Title: Fundamentos de estadística descriptiva e inferencial
Description: Este paquete pretende apoyar el proceso enseñanza-aprendizaje de estadística descriptiva e inferencial. Las funciones contenidas en el paquete 'estadistica' cubren los conceptos básicos estudiados en un curso introductorio. Muchos conceptos son ilustrados con gráficos dinámicos o web apps para facilitar su comprensión. This package aims to help the teaching-learning process of descriptive and inferential statistics. The functions contained in the package 'estadistica' cover the basic concepts studied in a statistics introductory course. Many concepts are illustrated with dynamic graphs or web apps to make the understanding easier. See: Esteban et al. (2005, ISBN: 9788497323741), Newbold et al.(2019, ISBN:9781292315034 ), Murgui et al. (2002, ISBN:9788484424673) .
Author: Vicente Coll-Serrano [aut, cre],
Rosario Martinez Verdu [aut]
Maintainer: Vicente Coll-Serrano <estadistic@uv.es>
Diff between estadistica versions 1.2.1 dated 2026-02-04 and 1.2.2 dated 2026-04-24
DESCRIPTION | 7 ++++--- MD5 | 2 +- 2 files changed, 5 insertions(+), 4 deletions(-)
Title: Web Framework Inspired by 'Express.js'
Description: A web framework inspired by 'express.js' to build
any web service from multi-page websites to 'RESTful'
application programming interfaces.
Author: John Coene [aut] ,
Opifex [fnd],
Kennedy Mwavu [cre] ,
Julio Collazos [ctb]
Maintainer: Kennedy Mwavu <mwavukennedy@gmail.com>
Diff between ambiorix versions 2.2.2 dated 2025-12-04 and 3.0.0 dated 2026-04-24
ambiorix-2.2.2/ambiorix/R/docker.R |only ambiorix-2.2.2/ambiorix/man/create_dockerfile.Rd |only ambiorix-3.0.0/ambiorix/DESCRIPTION | 15 ambiorix-3.0.0/ambiorix/MD5 | 35 - ambiorix-3.0.0/ambiorix/NAMESPACE | 1 ambiorix-3.0.0/ambiorix/NEWS.md | 21 ambiorix-3.0.0/ambiorix/R/assertions.R | 2 ambiorix-3.0.0/ambiorix/R/import.R | 2 ambiorix-3.0.0/ambiorix/R/render.R | 4 ambiorix-3.0.0/ambiorix/R/response.R | 264 ++++------- ambiorix-3.0.0/ambiorix/R/routing.R | 309 +++++--------- ambiorix-3.0.0/ambiorix/R/utils.R | 25 - ambiorix-3.0.0/ambiorix/R/websocket.R | 2 ambiorix-3.0.0/ambiorix/README.md | 45 +- ambiorix-3.0.0/ambiorix/man/Ambiorix.Rd | 7 ambiorix-3.0.0/ambiorix/man/Response.Rd | 133 ------ ambiorix-3.0.0/ambiorix/man/Router.Rd | 7 ambiorix-3.0.0/ambiorix/man/Routing.Rd | 260 +---------- ambiorix-3.0.0/ambiorix/man/routing-http-methods.Rd |only ambiorix-3.0.0/ambiorix/tests/testthat/_snaps/response.md | 8 20 files changed, 367 insertions(+), 773 deletions(-)
Title: Collaborative Filtering Models for Recommendation Systems
Description: Implements collaborative filtering methods for recommendation systems based on user-item interaction data. Supports both explicit feedback (ratings) and implicit feedback (consumption). The package uses efficient sparse matrix representations and provides incremental updates for users, items, and similarity structures through an R6 class-based architecture. See Aggarwal (2016) <doi:10.1007/978-3-319-29659-3> for an overview.
Author: Jessica Kubrusly [aut, cre] ,
Thiago Lima [ctb],
Lucas Oliveira [ctb],
Caio Salviano [ctb]
Maintainer: Jessica Kubrusly <jessicakubrusly@id.uff.br>
Diff between CFilt versions 0.3.0 dated 2024-10-04 and 1.0.0 dated 2026-04-24
CFilt-0.3.0/CFilt/R/CFilt.R |only CFilt-0.3.0/CFilt/R/estimaterating.R |only CFilt-0.3.0/CFilt/man/CF-class.Rd |only CFilt-0.3.0/CFilt/man/cosine.Rd |only CFilt-0.3.0/CFilt/man/estimaterating.Rd |only CFilt-0.3.0/CFilt/man/jaccard.Rd |only CFilt-0.3.0/CFilt/man/pearson.Rd |only CFilt-1.0.0/CFilt/DESCRIPTION | 28 CFilt-1.0.0/CFilt/LICENSE |only CFilt-1.0.0/CFilt/MD5 | 45 CFilt-1.0.0/CFilt/NAMESPACE | 14 CFilt-1.0.0/CFilt/NEWS.md |only CFilt-1.0.0/CFilt/R/CF.R | 2401 ++++++++++---------------------- CFilt-1.0.0/CFilt/R/CFbuilder.R | 865 ++++------- CFilt-1.0.0/CFilt/R/CFupdate.R |only CFilt-1.0.0/CFilt/R/cosine.R | 106 - CFilt-1.0.0/CFilt/R/jaccard.R | 42 CFilt-1.0.0/CFilt/R/kclosestitems.R | 100 - CFilt-1.0.0/CFilt/R/movies.R | 71 CFilt-1.0.0/CFilt/R/pearson.R | 95 - CFilt-1.0.0/CFilt/R/topkitems.R | 172 +- CFilt-1.0.0/CFilt/R/topkusers.R | 161 +- CFilt-1.0.0/CFilt/data/movies.RData |binary CFilt-1.0.0/CFilt/man/CF.Rd |only CFilt-1.0.0/CFilt/man/CFbuilder.Rd | 71 CFilt-1.0.0/CFilt/man/kclosestitems.Rd | 34 CFilt-1.0.0/CFilt/man/movies.Rd | 96 - CFilt-1.0.0/CFilt/man/topkitems.Rd | 57 CFilt-1.0.0/CFilt/man/topkusers.Rd | 57 29 files changed, 1672 insertions(+), 2743 deletions(-)
Title: A Future API for Parallel and Distributed Processing using
'batchtools'
Description: Implementation of the Future API <doi:10.32614/RJ-2021-048> on top of the 'batchtools' package.
