Title: Liouville Copulas
Description: Collections of functions allowing random number generations and
estimation of 'Liouville' copulas, as described in Belzile and Neslehova (2017) <doi:10.1016/j.jmva.2017.05.008>.
Author: Leo Belzile [aut, cre] ,
Christian Genest [aut, ctb],
Alexander J. McNeil [ctb],
Johanna G. Neslehova [ctb]
Maintainer: Leo Belzile <belzilel@gmail.com>
Diff between lcopula versions 1.0.5 dated 2022-04-25 and 1.0.6 dated 2023-04-20
lcopula-1.0.5/lcopula/NEWS |only lcopula-1.0.5/lcopula/inst |only lcopula-1.0.6/lcopula/DESCRIPTION | 10 +++--- lcopula-1.0.6/lcopula/MD5 | 16 ++++------ lcopula-1.0.6/lcopula/NEWS.md |only lcopula-1.0.6/lcopula/R/RcppExports.R | 4 -- lcopula-1.0.6/lcopula/build/partial.rdb |binary lcopula-1.0.6/lcopula/src/RcppExports.cpp | 48 +----------------------------- lcopula-1.0.6/lcopula/src/generic.cpp | 2 - lcopula-1.0.6/lcopula/src/lcopula-init.c | 13 ++------ 10 files changed, 20 insertions(+), 73 deletions(-)
Title: Set of Tools to Data Analysis using Generalized Linear Models
Description: Set of tools to the statistical analysis of data using: (1) normal linear models; (2) generalized linear models; (3) negative binomial regression models as alternative to the Poisson regression models under the presence of overdispersion; (4) beta-binomial and random-clumped binomial regression models as alternative to the binomial regression models under the presence of overdispersion; (5) Zero-inflated and zero-altered regression models to deal with zero-excess in count data; (6) generalized estimating equations for cluster correlated data.
Author: Luis Hernando Vanegas [aut, cre],
Luz Marina Rondon [aut],
Gilberto A. Paula [aut]
Maintainer: Luis Hernando Vanegas <lhvanegasp@unal.edu.co>
Diff between glmtoolbox versions 0.1.6 dated 2023-01-05 and 0.1.7 dated 2023-04-20
DESCRIPTION | 12 MD5 | 82 +- NAMESPACE | 25 R/data.R | 322 ++++++++-- R/geeglm.R | 1314 +++++++++++++++++++++++++++++++++++++++----- R/glms.R | 37 - R/overglm3.R | 11 data/Oranges.rda |only data/amenorrhea.rda |only data/depression.rda |binary data/ldh.rda |only data/shelflife.rda |only man/FisherScoring.Rd | 8 man/Oranges.Rd |only man/Seizures.Rd | 1 man/Steel.Rd | 1 man/Trajan.Rd | 13 man/advertising.Rd | 7 man/amenorrhea.Rd |only man/aucuba.Rd | 1 man/bladder.Rd | 1 man/brains.Rd | 6 man/cellular.Rd | 5 man/cholecystectomy.Rd | 7 man/coupons.Rd | 1 man/depression.Rd | 21 man/dilution.Rd | 6 man/fabric.Rd | 1 man/glmgee.Rd | 9 man/gnmgee.Rd |only man/ldh.Rd |only man/liver.Rd | 1 man/mammary.Rd | 1 man/orobanche.Rd | 4 man/ossification.Rd | 15 man/pipeline.Rd | 6 man/predict.glmgee.Rd | 4 man/races.Rd | 17 man/richness.Rd | 11 man/rinse.Rd | 15 man/shelflife.Rd |only man/skincancer.Rd | 10 man/spruces.Rd | 16 man/stepCriterion.glmgee.Rd | 12 man/swimmers.Rd | 11 man/uti.Rd | 3 man/wglmgee.Rd |only 47 files changed, 1639 insertions(+), 378 deletions(-)
Title: Comparison of Binary Diagnostic Tests in a Paired Study Design
Description: Comparison of the accuracy of two binary diagnostic tests in a "paired" study design, i.e. when each test is applied to each subject in the study.
Author: Christian Stock [aut, cre] ,
Hielscher Thomas [aut],
Andrea Discacciati [aut]
Maintainer: Christian Stock <christian.stock@boehringer-ingelheim.com>
Diff between DTComPair versions 1.1.0 dated 2023-02-23 and 1.2.0 dated 2023-04-20
DTComPair-1.1.0/DTComPair/NEWS |only DTComPair-1.2.0/DTComPair/DESCRIPTION | 15 +++-- DTComPair-1.2.0/DTComPair/MD5 | 16 +++-- DTComPair-1.2.0/DTComPair/NEWS.md |only DTComPair-1.2.0/DTComPair/R/DTComPair.R | 67 ++++++++++++++++++++++-- DTComPair-1.2.0/DTComPair/R/sesp.rel.R |only DTComPair-1.2.0/DTComPair/R/tpffpf.rel.R |only DTComPair-1.2.0/DTComPair/README.md |only DTComPair-1.2.0/DTComPair/inst/CITATION | 12 ++-- DTComPair-1.2.0/DTComPair/man/ellipse.pv.rpv.Rd |only DTComPair-1.2.0/DTComPair/man/pv.rpv.Rd | 11 ++- DTComPair-1.2.0/DTComPair/man/sesp.rel.Rd |only DTComPair-1.2.0/DTComPair/man/tpffpf.rel.Rd |only 13 files changed, 96 insertions(+), 25 deletions(-)
Title: Multivariate Extremes: Bayesian Estimation of the Spectral
Measure
Description: Toolkit for Bayesian estimation of the dependence structure in multivariate extreme value parametric models, following Sabourin and Naveau (2014) <doi:10.1016/j.csda.2013.04.021> and Sabourin, Naveau and Fougeres (2013) <doi:10.1007/s10687-012-0163-0>.
Author: Leo Belzile [cre] ,
Anne Sabourin [aut]
Maintainer: Leo Belzile <belzilel@gmail.com>
Diff between BMAmevt versions 1.0.4 dated 2019-12-18 and 1.0.5 dated 2023-04-20
DESCRIPTION | 10 +- MD5 | 66 ++++++++-------- R/BMAmevt-package.R | 14 --- R/dpairbeta.r | 187 +++++++++++++++++++++++------------------------- R/lAccept.ratio.r | 2 R/posteriorMCMC.pb.r | 2 R/posteriorMCMC.r | 11 +- R/prior.nl.r | 7 - R/prior.pb.r | 9 +- R/proposal.nl.r | 4 - R/proposal.pb.r | 4 - build/vignette.rds |binary inst/doc/BMAmevt.Rnw | 7 - inst/doc/BMAmevt.pdf |binary man/BMAmevt-package.Rd | 16 ---- man/Leeds.Rd | 4 - man/Leeds.frechet.Rd | 4 - man/MCpriorIntFun.Rd | 4 - man/MCpriorIntFun.pb.Rd | 8 +- man/dm.expar.D3k3.Rd | 6 + man/frechetdat.Rd | 4 - man/lAccept.ratio.Rd | 6 - man/nl.Hpar.Rd | 6 + man/nl.MCpar.Rd | 6 + man/pb.Hpar.Rd | 6 + man/pb.MCpar.Rd | 6 + man/posteriorMCMC.Rd | 20 +++-- man/posteriorMCMC.pb.Rd | 6 - man/posteriorMean.Rd | 4 - man/proposal.nl.Rd | 4 - man/proposal.pb.Rd | 4 - man/winterdat.Rd | 6 + vignettes/BMAmevt.Rnw | 7 - vignettes/biblio.bib | 13 +-- 34 files changed, 231 insertions(+), 232 deletions(-)
Title: Spatial Data Analysis
Description: Methods for spatial data analysis with vector (points, lines, polygons) and raster (grid) data. Methods for vector data include geometric operations such as intersect and buffer. Raster methods include local, focal, global, zonal and geometric operations. The predict and interpolate methods facilitate the use of regression type (interpolation, machine learning) models for spatial prediction, including with satellite remote sensing data. Processing of very large files is supported. See the manual and tutorials on <https://rspatial.org/terra/> to get started. 'terra' replaces the 'raster' package ('terra' can do more, and it is faster and easier to use).
Author: Robert J. Hijmans [cre, aut] ,
Roger Bivand [ctb] ,
Edzer Pebesma [ctb] ,
Michael D. Sumner [ctb]
Maintainer: Robert J. Hijmans <r.hijmans@gmail.com>
Diff between terra versions 1.7-23 dated 2023-04-08 and 1.7-28 dated 2023-04-20
DESCRIPTION | 10 - MD5 | 120 ++++++++++---------- NAMESPACE | 3 NEWS.md | 73 ++++++++---- R/Agenerics.R | 5 R/Arith_generics.R | 2 R/RcppExports.R | 4 R/SpatRasterDataset.R | 2 R/Zdeprecated.R | 17 +- R/connect.R | 2 R/distance.R | 7 - R/extract.R | 6 - R/focal.R | 170 +++++++++++++++++++--------- R/geom.R | 23 ++- R/graticule.R | 4 R/lapp.R | 111 +++++++++++++++--- R/levels.R | 63 ++++++++-- R/match.R | 2 R/merge.R | 2 R/plotRGB.R | 190 ++++---------------------------- R/plot_axes.R |only R/plot_legend.R | 219 ++++--------------------------------- R/plot_let.R | 8 + R/plot_raster.R | 176 +++++++++++++++++++++++------ R/plot_vector.R | 8 - R/predict.R | 10 - R/rast.R | 4 R/rasterize.R | 2 R/regress.R |only R/relate.R | 6 - R/replace_values.R | 6 - R/show.R | 4 R/subset.R | 2 R/values.R | 24 +++- R/vect.R | 16 ++ inst/tinytest/test_crop.R |only inst/tinytest/test_extract.R | 10 + inst/tinytest/test_replace.R | 16 ++ inst/tinytest/test_vector-subset.R | 2 man/adjacent.Rd | 4 man/catalyze.Rd | 2 man/extract.Rd | 2 man/factors.Rd | 9 + man/mask.Rd | 19 +-- man/plot.Rd | 6 - man/plotRGB.Rd | 36 ++---- man/rast.Rd | 2 man/regress.Rd |only man/terra-package.Rd | 1 src/RcppExports.cpp | 13 ++ src/RcppFunctions.cpp | 22 +++ src/distRaster.cpp | 17 +- src/gdal_algs.cpp | 62 +++++----- src/geos_methods.cpp | 2 src/math_utils.cpp | 2 src/math_utils.h | 21 +++ src/raster_methods.cpp | 53 ++++++-- src/read_gdal.cpp | 19 ++- src/spatBase.cpp | 4 src/spatRaster.h | 5 src/vecmath.h | 3 src/vecmathse.cpp | 2 src/vector_methods.cpp | 20 +-- 63 files changed, 935 insertions(+), 720 deletions(-)
Title: Tidy Model Stacking
Description: Model stacking is an ensemble technique that involves
training a model to combine the outputs of many diverse statistical
models, and has been shown to improve predictive performance in a
variety of settings. 'stacks' implements a grammar for
'tidymodels'-aligned model stacking.
Author: Simon Couch [aut, cre],
Max Kuhn [aut],
Posit Software, PBC [cph, fnd]
Maintainer: Simon Couch <simon.couch@posit.co>
Diff between stacks versions 1.0.1 dated 2022-12-14 and 1.0.2 dated 2023-04-20
DESCRIPTION | 58 +++++------- LICENSE | 4 MD5 | 85 +++++++++--------- NAMESPACE | 6 + NEWS.md | 15 +++ R/add_candidates.R | 37 +------ R/blend_predictions.R | 43 ++++----- R/collect_parameters.R | 9 + R/expressions.R | 2 R/fit_members.R | 80 ++++++----------- R/plots.R | 8 + R/predict.R | 46 +++++++++ R/print.R | 29 +++--- R/utils.R | 19 +++- README.md | 7 - data/class_folds.rda |binary data/class_res_nn.rda |binary data/class_res_rf.rda |binary data/log_res_nn.rda |binary data/log_res_rf.rda |binary data/reg_folds.rda |binary data/reg_res_lr.rda |binary data/reg_res_sp.rda |binary data/reg_res_svm.rda |binary data/tree_frogs.rda |binary data/tree_frogs_class_test.rda |binary data/tree_frogs_reg_test.rda |binary inst/doc/basics.R | 4 inst/doc/basics.Rmd | 4 inst/doc/basics.html | 90 ++++++++----------- inst/doc/classification.R | 9 + inst/doc/classification.Rmd | 9 + inst/doc/classification.html | 162 +++++++++++++++++------------------ man/add_candidates.Rd | 2 man/augment.model_stack.Rd |only man/figures/logo.png |binary man/reexports.Rd | 5 - man/stacks_description.Rd | 6 - tests/testthat/_snaps/print.md | 74 +++++++-------- tests/testthat/test_add_candidates.R | 1 tests/testthat/test_cran.R | 5 - tests/testthat/test_predict.R | 113 ++++++++++++++++++++++-- vignettes/basics.Rmd | 4 vignettes/classification.Rmd | 9 + 44 files changed, 536 insertions(+), 409 deletions(-)
Title: Treatment Ranking in Network Meta-Analysis
Description: A supportive collection of functions for gathering and plotting treatment ranking metrics after network meta-analysis.
Author: Cheihfeng Chen [aut] ,
Enoch Kang [aut, cre, trl] ,
Wen-Hsuan Hou [aut] ,
Jin-Hua Chen [aut] ,
Yu-Chieh Chuang [aut] ,
Edwin Chan [aut]
Maintainer: Enoch Kang <y.enoch.kang@gmail.com>
Diff between rankinma versions 0.1.5 dated 2023-04-04 and 0.1.6 dated 2023-04-20
DESCRIPTION | 6 +- MD5 | 43 +++++++++-------- NAMESPACE | 3 + NEWS.md | 12 ++++ R/get_metrics.R | 20 ++++---- R/plot_bar.R | 64 ++++++++++++------------- R/plot_beads.R | 83 +++++++++++++++++---------------- R/plot_heat.R | 38 +++++++-------- R/plot_line.R | 50 ++++++++++---------- R/plot_spie.R |only R/rankinma-package.R | 42 ++++++++-------- R/set_metrics.R | 100 ++++++++++------------------------------ README.md | 11 +++- inst/doc/rankinma_vignette.Rmd | 4 + inst/doc/rankinma_vignette.html | 20 +++++--- man/GetMetrics.Rd | 16 +++--- man/PlotBar.Rd | 24 ++++----- man/PlotBeads.Rd | 26 +++++----- man/PlotHeat.Rd | 30 ++++++------ man/PlotLine.Rd | 24 ++++----- man/PlotSpie.Rd |only man/SetMetrics.Rd | 22 ++++---- tests/testthat/test-PlotSpie.R |only vignettes/rankinma_vignette.Rmd | 4 + 24 files changed, 319 insertions(+), 323 deletions(-)
Title: Functions for Analyzing and Plotting Estuary Monitoring Data
Description: Tools for performing routine analysis and plotting tasks with environmental
data from the System Wide Monitoring Program of the National Estuarine
Research Reserve System <https://cdmo.baruch.sc.edu/>. This package builds
on the functionality of the 'SWMPr' package <https://cran.r-project.org/package=SWMPr>,
which is used to retrieve and organize the data. The combined set of tools
address common challenges associated with continuous time series data
for environmental decision making, and are intended for use in annual reporting activities.
References:
Beck, Marcus W. (2016) <ISSN 2073-4859><https://journal.r-project.org/archive/2016-1/beck.pdf>
Rudis, Bob (2014) <https://rud.is/b/2014/11/16/moving-the-earth-well-alaska-hawaii-with-r/>.
United States Environmental Protection Agency (2015) <https://cfpub.epa.gov/si/si_public_record_Report.cfm?Lab=OWOW&dirEntryId=327030>.
United States Environmental Protection Agency (2012) <https://citeseerx.is [...truncated...]
Author: Julie Padilla [aut, ctb],
Marcus Beck [ctb],
Kimberly Cressman [ctb],
Dave Eslinger [aut, ctb],
Kirk Waters [ctb],
Bob Rudis [ctb],
Davis Vaughan [ctb],
Matt Dornback [aut, cre]
Maintainer: Matt Dornback <matt.dornback@noaa.gov>
Diff between SWMPrExtension versions 2.2.3 dated 2022-05-31 and 2.2.4.2 dated 2023-04-20
DESCRIPTION | 26 +++++++++++++---------- MD5 | 34 ++++++++++++++++-------------- NEWS.md | 3 ++ R/cbm_spatial.R | 6 ++--- R/elk_spatial.R | 6 ++--- R/elknmnut.R | 4 +-- R/elksmwq.R | 4 +-- R/import_local_nut.R | 2 - R/sampling_stations.R | 4 +-- R/sampling_stations_backup.R | 4 +-- data/cbm_spatial.RData |only data/elk_spatial.RData |only man/cbm_spatial.Rd | 6 ++--- man/elk_spatial.Rd | 44 ++++++++++++++++++++-------------------- man/elknmnut.Rd | 4 +-- man/elksmwq.Rd | 4 +-- man/import_local_nut.Rd | 2 - man/sampling_stations.Rd | 4 +-- man/sampling_stations_backup.Rd | 4 +-- 19 files changed, 85 insertions(+), 76 deletions(-)
More information about SWMPrExtension at CRAN
Permanent link
Title: Stratified-Petersen Analysis System
Description: The Stratified-Petersen Analysis System (SPAS) is designed
to estimate abundance in two-sample capture-recapture experiments
where the capture and recaptures are stratified. This is a generalization
of the simple Lincoln-Petersen estimator.
Strata may be defined in time or in space or both,
and the s strata in which marking takes place
may differ from the t strata in which recoveries take place.
When s=t, SPAS reduces to the method described by
Darroch (1961) <https://www.jstor.org/stable/2332748>.
When s<t, SPAS implements the methods described in
Plante, Rivest, and Tremblay (1988) <https://www.jstor.org/stable/2533994>.
Schwarz and Taylor (1998) <https://cdnsciencepub.com/doi/10.1139/f97-238> describe
the use of SPAS in estimating return of salmon stratified by
time and geography.
A related package, BTSPAS, deals with temporal stratification where
a spline is used to model the distribution of the population
over time as it passes the second capture location.
Thi [...truncated...]
