prieto-Tirado [aut]
Maintainer: Eduardo Garcia-Portugues <edgarcia@est-econ.uc3m.es>
Diff between ridgetorus versions 1.0.1 dated 2023-01-10 and 1.0.2 dated 2023-08-27
DESCRIPTION | 13 ++++---- MD5 | 30 +++++++++---------- NEWS.md | 6 +++ R/data.R | 5 +-- R/ridgetorus-package.R | 7 ++-- inst/CITATION | 25 ++++++++++++++- inst/doc/ridgetorus.Rmd | 2 - inst/doc/ridgetorus.html | 72 +++++++++++++++++++++++----------------------- man/ridgetorus-package.Rd | 7 ++-- man/santabarbara.Rd | 5 +-- src/Makevars | 4 -- src/Makevars.win | 4 -- src/grad-hess.cpp | 1 src/implicit-eq.cpp | 1 vignettes/ridgetorus.Rmd | 2 - vignettes/ridgetorus.bib | 13 +++++--- 16 files changed, 110 insertions(+), 87 deletions(-)
Title: Analysis of Archaeological Mortality Data
Description: A collection of functions for the analysis of archaeological mortality
data (on the topic see e.g. Chamberlain 2006
<https://books.google.de/books?id=nG5FoO_becAC&lpg=PA27&ots=LG0b_xrx6O&dq=life%20table%20archaeology&pg=PA27#v=onepage&q&f=false>).
It takes demographic data in different formats and displays the result in a standard life table
as well as plots the relevant indices (percentage of deaths, survivorship, probability of death, life expectancy, percentage of population).
Author: Nils Mueller-Scheessel [aut, cre, cph],
Martin Hinz [aut],
Clemens Schmid [aut],
Christoph Rinne [aut],
Daniel Knitter [aut],
Wolfgang Hamer [aut],
Dirk Seidensticker [aut],
Franziska Faupel [aut],
Carolin Tietze [aut],
Nicole Grunert [aut]
Maintainer: Nils Mueller-Scheessel <nils.mueller-scheessel@ufg.uni-kiel.de>
Diff between mortAAR versions 1.1.4 dated 2023-07-17 and 1.1.5 dated 2023-08-27
DESCRIPTION | 10 +++--- MD5 | 18 +++++------ NEWS.md | 4 ++ R/input_functions.R | 44 ++++++++++++++++++--------- R/plot_functions.R | 4 +- build/partial.rdb |binary inst/doc/mortAAR_vignette-1.html | 4 +- inst/doc/mortAAR_vignette_extended.html | 6 +-- inst/doc/mortAAR_vignette_lt_correction.html | 6 +-- man/prep.life.table.Rd | 20 +++++++----- 10 files changed, 71 insertions(+), 45 deletions(-)
Title: Generalized Inverse Normal Distribution Density and Generation
Description: Density function and generation of random variables from the Generalized Inverse Normal (GIN) distribution from Robert (1991) <doi:10.1016/0167-7152(91)90174-P>. Also provides density functions and generation from the GIN distribution truncated to positive or negative reals. Theoretical guarantees supporting the sampling algorithms and an application to Bayesian estimation of network formation models can be found in the working paper Ding, Estrada and Montoya-Blandón (2023) <https://www.smontoyablandon.com/publication/networks/network_externalities.pdf>.
Author: Santiago Montoya-Blandon [cre, aut]
,
Cheng Ding [aut],
Juan Estrada [aut] ,
Zhilang Xia [aut],
Shanjie Zhang [ctb],
Jianming Jin [ctb]
Maintainer: Santiago Montoya-Blandon <Santiago.Montoya-Blandon@glasgow.ac.uk>
Diff between ginormal versions 0.0.1 dated 2023-08-22 and 0.0.2 dated 2023-08-27
DESCRIPTION | 17 ++++++----------- MD5 | 6 +++--- R/F0gin.R | 8 ++++---- README.md | 59 ++++++++++++++++++++++++++++++++++------------------------- 4 files changed, 47 insertions(+), 43 deletions(-)
Title: Constrained Regression for Survey Data
Description: Domain mean estimation with monotonicity or block monotone constraints. See Xu X, Meyer MC and Opsomer JD (2021)<doi:10.1016/j.jspi.2021.02.004> for more details.
Author: Xiyue Liao
Maintainer: Xiyue Liao <xliao@sdsu.edu>
Diff between csurvey versions 1.6 dated 2023-08-07 and 1.7 dated 2023-08-27
ChangeLog | 9 ++++++++- DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- data/nhdat.rda |binary man/nhdat.Rd | 3 +-- 5 files changed, 17 insertions(+), 11 deletions(-)
Title: Randomization-Based Inference
Description: Randomization-Based Inference for customized experiments.
Computes Fisher-Exact P-Values alongside null randomization
distributions. Retrieves counternull sets and generates counternull
distributions. Computes Fisher Intervals and Fisher-Adjusted P-Values.
Package includes visualization of randomization distributions and Fisher
Intervals. Users can input custom test statistics and their own methods for
randomization.
Rosenthal and Rubin (1994) <doi:10.1111/j.1467-9280.1994.tb00281.x>.