This allows you to process futures, as defined by the 'future' package,
in parallel out of the box, not only on your local machine or ad-hoc
cluster of machines, but also via high-performance compute ('HPC') job
schedulers such as 'LSF', 'OpenLava', 'Slurm', 'SGE', and 'TORQUE' / 'PBS',
e.g. 'y <- future.apply::future_lapply(files, FUN = process)'.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Diff between future.batchtools versions 0.21.0 dated 2025-09-20 and 0.22.0 dated 2026-04-24
.Rinstignore |only DESCRIPTION | 10 MD5 | 162 ++++---- NAMESPACE | 1 NEWS.md | 35 + R/BatchtoolsFutureBackend-class.R | 16 R/BatchtoolsFutureError.R | 2 R/batchtools_bash.R | 8 R/batchtools_interactive.R | 2 R/batchtools_local.R | 10 R/batchtools_lsf.R | 4 R/batchtools_multicore.R | 6 R/batchtools_openlava.R | 6 R/batchtools_sge.R | 4 R/batchtools_slurm.R | 11 R/batchtools_ssh.R | 6 R/batchtools_torque.R | 10 R/makeClusterFutureSlurm2.R | 6 R/options.R | 4 R/utils,conditions.R | 8 R/utils.R | 10 build/vignette.rds |binary inst/doc/future.batchtools.html | 24 - inst/doc/future.batchtools.md.rsp | 16 inst/templates/bash.tmpl | 3 inst/templates/lsf.tmpl | 3 inst/templates/openlava.tmpl | 3 inst/templates/sge.tmpl | 3 inst/templates/slurm.tmpl | 3 inst/templates/torque.tmpl | 3 inst/testme/deploy.R | 2 inst/testme/run.R | 565 +++++++++++++++++------------ inst/testme/test-BatchtoolsFutureBackend.R |only inst/testme/test-BatchtoolsFutureError.R | 5 inst/testme/test-batchtools_custom.R | 2 inst/testme/test-batchtools_interactive.R | 2 inst/testme/test-batchtools_local.R | 2 inst/testme/test-batchtools_multicore.R | 6 inst/testme/test-globals,manual.R | 2 inst/testme/test-internals.R |only man/BatchtoolsFutureBackend.Rd | 8 man/BatchtoolsFutureError.Rd | 4 man/BatchtoolsMulticoreFutureBackend.Rd | 4 man/batchtools_bash.Rd | 11 man/batchtools_interactive.Rd | 3 man/batchtools_local.Rd | 3 man/batchtools_lsf.Rd | 8 man/batchtools_multicore.Rd | 3 man/batchtools_openlava.Rd | 12 man/batchtools_sge.Rd | 8 man/batchtools_slurm.Rd | 17 man/batchtools_ssh.Rd | 3 man/batchtools_torque.Rd | 14 man/makeClusterFunctionsSlurm2.Rd | 6 man/zzz-future.batchtools.options.Rd | 4 tests/test-BatchtoolsFuture,gc.R | 1 tests/test-BatchtoolsFuture.R | 1 tests/test-BatchtoolsFutureBackend.R |only tests/test-BatchtoolsFutureError.R | 1 tests/test-batchtools_bash.R | 1 tests/test-batchtools_custom.R | 1 tests/test-batchtools_hpc.R | 1 tests/test-batchtools_interactive.R | 1 tests/test-batchtools_local.R | 1 tests/test-batchtools_multicore.R | 1 tests/test-batchtools_ssh.R | 1 tests/test-batchtools_template.R | 1 tests/test-demo.R | 1 tests/test-dotdotdot.R | 1 tests/test-future,labels.R | 1 tests/test-future,lazy.R | 1 tests/test-globals,formulas.R | 1 tests/test-globals,manual.R | 1 tests/test-globals,subassignment.R | 1 tests/test-globals,tricky.R | 1 tests/test-internals.R |only tests/test-nbrOfWorkers.R | 1 tests/test-plan.R | 1 tests/test-resources_OP.R | 1 tests/test-rng.R | 1 tests/test-stdout.R | 1 tests/test-utils.R | 1 tests/test-zzz,future_lapply.R | 1 tests/test-zzz.onUnload.R | 1 vignettes/future.batchtools.md.rsp | 16 85 files changed, 694 insertions(+), 422 deletions(-)
More information about future.batchtools at CRAN
Permanent link
Title: Robust Inference for Covariate Adjustment in Randomized Clinical
Trials
Description: Performs robust estimation and inference when using covariate adjustment and/or covariate-adaptive randomization in randomized clinical trials.
Ting Ye, Jun Shao, Yanyao Yi, Qinyuan Zhao (2023) <doi:10.1080/01621459.2022.2049278>.
Ting Ye, Marlena Bannick, Yanyao Yi, Jun Shao (2023) <doi:10.1080/24754269.2023.2205802>.
Ting Ye, Jun Shao, Yanyao Yi (2023) <doi:10.1093/biomet/asad045>.
Marlena Bannick, Jun Shao, Jingyi Liu, Yu Du, Yanyao Yi, Ting Ye (2024) <doi:10.1093/biomet/asaf029>.
Xiaoyu Qiu, Yuhan Qian, Jaehwan Yi, Jinqiu Wang, Yu Du, Yanyao Yi, Ting Ye (2025) <doi:10.48550/arXiv.2408.12541>.