Author: Carl James Schwarz
Maintainer: Carl James Schwarz <cschwarz.stat.sfu.ca@gmail.com>
Diff between SPAS versions 2020.1.1 dated 2019-12-02 and 2023.3.31 dated 2023-04-20
SPAS-2020.1.1/SPAS/R/SPAS.fit.model.legacy.R |only SPAS-2020.1.1/SPAS/R/SPAS.print.model.legacy.R |only SPAS-2020.1.1/SPAS/man/SPAS.fit.model.legacy.Rd |only SPAS-2020.1.1/SPAS/man/SPAS.print.model.legacy.Rd |only SPAS-2023.3.31/SPAS/DESCRIPTION | 20 SPAS-2023.3.31/SPAS/MD5 | 65 SPAS-2023.3.31/SPAS/NAMESPACE | 6 SPAS-2023.3.31/SPAS/NEWS.md | 7 SPAS-2023.3.31/SPAS/R/SPAS.autopool.R |only SPAS-2023.3.31/SPAS/R/SPAS.extract.par.est.R | 4 SPAS-2023.3.31/SPAS/R/SPAS.fit.model.R | 70 SPAS-2023.3.31/SPAS/R/util.R |only SPAS-2023.3.31/SPAS/R/zzz.R | 6 SPAS-2023.3.31/SPAS/build/vignette.rds |binary SPAS-2023.3.31/SPAS/inst/doc/AutomaticPooling.R |only SPAS-2023.3.31/SPAS/inst/doc/AutomaticPooling.Rmd |only SPAS-2023.3.31/SPAS/inst/doc/AutomaticPooling.html |only SPAS-2023.3.31/SPAS/inst/doc/Conne1991.Rmd | 5 SPAS-2023.3.31/SPAS/inst/doc/Conne1991.html | 1154 +++++---- SPAS-2023.3.31/SPAS/inst/doc/Conne1992.Rmd | 5 SPAS-2023.3.31/SPAS/inst/doc/Conne1992.html | 937 ++++--- SPAS-2023.3.31/SPAS/inst/doc/HarrisonF2011.Rmd | 7 SPAS-2023.3.31/SPAS/inst/doc/HarrisonF2011.html | 2006 ++++++++-------- SPAS-2023.3.31/SPAS/inst/doc/PoolingColumns.Rmd | 5 SPAS-2023.3.31/SPAS/inst/doc/PoolingColumns.html | 1379 +++++----- SPAS-2023.3.31/SPAS/inst/doc/TestingPooledPetersen.Rmd | 6 SPAS-2023.3.31/SPAS/inst/doc/TestingPooledPetersen.html | 1133 ++++----- SPAS-2023.3.31/SPAS/inst/doc/ThingsThatGoWrong.Rmd | 3 SPAS-2023.3.31/SPAS/inst/doc/ThingsThatGoWrong.html | 981 ++++--- SPAS-2023.3.31/SPAS/man/SPAS.autopool.Rd |only SPAS-2023.3.31/SPAS/man/SPAS.extract.par.est.Rd | 4 SPAS-2023.3.31/SPAS/man/SPAS.fit.model.Rd | 26 SPAS-2023.3.31/SPAS/vignettes/AutomaticPooling.Rmd |only SPAS-2023.3.31/SPAS/vignettes/Conne1991.Rmd | 5 SPAS-2023.3.31/SPAS/vignettes/Conne1992.Rmd | 5 SPAS-2023.3.31/SPAS/vignettes/HarrisonF2011.Rmd | 7 SPAS-2023.3.31/SPAS/vignettes/PoolingColumns.Rmd | 5 SPAS-2023.3.31/SPAS/vignettes/TestingPooledPetersen.Rmd | 6 SPAS-2023.3.31/SPAS/vignettes/ThingsThatGoWrong.Rmd | 3 39 files changed, 4302 insertions(+), 3558 deletions(-)
Title: Prediction Intervals for Synthetic Control Methods with Multiple
Treated Units and Staggered Adoption
Description: Implementation of prediction and inference procedures for Synthetic Control methods using least square, lasso, ridge, or simplex-type constraints. Uncertainty is quantified with prediction intervals as developed in Cattaneo, Feng, and Titiunik (2021) <https://mdcattaneo.github.io/papers/Cattaneo-Feng-Titiunik_2021_JASA.pdf>.
Author: Matias Cattaneo [aut],
Yingjie Feng [aut],
Filippo Palomba [aut, cre],
Rocio Titiunik [aut]
Maintainer: Filippo Palomba <fpalomba@princeton.edu>
Diff between scpi versions 2.2.1 dated 2023-03-15 and 2.2.2 dated 2023-04-20
DESCRIPTION | 6 MD5 | 36 - R/scdata.R | 1473 +++++++++++++++++++++++------------------------ R/scdataMulti.R | 11 R/scdataMulti_methods.R | 8 R/scdata_methods.R | 9 R/scest.R | 20 R/scpi-package.R | 4 R/scpi.R | 4 R/scplot.R | 4 R/scplotMulti.R | 4 R/supporting_functions.R | 27 man/scdata.Rd | 4 man/scdataMulti.Rd | 4 man/scest.Rd | 9 man/scpi-package.Rd | 4 man/scpi.Rd | 4 man/scplot.Rd | 4 man/scplotMulti.Rd | 4 19 files changed, 835 insertions(+), 804 deletions(-)
Title: R Bindings to the Calendaring Functionality of 'QuantLib'
Description: 'QuantLib' bindings are provided for R using 'Rcpp' via an evolved version
of the initial header-only 'Quantuccia' project offering an subset of 'QuantLib' (now
maintained separately just for the calendaring subset). See the included file 'AUTHORS'
for a full list of contributors to 'QuantLib' (and hence also 'Quantuccia').
Author: Dirk Eddelbuettel; the authors and contributors of QuantLib
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between qlcal versions 0.0.4 dated 2023-01-11 and 0.0.5 dated 2023-04-20
ChangeLog | 33 ++++++++++++++++++++ DESCRIPTION | 8 ++--- MD5 | 34 +++++++++++---------- R/calendars.R | 1 build/partial.rdb |binary demo |only inst/NEWS.Rd | 9 +++++ src/calendars.cpp | 11 +++++- src/ql/time/calendars/australia.cpp | 52 ++++++++++++++++++++++++++++++--- src/ql/time/calendars/australia.hpp | 15 ++++++--- src/ql/time/calendars/austria.hpp | 2 - src/ql/time/calendars/denmark.cpp | 9 +++++ src/ql/time/calendars/denmark.hpp | 6 +++ src/ql/time/calendars/newzealand.cpp | 22 +++++++++++++ src/ql/time/calendars/newzealand.hpp | 3 + src/ql/time/calendars/turkey.cpp | 18 ++++++----- src/ql/time/calendars/turkey.hpp | 4 +- src/ql/time/calendars/unitedstates.cpp | 17 +++++----- 18 files changed, 192 insertions(+), 52 deletions(-)
Title: Analyzing Data with Cellwise Outliers
Description: Tools for detecting cellwise outliers and robust methods to analyze
data which may contain them. Contains the implementation of the algorithms described in
Rousseeuw and Van den Bossche (2018) <doi:10.1080/00401706.2017.1340909> (open access)
Hubert et al. (2019) <doi:10.1080/00401706.2018.1562989> (open access),
Raymaekers and Rousseeuw (2021) <doi:10.1080/00401706.2019.1677270> (open access),
Raymaekers and Rousseeuw (2021) <doi:10.1007/s10994-021-05960-5> (open access),
Raymaekers and Rousseeuw (2021) <doi:10.52933/jdssv.v1i3.18> (open access),
Raymaekers and Rousseeuw (2022) <arXiv:2207.13493> (open access)
Rousseeuw (2022) <arXiv:2209.12697> (open access).
Examples can be found in the vignettes:
"DDC_examples", "MacroPCA_examples", "wrap_examples", "transfo_examples",
"DI_examples", "cellMCD_examples" , "Correspondence_analysis_examples",
and "cellwise_weights_examples".
Author: Jakob Raymaekers [aut, cre],
Peter Rousseeuw [aut],
Wannes Van den Bossche [ctb],
Mia Hubert [ctb]
Maintainer: Jakob Raymaekers <jakob.raymaekers@kuleuven.be>
Diff between cellWise versions 2.5.0 dated 2022-12-11 and 2.5.2 dated 2023-04-20
DESCRIPTION | 10 MD5 | 74 +- NAMESPACE | 2 R/TVCN.R | 601 ++++++++++------ R/cellHandler.R | 55 - R/cellMap.R | 535 +++++++++----- build/partial.rdb |binary inst/doc/Correspondence_analysis_examples.R | 22 inst/doc/Correspondence_analysis_examples.Rmd | 24 inst/doc/Correspondence_analysis_examples.html | 465 +++--------- inst/doc/DDC_examples.R | 59 + inst/doc/DDC_examples.Rmd | 65 + inst/doc/DDC_examples.html | 780 +++++++-------------- inst/doc/DI_examples.R | 102 +- inst/doc/DI_examples.Rmd | 102 +- inst/doc/DI_examples.html | 535 ++++---------- inst/doc/MacroPCA_examples.R | 52 - inst/doc/MacroPCA_examples.Rmd | 52 - inst/doc/MacroPCA_examples.html | 710 ++++++------------- inst/doc/cellMCD_examples.R | 48 - inst/doc/cellMCD_examples.Rmd | 50 - inst/doc/cellMCD_examples.html | 916 ++++++------------------- inst/doc/cellwise_weights_examples.html | 466 +++--------- inst/doc/transfo_examples.R | 124 +-- inst/doc/transfo_examples.Rmd | 141 ++- inst/doc/transfo_examples.html | 911 ++++++++---------------- inst/doc/wrap_examples.html | 360 ++------- man/cellMap.Rd | 33 man/transfo.Rd | 54 - man/transfo_newdata.Rd |only man/transfo_transformback.Rd |only src/Makevars | 2 src/Makevars.win | 2 vignettes/Correspondence_analysis_examples.Rmd | 24 vignettes/DDC_examples.Rmd | 65 + vignettes/DI_examples.Rmd | 102 +- vignettes/MacroPCA_examples.Rmd | 52 - vignettes/cellMCD_examples.Rmd | 50 - vignettes/transfo_examples.Rmd | 141 ++- 39 files changed, 3081 insertions(+), 4705 deletions(-)
Title: Memory-Based Learning in Spectral Chemometrics
Description: Functions for dissimilarity analysis and memory-based learning
(MBL, a.k.a local modeling) in complex spectral data sets.
Most of these functions are based on the methods presented in
Ramirez-Lopez et al. (2013) <doi:10.1016/j.geoderma.2012.12.014>.
Author: Leonardo Ramirez-Lopez [aut, cre],
Antoine Stevens [aut, ctb],
Claudio Orellano [ctb],
Raphael Viscarra Rossel [ctb],
Zefang Shen [ctb],
Craig Lobsey [ctb],
Alex Wadoux [ctb]
Maintainer: Leonardo Ramirez-Lopez <ramirez.lopez.leo@gmail.com>
Diff between resemble versions 2.2.1 dated 2022-08-31 and 2.2.2 dated 2023-04-20
DESCRIPTION | 9 MD5 | 137 +++---- NEWS.md | 14 R/AAA.R | 17 R/RcppExports.R | 60 ++- R/cor_diss.R | 12 R/dissimilarity.R | 41 +- R/f_diss.R | 4 R/local_fit.R | 86 ++-- R/local_helpers.R | 113 +++--- R/mbl.R | 506 +++++++++++++++++---------- R/mbl_control.R | 2 R/ortho_diss.R | 8 R/ortho_diss_helpers.R | 2 R/ortho_projection.R | 105 ++--- R/ortho_projection_helpers.R | 4 R/pkg_info.R |only R/plot.mbl.R | 17 R/plot.ortho_projection.R | 20 - R/print.mbl.R | 12 R/print.ortho_projection.R | 8 R/resemble.R | 8 R/sample_stratified.R | 192 +++++----- R/search_neighbors.R | 94 +++-- R/search_neighbors_helpers.R | 74 ++- R/sid.R | 2 R/sim_eval.R | 6 README.md | 653 +++++++++++++++++++---------------- build/resemble.pdf |binary build/vignette.rds |binary inst/CITATION | 40 +- inst/doc/resemble.html | 308 +++++++--------- man/diss_to_neighbors.Rd | 8 man/dissimilarity.Rd | 175 ++++----- man/f_diss.Rd | 8 man/fast_diss.Rd | 52 +- man/gaussian_process.Rd | 2 man/gaussian_process_cv.Rd | 16 man/get_local_pls_weights.Rd | 2 man/get_weights.Rd | 14 man/ith_mbl_neighbor.Rd | 22 - man/local_fit.Rd | 84 ++-- man/mbl.Rd | 320 ++++++++--------- man/mbl_control.Rd | 62 +-- man/opls.Rd | 12 man/opls_cv_cpp.Rd | 44 +- man/opls_for_projection.Rd | 48 +- man/opls_get_all.Rd | 12 man/opls_get_basics.Rd | 12 man/opls_gs.Rd |only man/ortho_diss.Rd | 97 ++--- man/ortho_projection.Rd | 181 ++++----- man/pca_nipals.Rd | 106 ++--- man/pkg_info.Rd |only man/predict_gaussian_process.Rd | 70 +-- man/predict_opls.Rd | 2 man/project_opls.Rd | 64 +-- man/reconstruction_error.Rd | 11 man/resemble-package.Rd | 53 +- man/search_neighbors.Rd | 223 +++++------ man/sid.Rd | 32 - man/sim_eval.Rd | 22 - man/which_min_vector.Rd | 54 +- src/Makevars | 1 src/Makevars.win | 1 src/RcppExports.cpp | 30 + src/regression_methods.cpp | 381 +++++++++++++++----- tests/testthat/test-dissimilarity.R | 22 - tests/testthat/test-mbl.R | 55 +- tests/testthat/test-pc_projection.R | 107 +++-- tests/testthat/test-pls_projection.R | 154 ++++---- 71 files changed, 2873 insertions(+), 2240 deletions(-)
Title: Comprehensive Analysis of Nucleotide Conversion Sequencing Data
Description: Nucleotide conversion sequencing experiments have been
developed to add a temporal dimension to RNA-seq and single-cell RNA-seq. Such
experiments require specialized tools for primary processing such as GRAND-SLAM,
(see 'Jürges et al' <doi:10.1093/bioinformatics/bty256>) and specialized tools for
downstream analyses. 'grandR' provides a comprehensive toolbox for quality control,
kinetic modeling, differential gene expression analysis and visualization of such data.
Author: Florian Erhard [aut, cre] ,
Teresa Rummel [ctb],
Lygeri Sakellaridi [ctb]
Maintainer: Florian Erhard <Florian.Erhard@uni-wuerzburg.de>
Diff between grandR versions 0.2.1 dated 2023-02-27 and 0.2.2 dated 2023-04-20
DESCRIPTION | 8 - MD5 | 43 +++++---- NAMESPACE | 10 ++ NEWS.md | 12 ++ R/diffexp.R | 5 - R/dropout.R | 133 ++++++++++++++++++++++++----- R/grandR.R | 48 +++++++--- R/load.R | 81 +++++++++++------ R/modeling.R | 159 +++++++++++++++++++++++++++++++---- R/paramest.R | 49 ++++++---- R/readsimulator.R | 116 +++++++++++++++++++++++++ R/utils.R | 12 +- README.md | 1 inst/doc/getting-started.html | 4 man/AnalyzeGeneSets.Rd | 3 man/ComputeNonConstantParam.Rd |only man/ComputeSummaryStatistics.Rd |only man/SimulateKinetics.Rd | 10 +- man/SimulateReadsForSample.Rd | 3 man/SimulateTimeCourseNonConstant.Rd |only man/ToIndex.Rd | 4 man/correctdropout.Rd |only man/dropout.Rd | 5 - man/dropoutpercent.Rd |only man/f.nonconst.Rd |only man/f.nonconst.linear.Rd |only 26 files changed, 570 insertions(+), 136 deletions(-)
Title: A Shiny App for Design of Experiments in Life Sciences
Description: A shiny design of experiments (DOE) app that aids in the creation of traditional,
un-replicated, augmented and partially-replicated designs applied to agriculture,
plant breeding, forestry, animal and biological sciences.