Author: Mabene Yasmine [aut, cre],
Bind Marie [aut],
Harvard University [cph]
Maintainer: Mabene Yasmine <ymabene@stanford.edu>
Diff between Counternull versions 0.1.0 dated 2021-12-17 and 0.2.0 dated 2023-08-27
Counternull-0.1.0/Counternull/R/create_counternull_distribution.R |only Counternull-0.1.0/Counternull/R/create_counternull_distribution_no_hist.R |only Counternull-0.1.0/Counternull/R/create_null_distribution.R |only Counternull-0.1.0/Counternull/R/find_counternull_set.R |only Counternull-0.1.0/Counternull/R/find_test_stat_cohens_d.R |only Counternull-0.1.0/Counternull/R/find_test_stat_diff_means.R |only Counternull-0.1.0/Counternull/R/find_test_stat_paired_t.R |only Counternull-0.1.0/Counternull/R/find_test_stat_t.R |only Counternull-0.1.0/Counternull/R/permutation_counter_cohens_d.R |only Counternull-0.1.0/Counternull/R/permutation_counter_diff_means.R |only Counternull-0.1.0/Counternull/R/permutation_counter_paired_t.R |only Counternull-0.1.0/Counternull/R/permutation_counter_t.R |only Counternull-0.1.0/Counternull/R/permutation_null_cohens_d.R |only Counternull-0.1.0/Counternull/R/permutation_null_diff_means.R |only Counternull-0.1.0/Counternull/R/permutation_null_paired_t.R |only Counternull-0.1.0/Counternull/R/permutation_null_t.R |only Counternull-0.1.0/Counternull/R/rand_matrix_1D.R |only Counternull-0.1.0/Counternull/R/rand_matrix_1DS.R |only Counternull-0.1.0/Counternull/R/sample_district_1D.R |only Counternull-0.1.0/Counternull/R/sample_district_1DS.R |only Counternull-0.1.0/Counternull/data/rand_matrix_1D.rda |only Counternull-0.1.0/Counternull/data/rand_matrix_1DS.rda |only Counternull-0.1.0/Counternull/data/sample_district_1D.rda |only Counternull-0.1.0/Counternull/data/sample_district_1DS.rda |only Counternull-0.1.0/Counternull/inst/extdata/sample_district.csv |only Counternull-0.1.0/Counternull/inst/extdata/sample_district_1D.csv |only Counternull-0.1.0/Counternull/inst/extdata/sample_district_1DS.csv |only Counternull-0.1.0/Counternull/man/create_counternull_distribution.Rd |only Counternull-0.1.0/Counternull/man/create_counternull_distribution_no_hist.Rd |only Counternull-0.1.0/Counternull/man/create_null_distribution.Rd |only Counternull-0.1.0/Counternull/man/figures/README-example-4.png |only Counternull-0.1.0/Counternull/man/figures/README-pressure-1.png |only Counternull-0.1.0/Counternull/man/find_counternull_set.Rd |only Counternull-0.1.0/Counternull/man/find_test_stat_cohens_d.Rd |only Counternull-0.1.0/Counternull/man/find_test_stat_diff_means.Rd |only Counternull-0.1.0/Counternull/man/find_test_stat_paired_t.Rd |only Counternull-0.1.0/Counternull/man/find_test_stat_t.Rd |only Counternull-0.1.0/Counternull/man/permutation_counter_cohens_d.Rd |only Counternull-0.1.0/Counternull/man/permutation_counter_diff_means.Rd |only Counternull-0.1.0/Counternull/man/permutation_counter_paired_t.Rd |only Counternull-0.1.0/Counternull/man/permutation_counter_t.Rd |only Counternull-0.1.0/Counternull/man/permutation_null_cohens_d.Rd |only Counternull-0.1.0/Counternull/man/permutation_null_diff_means.Rd |only Counternull-0.1.0/Counternull/man/permutation_null_paired_t.Rd |only Counternull-0.1.0/Counternull/man/permutation_null_t.Rd |only Counternull-0.1.0/Counternull/man/rand_matrix_1D.Rd |only Counternull-0.1.0/Counternull/man/rand_matrix_1DS.Rd |only Counternull-0.1.0/Counternull/man/sample_district_1D.Rd |only Counternull-0.1.0/Counternull/man/sample_district_1DS.Rd |only Counternull-0.2.0/Counternull/DESCRIPTION | 30 Counternull-0.2.0/Counternull/MD5 | 105 +- Counternull-0.2.0/Counternull/NAMESPACE | 25 Counternull-0.2.0/Counternull/NEWS.md |only Counternull-0.2.0/Counternull/R/adjust_pvalues.R |only Counternull-0.2.0/Counternull/R/count.R |only Counternull-0.2.0/Counternull/R/counternull_dist.R |only Counternull-0.2.0/Counternull/R/create_fisher_interval.R |only Counternull-0.2.0/Counternull/R/create_null_rand.R |only Counternull-0.2.0/Counternull/R/create_randomization_matrix.R |only Counternull-0.2.0/Counternull/R/find_counternull_values.R | 450 ++++++---- Counternull-0.2.0/Counternull/R/find_counternull_values_int.R |only Counternull-0.2.0/Counternull/R/find_set.R |only Counternull-0.2.0/Counternull/R/find_test_stat.R |only