Author: Marlena Bannick [cre, aut] ,
Yuhan Qian [aut],
Ting Ye [aut],
Yanyao Yi [aut],
Faith Bian [aut]
Maintainer: Marlena Bannick <marlena.bannick@outlook.com>
Diff between RobinCar versions 1.1.0 dated 2026-01-28 and 1.2.0 dated 2026-04-24
DESCRIPTION | 6 +++--- MD5 | 26 ++++++++++++++------------ NEWS.md | 4 ++++ R/Data.R | 23 ++++++++++++++++++++++- R/adjust-logrank.R | 7 +++++-- R/adjust-tte.R | 5 +++++ R/model.R | 15 ++++++++++++++- R/robincar-covhr.R | 3 ++- R/robincar-logrank.R | 2 +- R/robincar-tte.R | 13 ++++++++----- build/partial.rdb |binary man/robincar_logrank.Rd | 2 +- man/robincar_tte.Rd | 8 +++++++- tests/testthat/test-inf-func.R |only tests/testthat/testthat-problems.rds |only 15 files changed, 86 insertions(+), 28 deletions(-)
More information about modelscompete4 at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2026-01-08 0.0.2
2025-12-19 0.0.1
Title: Rapid Asynchronous and Distributed Computing
Description: Package to tackle large-scale problems asynchronously across
a distributed network. Employing a database centric model, rush
enables workers to communicate tasks and their results over a shared
'Redis' database. Key features include low task overhead, efficient
caching, and robust error handling. The package powers the
asynchronous optimization algorithms in the 'bbotk' and 'mlr3tuning'
packages.
Author: Marc Becker [cre, aut, cph]
Maintainer: Marc Becker <marcbecker@posteo.de>
Diff between rush versions 1.0.1 dated 2026-04-04 and 1.1.0 dated 2026-04-24
DESCRIPTION | 6 - MD5 | 18 ++-- NEWS.md | 7 + R/Rush.R | 143 ++++++++++++++++++++------------------- R/RushWorker.R | 18 +++- R/start_worker.R | 16 ++-- R/sugar.R | 3 man/Rush.Rd | 4 - man/rsh.Rd | 4 - tests/testthat/test-RushWorker.R | 66 +++++++++++++++++- 10 files changed, 184 insertions(+), 101 deletions(-)
Title: Flexible Bayesian Optimization
Description: A modern and flexible approach to Bayesian Optimization / Model
Based Optimization building on the 'bbotk' package. 'mlr3mbo' is a toolbox
providing both ready-to-use optimization algorithms as well as their fundamental
building blocks allowing for straightforward implementation of custom
algorithms. Single- and multi-objective optimization is supported as well as
mixed continuous, categorical and conditional search spaces. Moreover, using
'mlr3mbo' for hyperparameter optimization of machine learning models within the
'mlr3' ecosystem is straightforward via 'mlr3tuning'. Examples of ready-to-use
optimization algorithms include Efficient Global Optimization by Jones et al.
(1998) <doi:10.1023/A:1008306431147>, ParEGO by Knowles (2006)
<doi:10.1109/TEVC.2005.851274> and SMS-EGO by Ponweiser et al. (2008)
<doi:10.1007/978-3-540-87700-4_78>.
Author: Marc Becker [cre, aut] ,
Lennart Schneider [aut] ,
Jakob Richter [aut] ,
Michel Lang [aut] ,
Bernd Bischl [aut] ,
Florian Pfisterer [aut] ,
Martin Binder [aut],
Sebastian Fischer [aut] ,
Michael H. Buselli [cph],
Wessel Dankers [cph],
Carlos Fonseca [...truncated...]
Maintainer: Marc Becker <marcbecker@posteo.de>
Diff between mlr3mbo versions 1.1.0 dated 2026-03-18 and 1.1.1 dated 2026-04-24
mlr3mbo-1.1.0/mlr3mbo/tests/testthat/helper_rush.R |only mlr3mbo-1.1.1/mlr3mbo/DESCRIPTION | 9 +- mlr3mbo-1.1.1/mlr3mbo/MD5 | 41 +++++------ mlr3mbo-1.1.1/mlr3mbo/NEWS.md | 7 + mlr3mbo-1.1.1/mlr3mbo/R/AcqFunctionEILog.R | 16 +++- mlr3mbo-1.1.1/mlr3mbo/R/AcqOptimizerDirect.R | 16 ++-- mlr3mbo-1.1.1/mlr3mbo/R/AcqOptimizerLbfgsb.R | 20 ++--- mlr3mbo-1.1.1/mlr3mbo/R/OptimizerADBO.R | 2 mlr3mbo-1.1.1/mlr3mbo/R/OptimizerAsyncMbo.R | 2 mlr3mbo-1.1.1/mlr3mbo/R/SurrogateLearner.R | 12 +-- mlr3mbo-1.1.1/mlr3mbo/R/SurrogateLearnerCollection.R | 12 +-- mlr3mbo-1.1.1/mlr3mbo/R/TunerADBO.R | 2 mlr3mbo-1.1.1/mlr3mbo/R/TunerAsyncMbo.R | 2 mlr3mbo-1.1.1/mlr3mbo/R/sugar.R | 2 mlr3mbo-1.1.1/mlr3mbo/build/partial.rdb |binary mlr3mbo-1.1.1/mlr3mbo/man/acqo.Rd | 3 mlr3mbo-1.1.1/mlr3mbo/man/mlr_optimizers_adbo.Rd | 2 mlr3mbo-1.1.1/mlr3mbo/man/mlr_optimizers_async_mbo.Rd | 2 mlr3mbo-1.1.1/mlr3mbo/man/mlr_tuners_adbo.Rd | 2 mlr3mbo-1.1.1/mlr3mbo/man/mlr_tuners_async_mbo.Rd | 2 mlr3mbo-1.1.1/mlr3mbo/tests/testthat/setup.R | 2 mlr3mbo-1.1.1/mlr3mbo/tests/testthat/test_AcqFunctionEILog.R | 8 ++ 22 files changed, 97 insertions(+), 67 deletions(-)
Title: Access and Manipulation of ILOSTAT Labour Statistics
Description: Provides functions to access and manipulate data from the
ILOSTAT database <https://ilostat.ilo.org>, the International Labour
Organization's repository of labour statistics. Supports bulk download
of datasets, metadata retrieval, and tools for filtering, reshaping,
and analysing data.