Author: Didier Murillo [cre, aut],
Salvador Gezan [aut],
Ana Heilman [ctb],
Thomas Walk [ctb],
Johan Aparicio [ctb],
Matthew Seefeldt [ctb],
Jean-Marc Montpetit [ctb],
Richard Horsley [ctb],
North Dakota State University [cph]
Maintainer: Didier Murillo <didier.murilloflorez@ndsu.edu>
Diff between FielDHub versions 1.2.1 dated 2022-09-20 and 1.3.1 dated 2023-04-20
FielDHub-1.2.1/FielDHub/R/utils_NO_Random.R |only FielDHub-1.2.1/FielDHub/R/utils_ZST.R |only FielDHub-1.2.1/FielDHub/R/utils_concurrence_matrix.R |only FielDHub-1.2.1/FielDHub/R/utils_get_levels.R |only FielDHub-1.2.1/FielDHub/R/utils_lsq.R |only FielDHub-1.2.1/FielDHub/R/utils_norm_trunc.R |only FielDHub-1.2.1/FielDHub/R/utils_order_ls.R |only FielDHub-1.2.1/FielDHub/R/utils_paste_by_col.R |only FielDHub-1.2.1/FielDHub/R/utils_paste_by_row.R |only FielDHub-1.2.1/FielDHub/R/utils_planter_transform.R |only FielDHub-1.2.1/FielDHub/R/utils_plot_CRD.R |only FielDHub-1.2.1/FielDHub/R/utils_plot_iblocks.R |only FielDHub-1.2.1/FielDHub/R/utils_plot_number.R |only FielDHub-1.2.1/FielDHub/R/utils_plot_number_splits.R |only FielDHub-1.2.1/FielDHub/R/utils_random_checks.R |only FielDHub-1.2.1/FielDHub/R/utils_scrolY.R |only FielDHub-1.2.1/FielDHub/R/utils_seriePlot_numbers.R |only FielDHub-1.2.1/FielDHub/R/utils_serpentinelayout.R |only FielDHub-1.2.1/FielDHub/R/utils_set_augmented_blocks.R |only FielDHub-1.2.1/FielDHub/R/utils_split_vectors.R |only FielDHub-1.2.1/FielDHub/R/utils_theme_flatly.R |only FielDHub-1.2.1/FielDHub/inst/doc/crd.R |only FielDHub-1.2.1/FielDHub/inst/doc/crd.Rmd |only FielDHub-1.2.1/FielDHub/inst/doc/crd.html |only FielDHub-1.2.1/FielDHub/inst/doc/latin_square.R |only FielDHub-1.2.1/FielDHub/inst/doc/latin_square.Rmd |only FielDHub-1.2.1/FielDHub/inst/doc/latin_square.html |only FielDHub-1.2.1/FielDHub/inst/doc/methods.R |only FielDHub-1.2.1/FielDHub/inst/doc/methods.Rmd |only FielDHub-1.2.1/FielDHub/inst/doc/methods.html |only FielDHub-1.2.1/FielDHub/inst/doc/strip_plot.R |only FielDHub-1.2.1/FielDHub/inst/doc/strip_plot.Rmd |only FielDHub-1.2.1/FielDHub/inst/doc/strip_plot.html |only FielDHub-1.2.1/FielDHub/man/figures/DExample.PNG |only FielDHub-1.2.1/FielDHub/man/figures/multiple_expts.png |only FielDHub-1.2.1/FielDHub/man/figures/pREPExample.PNG |only FielDHub-1.2.1/FielDHub/vignettes/crd.Rmd |only FielDHub-1.2.1/FielDHub/vignettes/latin_square.Rmd |only FielDHub-1.2.1/FielDHub/vignettes/methods.Rmd |only FielDHub-1.2.1/FielDHub/vignettes/strip_plot.Rmd |only FielDHub-1.3.1/FielDHub/DESCRIPTION | 78 FielDHub-1.3.1/FielDHub/LICENSE | 4 FielDHub-1.3.1/FielDHub/MD5 | 418 - FielDHub-1.3.1/FielDHub/NAMESPACE | 118 FielDHub-1.3.1/FielDHub/NEWS.md | 361 - FielDHub-1.3.1/FielDHub/R/app_config.R | 68 FielDHub-1.3.1/FielDHub/R/app_server.R | 94 FielDHub-1.3.1/FielDHub/R/app_ui.R | 260 FielDHub-1.3.1/FielDHub/R/fct_CRD.R | 280 - FielDHub-1.3.1/FielDHub/R/fct_RCBD.R | 458 - FielDHub-1.3.1/FielDHub/R/fct_RCDB_augmented.R | 882 +-- FielDHub-1.3.1/FielDHub/R/fct_alpha_lattice.R | 302 - FielDHub-1.3.1/FielDHub/R/fct_diagonal_arrangement.R | 1540 +++-- FielDHub-1.3.1/FielDHub/R/fct_do_optim.R |only FielDHub-1.3.1/FielDHub/R/fct_full_factorial.R | 392 - FielDHub-1.3.1/FielDHub/R/fct_incomplete_blocks.R | 386 - FielDHub-1.3.1/FielDHub/R/fct_latin_square.R | 445 - FielDHub-1.3.1/FielDHub/R/fct_optimized_arrangement.R | 730 +- FielDHub-1.3.1/FielDHub/R/fct_partially_replicated.R | 724 +- FielDHub-1.3.1/FielDHub/R/fct_rectangular_lattice.R | 264 FielDHub-1.3.1/FielDHub/R/fct_row_column.R | 386 - FielDHub-1.3.1/FielDHub/R/fct_split_families.R | 228 FielDHub-1.3.1/FielDHub/R/fct_split_plot.R | 452 - FielDHub-1.3.1/FielDHub/R/fct_split_split_plot.R | 510 - FielDHub-1.3.1/FielDHub/R/fct_square_lattice.R | 256 FielDHub-1.3.1/FielDHub/R/fct_strip_plot.R | 422 - FielDHub-1.3.1/FielDHub/R/globals.R | 48 FielDHub-1.3.1/FielDHub/R/golem_utils_server.R | 128 FielDHub-1.3.1/FielDHub/R/golem_utils_ui.R | 664 +- FielDHub-1.3.1/FielDHub/R/mod_Alpha_Lattice.R | 1224 ++-- FielDHub-1.3.1/FielDHub/R/mod_CRD.R | 1052 +-- FielDHub-1.3.1/FielDHub/R/mod_Diagonal.R | 2137 +++---- FielDHub-1.3.1/FielDHub/R/mod_FD.R | 1217 ++-- FielDHub-1.3.1/FielDHub/R/mod_IBD.R | 1328 ++-- FielDHub-1.3.1/FielDHub/R/mod_LSD.R | 1220 ++-- FielDHub-1.3.1/FielDHub/R/mod_Optim.R | 1577 ++--- FielDHub-1.3.1/FielDHub/R/mod_RCBD.R | 1240 ++-- FielDHub-1.3.1/FielDHub/R/mod_RCBD_augmented.R | 1812 +++--- FielDHub-1.3.1/FielDHub/R/mod_Rectangular_Lattice.R | 1232 ++-- FielDHub-1.3.1/FielDHub/R/mod_RowCol.R | 1312 ++-- FielDHub-1.3.1/FielDHub/R/mod_SPD.R | 1184 ++-- FielDHub-1.3.1/FielDHub/R/mod_SSPD.R | 1259 ++-- FielDHub-1.3.1/FielDHub/R/mod_STRIPD.R | 1242 ++-- FielDHub-1.3.1/FielDHub/R/mod_Square_Lattice.R | 1242 ++-- FielDHub-1.3.1/FielDHub/R/mod_diagonal_multiple.R | 2739 +++++----- FielDHub-1.3.1/FielDHub/R/mod_multi_loc_prep.R |only FielDHub-1.3.1/FielDHub/R/mod_pREPS.R | 1523 ++--- FielDHub-1.3.1/FielDHub/R/mod_sparse_allocation.R |only FielDHub-1.3.1/FielDHub/R/run_app.R | 46 FielDHub-1.3.1/FielDHub/R/utils-pipe.R | 32 FielDHub-1.3.1/FielDHub/R/utils_AR1xAR1_simulation.R | 194 FielDHub-1.3.1/FielDHub/R/utils_ARCBD_name.R | 60 FielDHub-1.3.1/FielDHub/R/utils_ARCBD_plot_number.R | 90 FielDHub-1.3.1/FielDHub/R/utils_S3_methods.R | 1362 ++-- FielDHub-1.3.1/FielDHub/R/utils_automatically_cuts.R | 182 FielDHub-1.3.1/FielDHub/R/utils_available_percent.R | 697 +- FielDHub-1.3.1/FielDHub/R/utils_check_input.R | 142 FielDHub-1.3.1/FielDHub/R/utils_continue_plot_Cart.R | 14 FielDHub-1.3.1/FielDHub/R/utils_continue_plot_Serp.R | 22 FielDHub-1.3.1/FielDHub/R/utils_diagonals_checks.R | 144 FielDHub-1.3.1/FielDHub/R/utils_export_design.R | 257 FielDHub-1.3.1/FielDHub/R/utils_export_layout.R | 112 FielDHub-1.3.1/FielDHub/R/utils_factor_subsets.R | 236 FielDHub-1.3.1/FielDHub/R/utils_get_DBrandom.R | 172 FielDHub-1.3.1/FielDHub/R/utils_get_random.R | 560 +- FielDHub-1.3.1/FielDHub/R/utils_get_random_stacked.R | 128 FielDHub-1.3.1/FielDHub/R/utils_get_single_random.R | 49 FielDHub-1.3.1/FielDHub/R/utils_ibd_plot_numbers.R | 138 FielDHub-1.3.1/FielDHub/R/utils_infoPrint.R | 30 FielDHub-1.3.1/FielDHub/R/utils_load_file.R | 48 FielDHub-1.3.1/FielDHub/R/utils_names_layout.R | 899 ++- FielDHub-1.3.1/FielDHub/R/utils_pREP.R | 408 - FielDHub-1.3.1/FielDHub/R/utils_plot_RCBD.R | 458 - FielDHub-1.3.1/FielDHub/R/utils_plot_diagonal_arrangement.R | 281 - FielDHub-1.3.1/FielDHub/R/utils_plot_iblocks_1.R | 1073 ++- FielDHub-1.3.1/FielDHub/R/utils_plot_latinSQ.R | 486 - FielDHub-1.3.1/FielDHub/R/utils_plot_layout.R | 469 - FielDHub-1.3.1/FielDHub/R/utils_plot_splitPlots.R | 806 +- FielDHub-1.3.1/FielDHub/R/utils_swap_functions.R |only FielDHub-1.3.1/FielDHub/README.md | 568 +- FielDHub-1.3.1/FielDHub/build/vignette.rds |binary FielDHub-1.3.1/FielDHub/inst/WORDLIST | 113 FielDHub-1.3.1/FielDHub/inst/app/www/DidierMurillo.jpg |binary FielDHub-1.3.1/FielDHub/inst/app/www/Help.html | 293 - FielDHub-1.3.1/FielDHub/inst/app/www/aboutUs.html | 152 FielDHub-1.3.1/FielDHub/inst/app/www/ana.jpg |binary FielDHub-1.3.1/FielDHub/inst/app/www/baner46.jpg |binary FielDHub-1.3.1/FielDHub/inst/app/www/corner.js | 6 FielDHub-1.3.1/FielDHub/inst/app/www/favicon.ico |binary FielDHub-1.3.1/FielDHub/inst/app/www/home.html | 124 FielDHub-1.3.1/FielDHub/inst/app/www/johan.jpg |binary FielDHub-1.3.1/FielDHub/inst/app/www/matthew.jpg |binary FielDHub-1.3.1/FielDHub/inst/app/www/mobile.css | 58 FielDHub-1.3.1/FielDHub/inst/app/www/richard.jpg |binary FielDHub-1.3.1/FielDHub/inst/app/www/shinybusy.js | 30 FielDHub-1.3.1/FielDHub/inst/app/www/style.css | 655 +- FielDHub-1.3.1/FielDHub/inst/doc/RCBD_augmented.R | 128 FielDHub-1.3.1/FielDHub/inst/doc/RCBD_augmented.Rmd | 453 - FielDHub-1.3.1/FielDHub/inst/doc/RCBD_augmented.html | 1533 ++--- FielDHub-1.3.1/FielDHub/inst/doc/alpha_lattice.R | 110 FielDHub-1.3.1/FielDHub/inst/doc/alpha_lattice.Rmd | 341 - FielDHub-1.3.1/FielDHub/inst/doc/alpha_lattice.html | 1245 ++-- FielDHub-1.3.1/FielDHub/inst/doc/diagonal_arrangement.R | 196 FielDHub-1.3.1/FielDHub/inst/doc/diagonal_arrangement.Rmd | 761 +- FielDHub-1.3.1/FielDHub/inst/doc/diagonal_arrangement.html | 2069 +++---- FielDHub-1.3.1/FielDHub/inst/doc/full_factorial.R | 112 FielDHub-1.3.1/FielDHub/inst/doc/full_factorial.Rmd | 333 - FielDHub-1.3.1/FielDHub/inst/doc/full_factorial.html | 1219 ++-- FielDHub-1.3.1/FielDHub/inst/doc/incomplete_blocks.R | 108 FielDHub-1.3.1/FielDHub/inst/doc/incomplete_blocks.Rmd | 335 - FielDHub-1.3.1/FielDHub/inst/doc/incomplete_blocks.html | 1235 ++-- FielDHub-1.3.1/FielDHub/inst/doc/multi_location_prep.R |only FielDHub-1.3.1/FielDHub/inst/doc/multi_location_prep.Rmd |only FielDHub-1.3.1/FielDHub/inst/doc/multi_location_prep.html |only FielDHub-1.3.1/FielDHub/inst/doc/optimized_arrangement.R | 124 FielDHub-1.3.1/FielDHub/inst/doc/optimized_arrangement.Rmd | 445 - FielDHub-1.3.1/FielDHub/inst/doc/optimized_arrangement.html | 1513 ++--- FielDHub-1.3.1/FielDHub/inst/doc/partially_replicated.R | 141 FielDHub-1.3.1/FielDHub/inst/doc/partially_replicated.Rmd | 506 + FielDHub-1.3.1/FielDHub/inst/doc/partially_replicated.html | 1584 +++-- FielDHub-1.3.1/FielDHub/inst/doc/rcbd.R | 106 FielDHub-1.3.1/FielDHub/inst/doc/rcbd.Rmd | 317 - FielDHub-1.3.1/FielDHub/inst/doc/rcbd.html | 1209 ++-- FielDHub-1.3.1/FielDHub/inst/doc/rectangular_lattice.R | 98 FielDHub-1.3.1/FielDHub/inst/doc/rectangular_lattice.Rmd | 311 - FielDHub-1.3.1/FielDHub/inst/doc/rectangular_lattice.html | 1281 ++-- FielDHub-1.3.1/FielDHub/inst/doc/row_column.R | 96 FielDHub-1.3.1/FielDHub/inst/doc/row_column.Rmd | 315 - FielDHub-1.3.1/FielDHub/inst/doc/row_column.html | 1285 ++-- FielDHub-1.3.1/FielDHub/inst/doc/sparse_allocation.R |only FielDHub-1.3.1/FielDHub/inst/doc/sparse_allocation.Rmd |only FielDHub-1.3.1/FielDHub/inst/doc/sparse_allocation.html |only FielDHub-1.3.1/FielDHub/inst/doc/split_plot.R | 112 FielDHub-1.3.1/FielDHub/inst/doc/split_plot.Rmd | 337 - FielDHub-1.3.1/FielDHub/inst/doc/split_plot.html | 1203 ++-- FielDHub-1.3.1/FielDHub/inst/doc/split_split_plot.R | 116 FielDHub-1.3.1/FielDHub/inst/doc/split_split_plot.Rmd | 345 - FielDHub-1.3.1/FielDHub/inst/doc/split_split_plot.html | 1236 ++-- FielDHub-1.3.1/FielDHub/inst/doc/square_lattice.R | 96 FielDHub-1.3.1/FielDHub/inst/doc/square_lattice.Rmd | 319 - FielDHub-1.3.1/FielDHub/inst/doc/square_lattice.html | 1291 ++-- FielDHub-1.3.1/FielDHub/inst/golem-config.yml | 16 FielDHub-1.3.1/FielDHub/man/CRD.Rd | 176 FielDHub-1.3.1/FielDHub/man/RCBD.Rd | 186 FielDHub-1.3.1/FielDHub/man/RCBD_augmented.Rd | 226 FielDHub-1.3.1/FielDHub/man/alpha_lattice.Rd | 176 FielDHub-1.3.1/FielDHub/man/diagonal_arrangement.Rd | 306 - FielDHub-1.3.1/FielDHub/man/do_optim.Rd |only FielDHub-1.3.1/FielDHub/man/figures/DExample.jpg |only FielDHub-1.3.1/FielDHub/man/figures/README-unnamed-chunk-5-1.png |binary FielDHub-1.3.1/FielDHub/man/figures/README-unnamed-chunk-9-1.png |binary FielDHub-1.3.1/FielDHub/man/figures/multiple_expts.jpg |only FielDHub-1.3.1/FielDHub/man/figures/prep_shiny.jpg |only FielDHub-1.3.1/FielDHub/man/full_factorial.Rd | 204 FielDHub-1.3.1/FielDHub/man/incomplete_blocks.Rd | 164 FielDHub-1.3.1/FielDHub/man/latin_square.Rd | 170 FielDHub-1.3.1/FielDHub/man/multi_location_prep.Rd |only FielDHub-1.3.1/FielDHub/man/optimized_arrangement.Rd | 252 FielDHub-1.3.1/FielDHub/man/partially_replicated.Rd | 255 FielDHub-1.3.1/FielDHub/man/pipe.Rd | 40 FielDHub-1.3.1/FielDHub/man/plot.FielDHub.Rd | 80 FielDHub-1.3.1/FielDHub/man/print.FielDHub.Rd | 74 FielDHub-1.3.1/FielDHub/man/print.fieldLayout.Rd | 44 FielDHub-1.3.1/FielDHub/man/print.summary.FielDHub.Rd | 50 FielDHub-1.3.1/FielDHub/man/rectangular_lattice.Rd | 164 FielDHub-1.3.1/FielDHub/man/row_column.Rd | 180 FielDHub-1.3.1/FielDHub/man/run_app.Rd | 34 FielDHub-1.3.1/FielDHub/man/sparse_allocation.Rd |only FielDHub-1.3.1/FielDHub/man/split_families.Rd | 106 FielDHub-1.3.1/FielDHub/man/split_plot.Rd | 192 FielDHub-1.3.1/FielDHub/man/split_split_plot.Rd | 198 FielDHub-1.3.1/FielDHub/man/square_lattice.Rd | 164 FielDHub-1.3.1/FielDHub/man/strip_plot.Rd | 210 FielDHub-1.3.1/FielDHub/man/summary.FielDHub.Rd | 66 FielDHub-1.3.1/FielDHub/man/swap_pairs.Rd |only FielDHub-1.3.1/FielDHub/tests/spelling.R | 6 FielDHub-1.3.1/FielDHub/tests/testthat.R | 8 FielDHub-1.3.1/FielDHub/tests/testthat/test-golem-recommended.R | 52 FielDHub-1.3.1/FielDHub/tests/testthat/test_swap_functions.R |only FielDHub-1.3.1/FielDHub/tests/testthat/test_utils.R | 160 FielDHub-1.3.1/FielDHub/vignettes/RCBD_augmented.Rmd | 453 - FielDHub-1.3.1/FielDHub/vignettes/alpha_lattice.Rmd | 341 - FielDHub-1.3.1/FielDHub/vignettes/diagonal_arrangement.Rmd | 761 +- FielDHub-1.3.1/FielDHub/vignettes/fieldhub-0-1-0.md | 28 FielDHub-1.3.1/FielDHub/vignettes/fieldhub-1-2-0.md | 64 FielDHub-1.3.1/FielDHub/vignettes/full_factorial.Rmd | 333 - FielDHub-1.3.1/FielDHub/vignettes/incomplete_blocks.Rmd | 335 - FielDHub-1.3.1/FielDHub/vignettes/multi_location_prep.Rmd |only FielDHub-1.3.1/FielDHub/vignettes/news/fieldhub-0-1-0.Rmd | 120 FielDHub-1.3.1/FielDHub/vignettes/news/fieldhub-1-2-0.Rmd | 208 FielDHub-1.3.1/FielDHub/vignettes/news/fieldhub-1-3-1.Rmd |only FielDHub-1.3.1/FielDHub/vignettes/optimized_arrangement.Rmd | 445 - FielDHub-1.3.1/FielDHub/vignettes/partially_replicated.Rmd | 506 + FielDHub-1.3.1/FielDHub/vignettes/rcbd.Rmd | 317 - FielDHub-1.3.1/FielDHub/vignettes/rectangular_lattice.Rmd | 311 - FielDHub-1.3.1/FielDHub/vignettes/references.bib |only FielDHub-1.3.1/FielDHub/vignettes/row_column.Rmd | 315 - FielDHub-1.3.1/FielDHub/vignettes/sparse_allocation.Rmd |only FielDHub-1.3.1/FielDHub/vignettes/split_plot.Rmd | 337 - FielDHub-1.3.1/FielDHub/vignettes/split_split_plot.Rmd | 345 - FielDHub-1.3.1/FielDHub/vignettes/square_lattice.Rmd | 319 - 241 files changed, 41988 insertions(+), 39105 deletions(-)
Title: R Optimization Infrastructure
Description: The R Optimization Infrastructure ('ROI') <doi:10.18637/jss.v094.i15>
is a sophisticated framework for handling optimization problems in R.