Counternull-0.2.0/Counternull/R/fisher_binary.R |only Counternull-0.2.0/Counternull/R/fisher_count_wrapper.R |only Counternull-0.2.0/Counternull/R/joint_p.R |only Counternull-0.2.0/Counternull/R/joint_p_wrapper.R |only Counternull-0.2.0/Counternull/R/perm_wrapper.R |only Counternull-0.2.0/Counternull/R/sample_data.R |only Counternull-0.2.0/Counternull/R/sample_matrix.R |only Counternull-0.2.0/Counternull/README.md | 86 - Counternull-0.2.0/Counternull/build/partial.rdb |binary Counternull-0.2.0/Counternull/build/vignette.rds |only Counternull-0.2.0/Counternull/data/sample_data.rda |only Counternull-0.2.0/Counternull/data/sample_matrix.rda |only Counternull-0.2.0/Counternull/inst/doc |only Counternull-0.2.0/Counternull/inst/extdata/sample_data.csv |only Counternull-0.2.0/Counternull/man/adjust_pvalues.Rd |only Counternull-0.2.0/Counternull/man/create_fisher_interval.Rd |only Counternull-0.2.0/Counternull/man/create_null_rand.Rd |only Counternull-0.2.0/Counternull/man/create_randomization_matrix.Rd |only Counternull-0.2.0/Counternull/man/figures/README-example-1.png |binary Counternull-0.2.0/Counternull/man/figures/README-example-2.png |binary Counternull-0.2.0/Counternull/man/figures/README-example-3.png |binary Counternull-0.2.0/Counternull/man/find_counternull_values.Rd | 118 -- Counternull-0.2.0/Counternull/man/find_test_stat.Rd |only Counternull-0.2.0/Counternull/man/sample_data.Rd |only Counternull-0.2.0/Counternull/man/sample_matrix.Rd |only Counternull-0.2.0/Counternull/tests |only Counternull-0.2.0/Counternull/vignettes |only 90 files changed, 465 insertions(+), 349 deletions(-)
Title: Agent-Based Models in R
Description: Supplies tools for running agent-based models (ABM) in R, as discussed in Gochanour et al. (2022) <doi:10.1111/2041-210X.14014>. The package contains two movement functions, each of which is based on the Ornstein-Uhlenbeck (OU) model (Ornstein & Uhlenbeck, 1930) <doi:10.1103/PhysRev.36.823>. It also contains several visualization and data summarization functions to facilitate the presentation of simulation results.
Author: Benjamin Gochanour [aut, cre],
Javier Fernandez-Lopez [aut],
Andrea Contina [aut]
Maintainer: Benjamin Gochanour <ben.gochanour@gmail.com>
Diff between abmR versions 1.0.9 dated 2023-06-07 and 1.0.10 dated 2023-08-27
DESCRIPTION | 8 ++++---- MD5 | 20 ++++++++++---------- NAMESPACE | 3 ++- R/energySIM_helper.R | 4 ++-- R/energyVIZ.R | 2 +- R/get_ex_data.R | 3 ++- R/moveSIM_helper.R | 2 -- R/moveVIZ.R | 2 +- README.md | 2 +- man/energySIM_helper.Rd | 8 ++++---- man/moveSIM_helper.Rd | 3 --- 11 files changed, 27 insertions(+), 30 deletions(-)
Title: Access the Trello API
Description: An R client for the Trello API. Supports free-tier features such as
access to private boards, creating and updating cards and other resources,
and downloading data in a structured way.
Author: Jakub Chromec [aut, cre]
Maintainer: Jakub Chromec <chromec.jakub@gmail.com>
Diff between trelloR versions 0.7.1 dated 2021-04-21 and 0.8.0 dated 2023-08-27
trelloR-0.7.1/trelloR/R/trelloR.R |only trelloR-0.7.1/trelloR/man/trelloR.Rd |only trelloR-0.8.0/trelloR/DESCRIPTION | 15 trelloR-0.8.0/trelloR/MD5 | 25 trelloR-0.8.0/trelloR/NAMESPACE | 2 trelloR-0.8.0/trelloR/NEWS.md |only trelloR-0.8.0/trelloR/R/get_batch.R |only trelloR-0.8.0/trelloR/R/get_card.R | 7 trelloR-0.8.0/trelloR/R/trelloR-package.R |only trelloR-0.8.0/trelloR/README.md | 17 trelloR-0.8.0/trelloR/build/vignette.rds |binary trelloR-0.8.0/trelloR/inst/doc/auth-access.html | 437 +++++++++--- trelloR-0.8.0/trelloR/inst/doc/create-update-delete.html | 414 ++++++++--- trelloR-0.8.0/trelloR/inst/doc/getting-public-data.html | 541 ++++++++++----- trelloR-0.8.0/trelloR/man/get_batch.Rd |only trelloR-0.8.0/trelloR/man/get_card.Rd | 3 trelloR-0.8.0/trelloR/man/trelloR-package.Rd |only 17 files changed, 1075 insertions(+), 386 deletions(-)
Title: Check-Fields and Check-Boxes for 'rmarkdown'
Description: Creates auto checking check-fields and check-boxes for 'rmarkdown' html. It could be used in class, when teacher share materials and tasks, so student can solve some problems and check themselves. In contrast with the 'learnr' package the 'checkdown' package works without 'shiny'.