Author: David Bescond [aut, cre] ,
Mabelin Villarreal-Fuentes [ctb] ,
International Labour Organization [cph, fnd]
Maintainer: David Bescond <bescond@ilo.org>
Diff between Rilostat versions 2.3.4 dated 2025-10-01 and 2.5.0 dated 2026-04-24
DESCRIPTION | 35 ++-- LICENSE | 5 MD5 | 44 +++--- NAMESPACE | 17 +- NEWS.md | 8 + R/Rilostat.R | 18 +- R/check_version.R |only R/clean_ilostat_cache.R | 14 - R/data-internal.R | 5 R/distribution_ilostat.r | 62 +++++--- R/get_ilostat.R | 307 +++++++++++++++++++------------------------ R/get_ilostat_dic.R | 73 +++++++--- R/get_ilostat_toc.R | 187 ++++++++++++++------------ R/label_ilostat.R | 52 +++---- R/sysdata.rda |only R/zzz.R |only README.md | 6 man/Rilostat.Rd | 5 man/check_ilostat_version.Rd |only man/clean_ilostat_cache.Rd | 4 man/distribution_ilostat.Rd | 14 + man/get_ilostat.Rd | 65 ++++----- man/get_ilostat_dic.Rd | 9 + man/get_ilostat_toc.Rd | 44 +++--- man/label_ilostat.Rd | 2 25 files changed, 532 insertions(+), 444 deletions(-)
Title: Tidy Functional Data Wrangling and Visualization
Description: Represent, visualize, describe and wrangle functional data
in tidy data frames, building on the 'tf' package. Provides data types
for functional observations that work as columns in data frames,
enabling manipulation with 'dplyr' verbs and visualization with
'ggplot2' geoms designed for functional data.
Author: Fabian Scheipl [aut, cre, cph] ,
Jeff Goldsmith [aut],
Julia Wrobel [aut] ,
Maximilian Muecke [ctb]
Maintainer: Fabian Scheipl <fabian.scheipl@googlemail.com>
Diff between tidyfun versions 0.1.1 dated 2026-04-13 and 0.1.2 dated 2026-04-24
DESCRIPTION | 6 - MD5 | 54 +++++++-------- NEWS.md | 5 + data/chf_df.rda |binary inst/doc/x01_tf_Vectors.R | 4 - inst/doc/x01_tf_Vectors.Rmd | 4 - inst/doc/x01_tf_Vectors.html | 22 +++--- inst/doc/x02_Conversion.R | 2 inst/doc/x02_Conversion.Rmd | 2 inst/doc/x02_Conversion.html | 12 +-- inst/doc/x03_Data_Wrangling.R | 2 inst/doc/x03_Data_Wrangling.Rmd | 2 inst/doc/x03_Data_Wrangling.html | 28 ++++---- inst/doc/x04_Visualization.R | 2 inst/doc/x04_Visualization.Rmd | 4 - inst/doc/x04_Visualization.html | 66 +++++++++---------- inst/doc/x05_Advice.R | 2 inst/doc/x05_Advice.Rmd | 2 inst/doc/x05_Advice.html | 4 - inst/doc/x06_Registration.R | 12 ++- inst/doc/x06_Registration.Rmd | 70 ++++++++++---------- inst/doc/x06_Registration.html | 135 +++++++++++++++++++-------------------- vignettes/x01_tf_Vectors.Rmd | 4 - vignettes/x02_Conversion.Rmd | 2 vignettes/x03_Data_Wrangling.Rmd | 2 vignettes/x04_Visualization.Rmd | 4 - vignettes/x05_Advice.Rmd | 2 vignettes/x06_Registration.Rmd | 70 ++++++++++---------- 28 files changed, 283 insertions(+), 241 deletions(-)
Title: Simulation of Matrix Population Models with Defined Life History
Characteristics
Description: Allows users to simulate matrix population models with
particular characteristics based on aspects of life history such as
mortality trajectories and fertility trajectories. Also allows the
exploration of sampling error due to small sample size.
Author: Owen Jones [aut, cre]
Maintainer: Owen Jones <jones@biology.sdu.dk>
Diff between mpmsim versions 3.2.1 dated 2025-06-05 and 3.3.0 dated 2026-04-24
DESCRIPTION | 6 +- MD5 | 42 ++++++++-------- NEWS.md | 7 ++ R/add_mpm_error.R | 3 - R/calculate_errors.R | 2 R/model_reproduction.R | 2 R/plot_matrix.R | 1 R/rand_leslie_set.R | 73 ++++++++++++++--------------- R/vital_rate_driver_simulation.R | 4 - README.md | 5 + build/partial.rdb |binary build/vignette.rds |binary inst/doc/generating_lefkovitch_models.html | 9 +-- inst/doc/generating_leslie_models.Rmd | 4 - inst/doc/generating_leslie_models.html | 18 +++---- inst/doc/sampling_error_propagation.html | 9 +-- man/model_fecundity.Rd | 2 tests/testthat/test-add_mpm_error.R | 2 tests/testthat/test-compute_ci.R | 1 tests/testthat/test-rand_lefko_set.R | 2 tests/testthat/test-rand_leslie_set.R | 1 vignettes/generating_leslie_models.Rmd | 4 - 22 files changed, 97 insertions(+), 100 deletions(-)
Title: Scholarly and Academic Identifier Utilities
Description: Detects, normalizes, classifies, and extracts scholarly identifier
strings. Provides lightweight, dependency-free helpers for common
identifier systems such as DOIs, ORCID iDs, ISBNs, ISSNs, arXiv
identifiers, and PubMed identifiers. Functions are vectorized,
predictable, and suitable as low-level building blocks for other R
packages and data workflows. For online lookup, conversion, metadata
retrieval, and linked identifier discovery, see 'scholidonline'.