Additional information can be found on the 'ROI' homepage <https://roi.r-forge.r-project.org/>.
Author: Kurt Hornik [aut] ,
David Meyer [aut],
Florian Schwendinger [aut] ,
Stefan Theussl [aut, cre] ,
Diethelm Wuertz [ctb]
Maintainer: Stefan Theussl <Stefan.Theussl@R-Project.org>
Diff between ROI versions 1.0-0 dated 2020-08-31 and 1.0-1 dated 2023-04-20
DESCRIPTION | 27 +++++++++++++------------ MD5 | 23 +++++++++++---------- NAMESPACE | 3 ++ R/OP.R | 5 ++++ R/constraints.R | 2 - R/doc_data.R | 41 +++++++++++++++++++------------------- R/plugin.R | 36 ++++++++++++++++++++++++--------- R/roi.R | 49 ++++++++++++++++++++++++++++++++++++++++++++++ inst/CITATION | 12 ++++++----- man/OP.Rd | 5 ++++ man/ROI_require_solver.Rd |only man/ROI_solve.Rd | 5 ++++ man/US30.Rd | 11 ++++++---- 13 files changed, 155 insertions(+), 64 deletions(-)
Title: Basic and Advanced Statistical Power Analysis
Description: This is a collection of tools for conducting both basic and advanced statistical power analysis including correlation, proportion, t-test, one-way ANOVA, two-way ANOVA, linear regression, logistic regression, Poisson regression, mediation analysis, longitudinal data analysis, structural equation modeling and multilevel modeling. It also serves as the engine for conducting power analysis online at <https://webpower.psychstat.org>.
Author: Zhiyong Zhang [aut, cre],
Yujiao Mai [aut],
Miao Yang [ctb],
Ziqian Xu [ctb],
Conor McNamara [ctb]
Maintainer: Zhiyong Zhang <johnnyzhz@gmail.com>
Diff between WebPower versions 0.8.7 dated 2023-01-12 and 0.9.0 dated 2023-04-20
DESCRIPTION | 19 ++++++++++++------- MD5 | 18 ++++++++++++++---- NAMESPACE | 6 ++++++ R/model14.R |only R/model15.R |only R/model58.R |only R/model7.R |only R/model8.R |only R/webpower.R | 19 +++++++++++-------- man/wp.modmed.m14.Rd |only man/wp.modmed.m15.Rd |only man/wp.modmed.m58.Rd |only man/wp.modmed.m7.Rd |only man/wp.modmed.m8.Rd |only man/wp.mrt2arm.Rd | 6 +++--- 15 files changed, 46 insertions(+), 22 deletions(-)
Title: Variable Selection Methods Including an Exposure Variable
Description: Utilizes multiple variable selection methods to estimate Average Treatment Effect.
Author: Alex Martinez [aut, cre],
Andrew Chapple [aut]
Maintainer: Alex Martinez <ahmartinez283@gmail.com>
Diff between VARSELECTEXPOSURE versions 1.0.1 dated 2022-08-22 and 1.0.2 dated 2023-04-20
DESCRIPTION | 10 - MD5 | 21 +- NAMESPACE | 1 R/BACKWARD_EXPOSURE.R | 79 ++++++++--- R/FORWARD_EXPOSURE.R | 79 ++++++++--- R/RcppExports.R | 33 ++++ R/STEPWISE_EXPOSURE.R | 100 ++++++++++---- man/LIKE.Rd | 4 man/MCMC_LOGIT_KEEP.Rd |only man/STEPWISE_EXPOSURE.Rd | 3 src/RcppExports.cpp | 56 +++++++ src/VARSELECTEXPOSURE.cpp | 324 +++++++++++++++++++++++++++++++++++++++++++++- 12 files changed, 618 insertions(+), 92 deletions(-)
More information about VARSELECTEXPOSURE at CRAN
Permanent link
Title: Utilities from 'Seminar fuer Statistik' ETH Zurich
Description: Useful utilities ['goodies'] from Seminar fuer Statistik ETH Zurich,
some of which were ported from S-plus in the 1990s.
For graphics, have pretty (Log-scale) axes eaxis(), an enhanced Tukey-Anscombe
plot, combining histogram and boxplot, 2d-residual plots, a 'tachoPlot()',
pretty arrows, etc.
For robustness, have a robust F test and robust range().
For system support, notably on Linux, provides 'Sys.*()' functions with
more access to system and CPU information.
Finally, miscellaneous utilities such as simple efficient prime numbers,
integer codes, Duplicated(), toLatex.numeric() and is.whole().
Author: Martin Maechler [aut, cre] ,
Werner Stahel [ctb] , f.robftest, last,
p.scales, p.dnorm),
Andreas Ruckstuhl [ctb] , p.profileTraces,
p.res.2x),
Christian Keller [ctb] , p.tachoPlot),
Kjetil Halvorsen [ctb] , ecdf.ksCI),
Alain Hauser [ctb] , is.whole,
[...truncated...]
Maintainer: Martin Maechler <maechler@stat.math.ethz.ch>
Diff between sfsmisc versions 1.1-14 dated 2022-11-24 and 1.1-15 dated 2023-04-20
sfsmisc-1.1-14/sfsmisc/R/plotCI.R |only sfsmisc-1.1-15/sfsmisc/DESCRIPTION | 26 +++--- sfsmisc-1.1-15/sfsmisc/MD5 | 51 ++++++------ sfsmisc-1.1-15/sfsmisc/NAMESPACE | 1 sfsmisc-1.1-15/sfsmisc/R/mat2tex.R | 2 sfsmisc-1.1-15/sfsmisc/R/misc-goodies.R | 10 +- sfsmisc-1.1-15/sfsmisc/R/nearcor.R | 2 sfsmisc-1.1-15/sfsmisc/R/p.goodies.R | 4 - sfsmisc-1.1-15/sfsmisc/R/prime-numbers-fn.R | 2 sfsmisc-1.1-15/sfsmisc/R/ps.goodies.R | 2 sfsmisc-1.1-15/sfsmisc/R/u.goodies.R | 9 ++ sfsmisc-1.1-15/sfsmisc/R/unix/Sys.ps.R | 2 sfsmisc-1.1-15/sfsmisc/TODO | 5 - sfsmisc-1.1-15/sfsmisc/build |only sfsmisc-1.1-15/sfsmisc/inst/NEWS.Rd | 11 ++ sfsmisc-1.1-15/sfsmisc/man/AsciiToInt.Rd | 7 - sfsmisc-1.1-15/sfsmisc/man/errbar.Rd | 4 - sfsmisc-1.1-15/sfsmisc/man/histBxp.Rd | 3 sfsmisc-1.1-15/sfsmisc/man/last.Rd | 3 sfsmisc-1.1-15/sfsmisc/man/list_named.Rd |only sfsmisc-1.1-15/sfsmisc/man/nearcor.Rd | 9 +- sfsmisc-1.1-15/sfsmisc/man/p.profileTraces.Rd | 3 sfsmisc-1.1-15/sfsmisc/man/plotStep.Rd | 5 - sfsmisc-1.1-15/sfsmisc/man/printTable2.Rd | 5 - sfsmisc-1.1-15/sfsmisc/man/rot2.Rd | 4 - sfsmisc-1.1-15/sfsmisc/man/u.log.Rd | 104 +++++++++++++++++++++++++- sfsmisc-1.1-15/sfsmisc/tests/posdef.R | 4 - sfsmisc-1.1-15/sfsmisc/tests/posdef.Rout.save | 12 +-- 28 files changed, 204 insertions(+), 86 deletions(-)
Title: Helper Functions for 'Interactive Tree Of Life'
Description: The 'Interactive Tree Of Life' <https://itol.embl.de/> online server can
edit and annotate trees interactively. The 'itol.toolkit' package can
support all types of annotation templates.
Author: Tong Zhou [aut, cre]
Maintainer: Tong Zhou <tongzhou2017@gmail.com>
Diff between itol.toolkit versions 1.1.0 dated 2023-02-12 and 1.1.5 dated 2023-04-20
itol.toolkit-1.1.0/itol.toolkit/man/figures |only itol.toolkit-1.1.0/itol.toolkit/vignettes/images |only itol.toolkit-1.1.5/itol.toolkit/DESCRIPTION | 6 itol.toolkit-1.1.5/itol.toolkit/MD5 | 46 +- itol.toolkit-1.1.5/itol.toolkit/NAMESPACE | 2 itol.toolkit-1.1.5/itol.toolkit/R/object.R | 18 itol.toolkit-1.1.5/itol.toolkit/R/output.R | 10 itol.toolkit-1.1.5/itol.toolkit/R/user.R | 48 ++ itol.toolkit-1.1.5/itol.toolkit/README.md | 103 +++++ itol.toolkit-1.1.5/itol.toolkit/data/inbuilt_themes.rda |binary itol.toolkit-1.1.5/itol.toolkit/inst/doc/Get_Start.R | 292 ++++++++-------- itol.toolkit-1.1.5/itol.toolkit/inst/doc/Get_Start.Rmd | 53 ++ itol.toolkit-1.1.5/itol.toolkit/inst/doc/Get_Start.html | 57 ++- itol.toolkit-1.1.5/itol.toolkit/inst/extdata/dataset1 |only itol.toolkit-1.1.5/itol.toolkit/inst/extdata/dataset2 |only itol.toolkit-1.1.5/itol.toolkit/inst/extdata/dataset3 |only itol.toolkit-1.1.5/itol.toolkit/inst/extdata/dataset4 |only itol.toolkit-1.1.5/itol.toolkit/man/create_unit.Rd | 3 itol.toolkit-1.1.5/itol.toolkit/man/write_hub.Rd | 2 itol.toolkit-1.1.5/itol.toolkit/man/write_unit.Rd | 2 itol.toolkit-1.1.5/itol.toolkit/vignettes/Get_Start.Rmd | 53 ++ 21 files changed, 475 insertions(+), 220 deletions(-)
Title: Proteomics Data Analysis Functions
Description: Data analysis of proteomics experiments by mass spectrometry is supported by this collection of functions mostly dedicated to the analysis of (bottom-up) quantitative (XIC) data.
Fasta-formatted proteomes (eg from UniProt Consortium <doi:10.1093/nar/gky1049>) can be read with automatic parsing and multiple annotation types (like species origin, abbreviated gene names, etc) extracted.
Initial results from multiple software for protein (and peptide) quantitation can be imported (to a common format):
MaxQuant (Tyanova et al 2016 <doi:10.1038/nprot.2016.136>), Dia-NN (Demichev et al 2020 <doi:10.1038/s41592-019-0638-x>),
Fragpipe(da Veiga et al 2020, <doi:10.1038/s41592-020-0912-y>), MassChroq (Valot et al 2011] <doi:10.1002/pmic.201100120>),
OpenMS (<doi:10.1038/nmeth.3959>), ProteomeDiscoverer and Proline (Bouyssie et al 2020 <doi:10.1093/bioinformatics/btaa118>).
Meta-data provided by initial analysis software and/or in sdrf format can be integr [...truncated...]
Author: Wolfgang Raffelsberger [aut, cre]
Maintainer: Wolfgang Raffelsberger <w.raffelsberger@gmail.com>
Diff between wrProteo versions 1.8.0 dated 2023-03-23 and 1.9.0 dated 2023-04-20
DESCRIPTION | 11 MD5 | 78 + NAMESPACE | 3 R/extractTestingResults.R | 2 R/foldChangeArrow2.R | 2 R/matrixNAneighbourImpute.R | 48 - R/readDiaNNFile.R |only R/readDiaNNPeptides.R |only R/readFragpipeFile.R | 39 R/readMaxQuantFile.R | 2 R/readProtDiscovFile.R | 384 --------- R/readProtDiscovPeptides.R | 126 ++- R/readProteomeDiscovererFile.R |only R/readSampleMetaData.R | 68 + R/readSdrf.R | 6 R/removeSampleInList.R | 98 +- R/testRobustToNAimputation.R | 19 build/partial.rdb |only inst/doc/wrProteoVignette1.R | 11 inst/doc/wrProteoVignette1.Rmd | 49 - inst/doc/wrProteoVignette1.html | 617 +++++++------- inst/doc/wrProteoVignetteUPS1.R | 11 inst/doc/wrProteoVignetteUPS1.Rmd | 19 inst/doc/wrProteoVignetteUPS1.html | 1525 ++++++++++++++++++------------------- inst/extdata/tinyDiaNN1.tsv.gz |only man/dot-checkSetupGroups.Rd | 2 man/dot-commonSpecies.Rd | 2 man/dot-extrSpecPref.Rd | 2 man/dot-plotQuantDistr.Rd | 11 man/extractTestingResults.Rd | 2 man/matrixNAneighbourImpute.Rd | 13 man/readDiaNNFile.Rd |only man/readDiaNNPeptides.Rd |only man/readFragpipeFile.Rd | 6 man/readMaxQuantFile.Rd | 2 man/readProtDiscovFile.Rd | 9 man/readProtDiscovPeptides.Rd | 2 man/readProteomeDiscovererFile.Rd |only man/readSampleMetaData.Rd | 4 man/readSdrf.Rd | 2 man/removeSampleInList.Rd | 4 man/testRobustToNAimputation.Rd | 8 vignettes/wrProteoVignette1.Rmd | 49 - vignettes/wrProteoVignetteUPS1.Rmd | 19 44 files changed, 1597 insertions(+), 1658 deletions(-)
More information about SPARRAfairness at CRAN
Permanent link
Title: Simple Method to Detect Compositional Changes in Genomic
Sequences
Description: This software is useful for loading '.fasta' or '.gbk' files, and for retrieving sequences from 'GenBank' dataset <https://www.ncbi.nlm.nih.gov/genbank/>. This package allows to detect differences or asymmetries based on nucleotide composition by using local linear kernel smoothers. Also, it is possible to draw inference about critical points (i. e. maximum or minimum points) related with the derivative curves. Additionally, bootstrap methods have been used for estimating confidence intervals and speed computational techniques (binning techniques) have been implemented in 'seq2R'.
Author: Nora M. Villanueva [aut, cre] ,
Marta Sestelo [aut] ,
Alan Miller [ctb]
Maintainer: Nora M. Villanueva <nmvillanueva@uvigo.es>
Diff between seq2R versions 1.1.0 dated 2023-01-06 and 2.0.0 dated 2023-04-20
seq2R-1.1.0/seq2R/R/change.binary.R |only seq2R-1.1.0/seq2R/R/change.points.R |only seq2R-1.1.0/seq2R/inst |only seq2R-1.1.0/seq2R/man/change.binary.Rd |only seq2R-1.1.0/seq2R/man/change.points.Rd |only seq2R-2.0.0/seq2R/DESCRIPTION | 8 +++--- seq2R-2.0.0/seq2R/MD5 | 25 ++++++++++----------- seq2R-2.0.0/seq2R/NAMESPACE | 4 +-- seq2R-2.0.0/seq2R/R/find.points.R |only seq2R-2.0.0/seq2R/R/transform.R |only seq2R-2.0.0/seq2R/demo/Example1.R | 32 ++++++++++++++++++--------- seq2R-2.0.0/seq2R/demo/Example2.R | 15 ++++++------ seq2R-2.0.0/seq2R/man/critical.Rd | 6 ++--- seq2R-2.0.0/seq2R/man/find.points.Rd |only seq2R-2.0.0/seq2R/man/plot.change.points.Rd | 4 +-- seq2R-2.0.0/seq2R/man/print.change.points.Rd | 10 ++++---- seq2R-2.0.0/seq2R/man/seq2R-package.Rd | 2 - seq2R-2.0.0/seq2R/man/transform.Rd |only 18 files changed, 59 insertions(+), 47 deletions(-)
Title: Generalised Linear Mixed Models in R
Description: Specification of generalised linear mixed models with a range of related functions and calculations. The package provides classes 'Covariance', 'MeanFunction' and 'Model', which allow for flexible specification of generalised linear mixed models, as well as functionality to produce relevant matrices, values, and analyses.
See <https://github.com/samuel-watson/glmmrBase/blob/master/README.md> for a detailed manual.