Author: George Moroz [aut, cre]
Maintainer: George Moroz <agricolamz@gmail.com>
Diff between checkdown versions 0.0.7 dated 2020-11-01 and 0.0.8 dated 2023-08-27
DESCRIPTION | 12 MD5 | 30 +- NAMESPACE | 4 NEWS | 47 +-- R/check_hint.R | 98 +++--- R/check_hints.R | 128 ++------ R/check_question.R | 268 ++++++++---------- R/insert_images.R | 24 - build/vignette.rds |binary inst/doc/start_checkdown.R | 71 ++-- inst/doc/start_checkdown.Rmd | 110 ++++--- inst/doc/start_checkdown.html | 600 ++++++++++++++++++++++++------------------ man/check_hint.Rd | 11 man/check_hints.Rd | 14 man/check_question.Rd | 21 - vignettes/start_checkdown.Rmd | 110 ++++--- 16 files changed, 813 insertions(+), 735 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-12 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-09-24 0.3.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-06-22 1.1-2
2014-03-04 1.1-1
2014-01-09 1.1
Title: Variational Mode Decomposition Based Machine Learning Models
Description: Application of Variational Mode Decomposition based different Machine Learning models for univariate time series forecasting. For method details see (i) K. Dragomiretskiy and D. Zosso (2014) <doi:10.1109/TSP.2013.2288675>; (ii) Pankaj Das (2020) <http://krishi.icar.gov.in/jspui/handle/123456789/44138>.
Author: Pankaj Das [aut, cre],
Girish Kumar Jha [aut],
Tauqueer Ahmad [aut],
Achal Lama [aut],
Lampros Mouselimis [cph]
Maintainer: Pankaj Das <pankaj.das2@icar.gov.in>
Diff between VMDML versions 0.1.0 dated 2022-08-09 and 0.1.1 dated 2023-08-27
DESCRIPTION | 13 ++++++++----- LICENSE |only MD5 | 22 ++++++++++++++++------ NAMESPACE | 1 + R/VMDELM.R |only build |only inst |only man/VMDARIMA.Rd | 4 ++-- man/VMDELM.Rd |only man/VMDRF.Rd | 7 +++---- man/VMDSVR.Rd | 4 ++-- man/VMDTDNN.Rd | 6 +++--- tests |only vignettes |only 14 files changed, 35 insertions(+), 22 deletions(-)
Title: Functions to Analyze Single System Data
Description: Functions to visually and statistically analyze single system data.
Author: Charles Auerbach [aut, cre],
Wendy Zeitlin [aut]
Maintainer: Charles Auerbach <auerbach@yu.edu>
Diff between SSDforR versions 1.5.29 dated 2023-02-17 and 1.5.31 dated 2023-08-27
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/ABplot.R | 12 +++++++----- man/meanabove.rd | 23 ++++++++++------------- 4 files changed, 24 insertions(+), 25 deletions(-)
Title: Compressive Sampling: Sparse Signal Recovery Utilities
Description: Utilities for sparse signal recovery suitable for compressed sensing. L1, L2 and TV penalties, DFT basis matrix, simple sparse signal generator, mutual cumulative coherence between two matrices and examples, Lp complex norm, scaling back regression coefficients.
Author: Mehmet Suzen [aut, cre]
Maintainer: Mehmet Suzen <mehmet.suzen@physics.org>
Diff between R1magic versions 0.3.3 dated 2022-04-10 and 0.3.4 dated 2023-08-27
R1magic-0.3.3/R1magic/man/R1magic-package.Rd |only R1magic-0.3.4/R1magic/DESCRIPTION | 8 ++++---- R1magic-0.3.4/R1magic/MD5 | 5 ++--- R1magic-0.3.4/R1magic/README.md | 1 - 4 files changed, 6 insertions(+), 8 deletions(-)
Title: Fractal Image Data Generator
Description: Generates image data for fractals (Julia and Mandelbrot sets) on the complex plane in the given region and resolution. Benoit B Mandelbrot (1982).
Author: Mehmet Suzen [aut, cre]
Maintainer: Mehmet Suzen <mehmet.suzen@physics.org>
Diff between Julia versions 1.3.4 dated 2022-04-19 and 1.3.5 dated 2023-08-27
Julia-1.3.4/Julia/man/Julia-package.Rd |only Julia-1.3.5/Julia/DESCRIPTION | 8 ++++---- Julia-1.3.5/Julia/MD5 | 5 ++--- Julia-1.3.5/Julia/README.md | 6 ++++-- 4 files changed, 10 insertions(+), 9 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-04-02 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-01-05 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-05-13 0.1-3
2013-11-28 0.1-2
2013-07-24 0.1-1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-04-19 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-10-25 0.3.0
2016-06-06 0.2
2011-05-17 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-01-07 0.1.2
2021-01-05 0.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-05-08 1.0.2
2017-02-28 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-02-16 2.1.4.1
2015-08-11 2.1.4
2015-07-14 2.1.2
2015-07-04 2.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2012-03-27 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-06-30 1.0.2
2021-01-06 1.0.1
2020-11-30 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-10-13 0.5.4
2021-05-17 0.5.3
2020-05-18 0.5.2
2018-04-19 0.5.1
2017-05-27 0.5.0
2015-12-28 0.4.0
2015-07-01 0.3.0
2014-06-06 0.2.2
2013-08-23 0.2.0
2013-06-04 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-06-26 1.4.1
2014-09-09 1.3.0
Title: Retrieving Information of Proteins from Uniprot
Description: Connect to Uniprot <https://www.uniprot.org/> to retrieve information about proteins using their accession number such information could be name or taxonomy information, For detailed information kindly read the publication <https://www.sciencedirect.com/science/article/pii/S1874391919303859>.