Author: Thomas Rauter [aut, cre, fnd]
Maintainer: Thomas Rauter <rauterthomas0@gmail.com>
Diff between scholid versions 0.1.0 dated 2026-02-13 and 0.1.1 dated 2026-04-24
DESCRIPTION | 24 - MD5 | 42 +- NEWS.md | 13 R/detect_scholid_type.R | 38 + R/extract_scholid.R | 399 +++++++++++++++++++- R/is_idtype_functions.R | 136 ++++++- R/normalize_scholid.R | 151 ++++++- R/scholid_registry.R | 5 README.md | 21 - build/vignette.rds |binary inst/WORDLIST | 6 inst/doc/get_started.R | 3 inst/doc/get_started.Rmd | 6 inst/doc/get_started.html | 40 -- man/extract_scholid.Rd | 6 man/normalize_scholid.Rd | 16 tests/testthat.R | 3 tests/testthat/test-detect_scholid_type.R | 61 +++ tests/testthat/test-extract_scholid.R | 579 +++++++++++++++++++++++++++++- tests/testthat/test-is_scholid.R | 136 +++++++ tests/testthat/test-normalize_scholid.R | 457 +++++++++++++++++++++++ vignettes/get_started.Rmd | 6 22 files changed, 1967 insertions(+), 181 deletions(-)
Title: R Graphics Devices for 'Office' Vector Graphics Output
Description: Vector Graphics devices for 'Microsoft PowerPoint' and
'Microsoft Excel'. Functions extending package 'officer' are provided
to embed 'DrawingML' graphics into 'Microsoft PowerPoint'
presentations and 'Microsoft Excel' workbooks.
Author: David Gohel [aut, cre],
ArData [cph],
Bob Rudis [ctb] ,
Francois Brunetti [ctb]
Maintainer: David Gohel <david.gohel@ardata.fr>
Diff between rvg versions 0.4.1 dated 2026-02-16 and 0.4.2 dated 2026-04-24
DESCRIPTION | 8 +- MD5 | 20 ++++--- NAMESPACE | 10 ++- NEWS.md | 26 +++++++++ R/sheet_add_drawing_dml.R |only R/xl_add_vg.R | 104 +++++--------------------------------- README.md | 29 ++++++---- man/sheet_add_drawing.dml.Rd |only man/xl_add_vg.Rd | 8 +- src/pptx.cpp | 6 +- src/xlsx.cpp | 6 +- tests/testthat/test-xlsx-raster.R | 13 +++- 12 files changed, 103 insertions(+), 127 deletions(-)
Title: Collection of Utility Functions for Data Analysis and Computing
Description: Provides utility functions for data analysis and computing. Includes functions for logging, parallel processing, and other computational tasks to streamline workflows.
Author: Meng Xu [aut, cre]
Maintainer: Meng Xu <mengxu98@qq.com>
Diff between thisutils versions 0.4.4 dated 2026-04-02 and 0.4.5 dated 2026-04-24
DESCRIPTION | 12 - MD5 | 40 +-- NAMESPACE | 1 NEWS.md | 22 + R/computation.R | 70 +++++- R/lisi.R | 89 +++----- R/log_message.R | 230 +++++++++++++------- R/package_management.R | 17 - R/parallelize_fun.R | 332 +++++++++++++++++++++++------- R/sparse_matrix_tools.R |only R/thisutils-package.R | 3 man/collapse_sparse_rows.Rd |only man/compute_lisi.Rd | 16 - man/log_message.Rd | 3 src/matrix_to_table.cpp | 125 ++++------- src/table_to_matrix.cpp | 41 +++ tests/testthat/test-computation.R | 10 tests/testthat/test-lisi.R | 175 +++++++++++++++ tests/testthat/test-log_message.R | 76 ++++++ tests/testthat/test-matrix.R | 78 +++++++ tests/testthat/test-package-startup.R |only tests/testthat/test-parallelize_fun.R | 55 ++++ tests/testthat/test-sparse_matrix_tools.R |only 23 files changed, 1060 insertions(+), 335 deletions(-)
Title: Utility Functions for Plotting
Description: Provides utility functions for plotting. Includes functions for color manipulation, plot customization, panel size control, data optimization for plots, and layout adjustments.
Author: Meng Xu [aut, cre]
Maintainer: Meng Xu <mengxu98@qq.com>
Diff between thisplot versions 0.3.7 dated 2026-04-02 and 0.3.8 dated 2026-04-24
DESCRIPTION | 13 MD5 | 39 - NAMESPACE | 4 NEWS.md | 22 R/StatPlot.R | 23 R/chinese_colors.R | 5 R/data.R | 3 R/palettes.R | 18 R/plot.R | 222 +++++++ R/reexports.R | 5 R/utils.R | 23 R/visual_colors.R | 184 +++++- README.md | 1104 +++++++++++++++++++-------------------- data/chinese_colors.rda |binary man/ChineseColors.Rd | 2 man/StatPlot.Rd | 13 man/annotate_quadrants.Rd |only man/chinese_colors.Rd | 3 man/clip_symmetric_range.Rd |only man/jitter_highlighted_points.Rd |only man/normalize_to_sum.Rd |only man/to_percent.Rd |only man/visual_colors.Rd | 12 23 files changed, 1076 insertions(+), 619 deletions(-)
Title: A Blazing Fast Implementation of Random Forest
Description: Yet another implementation of the Random Forest method by Breiman (2001) <doi:10.1023/A:1010933404324>, written in Rust and tailored towards stability, correctness, efficiency and scalability on modern multi-core machines.