Author: Sam Watson [aut, cre]
Maintainer: Sam Watson <S.I.Watson@bham.ac.uk>
Diff between glmmrBase versions 0.2.5 dated 2023-02-24 and 0.3.1 dated 2023-04-20
glmmrBase-0.2.5/glmmrBase/R/d_funcs.R |only glmmrBase-0.2.5/glmmrBase/inst/include/glmmr/DData.h |only glmmrBase-0.2.5/glmmrBase/inst/include/glmmr/DMatrix.h |only glmmrBase-0.2.5/glmmrBase/inst/include/glmmr/glmm.h |only glmmrBase-0.2.5/glmmrBase/man/attenuate_xb.Rd |only glmmrBase-0.2.5/glmmrBase/man/dfactor.Rd |only glmmrBase-0.2.5/glmmrBase/man/dfexp.Rd |only glmmrBase-0.2.5/glmmrBase/man/didentity.Rd |only glmmrBase-0.2.5/glmmrBase/man/genCholD.Rd |only glmmrBase-0.2.5/glmmrBase/man/genD.Rd |only glmmrBase-0.2.5/glmmrBase/man/gen_dhdmu.Rd |only glmmrBase-0.2.5/glmmrBase/man/gen_sigma_approx.Rd |only glmmrBase-0.2.5/glmmrBase/man/sample_re.Rd |only glmmrBase-0.3.1/glmmrBase/DESCRIPTION | 30 glmmrBase-0.3.1/glmmrBase/MD5 | 89 glmmrBase-0.3.1/glmmrBase/NAMESPACE | 7 glmmrBase-0.3.1/glmmrBase/R/R6Model.R | 1226 +++++++--- glmmrBase-0.3.1/glmmrBase/R/R6covariance.R | 385 --- glmmrBase-0.3.1/glmmrBase/R/R6meanfunction.R | 173 - glmmrBase-0.3.1/glmmrBase/R/RcppExports.R | 361 ++ glmmrBase-0.3.1/glmmrBase/R/extrafunctions.R | 43 glmmrBase-0.3.1/glmmrBase/R/parallel_crt.R | 4 glmmrBase-0.3.1/glmmrBase/R/printfunctions.R |only glmmrBase-0.3.1/glmmrBase/R/staircase_crt.R | 4 glmmrBase-0.3.1/glmmrBase/R/steppedwedge.R | 4 glmmrBase-0.3.1/glmmrBase/build/partial.rdb |binary glmmrBase-0.3.1/glmmrBase/data |only glmmrBase-0.3.1/glmmrBase/inst/include/glmmr.h | 7 glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/algo.h | 164 + glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/covariance.hpp |only glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/covariance.ipp |only glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/formula.hpp |only glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/formula.ipp |only glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/general.h |only glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/interpreter.h |only glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/likelihood.ipp |only glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/linearpredictor.hpp |only glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/maths.h | 150 + glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/mhmcmc.ipp |only glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/model.hpp |only glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/model.ipp |only glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/openmpheader.h |only glmmrBase-0.3.1/glmmrBase/inst/include/glmmr/sparse.h |only glmmrBase-0.3.1/glmmrBase/inst/stan |only glmmrBase-0.3.1/glmmrBase/man/Covariance.Rd | 161 - glmmrBase-0.3.1/glmmrBase/man/MeanFunction.Rd | 38 glmmrBase-0.3.1/glmmrBase/man/Model.Rd | 738 ++++-- glmmrBase-0.3.1/glmmrBase/man/mcnr_family.Rd |only glmmrBase-0.3.1/glmmrBase/man/print.mcml.Rd |only glmmrBase-0.3.1/glmmrBase/man/summary.mcml.Rd |only glmmrBase-0.3.1/glmmrBase/man/yexample312a.Rd |only glmmrBase-0.3.1/glmmrBase/man/yexample312b.Rd |only glmmrBase-0.3.1/glmmrBase/man/yexample312c.Rd |only glmmrBase-0.3.1/glmmrBase/man/ytest1.Rd |only glmmrBase-0.3.1/glmmrBase/src/Makevars | 3 glmmrBase-0.3.1/glmmrBase/src/Makevars.win | 3 glmmrBase-0.3.1/glmmrBase/src/RcppExports.cpp | 871 ++++++- glmmrBase-0.3.1/glmmrBase/src/covariance_module.cpp |only glmmrBase-0.3.1/glmmrBase/src/gen_d.cpp | 170 - glmmrBase-0.3.1/glmmrBase/src/model_module.cpp |only glmmrBase-0.3.1/glmmrBase/tests |only 61 files changed, 3450 insertions(+), 1181 deletions(-)
Title: Global Envelopes
Description: Implementation of global envelopes for a set of general d-dimensional vectors T
in various applications. A 100(1-alpha)% global envelope is a band bounded by two
vectors such that the probability that T falls outside this envelope in any of the d
points is equal to alpha. Global means that the probability is controlled simultaneously
for all the d elements of the vectors. The global envelopes can be used for graphical
Monte Carlo and permutation tests where the test statistic is a multivariate vector or
function (e.g. goodness-of-fit testing for point patterns and random sets, functional
analysis of variance, functional general linear model, n-sample test of correspondence
of distribution functions), for central regions of functional or multivariate data (e.g.
outlier detection, functional boxplot) and for global confidence and prediction bands
(e.g. confidence band in polynomial regression, Bayesian posterior prediction). See
Myllymäki and Mrkvička (2020) <arXiv:1911.06583>,
Myl [...truncated...]
Author: Mari Myllymaeki [aut, cre],
Tomas Mrkvicka [aut],
Jiri Dvorak [ctb],
Pavel Grabarnik [ctb],
Ute Hahn [ctb],
Mikko Kuronen [ctb],
Michael Rost [ctb],
Henri Seijo [ctb]
Maintainer: Mari Myllymaeki <mari.myllymaki@luke.fi>
Diff between GET versions 0.3-2 dated 2022-11-16 and 0.4 dated 2023-04-20
GET-0.3-2/GET/man/GET.cdf.Rd |only GET-0.3-2/GET/man/GET.contingency.Rd |only GET-0.3-2/GET/man/GET.qq.Rd |only GET-0.4/GET/DESCRIPTION | 14 GET-0.4/GET/MD5 | 151 - GET-0.4/GET/NAMESPACE | 8 GET-0.4/GET/R/GDP.r |only GET-0.4/GET/R/GET-package.r | 16 GET-0.4/GET/R/adjusted_envelopes.r | 10 GET-0.4/GET/R/appl_ecdf.r | 4 GET-0.4/GET/R/appl_indeptest.r | 334 +-- GET-0.4/GET/R/appl_localcor.r | 4 GET-0.4/GET/R/appl_variogram.r | 2 GET-0.4/GET/R/combined_envelope_tests.R | 2 GET-0.4/GET/R/crop.r | 35 GET-0.4/GET/R/curve-set.r | 42 GET-0.4/GET/R/envelopes.r | 33 GET-0.4/GET/R/envelopes2d.r | 138 + GET-0.4/GET/R/fboxplot.r | 4 GET-0.4/GET/R/fclustering.r | 10 GET-0.4/GET/R/fdr.r | 10 GET-0.4/GET/R/forder.r | 5 GET-0.4/GET/R/glm.R | 10 GET-0.4/GET/R/plot_envelope_helper.R | 18 GET-0.4/GET/R/print_envelope_helper.R | 2 GET-0.4/GET/build/vignette.rds |binary GET-0.4/GET/data/GDP.RData |only GET-0.4/GET/data/GDPtax.RData |binary GET-0.4/GET/data/abide_9002_23.RData |binary GET-0.4/GET/data/adult_trees.RData |binary GET-0.4/GET/data/cgec.RData |binary GET-0.4/GET/data/datalist | 1 GET-0.4/GET/data/fallen_trees.RData |binary GET-0.4/GET/data/imageset3.RData |binary GET-0.4/GET/data/popgrowthmillion.RData |binary GET-0.4/GET/data/rimov.RData |binary GET-0.4/GET/data/saplings.RData |binary GET-0.4/GET/inst/CITATION | 183 - GET-0.4/GET/inst/doc/FDRenvelopes.pdf |only GET-0.4/GET/inst/doc/FDRenvelopes.tex.rsp |only GET-0.4/GET/inst/doc/GET.pdf |binary GET-0.4/GET/inst/doc/GET.tex.rsp | 962 +++++--- GET-0.4/GET/inst/doc/pointpatterns.pdf |binary GET-0.4/GET/man/GDP.Rd |only GET-0.4/GET/man/GET-package.Rd | 16 GET-0.4/GET/man/GET.composite.Rd | 2 GET-0.4/GET/man/GET.distrindep.Rd |only GET-0.4/GET/man/central_region.Rd | 2 GET-0.4/GET/man/create_curve_set.Rd | 10 GET-0.4/GET/man/crop_curves.Rd | 13 GET-0.4/GET/man/graph.flm.Rd | 6 GET-0.4/GET/man/partial_forder.Rd | 3 GET-0.4/GET/man/plot.combined_global_envelope2d.Rd | 25 GET-0.4/GET/man/plot.global_envelope.Rd | 5 GET-0.4/GET/man/plot.global_envelope2d.Rd | 28 GET-0.4/GET/vignettes/FDRenvelopes-example_pop_data_plot.pdf |only GET-0.4/GET/vignettes/FDRenvelopes-example_pop_data_plot1.pdf |only GET-0.4/GET/vignettes/FDRenvelopes-example_pop_data_testContinent.pdf |only GET-0.4/GET/vignettes/FDRenvelopes-example_pop_data_testContinentGDP.pdf |only GET-0.4/GET/vignettes/FDRenvelopes-example_pop_data_testGDP.pdf |only GET-0.4/GET/vignettes/FDRenvelopes-example_pop_data_testGDP_plot2.pdf |only GET-0.4/GET/vignettes/FDRenvelopes-example_rimov_FWER.pdf |only GET-0.4/GET/vignettes/FDRenvelopes-example_rimov_FWER_plot.pdf |only GET-0.4/GET/vignettes/FDRenvelopes-example_rimov_data.pdf |only GET-0.4/GET/vignettes/FDRenvelopes-r_data.pdf |only GET-0.4/GET/vignettes/FDRenvelopes-r_localcor.pdf |only GET-0.4/GET/vignettes/FDRenvelopes.Rnw.orig |only GET-0.4/GET/vignettes/FDRenvelopes.tex.rsp |only GET-0.4/GET/vignettes/GET-NOx_data.pdf |binary GET-0.4/GET/vignettes/GET-abide_9002_23_subj1and27.pdf |binary GET-0.4/GET/vignettes/GET-adulttrees.pdf |binary GET-0.4/GET/vignettes/GET-adulttrees_CSR_plot.pdf |binary GET-0.4/GET/vignettes/GET-example_pop_data.pdf |only GET-0.4/GET/vignettes/GET-example_pop_flm.pdf |only GET-0.4/GET/vignettes/GET-example_pop_plot.pdf |only GET-0.4/GET/vignettes/GET-flm_frank_abide.pdf |binary GET-0.4/GET/vignettes/GET-flm_graph_abide.pdf |binary GET-0.4/GET/vignettes/GET-girls_curves_fig.pdf |binary GET-0.4/GET/vignettes/GET-girls_fboxplot_plot.pdf |binary GET-0.4/GET/vignettes/GET-graphfanova_NOx_var_plot.pdf |only GET-0.4/GET/vignettes/GET-graphfanova_logNOx.pdf |binary GET-0.4/GET/vignettes/GET-graphfanova_logNOx_plot.pdf |only GET-0.4/GET/vignettes/GET-necdfs.pdf |binary GET-0.4/GET/vignettes/GET-necdfs_means_GET.pdf |binary GET-0.4/GET/vignettes/GET-normalitytest.pdf |binary GET-0.4/GET/vignettes/GET-polynomial.pdf |binary GET-0.4/GET/vignettes/GET-trees.pdf |only GET-0.4/GET/vignettes/GET-trees_CSR_plot.pdf |only GET-0.4/GET/vignettes/GET.Rnw.orig | 1069 +++++----- GET-0.4/GET/vignettes/GET.tex.rsp | 962 +++++--- GET-0.4/GET/vignettes/GETbibfile.bib | 130 + 91 files changed, 2494 insertions(+), 1775 deletions(-)
Title: Programmatic Access to the European Central Bank's Statistical
Data Warehouse
Description: Provides an interface to the 'European Central Bank's Statistical
Data Warehouse' API <https://sdw.ecb.europa.eu/>, allowing for programmatic
retrieval of a vast quantity of statistical data.
Author: Eric Persson [aut, cre]
Maintainer: Eric Persson <expersso5@gmail.com>
Diff between ecb versions 0.4.1 dated 2022-12-15 and 0.4.2 dated 2023-04-20
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/main.R | 10 ++++++++++ inst/doc/ecb_sdw.html | 4 ++-- 4 files changed, 19 insertions(+), 9 deletions(-)
Title: Climate Tools (Series Homogenization and Derived Products)
Description: Functions for the quality control, homogenization and missing data filling of climatological series and to obtain climatological summaries and grids from the results. Also functions to display wind-roses, meteograms, Walter&Lieth diagrams, and more.
Author: Jose A. Guijarro <jaguijarro21@gmail.com>
Maintainer: Jose A. Guijarro <jaguijarro21@gmail.com>
Diff between climatol versions 3.1.2 dated 2019-08-05 and 4.0.0 dated 2023-04-20
climatol-3.1.2/climatol/R/depurdat.R |only climatol-3.1.2/climatol/R/diagwl.R |only climatol-3.1.2/climatol/R/rosavent.R |only climatol-3.1.2/climatol/data/Ptest.rda |only climatol-3.1.2/climatol/data/Ttest.rda |only climatol-3.1.2/climatol/data/dailies.rda |only climatol-3.1.2/climatol/data/datcli.rda |only climatol-3.1.2/climatol/data/pcp_results.rda |only climatol-3.1.2/climatol/data/rclimdex.rda |only climatol-3.1.2/climatol/data/tmax.rda |only climatol-3.1.2/climatol/data/windfr.rda |only climatol-3.1.2/climatol/man/Ptest.Rd |only climatol-3.1.2/climatol/man/Ttest.Rd |only climatol-3.1.2/climatol/man/dailies.Rd |only climatol-3.1.2/climatol/man/datcli.Rd |only climatol-3.1.2/climatol/man/homogsplit.Rd |only climatol-3.1.2/climatol/man/pcp_results.Rd |only climatol-3.1.2/climatol/man/rclimdex.Rd |only climatol-3.1.2/climatol/man/rosavent.Rd |only climatol-3.1.2/climatol/man/tmax.Rd |only climatol-3.1.2/climatol/man/windfr.Rd |only climatol-4.0.0/climatol/DESCRIPTION | 24 - climatol-4.0.0/climatol/MD5 | 79 ++-- climatol-4.0.0/climatol/NAMESPACE | 22 - climatol-4.0.0/climatol/NEWS | 136 ++++--- climatol-4.0.0/climatol/R/clihomog.R |only climatol-4.0.0/climatol/R/clitools.R |only climatol-4.0.0/climatol/data/climatol_data.rda |only climatol-4.0.0/climatol/data/datalist | 9 climatol-4.0.0/climatol/inst |only climatol-4.0.0/climatol/man/Datasets.Rd |only climatol-4.0.0/climatol/man/IDFcurves.Rd |only climatol-4.0.0/climatol/man/MHisopleths.Rd |only climatol-4.0.0/climatol/man/QCthresholds.Rd |only climatol-4.0.0/climatol/man/climatol-internal.Rd | 14 climatol-4.0.0/climatol/man/climatol2rclimdex.Rd | 65 +-- climatol-4.0.0/climatol/man/csv2climatol.Rd |only climatol-4.0.0/climatol/man/dahgrid.Rd | 58 +-- climatol-4.0.0/climatol/man/dahstat.Rd | 116 +++--- climatol-4.0.0/climatol/man/daily2climatol.Rd | 75 ++-- climatol-4.0.0/climatol/man/datsubset.Rd | 43 +- climatol-4.0.0/climatol/man/db2dat.Rd | 49 +- climatol-4.0.0/climatol/man/dd2m.Rd | 69 +-- climatol-4.0.0/climatol/man/dens2Dplot.Rd |only climatol-4.0.0/climatol/man/diagwl.Rd | 81 ++-- climatol-4.0.0/climatol/man/exampleFiles.Rd |only climatol-4.0.0/climatol/man/fix.sunshine.Rd |only climatol-4.0.0/climatol/man/homogen.Rd | 404 +++++++++++------------ climatol-4.0.0/climatol/man/meteogram.Rd |only climatol-4.0.0/climatol/man/outrename.Rd | 44 +- climatol-4.0.0/climatol/man/rclimdex2climatol.Rd | 69 ++- climatol-4.0.0/climatol/man/runtnd.Rd |only climatol-4.0.0/climatol/man/sef2climatol.Rd |only climatol-4.0.0/climatol/man/windrose.Rd |only climatol-4.0.0/climatol/man/xls2csv.Rd |only 55 files changed, 704 insertions(+), 653 deletions(-)
Title: An Interface to Google's 'BigQuery' 'API'
Description: Easily talk to Google's 'BigQuery' database from R.
Author: Hadley Wickham [aut, cre] ,
Jennifer Bryan [aut] ,
Kungliga Tekniska Hoegskolan [ctb] ,
The NetBSD Foundation, Inc. [ctb] ,
Posit Software, PBC [cph, fnd]
Maintainer: Hadley Wickham <hadley@posit.co>
Diff between bigrquery versions 1.4.1 dated 2022-10-27 and 1.4.2 dated 2023-04-20
bigrquery-1.4.1/bigrquery/R/bigrquery.R |only bigrquery-1.4.1/bigrquery/tests/testthat/test-bq-projects.r |only bigrquery-1.4.1/bigrquery/tests/testthat/test-request.r |only bigrquery-1.4.2/bigrquery/DESCRIPTION | 40 +-- bigrquery-1.4.2/bigrquery/MD5 | 57 ++--- bigrquery-1.4.2/bigrquery/NAMESPACE | 5 bigrquery-1.4.2/bigrquery/NEWS.md | 17 + bigrquery-1.4.2/bigrquery/R/bigrquery-package.R |only bigrquery-1.4.2/bigrquery/R/bq-auth.R | 109 ++++++---- bigrquery-1.4.2/bigrquery/R/bq-download.R | 2 bigrquery-1.4.2/bigrquery/R/bq-job.R | 4 bigrquery-1.4.2/bigrquery/R/bq-request.R | 4 bigrquery-1.4.2/bigrquery/R/bq-test.R | 2 bigrquery-1.4.2/bigrquery/R/dplyr.R | 14 - bigrquery-1.4.2/bigrquery/R/utils.R | 4 bigrquery-1.4.2/bigrquery/R/zzz.R | 2 bigrquery-1.4.2/bigrquery/README.md | 78 +++---- bigrquery-1.4.2/bigrquery/inst/extdata |only bigrquery-1.4.2/bigrquery/man/bigrquery-package.Rd | 10 bigrquery-1.4.2/bigrquery/man/bq_auth.Rd | 11 - bigrquery-1.4.2/bigrquery/man/bq_auth_configure.Rd | 75 +++--- bigrquery-1.4.2/bigrquery/man/bq_oauth_app.Rd |only bigrquery-1.4.2/bigrquery/man/figures/lifecycle-archived.svg | 22 +- bigrquery-1.4.2/bigrquery/man/figures/lifecycle-defunct.svg | 22 +- bigrquery-1.4.2/bigrquery/man/figures/lifecycle-deprecated.svg | 22 +- bigrquery-1.4.2/bigrquery/man/figures/lifecycle-experimental.svg | 22 +- bigrquery-1.4.2/bigrquery/man/figures/lifecycle-maturing.svg | 22 +- bigrquery-1.4.2/bigrquery/man/figures/lifecycle-questioning.svg | 22 +- bigrquery-1.4.2/bigrquery/man/figures/lifecycle-soft-deprecated.svg |only bigrquery-1.4.2/bigrquery/man/figures/lifecycle-stable.svg | 30 ++ bigrquery-1.4.2/bigrquery/man/figures/lifecycle-superseded.svg | 22 +- bigrquery-1.4.2/bigrquery/tests/testthat/test-bq-projects.R |only bigrquery-1.4.2/bigrquery/tests/testthat/test-dplyr.R | 19 + bigrquery-1.4.2/bigrquery/tests/testthat/test-request.R |only 34 files changed, 434 insertions(+), 203 deletions(-)
Title: Tidy Interface to 'data.table'
Description: A tidy interface to 'data.table',
giving users the speed of 'data.table' while using tidyverse-like syntax.