Author: Mohamed Soudy [aut, cre],
Ali Mostafa [aut]
Maintainer: Mohamed Soudy <MohmedSoudy2009@gmail.com>
Diff between UniprotR versions 2.2.2 dated 2022-10-04 and 2.3.0 dated 2023-08-27
DESCRIPTION | 11 +-- MD5 | 10 +-- NAMESPACE | 4 - R/ConvertID.R | 176 ++++++++++++++++++++++++++++++------------------------- inst/CITATION | 21 ++---- man/ConvertID.Rd | 5 - 6 files changed, 121 insertions(+), 106 deletions(-)
Title: Generalized Latent Markov Models
Description: Latent Markov models for longitudinal continuous and categorical data. See Bartolucci, Pandolfi, Pennoni (2017)<doi:10.18637/jss.v081.i04>.
Author: Francesco Bartolucci [aut, cre],
Silvia Pandolfi [aut],
Fulvia Pennoni [aut],
Alessio Farcomeni [ctb],
Alessio Serafini [ctb]
Maintainer: Francesco Bartolucci <francesco.bartolucci@unipg.it>
Diff between LMest versions 3.1.1 dated 2023-03-31 and 3.1.2 dated 2023-08-27
DESCRIPTION | 10 +++++----- MD5 | 10 +++++----- R/bootstrap.R | 8 ++++---- R/lmbasic.cont.R | 5 ++--- build/vignette.rds |binary inst/doc/vignetteLMest.html | 12 ++++++------ 6 files changed, 22 insertions(+), 23 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-01-08 0.2-0
2018-04-09 0.1-9
2016-11-30 0.1-8
2016-08-04 0.1.4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-11-29 1.2
2020-11-05 1.1
2013-01-14 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-05-17 1.3.0
2022-04-13 1.2.4
2022-03-30 1.2.3
2021-08-11 1.2.2
2021-05-12 1.2.1
2021-04-22 1.2.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-04-29 1.0.0
Title: Structural Equation Modeling Using the Reticular Action Model
(RAM) Notation
Description: We rewrite of RAMpath software developed by John McArdle and Steven Boker as an R package. In addition to performing regular SEM analysis through the R package lavaan, RAMpath has unique features. First, it can generate path diagrams according to a given model. Second, it can display path tracing rules through path diagrams and decompose total effects into their respective direct and indirect effects as well as decompose variance and covariance into individual bridges. Furthermore, RAMpath can fit dynamic system models automatically based on latent change scores and generate vector field plots based upon results obtained from a bivariate dynamic system. Starting version 0.4, RAMpath can conduct power analysis for both univariate and bivariate latent change score models.
Author: Zhiyong Zhang, Jack McArdle, Aki Hamagami, & Kevin Grimm
Maintainer: Zhiyong Zhang <zzhang4@nd.edu>
Diff between RAMpath versions 0.4 dated 2016-10-05 and 0.5.1 dated 2023-08-27
DESCRIPTION | 10 +++++----- MD5 | 32 ++++++++++++++++---------------- man/RAMpath-package.Rd | 8 +++----- man/makeBridgeList.Rd | 2 +- man/makePathList.Rd | 2 +- man/makeSpanList.Rd | 2 +- man/plot.RAMpath.Rd | 2 +- man/plot.lcs.power.Rd | 2 +- man/powerBLCS.Rd | 2 +- man/powerLCS.Rd | 2 +- man/ram2lavaan.Rd | 2 +- man/ramBLCS.Rd | 5 +++-- man/ramFit.Rd | 14 +++++++++----- man/ramLCM.Rd | 8 +++++--- man/ramLCS.Rd | 5 +++-- man/ramShowModel.Rd | 2 +- man/ramVF.Rd | 2 +- 17 files changed, 54 insertions(+), 48 deletions(-)
Title: Fit Models in a Pipe
Description: Improve the usage of model fitting functions within a piped
work flow.