Handles both classification and regression, as well as provides permutation feature importance via a novel, highly optimised algorithm.
Author: Miron Bartosz Kursa [aut, cre] ,
Krzysztof Piotr Piwonski [aut]
Maintainer: Miron Bartosz Kursa <m@mbq.me>
Diff between fru versions 0.0.5 dated 2026-04-03 and 0.0.6 dated 2026-04-24
DESCRIPTION | 6 +++--- MD5 | 13 +++++++------ inst/NEWS | 4 ++++ src/fru/Cargo.lock | 4 ++-- src/fru/vendor.tar.xz |only src/xrf/Cargo.lock | 2 +- src/xrf/Cargo.toml | 2 +- src/xrf/src/forest.rs | 8 ++++---- 8 files changed, 22 insertions(+), 17 deletions(-)
Title: Automatic Univariate Time Series Modelling of many Kinds
Description: Comprehensive analysis and forecasting
of univariate time series using automatic
time series models of many kinds.
Harvey AC (1989) <doi:10.1017/CBO9781107049994>.
Pedregal DJ and Young PC (2002) <doi:10.1002/9780470996430>.
Durbin J and Koopman SJ (2012) <doi:10.1093/acprof:oso/9780199641178.001.0001>.
Hyndman RJ, Koehler AB, Ord JK, and Snyder RD (2008) <doi:10.1007/978-3-540-71918-2>.
Gómez V, Maravall A (2000) <doi:10.1002/9781118032978>.
Pedregal DJ, Trapero JR and Holgado E (2024) <doi:10.1016/j.ijforecast.2023.09.004>.
Author: Diego J. Pedregal [aut, cre]
Maintainer: Diego J. Pedregal <diego.pedregal@uclm.es>
Diff between UComp versions 5.1.9 dated 2026-04-08 and 5.2 dated 2026-04-24
ChangeLog | 2 +- DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- src/BSMmodel.h | 7 +------ src/stats.h | 3 ++- 5 files changed, 12 insertions(+), 16 deletions(-)
Title: Pan-European Phenological Data Analysis
Description: Provides a framework for quality-aware analysis of ground-based
phenological data from the PEP725 Pan-European Phenology Database
(Templ et al. (2018) <doi:10.1007/s00484-018-1512-8>;
Templ et al. (2026) <doi:10.1111/nph.70869>) and similar observation
networks. Implements station-level data quality grading, outlier
detection, phenological normals (climate baselines), anomaly detection,
elevation and latitude gradient estimation with robust regression,
spatial synchrony quantification, partial least squares (PLS) regression
for identifying temperature-sensitive periods, and sequential
Mann-Kendall trend analysis. Supports data import from PEP725 files,
conversion of user-supplied data, and downloadable synthetic datasets
for teaching without barriers of registration.
All analysis outputs provide 'print', 'summary', and
'plot' methods. Interactive spatial visualization is available via
'leaflet'.
Author: Matthias Templ [aut, cre] ,
Barbara Templ [aut]
Maintainer: Matthias Templ <matthias.templ@gmail.com>
Diff between pep725 versions 1.0.2 dated 2026-03-31 and 1.1.0 dated 2026-04-24
DESCRIPTION | 11 MD5 | 88 +- NAMESPACE | 2 NEWS.md | 99 ++ R/calc_daylength.R | 61 + R/calc_thermal_units.R | 34 R/data_documentation.R | 2 R/pep_flag_outliers.R | 217 ++++ R/pep_outliers_leaflet.R |only R/pep_plot_outliers.R | 281 ++++++ R/pheno_combine.R | 7 R/pheno_map.R | 6 R/pheno_normals.R | 160 ++- R/pheno_timeseries.R | 4 R/pheno_trend_turning.R | 217 +++- README.md | 4 inst/doc/data-quality.R | 41 inst/doc/data-quality.Rmd | 160 +++ inst/doc/data-quality.html | 874 ++++++++++++-------- inst/doc/getting-started.Rmd | 6 inst/doc/getting-started.html | 12 inst/doc/phenological-analysis.R | 12 inst/doc/phenological-analysis.Rmd | 14 inst/doc/phenological-analysis.html | 79 - inst/doc/spatial-patterns.html | 34 man/calc_daylength.Rd | 40 man/calc_thermal_units.Rd | 19 man/kendall_tau.Rd | 27 man/mann_kendall_z.Rd |only man/pep_flag_outliers.Rd | 46 + man/pep_outliers_leaflet.Rd |only man/pep_plot_outliers.Rd | 20 man/pep_seed.Rd | 2 man/pheno_map.Rd | 2 man/pheno_normals.Rd | 8 man/sequential_mk.Rd | 40 tests/testthat/test-calc_daylength_method.R |only tests/testthat/test-calc_thermal_units.R | 66 + tests/testthat/test-kendall_tau.R | 68 + tests/testthat/test-pep_flag_outliers_gam.R |only tests/testthat/test-pep_flag_outliers_mahalanobis.R |only tests/testthat/test-pep_outliers_leaflet.R |only tests/testthat/test-pheno_normals.R | 47 + tests/testthat/test-pheno_plot_timeseries.R |only tests/testthat/test-sequential_mk.R |only vignettes/data-quality.Rmd | 160 +++ vignettes/figures |only vignettes/getting-started.Rmd | 6 vignettes/phenological-analysis.Rmd | 14 49 files changed, 2316 insertions(+), 674 deletions(-)
Title: Compute SHAP Values for Your Tree-Based Models Using the
'TreeSHAP' Algorithm
Description: An efficient implementation of the 'TreeSHAP' algorithm
introduced by Lundberg et al., (2020) <doi:10.1038/s42256-019-0138-9>.