Author: Mark Fairbanks [aut, cre],
Abdessabour Moutik [ctb],
Matt Carlson [ctb],
Ivan Leung [ctb],
Ross Kennedy [ctb],
Robert On [ctb],
Alexander Sevostianov [ctb],
Koen ter Berg [ctb]
Maintainer: Mark Fairbanks <mark.t.fairbanks@gmail.com>
Diff between tidytable versions 0.10.0 dated 2023-03-09 and 0.10.1 dated 2023-04-20
DESCRIPTION | 15 +++++++------- MD5 | 39 ++++++++++++++++++++------------------ NAMESPACE | 1 NEWS.md | 12 +++++++++++ R/as_tidytable.R | 4 +-- R/bind.R | 4 +-- R/case.R | 9 ++++---- R/case_match.R | 6 ++++- R/first-last-nth.R | 4 +-- R/in-notin.R | 5 ---- R/pivot_wider.R | 12 ++++++++++- R/reframe.R |only R/replace_na.R | 2 - R/utils-general.R | 21 ++++++++------------ R/utils-prep_exprs.R | 2 - README.md | 8 +++---- man/as_tidytable.Rd | 2 - man/reframe.Rd |only tests/testthat/test-case_when.R | 11 ++++++++++ tests/testthat/test-lag-lead.R | 8 +++---- tests/testthat/test-pivot_wider.R | 13 +++++++++--- tests/testthat/test-reframe.R |only 22 files changed, 110 insertions(+), 68 deletions(-)
Title: Another Approach to Package Installation
Description: The goal of 'pak' is to make package installation faster and
more reliable. In particular, it performs all HTTP operations in parallel,
so metadata resolution and package downloads are fast. Metadata and package
files are cached on the local disk as well. 'pak' has a dependency solver,
so it finds version conflicts before performing the installation. This
version of 'pak' supports CRAN, 'Bioconductor' and 'GitHub' packages as well.
Author: Gabor Csardi [aut, cre],
Jim Hester [aut],
RStudio [cph, fnd]
Maintainer: Gabor Csardi <csardi.gabor@gmail.com>
Diff between pak versions 0.4.0 dated 2023-01-15 and 0.5.0 dated 2023-04-20
DESCRIPTION | 8 +++--- MD5 | 36 +++++++++++++++++++----------- NAMESPACE | 7 +++++ NEWS.md | 43 ++++++++++++++++++++++++++++++++++++ R/cache.R | 29 ++++++++++++++++++++---- R/docs.R | 1 R/local.R | 11 +++++---- R/package.R | 9 ++----- R/ppm.R |only R/push-packages.R | 16 +++++++++---- R/subprocess.R | 11 +++++++-- R/system-requirements.R | 2 - R/system.R |only inst/header.md | 5 +++- man/pak-config.Rd | 1 man/ppm_has_binaries.Rd |only man/ppm_platforms.Rd |only man/ppm_r_versions.Rd |only man/ppm_repo_url.Rd |only man/ppm_snapshots.Rd |only man/system_r_platform.Rd |only tests/testthat/_snaps/subprocess.md |only tests/testthat/test-subprocess.R | 13 ++++++++++ tools/pkgdown |only 24 files changed, 151 insertions(+), 41 deletions(-)
Title: Version-Control for CRAN, GitHub, and GitLab Packages
Description: Make R scripts reproducible, by ensuring that
every time a given script is run, the same version of the used packages are
loaded (instead of whichever version the user running the script happens to
have installed). This is achieved by using the command
groundhog.library() instead of the base command library(), and including a
date in the call. The date is used to call on the same version of the
package every time (the most recent version available at that date).
Load packages from CRAN, GitHub, or Gitlab.
Author: Uri Simonsohn [aut, cre] ,
Hugo Gruson [ctb, aut]
Maintainer: Uri Simonsohn <urisohn@gmail.com>
Diff between groundhog versions 2.2.1 dated 2023-03-04 and 3.0.0 dated 2023-04-20
groundhog-2.2.1/groundhog/R/get.R.pkg.date.R |only groundhog-2.2.1/groundhog/R/get.date.for.install.binary.R |only groundhog-2.2.1/groundhog/R/groundhog.install.R |only groundhog-2.2.1/groundhog/R/groundhog.library.single.R |only groundhog-2.2.1/groundhog/R/groundhog.library.single.remote.R |only groundhog-2.2.1/groundhog/R/mran.is.up.R |only groundhog-2.2.1/groundhog/inst/missing.mran.dates.rds |only groundhog-2.2.1/groundhog/man/mran.is.up.Rd |only groundhog-3.0.0/groundhog/DESCRIPTION | 11 groundhog-3.0.0/groundhog/MD5 | 89 - groundhog-3.0.0/groundhog/NAMESPACE | 3 groundhog-3.0.0/groundhog/R/all.already.attached.R |only groundhog-3.0.0/groundhog/R/check.snowball.conflict.R | 368 ++--- groundhog-3.0.0/groundhog/R/estimate.seconds.left.R | 2 groundhog-3.0.0/groundhog/R/file.rename.robust.R |only groundhog-3.0.0/groundhog/R/file.rename.robust2.R |only groundhog-3.0.0/groundhog/R/get.active.R | 16 groundhog-3.0.0/groundhog/R/get.baton.R | 15 groundhog-3.0.0/groundhog/R/get.current.packages.R | 2 groundhog-3.0.0/groundhog/R/get.dependencies.R | 108 - groundhog-3.0.0/groundhog/R/get.gran.binary.date.R |only groundhog-3.0.0/groundhog/R/get.groundhog.folder.R | 110 + groundhog-3.0.0/groundhog/R/get.snowball.R | 89 - groundhog-3.0.0/groundhog/R/get.snowball.remote.R | 19 groundhog-3.0.0/groundhog/R/get.snowflakes.R |only groundhog-3.0.0/groundhog/R/get.version.R | 7 groundhog-3.0.0/groundhog/R/groundhog.library.R | 577 ++++++-- groundhog-3.0.0/groundhog/R/install.binaries.R |only groundhog-3.0.0/groundhog/R/install.one.R |only groundhog-3.0.0/groundhog/R/install.snowball.R | 542 ------- groundhog-3.0.0/groundhog/R/install.source.R |only groundhog-3.0.0/groundhog/R/installation.feedback.R | 2 groundhog-3.0.0/groundhog/R/interlibrary.functions.R |only groundhog-3.0.0/groundhog/R/load.cran.toc.R | 79 - groundhog-3.0.0/groundhog/R/localize.R | 216 +-- groundhog-3.0.0/groundhog/R/message.batch.installation.feedback.R |only groundhog-3.0.0/groundhog/R/remote_functions.R | 18 groundhog-3.0.0/groundhog/R/restore.library.R |only groundhog-3.0.0/groundhog/R/toc.R | 7 groundhog-3.0.0/groundhog/R/try.renaming.method.again.R |only groundhog-3.0.0/groundhog/R/update_cran.toc_if.needed.R | 11 groundhog-3.0.0/groundhog/R/utils.R | 701 +++++++--- groundhog-3.0.0/groundhog/R/validate.clone_date.R | 14 groundhog-3.0.0/groundhog/R/validate.groundhog.library.R |only groundhog-3.0.0/groundhog/R/validate.pkg_vrs.R | 15 groundhog-3.0.0/groundhog/R/validate_R.R | 26 groundhog-3.0.0/groundhog/R/verify.snowball.loaded.R | 49 groundhog-3.0.0/groundhog/R/zzz.R | 91 - groundhog-3.0.0/groundhog/README.md | 12 groundhog-3.0.0/groundhog/inst/background_scripts |only groundhog-3.0.0/groundhog/inst/cran.times.rds |binary groundhog-3.0.0/groundhog/inst/cran.toc.rds |binary groundhog-3.0.0/groundhog/inst/forced_minimum_date.txt |only groundhog-3.0.0/groundhog/man/groundhog.library.Rd | 65 groundhog-3.0.0/groundhog/man/restore.library.Rd |only groundhog-3.0.0/groundhog/man/set.groundhog.folder.Rd | 9 groundhog-3.0.0/groundhog/man/toc.Rd | 2 groundhog-3.0.0/groundhog/man/try.renaming.method.again.Rd |only 58 files changed, 1902 insertions(+), 1373 deletions(-)
Title: Distances and Routes on Geographical Grids
Description: Provides classes and functions to calculate various
distance measures and routes in heterogeneous geographic
spaces represented as grids. The package implements measures
to model dispersal histories first presented by van Etten and
Hijmans (2010) <doi:10.1371/journal.pone.0012060>. Least-cost
distances as well as more complex distances based on (constrained)
random walks can be calculated. The distances implemented in
the package are used in geographical genetics, accessibility
indicators, and may also have applications in other fields of
geospatial analysis.
Author: Jacob van Etten [aut] ,
Kaue de Sousa [ctb] ,
Andrew Marx [cre, ctb]
Maintainer: Andrew Marx <ajm.rpackages@gmail.com>
Diff between gdistance versions 1.6 dated 2022-10-10 and 1.6.2 dated 2023-04-20
DESCRIPTION | 26 + MD5 | 12 inst/CITATION | 10 inst/doc/Overview.R | 10 inst/doc/Overview.Rmd | 2 inst/doc/Overview.html | 639 +++++++++++++++++-------------------------------- vignettes/Overview.Rmd | 2 7 files changed, 259 insertions(+), 442 deletions(-)
Title: Tools for Computation on Batch Systems
Description: As a successor of the packages 'BatchJobs' and 'BatchExperiments',
this package provides a parallel implementation of the Map function for high
performance computing systems managed by schedulers 'IBM Spectrum LSF'
(<https://www.ibm.com/products/hpc-workload-management>),
'OpenLava' (<https://www.openlava.org/>), 'Univa Grid Engine'/'Oracle Grid
Engine' (<https://www.univa.com/>), 'Slurm' (<https://slurm.schedmd.com/>),
'TORQUE/PBS'
(<https://adaptivecomputing.com/cherry-services/torque-resource-manager/>),
or 'Docker Swarm' (<https://docs.docker.com/engine/swarm/>).
A multicore and socket mode allow the parallelization on a local machines,
and multiple machines can be hooked up via SSH to create a makeshift
cluster. Moreover, the package provides an abstraction mechanism to define
large-scale computer experiments in a well-organized and reproducible way.
Author: Michel Lang [cre, aut] ,
Bernd Bischl [aut],
Dirk Surmann [ctb]
Maintainer: Michel Lang <michellang@gmail.com>
Diff between batchtools versions 0.9.16 dated 2023-02-03 and 0.9.17 dated 2023-04-20
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- NEWS.md | 4 ++++ R/clusterFunctionsMulticore.R | 2 +- build/vignette.rds |binary inst/doc/batchtools.html | 4 ++-- 6 files changed, 15 insertions(+), 11 deletions(-)
Title: Automatic Machine Learning with 'tidymodels'
Description: The goal of this package will be to provide a simple interface for automatic machine learning that fits the 'tidymodels' framework. The intention is to work for regression and classification problems with a simple verb framework.
Author: Steven Sanderson [aut, cre, cph]
Maintainer: Steven Sanderson <spsanderson@gmail.com>
Diff between tidyAML versions 0.0.1 dated 2023-02-16 and 0.0.2 dated 2023-04-20
DESCRIPTION | 6 - MD5 | 16 +-- NEWS.md | 14 ++ R/00_global_variables.R | 3 R/extract-mod-spec.R | 28 ++++- R/internals-make-preds-wflw.R | 2 R/make-model-spec.R | 216 ++++++++++++++++++++++-------------------- README.md | 76 +++++++------- inst/doc/getting-started.html | 19 +-- 9 files changed, 216 insertions(+), 164 deletions(-)
Title: Tools for Working with the National Hydrography Dataset
Description: Tools for working with the National Hydrography Dataset, with
functions for querying, downloading, and networking both the NHD
<https://www.usgs.gov/national-hydrography>
and NHDPlus <https://www.epa.gov/waterdata/nhdplus-national-hydrography-dataset-plus> datasets.
Author: Jemma Stachelek [aut, cre]
Maintainer: Jemma Stachelek <jemma.stachelek@gmail.com>
Diff between nhdR versions 0.5.9 dated 2022-10-08 and 0.6.0 dated 2023-04-20
DESCRIPTION | 16 MD5 | 32 - NAMESPACE | 139 +++---- NEWS.md | 135 +++---- R/get.R | 217 ++++++------ R/info.R | 86 ++-- R/list.R | 101 ++--- R/utils.R | 787 ++++++++++++++++++++++----------------------- build/vignette.rds |binary inst/CITATION | 25 - inst/doc/demo.html | 250 +++++++++++++- inst/doc/flow.html | 320 +++++++++++++++--- inst/doc/network.html | 283 ++++++++++++++-- man/nhd_info.Rd | 48 +- man/nhd_plus_info.Rd | 60 +-- tests/testthat/test-info.R | 42 +- tests/testthat/test-load.R | 189 +++++----- 17 files changed, 1681 insertions(+), 1049 deletions(-)
Title: A Grammar of Data Manipulation
Description: A fast, consistent tool for working with data frame like
objects, both in memory and out of memory.
Author: Hadley Wickham [aut, cre] ,
Romain Francois [aut] ,
Lionel Henry [aut],
Kirill Mueller [aut] ,
Davis Vaughan [aut] ,
Posit Software, PBC [cph, fnd]
Maintainer: Hadley Wickham <hadley@posit.co>
Diff between dplyr versions 1.1.1 dated 2023-03-22 and 1.1.2 dated 2023-04-20
DESCRIPTION | 8 MD5 | 46 ++-- NEWS.md | 8 R/count-tally.R | 24 ++ R/join-cols.R | 3 README.md | 46 ++-- build/dplyr.pdf |binary inst/doc/base.html | 259 ++++++++++++------------- inst/doc/colwise.html | 44 ++-- inst/doc/dplyr.html | 349 +++++++++++++++++------------------ inst/doc/grouping.html | 138 ++++++------- inst/doc/programming.html | 8 inst/doc/rowwise.R | 4 inst/doc/rowwise.Rmd | 6 inst/doc/rowwise.html | 59 +++-- inst/doc/two-table.html | 52 ++--- inst/doc/window-functions.html | 6 man/count.Rd | 33 +++ man/select.Rd | 24 +- tests/testthat/_snaps/mutate.md | 2 tests/testthat/test-deprec-combine.R | 4 tests/testthat/test-join-cols.R | 22 ++ tests/testthat/test-join.R | 77 +++++++ vignettes/rowwise.Rmd | 6 24 files changed, 690 insertions(+), 538 deletions(-)
Title: Confounder-Adjusted Survival Curves and Cumulative Incidence
Functions
Description: Estimate and plot confounder-adjusted survival curves using
either 'Direct Adjustment', 'Direct Adjustment with Pseudo-Values',
various forms of 'Inverse Probability of Treatment Weighting', two
forms of 'Augmented Inverse Probability of Treatment Weighting' and
'Empirical Likelihood Estimation'.
Also includes a significance test for the difference
between two adjusted survival curves and the calculation of adjusted
restricted mean survival times. Additionally enables the user to
estimate and plot cause-specific confounder-adjusted cumulative
incidence functions in the competing risks setting using the same
methods (with some exceptions).
For details, see Denz et. al (2023) <doi:10.1002/sim.9681>.
Author: Robin Denz [aut, cre]
Maintainer: Robin Denz <robin.denz@rub.de>
Diff between adjustedCurves versions 0.10.0 dated 2023-02-16 and 0.10.1 dated 2023-04-20
DESCRIPTION | 6 MD5 | 42 NEWS.md | 5 inst/doc/introduction.html | 13 man/adjustedCurves.Rd | 122 +- tests/testthat/_snaps/adjustedcif_S3.md | 240 ++-- tests/testthat/_snaps/adjustedsurv_S3.md | 306 ++--- tests/testthat/_snaps/plot.adjustedcif/plot-using-boot.svg | 12 tests/testthat/_snaps/plot.adjustedcif/plot-using-conf-int-alpha.svg | 12 tests/testthat/_snaps/plot.adjustedcif/plot-using-many-many-things.svg | 12 tests/testthat/_snaps/plot.adjustedcif/plot-using-no-colors-ci.svg | 12 tests/testthat/_snaps/plot.adjustedcif/plot-with-conf-int.svg | 12 tests/testthat/_snaps/plot.adjustedsurv/plot-using-boot.svg | 12 tests/testthat/_snaps/plot.adjustedsurv/plot-using-conf-int-alpha.svg | 12 tests/testthat/_snaps/plot.adjustedsurv/plot-using-many-many-things.svg | 12 tests/testthat/_snaps/plot.adjustedsurv/plot-using-no-colors-ci.svg | 12 tests/testthat/_snaps/plot.adjustedsurv/plot-with-conf-int.svg | 12 tests/testthat/_snaps/plot_curve_diff/plot-with-conf-int-boot.svg | 6 tests/testthat/_snaps/plot_curve_diff/plot-with-conf-int.svg | 6 tests/testthat/_snaps/plot_curve_diff/plot-with-fill-area-steps.svg | 6 tests/testthat/_snaps/plot_curve_diff/plot-with-much-stuff.svg | 6 tests/testthat/test_cif_iptw_pseudo.r | 543 +++++----- 22 files changed, 722 insertions(+), 699 deletions(-)
More information about adjustedCurves at CRAN
Permanent link
Title: Supporting Functions for Packages Maintained by 'Yihui Xie'
Description: Miscellaneous functions commonly used in other packages maintained by 'Yihui Xie'.
Author: Yihui Xie [aut, cre, cph] ,
Wush Wu [ctb],
Daijiang Li [ctb],
Xianying Tan [ctb],
Salim Brueggemann [ctb] ,
Christophe Dervieux [ctb],
Posit Software, PBC [cph, fnd]
Maintainer: Yihui Xie <xie@yihui.name>
Diff between xfun versions 0.38 dated 2023-03-24 and 0.39 dated 2023-04-20
DESCRIPTION | 10 ++++++---- MD5 | 20 +++++++++++--------- NAMESPACE | 2 ++ NEWS.md | 10 ++++++++++ R/markdown.R | 4 ++-- R/revcheck.R | 16 +++++++--------- R/string.R | 21 ++++++++++++++++++++- R/utils.R | 38 ++++++++++++++++++++++++++++++++++++++ inst/doc/xfun.html | 8 ++++---- man/alnum_id.Rd | 6 +++++- man/env_option.Rd |only man/strip_html.Rd |only 12 files changed, 105 insertions(+), 30 deletions(-)
Title: Query 'SWI'-'Prolog' from R
Description: This R package connects to 'SWI'-'Prolog', <https://www.swi-prolog.org/>, so that R can send deterministic and non-deterministic queries to 'prolog' ('consult', 'query'/'submit', 'once', 'findall').