Author: Magnus Thor Torfason
Maintainer: Magnus Thor Torfason <m@zulutime.net>
Diff between zfit versions 0.3.0 dated 2022-01-17 and 0.4.0 dated 2023-08-27
zfit-0.3.0/zfit/R/zfit_base_zfunction_zfitter.R |only zfit-0.3.0/zfit/man/zfitter.Rd |only zfit-0.3.0/zfit/tests/testthat/test-zfit_base_zfunction_zfitter.R |only zfit-0.4.0/zfit/DESCRIPTION | 26 - zfit-0.4.0/zfit/MD5 | 43 +-- zfit-0.4.0/zfit/NAMESPACE | 4 zfit-0.4.0/zfit/NEWS.md | 15 - zfit-0.4.0/zfit/R/base_a_zfunction.R |only zfit-0.4.0/zfit/R/base_b_zfold.R |only zfit-0.4.0/zfit/R/base_c_zfitter.R |only zfit-0.4.0/zfit/R/base_utils.R |only zfit-0.4.0/zfit/R/zfit-package.R |only zfit-0.4.0/zfit/R/zfit_external.R |only zfit-0.4.0/zfit/R/zfit_glm.R | 8 zfit-0.4.0/zfit/R/zfit_lm.R | 25 - zfit-0.4.0/zfit/R/zfit_zprint.R | 31 +- zfit-0.4.0/zfit/README.md | 136 ++++------ zfit-0.4.0/zfit/inst/WORDLIST | 9 zfit-0.4.0/zfit/man/curly_arg.Rd |only zfit-0.4.0/zfit/man/external_fitters.Rd |only zfit-0.4.0/zfit/man/include/overview.Rmd | 15 - zfit-0.4.0/zfit/man/include/overview.html |only zfit-0.4.0/zfit/man/zfit.Rd | 93 ++---- zfit-0.4.0/zfit/man/zfunction.Rd | 119 +++++++- zfit-0.4.0/zfit/man/zglm.Rd | 3 zfit-0.4.0/zfit/man/zlm.Rd | 24 - zfit-0.4.0/zfit/man/zprint.Rd | 28 +- zfit-0.4.0/zfit/tests/testthat/helper-functions.R |only zfit-0.4.0/zfit/tests/testthat/test-zfit_base.R |only zfit-0.4.0/zfit/tests/testthat/test-zfit_external.R |only 30 files changed, 328 insertions(+), 251 deletions(-)
Title: Approximate the Variance of the Horvitz-Thompson Total Estimator
Description: Variance approximations for the
Horvitz-Thompson total estimator in Unequal Probability Sampling
using only first-order inclusion probabilities.
See Matei and Tillé (2005) and Haziza, Mecatti and Rao (2008) for details.
Author: Roberto Sichera [aut, cre]
Maintainer: Roberto Sichera <rob.sichera@gmail.com>
Diff between UPSvarApprox versions 0.1.3 dated 2022-06-12 and 0.1.4 dated 2023-08-27
UPSvarApprox-0.1.3/UPSvarApprox/man/UPSvarApprox.Rd |only UPSvarApprox-0.1.4/UPSvarApprox/DESCRIPTION | 10 UPSvarApprox-0.1.4/UPSvarApprox/MD5 | 40 UPSvarApprox-0.1.4/UPSvarApprox/NAMESPACE | 8 UPSvarApprox-0.1.4/UPSvarApprox/R/package-UPSvarApprox.R | 5 UPSvarApprox-0.1.4/UPSvarApprox/R/utils.R | 32 UPSvarApprox-0.1.4/UPSvarApprox/R/varEst_class2.R | 438 +++---- UPSvarApprox-0.1.4/UPSvarApprox/R/varEst_class3.R | 674 ++++++------ UPSvarApprox-0.1.4/UPSvarApprox/man/UPSvarApprox-package.Rd |only UPSvarApprox-0.1.4/UPSvarApprox/man/Var_approx.Rd | 240 ++-- UPSvarApprox-0.1.4/UPSvarApprox/man/approx_var_est.Rd | 492 ++++---- UPSvarApprox-0.1.4/UPSvarApprox/man/is.wholenumber.Rd | 42 UPSvarApprox-0.1.4/UPSvarApprox/man/var_Berger.Rd | 56 UPSvarApprox-0.1.4/UPSvarApprox/man/var_Brewer_class2.Rd | 46 UPSvarApprox-0.1.4/UPSvarApprox/man/var_Brewer_class3.Rd | 68 - UPSvarApprox-0.1.4/UPSvarApprox/man/var_Deville.Rd | 52 UPSvarApprox-0.1.4/UPSvarApprox/man/var_FixedPoint.Rd | 54 UPSvarApprox-0.1.4/UPSvarApprox/man/var_Hajek.Rd | 46 UPSvarApprox-0.1.4/UPSvarApprox/man/var_HartleyRao.Rd | 58 - UPSvarApprox-0.1.4/UPSvarApprox/man/var_MateiTille.Rd | 78 - UPSvarApprox-0.1.4/UPSvarApprox/man/var_Rosen.Rd | 46 UPSvarApprox-0.1.4/UPSvarApprox/man/var_Tille.Rd | 68 - 22 files changed, 1275 insertions(+), 1278 deletions(-)
Title: In-Text Resizer for Images, Tables and Fancy Resizable
Containers in 'Shiny', 'Rmarkdown' and 'Quarto' Documents
Description: Automatic resizing toolbar for containers, images and tables. Most suitable to include resize functionality in 'Markdown', 'Rmarkdown' and 'Quarto' documents.
Author: Obinna Obianom [aut, cre]
Maintainer: Obinna Obianom <idonshayo@gmail.com>
Diff between r2resize versions 1.7 dated 2023-07-07 and 1.8 dated 2023-08-27
DESCRIPTION | 13 +- MD5 | 39 ++++---- NEWS.md | 5 + R/containerResizer.R | 69 +++++++++------ R/markdownResizer.R | 47 ++++++++-- R/sliderCards.R | 26 +++++ inst/doc/example_frequently_asked_r2resize.html | 4 inst/doc/introduction_r2resize.html | 4 inst/doc/resizable_containers_split_screen_r2resize.html | 4 inst/examples/sample1.html |only man/add.resizer.Rd | 41 ++++++++ man/elastiCard.Rd | 24 +++++ man/empahsisCard.Rd | 10 +- man/emphasisCard.Rd | 18 +++ man/flexCard.Rd | 1 man/r2resize-package.Rd | 2 man/sizeableCard.Rd | 11 ++ man/splitCard.Rd | 7 + man/splitCard2.Rd | 13 +- man/windowCard.Rd | 8 + tests |only 21 files changed, 266 insertions(+), 80 deletions(-)
Title: Generalized Nonlinear Models
Description: Functions to specify and fit generalized nonlinear models,
including models with multiplicative interaction terms such as the
UNIDIFF model from sociology and the AMMI model from crop science, and
many others. Over-parameterized representations of models are used
throughout; functions are provided for inference on estimable
parameter combinations, as well as standard methods for diagnostics
etc.