It is capable of calculating SHAP (SHapley Additive exPlanations) values
for tree-based models in polynomial time. Currently supported models include
'gbm', 'randomForest', 'ranger', 'xgboost', 'lightgbm'.
Author: Michael Mayer [aut, cre],
Konrad Komisarczyk [aut],
Pawel Kozminski [aut],
Szymon Maksymiuk [aut] ,
Lorenz A. Kapsner [ctb] ,
Mikolaj Spytek [ctb] ,
Mateusz Krzyzinski [ctb] ,
Przemyslaw Biecek [aut, cph]
Maintainer: Michael Mayer <mayermichael79@gmail.com>
This is a re-admission after prior archival of version 0.3.1 dated 2024-01-22
Diff between treeshap versions 0.3.1 dated 2024-01-22 and 0.4.0 dated 2026-04-24
treeshap-0.3.1/treeshap/R/globals.R |only treeshap-0.4.0/treeshap/DESCRIPTION | 35 - treeshap-0.4.0/treeshap/MD5 | 109 +-- treeshap-0.4.0/treeshap/NAMESPACE | 88 +- treeshap-0.4.0/treeshap/NEWS.md |only treeshap-0.4.0/treeshap/R/RcppExports.R | 38 - treeshap-0.4.0/treeshap/R/fifa20.R | 46 - treeshap-0.4.0/treeshap/R/model_unified.R | 242 +++---- treeshap-0.4.0/treeshap/R/plot_contribution.R | 40 - treeshap-0.4.0/treeshap/R/plot_feature_dependence.R | 37 - treeshap-0.4.0/treeshap/R/plot_feature_importance.R | 36 - treeshap-0.4.0/treeshap/R/plot_interaction.R | 32 treeshap-0.4.0/treeshap/R/predict.R | 146 ++-- treeshap-0.4.0/treeshap/R/set_reference_dataset.R | 195 ++--- treeshap-0.4.0/treeshap/R/theme_drwhy.R | 174 +++-- treeshap-0.4.0/treeshap/R/treeshap.R | 71 +- treeshap-0.4.0/treeshap/R/unify.R | 184 +++-- treeshap-0.4.0/treeshap/R/unify_gbm.R | 187 ++--- treeshap-0.4.0/treeshap/R/unify_gpboost.R |only treeshap-0.4.0/treeshap/R/unify_lightgbm.R | 107 ++- treeshap-0.4.0/treeshap/R/unify_randomForest.R | 234 ++++-- treeshap-0.4.0/treeshap/R/unify_ranger.R | 177 ++--- treeshap-0.4.0/treeshap/R/unify_ranger_surv.R | 337 ++++------ treeshap-0.4.0/treeshap/R/unify_xgboost.R | 105 ++- treeshap-0.4.0/treeshap/R/zzz.R |only treeshap-0.4.0/treeshap/man/colors_drwhy.Rd | 40 - treeshap-0.4.0/treeshap/man/fifa20.Rd | 64 - treeshap-0.4.0/treeshap/man/gbm.unify.Rd | 95 +- treeshap-0.4.0/treeshap/man/gpboost.unify.Rd |only treeshap-0.4.0/treeshap/man/is.model_unified.Rd | 34 - treeshap-0.4.0/treeshap/man/is.treeshap.Rd | 34 - treeshap-0.4.0/treeshap/man/lightgbm.unify.Rd | 102 +-- treeshap-0.4.0/treeshap/man/model_unified.object.Rd | 66 - treeshap-0.4.0/treeshap/man/model_unified_multioutput.object.Rd | 28 treeshap-0.4.0/treeshap/man/plot_contribution.Rd | 130 ++- treeshap-0.4.0/treeshap/man/plot_feature_dependence.Rd | 101 +- treeshap-0.4.0/treeshap/man/plot_feature_importance.Rd | 105 +-- treeshap-0.4.0/treeshap/man/plot_interaction.Rd | 104 +-- treeshap-0.4.0/treeshap/man/predict.model_unified.Rd | 76 +- treeshap-0.4.0/treeshap/man/print.model_unified.Rd | 38 - treeshap-0.4.0/treeshap/man/print.model_unified_multioutput.Rd | 38 - treeshap-0.4.0/treeshap/man/print.treeshap.Rd | 38 - treeshap-0.4.0/treeshap/man/print.treeshap_multioutput.Rd | 38 - treeshap-0.4.0/treeshap/man/randomForest.unify.Rd | 110 +-- treeshap-0.4.0/treeshap/man/ranger.unify.Rd | 87 +- treeshap-0.4.0/treeshap/man/ranger_surv.unify.Rd | 183 ++--- treeshap-0.4.0/treeshap/man/set_reference_dataset.Rd | 101 +- treeshap-0.4.0/treeshap/man/theme_drwhy.Rd | 34 - treeshap-0.4.0/treeshap/man/treeshap.Rd | 134 ++- treeshap-0.4.0/treeshap/man/treeshap.object.Rd | 44 - treeshap-0.4.0/treeshap/man/treeshap_multioutput.object.Rd | 32 treeshap-0.4.0/treeshap/man/unify.Rd | 124 ++- treeshap-0.4.0/treeshap/man/xgboost.unify.Rd | 96 +- treeshap-0.4.0/treeshap/tests |only 54 files changed, 2541 insertions(+), 2155 deletions(-)
Title: Cubature over Polygonal Domains
Description: Numerical integration of continuously differentiable
functions f(x,y) over simple closed polygonal domains.
The following cubature methods are implemented:
product Gauss cubature (Sommariva and Vianello, 2007,
<doi:10.1007/s10543-007-0131-2>),
the simple two-dimensional midpoint rule
(wrapping 'spatstat.geom' functions), and
adaptive cubature for radially symmetric functions via line
integrate() along the polygon boundary (Meyer and Held, 2014,
<doi:10.1214/14-AOAS743>, Supplement B).