Author: Matthias Gondan [aut, com, cre] ,
European Commission [fnd]
Maintainer: Matthias Gondan <Matthias.Gondan-Rochon@uibk.ac.at>
Diff between rolog versions 0.9.11 dated 2023-01-27 and 0.9.12 dated 2023-04-20
rolog-0.9.11/rolog/src/Makevars.ucrt |only rolog-0.9.12/rolog/DESCRIPTION | 17 rolog-0.9.12/rolog/MD5 | 20 rolog-0.9.12/rolog/NEWS.md | 6 rolog-0.9.12/rolog/R/rolog.R | 30 rolog-0.9.12/rolog/build/vignette.rds |binary rolog-0.9.12/rolog/inst/doc/rolog.R | 474 ++--- rolog-0.9.12/rolog/inst/doc/rolog.Rmd | 61 rolog-0.9.12/rolog/inst/doc/rolog.html | 3058 +++++++++++++-------------------- rolog-0.9.12/rolog/inst/pl/interval.pl | 10 rolog-0.9.12/rolog/src/Makevars.win |only rolog-0.9.12/rolog/vignettes/rolog.Rmd | 61 12 files changed, 1590 insertions(+), 2147 deletions(-)
Title: Load Data from Facebook API Marketing
Description: Load data by campaigns, ads, ad sets and insights, ad account and business manager
from Facebook Marketing API into R. For more details see official documents by Facebook
Marketing API <https://developers.facebook.com/docs/marketing-apis/>.
Author: Alexey Seleznev [aut, cre]
Maintainer: Alexey Seleznev <selesnow@gmail.com>
Diff between rfacebookstat versions 2.8.1 dated 2023-03-17 and 2.9.2 dated 2023-04-20
DESCRIPTION | 6 +++--- MD5 | 18 +++++++++--------- NAMESPACE | 6 +++++- NEWS.md | 12 ++++++++++++ R/fbAPILimitCheck.R | 2 +- R/fbActions.R | 6 +++--- R/zzz.R | 2 +- README.md | 1 - build/partial.rdb |binary build/vignette.rds |binary 10 files changed, 34 insertions(+), 19 deletions(-)
Title: (Randomized) Quasi-Random Number Generators
Description: Functionality for generating (randomized) quasi-random numbers in
high dimensions.
Author: Marius Hofert [aut, cre],
Christiane Lemieux [aut]
Maintainer: Marius Hofert <mhofert@hku.hk>
Diff between qrng versions 0.0-8 dated 2020-11-26 and 0.0-9 dated 2023-04-20
DESCRIPTION | 18 +++++++++--------- MD5 | 12 ++++++------ NAMESPACE | 3 --- R/qrng.R | 5 ++++- R/test_functions.R | 12 +++++++----- man/test_functions.Rd | 6 +++--- man/to_array.Rd | 5 +++++ 7 files changed, 34 insertions(+), 27 deletions(-)
Title: Search Spaces for 'mlr3'
Description: Collection of search spaces for hyperparameter optimization in the
'mlr3' ecosystem. It features ready-to-use search spaces for many popular
machine learning algorithms. The search spaces are from scientific articles
and work for a wide range of data sets.
Author: Marc Becker [cre, aut] ,
Michel Lang [ctb]
Maintainer: Marc Becker <marcbecker@posteo.de>
Diff between mlr3tuningspaces versions 0.3.5 dated 2023-03-08 and 0.4.0 dated 2023-04-20
DESCRIPTION | 9 ++++--- MD5 | 18 ++++++++------- NEWS.md | 7 +++++ R/TuningSpace.R | 4 +-- R/bibentries.R | 10 ++++++++ R/tuning_spaces_rbv1.R |only R/tuning_spaces_rbv2.R | 12 +++++----- README.md | 46 +++++++++++++++++++++++++-------------- man/mlr_tuning_spaces_default.Rd | 20 ++++++++-------- man/mlr_tuning_spaces_rbv1.Rd |only man/mlr_tuning_spaces_rbv2.Rd | 32 +++++++++++++-------------- 11 files changed, 96 insertions(+), 62 deletions(-)
More information about mlr3tuningspaces at CRAN
Permanent link
Title: Modelling of Extreme Values
Description: Various tools for the analysis of univariate, multivariate and functional extremes. Exact simulation from max-stable processes [Dombry, Engelke and Oesting (2016) <doi:10.1093/biomet/asw008>, R-Pareto processes for various parametric models, including Brown-Resnick (Wadsworth and Tawn, 2014, <doi:10.1093/biomet/ast042>) and Extremal Student (Thibaud and Opitz, 2015, <doi:10.1093/biomet/asv045>). Threshold selection methods, including Wadsworth (2016) <doi:10.1080/00401706.2014.998345>, and Northrop and Coleman (2014) <doi:10.1007/s10687-014-0183-z>. Multivariate extreme diagnostics. Estimation and likelihoods for univariate extremes, e.g., Coles (2001) <doi:10.1007/978-1-4471-3675-0>.
Author: Leo Belzile [aut, cre] ,
Jennifer L. Wadsworth [aut],
Paul J. Northrop [aut],
Scott D. Grimshaw [aut],
Jin Zhang [ctb],
Michael A. Stephens [ctb],
Art B. Owen [ctb],
Raphael Huser [aut]
Maintainer: Leo Belzile <belzilel@gmail.com>
Diff between mev versions 1.14 dated 2022-04-25 and 1.15 dated 2023-04-20
mev-1.14/mev/vignettes/mev_vignette.bib |only mev-1.15/mev/DESCRIPTION | 17 mev-1.15/mev/MD5 | 135 ++++--- mev-1.15/mev/NAMESPACE | 16 mev-1.15/mev/NEWS.md | 110 +++--- mev-1.15/mev/R/RcppExports.R | 6 mev-1.15/mev/R/asymcoef.R | 7 mev-1.15/mev/R/bias.R | 16 mev-1.15/mev/R/bivpot.R | 40 +- mev-1.15/mev/R/datasets.R | 2 mev-1.15/mev/R/distributions.R |only mev-1.15/mev/R/egp.R | 25 - mev-1.15/mev/R/extcoef.R | 2 mev-1.15/mev/R/gp.R | 58 +++ mev-1.15/mev/R/infomattest.R | 4 mev-1.15/mev/R/maxstabtest.R | 10 mev-1.15/mev/R/mgplikelihoods.R | 208 +++++++++-- mev-1.15/mev/R/mle.R | 34 - mev-1.15/mev/R/multivar.R | 2 mev-1.15/mev/R/penultimate.R | 27 - mev-1.15/mev/R/profile.R | 435 +++++++++---------------- mev-1.15/mev/R/rgparp.R | 6 mev-1.15/mev/R/rmev.R | 7 mev-1.15/mev/R/rparpcs.R | 2 mev-1.15/mev/R/scoretestindep.R |only mev-1.15/mev/R/specdens.R | 2 mev-1.15/mev/R/taildep.R | 149 +++++--- mev-1.15/mev/R/threshold.R | 44 ++ mev-1.15/mev/R/univdist.R | 4 mev-1.15/mev/R/vartymetric.R | 10 mev-1.15/mev/build/partial.rdb |binary mev-1.15/mev/build/vignette.rds |binary mev-1.15/mev/inst/CITATION | 23 - mev-1.15/mev/inst/doc/mev-vignette.Rnw | 61 +-- mev-1.15/mev/inst/doc/mev-vignette.pdf |binary mev-1.15/mev/inst/tinytest/test-distribution.R |only mev-1.15/mev/inst/tinytest/test-mle.R | 43 -- mev-1.15/mev/man/angmeasdir.Rd | 2 mev-1.15/mev/man/chibar.Rd | 2 mev-1.15/mev/man/clikmgp.Rd | 11 mev-1.15/mev/man/distg.Rd | 5 mev-1.15/mev/man/dot-gpd_2D_fit.Rd |only mev-1.15/mev/man/egp.Rd | 2 mev-1.15/mev/man/ext.index.Rd | 2 mev-1.15/mev/man/fit.egp.Rd | 4 mev-1.15/mev/man/fit.gev.Rd | 2 mev-1.15/mev/man/gev.bcor.Rd | 10 mev-1.15/mev/man/gev.mle.Rd | 2 mev-1.15/mev/man/gev.pll.Rd | 8 mev-1.15/mev/man/gev.tem.Rd | 6 mev-1.15/mev/man/gevdist.Rd |only mev-1.15/mev/man/gpd.bcor.Rd | 2 mev-1.15/mev/man/gpd.mle.Rd | 2 mev-1.15/mev/man/gpd.pll.Rd | 2 mev-1.15/mev/man/gpd.tem.Rd | 4 mev-1.15/mev/man/gpdist.Rd |only mev-1.15/mev/man/ibvpot.Rd | 18 - mev-1.15/mev/man/infomat.test.Rd | 2 mev-1.15/mev/man/likmgp.Rd | 8 mev-1.15/mev/man/nidd.Rd | 2 mev-1.15/mev/man/plot.fr.Rd | 4 mev-1.15/mev/man/pp.infomat.Rd | 2 mev-1.15/mev/man/pp.score.Rd | 6 mev-1.15/mev/man/rmev.Rd | 10 mev-1.15/mev/man/scoreindep.Rd |only mev-1.15/mev/man/smith.penult.Rd | 4 mev-1.15/mev/man/smith.penult.fn.Rd | 17 mev-1.15/mev/man/taildep.Rd | 18 - mev-1.15/mev/src/Makevars | 21 + mev-1.15/mev/src/Makevars.win | 2 mev-1.15/mev/src/auxiliary_fun.cpp | 6 mev-1.15/mev/vignettes/mev-vignette.Rnw | 61 +-- mev-1.15/mev/vignettes/mevvignette.bib |only 73 files changed, 979 insertions(+), 773 deletions(-)
Title: Simple Definition Of Time Intervals
Description: Simple definition of time intervals for the current, previous, and next week, month, quarter and year.
Author: Alexey Seleznev [aut, cre]
Maintainer: Alexey Seleznev <selesnow@gmail.com>
Diff between timeperiodsR versions 0.6.2 dated 2020-04-03 and 0.7.1 dated 2023-04-20
DESCRIPTION | 10 MD5 | 66 +-- NAMESPACE | 2 NEWS.md | 15 R/check_dayoffs.R | 48 ++ R/custom_period.R | 2 R/last_n_days.R | 2 R/last_n_months.R | 2 R/last_n_quarters.R | 4 R/last_n_weeks.R | 2 R/last_n_years.R | 2 R/next_month.R | 2 R/next_n_days.R | 2 R/next_n_months.R | 2 R/next_n_quarters.R | 2 R/next_n_weeks.R | 2 R/next_n_years.R | 2 R/next_quarter.R | 2 R/next_week.R | 2 R/next_year.R | 2 R/operators.R | 20 - R/previous_month.R | 2 R/previous_quarter.R | 2 R/previous_week.R | 2 R/previous_year.R | 2 R/this_month.R | 2 R/this_quarter.R | 2 R/this_week.R | 2 R/this_year.R | 2 R/zzz.R | 6 README.md | 45 +- build/partial.rdb |binary build/vignette.rds |binary inst/doc/tpr_intro.html | 826 ++++++++++++++++++++++++++++-------------------- 34 files changed, 641 insertions(+), 445 deletions(-)
Title: Crops an Image to a Circle
Description: Images are cropped to a circle with a transparent background. The function takes a
vector of images, either local or from a link, and circle crops the image. Paths to the
cropped image are returned for plotting with 'ggplot2'.
Author: Daniel Oehm [aut, cre]
Maintainer: Daniel Oehm <danieloehm@gmail.com>
Diff between cropcircles versions 0.2.1 dated 2023-02-17 and 0.2.2 dated 2023-04-20
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- NEWS.md | 5 +++++ R/crop.R | 32 ++++++++++++++++++++------------ R/helpers.R | 5 ++++- 5 files changed, 36 insertions(+), 20 deletions(-)
Title: Extension of 'lixoftConnectors' for 'Simulx'
Description: Provides useful tools which supplement the use of 'Simulx' software and 'R' connectors ('Monolix Suite'). 'Simulx' is an easy, efficient and flexible application for clinical trial simulations. You need 'Simulx' software to be installed in order to use 'RsSimulx' package. Among others tasks, 'RsSimulx' provides the same functions as package 'mlxR' does with a compatibility with 'Simulx' software.
Author: Clemence Pinaud [aut],
Jonathan Chauvin [aut],
Marc Lavielle [ctb],
Frano Mihaljevic [aut, cre]
Maintainer: Frano Mihaljevic <support@lixoft.com>
Diff between RsSimulx versions 2.0.2 dated 2022-11-23 and 2023.1 dated 2023-04-20
DESCRIPTION | 11 +- MD5 | 20 ++-- R/simulxR.R | 3 R/smlx-checks.R | 7 + R/smlx-tools.R | 24 +---- tests/testthat/test-demos.R | 2 tests/testthat/test-simpop.R | 2 tests/testthat/test-simulation-mlxproject.R | 10 +- tests/testthat/test-simulation-model.R | 10 +- tests/testthat/test-simulation.R | 125 ++++++++++------------------ tests/testthat/test-writedata.R | 6 - 11 files changed, 96 insertions(+), 124 deletions(-)
Title: Approximate Optimal Experimental Designs Using Generalised
Linear Mixed Models
Description: Optimal design analysis algorithms for any study design that can be represented or
modelled as a generalised linear mixed model including cluster randomised trials,
cohort studies, spatial and temporal epidemiological studies, and split-plot designs.
See <https://github.com/samuel-watson/glmmrBase/blob/master/README.md> for a
detailed manual on model specification. A detailed discussion of the methods in this
package can be found in Watson and Pan (2022) <arXiv:2207.09183>.
Author: Sam Watson [aut, cre],
Yi Pan [aut]
Maintainer: Sam Watson <S.I.Watson@bham.ac.uk>
Diff between glmmrOptim versions 0.2.3 dated 2023-02-24 and 0.2.4 dated 2023-04-20
DESCRIPTION | 12 +++--- MD5 | 12 +++--- R/R6designspace.R | 75 ++++++++++++++++++++++++++++++--------- inst/include/optim/optimclass.h | 2 - inst/include/optim/optimlinalg.h | 2 - inst/include/optim/optimmaths.h | 2 - man/DesignSpace.Rd | 26 ++++++++----- 7 files changed, 89 insertions(+), 42 deletions(-)
Title: Generalized Kernel Regularized Least Squares
Description: Kernel regularized least squares, also known as kernel ridge regression,
is a flexible machine learning method. This package implements this method by
providing a smooth term for use with 'mgcv' and uses random sketching to
facilitate scalable estimation on large datasets. It provides additional
functions for calculating marginal effects after estimation and for use with
ensembles ('SuperLearning'), double/debiased machine learning ('DoubleML'),
and robust/clustered standard errors ('sandwich'). Chang and Goplerud (2023)
<arXiv:2209.14355> provide further details.
Author: Qing Chang [aut],
Max Goplerud [aut, cre]
Maintainer: Max Goplerud <mgoplerud@pitt.edu>
Diff between gKRLS versions 1.0.1 dated 2023-04-17 and 1.0.2 dated 2023-04-20
.Rinstignore | 3 - DESCRIPTION | 8 ++-- MD5 | 7 ++-- NEWS.md |only README.md | 13 ++++++- src/marginal_effects.cpp | 81 ++++++++++++++++++++++++++++++++++------------- 6 files changed, 81 insertions(+), 31 deletions(-)
Title: Raw Data Quality Control Tool for LC-MS System
Description: Assess LC–MS system performance by visualizing instrument log
files and monitoring raw quality control samples within a project.
Author: Yonghui Dong [cre, aut]
Maintainer: Yonghui Dong <yonghui.dong@gmail.com>
Diff between RawHummus versions 0.3.0 dated 2023-03-23 and 0.3.3 dated 2023-04-20
DESCRIPTION | 6 ++-- MD5 | 16 +++++------ R/app_ui.R | 1 R/mod_qcView.R | 3 +- build/vignette.rds |binary inst/app/www/Report.Rmd | 2 - inst/doc/RawHummus.Rmd | 47 +++++++++++++++++++++++++--------- inst/doc/RawHummus.html | 65 +++++++++++++++++++++++++++++++++++++----------- vignettes/RawHummus.Rmd | 47 +++++++++++++++++++++++++--------- 9 files changed, 135 insertions(+), 52 deletions(-)
Title: Extra Functionality for 'leaflet' Package
Description: Several 'leaflet' plugins are integrated, which are available as extension to the 'leaflet' package.