Author: Heather Turner [aut, cre] ,
David Firth [aut] ,
Brian Ripley [ctb],
Bill Venables [ctb],
Douglas M. Bates [ctb],
Martin Maechler [ctb]
Maintainer: Heather Turner <ht@heatherturner.net>
Diff between gnm versions 1.1-3 dated 2023-08-24 and 1.1-4 dated 2023-08-27
gnm-1.1-3/gnm/tests/testthat/outputs |only gnm-1.1-3/gnm/tests/testthat/testthat-problems.rds |only gnm-1.1-4/gnm/DESCRIPTION | 43 ++++++++++++--------- gnm-1.1-4/gnm/MD5 | 43 +++++++++------------ gnm-1.1-4/gnm/NEWS.md | 5 ++ gnm-1.1-4/gnm/inst/doc/gnmOverview.pdf |binary gnm-1.1-4/gnm/tests/testthat.R | 8 +++ gnm-1.1-4/gnm/tests/testthat/_snaps |only gnm-1.1-4/gnm/tests/testthat/test-RC.R | 2 gnm-1.1-4/gnm/tests/testthat/test-RChomog.R | 2 gnm-1.1-4/gnm/tests/testthat/test-Symm.R | 2 gnm-1.1-4/gnm/tests/testthat/test-biplot.R | 31 +++++++-------- gnm-1.1-4/gnm/tests/testthat/test-bwt.R | 9 +--- gnm-1.1-4/gnm/tests/testthat/test-confint.gnm.R | 5 -- gnm-1.1-4/gnm/tests/testthat/test-diagonalRef.R | 6 -- gnm-1.1-4/gnm/tests/testthat/test-doubleUnidiff.R | 10 +--- gnm-1.1-4/gnm/tests/testthat/test-gammi.R | 8 +-- gnm-1.1-4/gnm/tests/testthat/test-glm.R | 5 +- gnm-1.1-4/gnm/tests/testthat/test-hskewL.R | 14 +++--- gnm-1.1-4/gnm/tests/testthat/test-logistic.R | 11 ++--- gnm-1.1-4/gnm/tests/testthat/test-stereotype.R | 5 -- 21 files changed, 108 insertions(+), 101 deletions(-)
Title: Robust Coefficient Alpha and Omega with Missing and Non-Normal
Data
Description: Cronbach's alpha and McDonald's omega are widely used reliability or internal consistency measures in social, behavioral and education sciences. Alpha is reported in nearly every study that involves measuring a construct through multiple test items. The package 'coefficientalpha' calculates coefficient alpha and coefficient omega with missing data and non-normal data. Robust standard errors and confidence intervals are also provided. A test is also available to test the tau-equivalent and homogeneous assumptions. Since Version 0.5, the bootstrap confidence intervals were added.
Author: Zhiyong Zhang and Ke-Hai Yuan
Maintainer: Zhiyong Zhang <johnnyzhz@gmail.com>
Diff between coefficientalpha versions 0.7.1 dated 2023-08-26 and 0.7.2 dated 2023-08-27
DESCRIPTION | 6 +++--- MD5 | 4 ++-- man/coefficientalpha-package.Rd | 6 ++---- 3 files changed, 7 insertions(+), 9 deletions(-)
More information about coefficientalpha at CRAN
Permanent link
Title: Commodore Amiga File Format Handler
Description: Modern software often poorly support older file formats. This
package intends to handle many file formats that were native to the
antiquated Commodore Amiga machine. This package focuses on file types from
the older Amiga operating systems (<= 3.0). It will read and write specific
file formats and coerces them into more contemporary data.
Author: Pepijn de Vries [aut, cre, dtc]
Maintainer: Pepijn de Vries <pepijn.devries@outlook.com>
Diff between AmigaFFH versions 0.4.2 dated 2023-08-22 and 0.4.3 dated 2023-08-27
DESCRIPTION | 8 MD5 | 12 - NEWS | 6 R/AmigaFFH-package.r | 2 R/iff.8svx.r | 532 ++++++++++++++++++++++++------------------------ man/AmigaFFH-package.Rd | 2 man/play.Rd | 2 7 files changed, 285 insertions(+), 279 deletions(-)
Title: Simulate and Sample from Ecological Interaction Networks
Description: Randomly generate a wide range of interaction networks with
specified size, average degree, modularity, and topological
structure. Sample nodes and links from within simulated networks
randomly, by degree, by module, or by abundance. Simulations
and sampling routines are implemented in 'FORTRAN', providing
efficient generation times even for large networks. Basic
visualization methods also included. Algorithms implemented
here are described in de Aguiar et al. (2017) <arXiv:1708.01242>.