Author: Gatscha Sebastian [aut, cre],
Ricardo Rodrigo Basa [ctb],
Jeffrey O Hanson [ctb]
Maintainer: Gatscha Sebastian <sebastian_gatscha@gmx.at>
Diff between leaflet.extras2 versions 1.2.0 dated 2022-05-10 and 1.2.1 dated 2023-04-20
leaflet.extras2-1.2.0/leaflet.extras2/inst/htmlwidgets/lfx-heightgraph/d3.js |only leaflet.extras2-1.2.1/leaflet.extras2/DESCRIPTION | 10 leaflet.extras2-1.2.1/leaflet.extras2/MD5 | 71 leaflet.extras2-1.2.1/leaflet.extras2/NEWS.md | 7 leaflet.extras2-1.2.1/leaflet.extras2/R/arrowhead.R | 9 leaflet.extras2-1.2.1/leaflet.extras2/R/heightgraph.R | 2 leaflet.extras2-1.2.1/leaflet.extras2/R/hexbin.R | 2 leaflet.extras2-1.2.1/leaflet.extras2/R/mapkeyIcon.R | 6 leaflet.extras2-1.2.1/leaflet.extras2/R/playback.R | 12 leaflet.extras2-1.2.1/leaflet.extras2/R/sidebar.R | 32 leaflet.extras2-1.2.1/leaflet.extras2/R/wms.R | 8 leaflet.extras2-1.2.1/leaflet.extras2/inst/examples/heightgraph_app.R | 3 leaflet.extras2-1.2.1/leaflet.extras2/inst/examples/hexbin_app.R | 4 leaflet.extras2-1.2.1/leaflet.extras2/inst/examples/playback_app_awesomemarkers.R |only leaflet.extras2-1.2.1/leaflet.extras2/inst/examples/playback_app_divicon.R |only leaflet.extras2-1.2.1/leaflet.extras2/inst/examples/sidebar_app.R | 95 leaflet.extras2-1.2.1/leaflet.extras2/inst/htmlwidgets/lfx-heightgraph/L.Control.Heightgraph.css | 149 leaflet.extras2-1.2.1/leaflet.extras2/inst/htmlwidgets/lfx-heightgraph/L.Control.Heightgraph.js | 1001 leaflet.extras2-1.2.1/leaflet.extras2/inst/htmlwidgets/lfx-hexbin/HexbinLayer.js | 5 leaflet.extras2-1.2.1/leaflet.extras2/inst/htmlwidgets/lfx-hexbin/d3.js |10302 +++++----- leaflet.extras2-1.2.1/leaflet.extras2/inst/htmlwidgets/lfx-hexbin/hexbin-bindings.js | 2 leaflet.extras2-1.2.1/leaflet.extras2/inst/htmlwidgets/lfx-playback/leaflet.playback-bindings.js | 5 leaflet.extras2-1.2.1/leaflet.extras2/inst/htmlwidgets/lfx-sidebar/leaflet-sidebar-binding.js | 26 leaflet.extras2-1.2.1/leaflet.extras2/inst/htmlwidgets/lfx-sidebar/leaflet-sidebar.css | 113 leaflet.extras2-1.2.1/leaflet.extras2/inst/htmlwidgets/lfx-sidebar/leaflet-sidebar.js | 16 leaflet.extras2-1.2.1/leaflet.extras2/man/addHexbin.Rd | 2 leaflet.extras2-1.2.1/leaflet.extras2/man/addPlayback.Rd | 5 leaflet.extras2-1.2.1/leaflet.extras2/man/addSidebar.Rd | 7 leaflet.extras2-1.2.1/leaflet.extras2/man/addWMS.Rd | 6 leaflet.extras2-1.2.1/leaflet.extras2/man/arrowheadOptions.Rd | 4 leaflet.extras2-1.2.1/leaflet.extras2/man/closeSidebar.Rd | 2 leaflet.extras2-1.2.1/leaflet.extras2/man/makeMapkeyIcon.Rd | 6 leaflet.extras2-1.2.1/leaflet.extras2/man/mapkeyIcons.Rd | 6 leaflet.extras2-1.2.1/leaflet.extras2/man/openSidebar.Rd | 6 leaflet.extras2-1.2.1/leaflet.extras2/man/removeSidebar.Rd | 2 leaflet.extras2-1.2.1/leaflet.extras2/man/to_jsonformat.Rd | 4 leaflet.extras2-1.2.1/leaflet.extras2/tests/testthat/test-sidebar.R | 16 leaflet.extras2-1.2.1/leaflet.extras2/tests/testthat/test-velocity.R | 3 38 files changed, 6415 insertions(+), 5534 deletions(-)
More information about leaflet.extras2 at CRAN
Permanent link
Title: Landscape Connectivity, Habitat, and Protected Area Networks
Description: Given a landscape resistance surface, creates minimum planar graph
(Fall et al. (2007) <doi:10.1007/s10021-007-9038-7>) and grains of connectivity
(Galpern et al. (2012) <doi:10.1111/j.1365-294X.2012.05677.x>) models that can be
used to calculate effective distances for landscape connectivity at multiple scales.
Documentation is provided by several vignettes, and a paper
(Chubaty, Galpern & Doctolero (2020) <doi:10.1111/2041-210X.13350>).
Author: Paul Galpern [aut, cph] ,
Sam Doctolero [aut],
Alex M Chubaty [aut, cre]
Maintainer: Alex M Chubaty <alex.chubaty@gmail.com>
Diff between grainscape versions 0.4.3 dated 2020-09-01 and 0.4.4 dated 2023-04-20
grainscape-0.4.3/grainscape/R/deprecated.R |only grainscape-0.4.4/grainscape/DESCRIPTION | 22 grainscape-0.4.4/grainscape/MD5 | 156 ++-- grainscape-0.4.4/grainscape/NAMESPACE | 7 grainscape-0.4.4/grainscape/NEWS.md | 18 grainscape-0.4.4/grainscape/R/GOC.R | 132 ++- grainscape-0.4.4/grainscape/R/MPG.R | 218 +++-- grainscape-0.4.4/grainscape/R/classes.R | 126 +-- grainscape-0.4.4/grainscape/R/corridor.R | 85 +- grainscape-0.4.4/grainscape/R/distance.R | 33 grainscape-0.4.4/grainscape/R/export.R | 190 ++--- grainscape-0.4.4/grainscape/R/extract.R | 16 grainscape-0.4.4/grainscape/R/ggGS.R | 207 ++--- grainscape-0.4.4/grainscape/R/grain.R | 54 - grainscape-0.4.4/grainscape/R/grainscape-deprecated.R |only grainscape-0.4.4/grainscape/R/grainscape-package.R | 32 grainscape-0.4.4/grainscape/R/graphdf.R | 53 - grainscape-0.4.4/grainscape/R/habitatConnectivityEngine.R | 20 grainscape-0.4.4/grainscape/R/patchFilter.R | 75 + grainscape-0.4.4/grainscape/R/plot.R | 206 +++-- grainscape-0.4.4/grainscape/R/point.R | 53 - grainscape-0.4.4/grainscape/R/theme_grainscape.R | 26 grainscape-0.4.4/grainscape/R/threshold.R | 39 - grainscape-0.4.4/grainscape/README.md | 18 grainscape-0.4.4/grainscape/build/partial.rdb |only grainscape-0.4.4/grainscape/build/vignette.rds |binary grainscape-0.4.4/grainscape/inst/WORDLIST | 82 -- grainscape-0.4.4/grainscape/inst/doc/MPG_algorithm.R | 2 grainscape-0.4.4/grainscape/inst/doc/MPG_algorithm.Rmd | 2 grainscape-0.4.4/grainscape/inst/doc/MPG_algorithm.pdf |binary grainscape-0.4.4/grainscape/inst/doc/grainscape_vignette.R | 376 ++++++---- grainscape-0.4.4/grainscape/inst/doc/grainscape_vignette.Rmd | 376 ++++++---- grainscape-0.4.4/grainscape/inst/doc/grainscape_vignette.pdf |binary grainscape-0.4.4/grainscape/inst/examples/example_export.R | 17 grainscape-0.4.4/grainscape/inst/examples/example_ggGS.R | 15 grainscape-0.4.4/grainscape/inst/examples/example_graphdf.R | 4 grainscape-0.4.4/grainscape/inst/examples/example_plot.R | 6 grainscape-0.4.4/grainscape/inst/examples/example_preamble.R | 1 grainscape-0.4.4/grainscape/inst/examples/example_preamble_GOC.R | 1 grainscape-0.4.4/grainscape/inst/examples/example_preamble_MPG.R | 1 grainscape-0.4.4/grainscape/man/GOC.Rd | 19 grainscape-0.4.4/grainscape/man/MPG.Rd | 10 grainscape-0.4.4/grainscape/man/corridor-class.Rd | 6 grainscape-0.4.4/grainscape/man/corridor.Rd | 13 grainscape-0.4.4/grainscape/man/distance.Rd | 9 grainscape-0.4.4/grainscape/man/export.Rd | 125 +-- grainscape-0.4.4/grainscape/man/extract.Rd | 2 grainscape-0.4.4/grainscape/man/ggGS.Rd | 82 +- grainscape-0.4.4/grainscape/man/goc-class.Rd | 4 grainscape-0.4.4/grainscape/man/grain-class.Rd | 4 grainscape-0.4.4/grainscape/man/grain.Rd | 25 grainscape-0.4.4/grainscape/man/grainscape-defunct.Rd | 2 grainscape-0.4.4/grainscape/man/grainscape-deprecated.Rd | 18 grainscape-0.4.4/grainscape/man/grainscape-maps.Rd | 18 grainscape-0.4.4/grainscape/man/grainscape-package.Rd | 16 grainscape-0.4.4/grainscape/man/graphdf.Rd | 17 grainscape-0.4.4/grainscape/man/habConnEngine.Rd | 2 grainscape-0.4.4/grainscape/man/mpg-class.Rd | 2 grainscape-0.4.4/grainscape/man/patchFilter.Rd | 15 grainscape-0.4.4/grainscape/man/plot.Rd | 32 grainscape-0.4.4/grainscape/man/point.Rd | 31 grainscape-0.4.4/grainscape/man/show.Rd | 4 grainscape-0.4.4/grainscape/man/theme_grainscape.Rd | 10 grainscape-0.4.4/grainscape/man/threshold.Rd | 22 grainscape-0.4.4/grainscape/src/RcppExports.cpp | 5 grainscape-0.4.4/grainscape/tests/testthat/test-MPG.R | 4 grainscape-0.4.4/grainscape/tests/testthat/test-corridor-distance-point.R | 6 grainscape-0.4.4/grainscape/vignettes/MPG_algorithm.Rmd | 2 grainscape-0.4.4/grainscape/vignettes/grainscape_vignette.Rmd | 376 ++++++---- grainscape-0.4.4/grainscape/vignettes/grainscape_vignette_files |only 70 files changed, 2020 insertions(+), 1530 deletions(-)
Title: Portable Native and Joint Stack Traces
Description: Obtain the native stack trace and fuse it with R's
stack trace for easier debugging of R packages with native code.
Author: Kirill Mueller [aut, cre] ,
R Consortium [fnd],
Ian Lance Taylor [aut] ,
Free Software Foundation [cph]
Maintainer: Kirill Mueller <kirill@cynkra.com>
Diff between winch versions 0.0.12 dated 2023-02-01 and 0.1.0 dated 2023-04-20
winch-0.0.12/winch/tests/testthat/test-add_trace_back.R |only winch-0.1.0/winch/DESCRIPTION | 10 winch-0.1.0/winch/MD5 | 33 - winch-0.1.0/winch/NAMESPACE | 1 winch-0.1.0/winch/NEWS.md | 17 winch-0.1.0/winch/R/add_trace_back.R | 25 winch-0.1.0/winch/R/trace_back.R | 5 winch-0.1.0/winch/R/winch-package.R | 1 winch-0.1.0/winch/inst/doc/report.html | 368 +++++++------- winch-0.1.0/winch/man/figures |only winch-0.1.0/winch/man/winch_add_trace_back.Rd | 20 winch-0.1.0/winch/man/winch_trace_back.Rd | 2 winch-0.1.0/winch/src/trace_back_backtrace.c | 2 winch-0.1.0/winch/tests/testthat/_snaps/add_trace_back.md | 6 winch-0.1.0/winch/tests/testthat/test-trace_back.R | 2 15 files changed, 265 insertions(+), 227 deletions(-)
Title: Interface for the 'QuickJS' Lightweight 'JavaScript' Engine
Description: An 'R' interface to the 'QuickJS' portable 'JavaScript' engine.
The engine is bundled entirely within the package, requiring no external system
dependencies beyond a 'C' compiler.
Author: Andrew R. Johnson [aut, cre] ,
Fabrice Bellard [ctb, cph] ,
Charlie Gordon [ctb, cph]
Maintainer: Andrew R. Johnson <andrew.johnson@arjohnsonau.com>
Diff between QuickJSR versions 1.0.3 dated 2023-04-14 and 1.0.4 dated 2023-04-20
QuickJSR-1.0.3/QuickJSR/inst/WORDLIST |only QuickJSR-1.0.4/QuickJSR/DESCRIPTION | 6 QuickJSR-1.0.4/QuickJSR/MD5 | 23 +- QuickJSR-1.0.4/QuickJSR/R/flags.R | 3 QuickJSR-1.0.4/QuickJSR/src/Makevars | 18 - QuickJSR-1.0.4/QuickJSR/src/qjs_impl.c | 2 QuickJSR-1.0.4/QuickJSR/src/quickjs/cutils.c | 7 QuickJSR-1.0.4/QuickJSR/src/quickjs/libbf.c | 3 QuickJSR-1.0.4/QuickJSR/src/quickjs/libregexp.c | 3 QuickJSR-1.0.4/QuickJSR/src/quickjs/libunicode.c | 53 ++--- QuickJSR-1.0.4/QuickJSR/src/quickjs/quickjs-libc.c | 12 + QuickJSR-1.0.4/QuickJSR/src/quickjs/quickjs.c | 65 ++++++ QuickJSR-1.0.4/QuickJSR/src/quickjs/unicode_gen.c | 213 ++++++++++++++------- 13 files changed, 283 insertions(+), 125 deletions(-)
Title: An Alternative 'Rcpp' Wrapper of 'MeCab'
Description: A plain 'Rcpp' wrapper of 'MeCab' that can segment Chinese,
Japanese, and Korean text into tokens. The main goal of this package
is to provide an alternative to 'tidytext' using morphological
analysis.
Author: Akiru Kato [aut, cre],
Shogo Ichinose [aut],
Taku Kudo [aut],
Jorge Nocedal [ctb],
Nippon Telegraph and Telephone Corporation [cph]
Maintainer: Akiru Kato <paithiov909@gmail.com>
Diff between gibasa versions 0.9.2 dated 2023-04-12 and 0.9.3 dated 2023-04-20
gibasa-0.9.2/gibasa/src/dictionary_rewriter.cpp |only gibasa-0.9.2/gibasa/src/dictionary_rewriter.h |only gibasa-0.9.2/gibasa/src/feature_index.cpp |only gibasa-0.9.2/gibasa/src/feature_index.h |only gibasa-0.9.2/gibasa/src/lbfgs.cpp |only gibasa-0.9.2/gibasa/src/lbfgs.h |only gibasa-0.9.2/gibasa/src/learner.cpp |only gibasa-0.9.2/gibasa/src/learner_tagger.cpp |only gibasa-0.9.2/gibasa/src/learner_tagger.h |only gibasa-0.9.2/gibasa/src/winmain.h |only gibasa-0.9.3/gibasa/DESCRIPTION | 6 gibasa-0.9.3/gibasa/MD5 | 60 +- gibasa-0.9.3/gibasa/NEWS.md | 4 gibasa-0.9.3/gibasa/R/RcppExports.R | 152 +++---- gibasa-0.9.3/gibasa/R/other-reexports.R | 10 gibasa-0.9.3/gibasa/R/utils.R | 222 +++++----- gibasa-0.9.3/gibasa/README.md | 510 ++++++++++++------------ gibasa-0.9.3/gibasa/build/partial.rdb |binary gibasa-0.9.3/gibasa/man/bind_lr.Rd | 11 gibasa-0.9.3/gibasa/man/bind_tf_idf2.Rd | 160 +++---- gibasa-0.9.3/gibasa/man/collapse_tokens.Rd | 86 ++-- gibasa-0.9.3/gibasa/man/dictionary_info.Rd | 32 - gibasa-0.9.3/gibasa/man/get_transition_cost.Rd | 48 +- gibasa-0.9.3/gibasa/man/gibasa-package.Rd | 70 +-- gibasa-0.9.3/gibasa/man/is_blank.Rd | 48 +- gibasa-0.9.3/gibasa/man/lex_density.Rd | 110 ++--- gibasa-0.9.3/gibasa/man/mute_tokens.Rd | 74 +-- gibasa-0.9.3/gibasa/man/pack.Rd | 128 +++--- gibasa-0.9.3/gibasa/man/posDebugRcpp.Rd | 46 +- gibasa-0.9.3/gibasa/man/posParallelRcpp.Rd | 46 +- gibasa-0.9.3/gibasa/man/prettify.Rd | 74 +-- gibasa-0.9.3/gibasa/man/tokenize.Rd | 124 ++--- gibasa-0.9.3/gibasa/man/transition_cost.Rd | 42 - gibasa-0.9.3/gibasa/src/dictionary.cpp | 4 gibasa-0.9.3/gibasa/src/mmap.h | 2 gibasa-0.9.3/gibasa/tools/testdata.R | 72 +-- 36 files changed, 1078 insertions(+), 1063 deletions(-)
Title: Confidentiality of Spatial Point Data
Description: Provides an automatic aggregation tool to manage point data privacy,
intended to be helpful for the production of official spatial data and for researchers.
The package pursues the data accuracy at the smallest possible areas preventing
individual information disclosure. The methodology, based on hierarchical geographic
data structures performs aggregation and local suppression of point data to ensure privacy
as described in Lagonigro, R., Oller, R., Martori J.C. (2017) <doi:10.2436/20.8080.02.55>.
The data structures are created following the guidelines for grid datasets from the
European Forum for Geography and Statistics.
Author: Raymond Lagonigro [aut, cre] ,
Ramon Oller [aut] ,
Joan Carles Martori [aut]
Maintainer: Raymond Lagonigro <raymond.lagonigro@uvic.cat>
Diff between AQuadtree versions 1.0.2 dated 2020-09-08 and 1.0.3 dated 2023-04-20
AQuadtree-1.0.2/AQuadtree/inst/doc/AQuadtreeUse.html |only AQuadtree-1.0.3/AQuadtree/DESCRIPTION | 12 ++-- AQuadtree-1.0.3/AQuadtree/MD5 | 26 +++++----- AQuadtree-1.0.3/AQuadtree/NEWS | 6 ++ AQuadtree-1.0.3/AQuadtree/R/AQuadtree.R | 2 AQuadtree-1.0.3/AQuadtree/R/createGrid.R | 41 ++++------------ AQuadtree-1.0.3/AQuadtree/R/data.R | 2 AQuadtree-1.0.3/AQuadtree/build/vignette.rds |binary AQuadtree-1.0.3/AQuadtree/inst/doc/AQuadtreeUse.pdf |only AQuadtree-1.0.3/AQuadtree/man/AQuadtree-package.Rd | 2 AQuadtree-1.0.3/AQuadtree/man/BarcelonaCensusTracts.Rd | 4 + AQuadtree-1.0.3/AQuadtree/man/BarcelonaPop.Rd | 8 +-- AQuadtree-1.0.3/AQuadtree/man/CharlestonCensusTracts.Rd | 4 + AQuadtree-1.0.3/AQuadtree/man/CharlestonPop.Rd | 6 +- AQuadtree-1.0.3/AQuadtree/man/createGrid.Rd | 3 + 15 files changed, 57 insertions(+), 59 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-01-03 0.2.0
2016-08-03 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-11-22 1.0.0
2021-11-03 0.6.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-09-20 0.2.4
2019-05-03 0.2.3
2018-03-28 0.2.2
2016-10-10 0.2.1
2016-08-29 0.2.0
2016-04-21 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-04-05 0.1.2
2020-09-24 0.1.0.1
2020-08-18 0.1.0