Author: Marcus de Aguiar [aut, cph] ,
Erica Newman [aut] ,
Mathias Pires [aut] ,
NIMBioS [fnd],
Carl Boettiger [aut, cre]
Maintainer: Carl Boettiger <cboettig@gmail.com>
Diff between EcoNetGen versions 0.2.3 dated 2019-07-13 and 0.2.4 dated 2023-08-27
DESCRIPTION | 7 +++---- MD5 | 22 +++++++++++----------- NEWS.md | 19 +++++++++++++------ README.md | 17 ++++++----------- man/figures/README-adj_plot-1.png |binary man/figures/README-igraph_plot-1.png |binary man/figures/README-members-1.png |binary man/figures/README-sampled_adj-1.png |binary man/figures/README-sampled_hairball-1.png |binary man/figures/README-subgraph-1.png |binary src/FortranNetGen.f90 | 12 ------------ src/FortranSampling.f90 | 2 -- 12 files changed, 33 insertions(+), 46 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-06-15 1.0.0
Title: Plot Raster Map Tiles from Open Street Map and Other Sources
Description: Download and plot Open Street Map <https://www.openstreetmap.org/>,
Bing Maps <https://www.bing.com/maps> and other tiled map sources. Use to create
basemaps quickly and add hillshade to vector-based maps.
Author: Dewey Dunnington [aut, cre] ,
Timothee Giraud [ctb]
Maintainer: Dewey Dunnington <dewey@fishandwhistle.net>
Diff between rosm versions 0.2.6 dated 2022-06-09 and 0.3.0 dated 2023-08-27
rosm-0.2.6/rosm/R/0_tilespec.R |only rosm-0.2.6/rosm/R/1_tiles.R |only rosm-0.2.6/rosm/R/bingmaps.R |only rosm-0.2.6/rosm/R/cachedir.R |only rosm-0.2.6/rosm/R/commonplot.R |only rosm-0.2.6/rosm/R/extract.R |only rosm-0.2.6/rosm/R/osmplot.R |only rosm-0.2.6/rosm/R/osmraster.R |only rosm-0.2.6/rosm/R/overlays.R |only rosm-0.2.6/rosm/R/projections.R |only rosm-0.2.6/rosm/R/rosm-package.R |only rosm-0.2.6/rosm/R/tileurl.R |only rosm-0.2.6/rosm/R/util.R |only rosm-0.2.6/rosm/man/as.tile_source.Rd |only rosm-0.2.6/rosm/man/bmaps.plot.Rd |only rosm-0.2.6/rosm/man/bmaps.types.Rd |only rosm-0.2.6/rosm/man/extract_bbox.Rd |only rosm-0.2.6/rosm/man/osm.image.Rd |only rosm-0.2.6/rosm/man/osm.lines.Rd |only rosm-0.2.6/rosm/man/osm.plot.Rd |only rosm-0.2.6/rosm/man/osm.points.Rd |only rosm-0.2.6/rosm/man/osm.polygon.Rd |only rosm-0.2.6/rosm/man/osm.segments.Rd |only rosm-0.2.6/rosm/man/osm.text.Rd |only rosm-0.2.6/rosm/man/osm.types.Rd |only rosm-0.2.6/rosm/man/register_tile_source.Rd |only rosm-0.2.6/rosm/man/rosm.Rd |only rosm-0.2.6/rosm/tests/testthat/tests.R |only rosm-0.3.0/rosm/DESCRIPTION | 15 ++-- rosm-0.3.0/rosm/MD5 | 81 +++++++++++++---------- rosm-0.3.0/rosm/NAMESPACE | 21 +++++ rosm-0.3.0/rosm/NEWS.md |only rosm-0.3.0/rosm/R/deprecated.R |only rosm-0.3.0/rosm/R/raster.R |only rosm-0.3.0/rosm/R/tile-math.R |only rosm-0.3.0/rosm/R/url.R |only rosm-0.3.0/rosm/R/utils.R |only rosm-0.3.0/rosm/README.md | 49 +++++-------- rosm-0.3.0/rosm/inst |only rosm-0.3.0/rosm/man/deprecated.Rd |only rosm-0.3.0/rosm/man/figures/README-example-1.png |binary rosm-0.3.0/rosm/man/has_internet.Rd | 4 - rosm-0.3.0/rosm/man/osm_native.Rd |only rosm-0.3.0/rosm/man/osm_raster.Rd |only rosm-0.3.0/rosm/man/osm_tile.Rd |only rosm-0.3.0/rosm/man/osm_tile_covering.Rd |only rosm-0.3.0/rosm/man/osm_url.Rd |only rosm-0.3.0/rosm/man/osm_url_load_async.Rd |only rosm-0.3.0/rosm/man/osm_url_spec.Rd |only rosm-0.3.0/rosm/man/set_default_cachedir.Rd | 2 rosm-0.3.0/rosm/tests/testthat.R | 8 ++ rosm-0.3.0/rosm/tests/testthat/_snaps |only rosm-0.3.0/rosm/tests/testthat/test-deprecated.R |only rosm-0.3.0/rosm/tests/testthat/test-raster.R |only rosm-0.3.0/rosm/tests/testthat/test-tile-math.R |only rosm-0.3.0/rosm/tests/testthat/test-url.R |only rosm-0.3.0/rosm/tests/testthat/test-utils.R |only 57 files changed, 107 insertions(+), 73 deletions(-)