For simple integration along the axes, the 'cubature' package
is more appropriate.
Author: Sebastian Meyer [aut, cre, trl] ,
Leonhard Held [ths],
Michael Hoehle [ths]
Maintainer: Sebastian Meyer <seb.meyer@fau.de>
Diff between polyCub versions 0.9.3 dated 2026-04-11 and 0.9.4 dated 2026-04-24
polyCub-0.9.3/polyCub/man/gpclibPermit.Rd |only polyCub-0.9.4/polyCub/DESCRIPTION | 8 +-- polyCub-0.9.4/polyCub/MD5 | 61 +++++++++++------------ polyCub-0.9.4/polyCub/NAMESPACE | 2 polyCub-0.9.4/polyCub/NEWS.md | 20 ++++--- polyCub-0.9.4/polyCub/R/circleCub.R | 11 ++-- polyCub-0.9.4/polyCub/R/coerce-sp-methods.R | 20 +++---- polyCub-0.9.4/polyCub/R/plotpolyf.R | 4 - polyCub-0.9.4/polyCub/R/polyCub.R | 2 polyCub-0.9.4/polyCub/R/polyCub.SV.R | 2 polyCub-0.9.4/polyCub/R/polyCub.exact.Gauss.R | 20 +++---- polyCub-0.9.4/polyCub/R/polyCub.iso.R | 41 +++++++++------ polyCub-0.9.4/polyCub/R/polyCub.midpoint.R | 2 polyCub-0.9.4/polyCub/R/xylist.R | 6 +- polyCub-0.9.4/polyCub/R/zzz.R | 41 +++------------ polyCub-0.9.4/polyCub/build/partial.rdb |binary polyCub-0.9.4/polyCub/inst/CITATION | 5 - polyCub-0.9.4/polyCub/inst/REFERENCES.R | 29 +++++----- polyCub-0.9.4/polyCub/inst/doc/polyCub.Rmd | 3 - polyCub-0.9.4/polyCub/inst/doc/polyCub.html | 14 ++--- polyCub-0.9.4/polyCub/man/checkintrfr.Rd | 29 +++++++--- polyCub-0.9.4/polyCub/man/circleCub.Gauss.Rd | 9 ++- polyCub-0.9.4/polyCub/man/coerce-sp-methods.Rd | 27 +++++----- polyCub-0.9.4/polyCub/man/plotpolyf.Rd | 4 - polyCub-0.9.4/polyCub/man/polyCub-package.Rd | 16 +++--- polyCub-0.9.4/polyCub/man/polyCub.Rd | 5 - polyCub-0.9.4/polyCub/man/polyCub.SV.Rd | 5 - polyCub-0.9.4/polyCub/man/polyCub.exact.Gauss.Rd | 26 --------- polyCub-0.9.4/polyCub/man/polyCub.iso.Rd | 13 ++-- polyCub-0.9.4/polyCub/man/polyCub.midpoint.Rd | 5 - polyCub-0.9.4/polyCub/man/xylist.Rd | 11 ++++ polyCub-0.9.4/polyCub/vignettes/polyCub.Rmd | 3 - 32 files changed, 220 insertions(+), 224 deletions(-)
Title: Manipulation of Microsoft Word and PowerPoint Documents
Description: Access and manipulate 'Microsoft Word', 'RTF' and 'Microsoft
PowerPoint' documents from R. The package focuses on tabular and
graphical reporting from R; it also provides two functions that let
users get document content into data objects. A set of functions lets
add and remove images, tables and paragraphs of text in new or
existing documents. The package does not require any installation of
Microsoft products to be able to write Microsoft files.
Author: David Gohel [aut, cre],
Stefan Moog [aut],
Mark Heckmann [aut] ,
ArData [cph],
Frank Hangler [ctb] ,
Liz Sander [ctb] ,
Anton Victorson [ctb] ,
Jon Calder [ctb] ,
John Harrold [ctb] ,
John Muschelli [ctb] ,
Bill Denney [ctb] ,
Nikolai Beck [ctb] ,
Gr [...truncated...]
Maintainer: David Gohel <david.gohel@ardata.fr>
Diff between officer versions 0.7.3 dated 2026-01-16 and 0.7.4 dated 2026-04-24
officer-0.7.3/officer/inst/examples |only officer-0.7.4/officer/DESCRIPTION | 18 officer-0.7.4/officer/MD5 | 175 - officer-0.7.4/officer/NAMESPACE | 22 officer-0.7.4/officer/NEWS.md | 47 officer-0.7.4/officer/R/core_properties.R | 2 officer-0.7.4/officer/R/defunct.R | 2 officer-0.7.4/officer/R/dev-utils.R | 4 officer-0.7.4/officer/R/docx_add.R | 65 officer-0.7.4/officer/R/docx_append_context.R | 8 officer-0.7.4/officer/R/docx_comments.R | 2 officer-0.7.4/officer/R/docx_embed_font.R |only officer-0.7.4/officer/R/docx_section.R | 17 officer-0.7.4/officer/R/docx_settings.R | 120 - officer-0.7.4/officer/R/docx_styles.R | 6 officer-0.7.4/officer/R/docx_write.R | 84 officer-0.7.4/officer/R/formatting_properties.R | 40 officer-0.7.4/officer/R/fortify_pptx.R | 40 officer-0.7.4/officer/R/ooxml.R | 46 officer-0.7.4/officer/R/ooxml_block_objects.R | 191 + officer-0.7.4/officer/R/ooxml_run_objects.R | 12 officer-0.7.4/officer/R/pack_folder.R | 4 officer-0.7.4/officer/R/ph_location.R | 5 officer-0.7.4/officer/R/post-proc.R | 137 + officer-0.7.4/officer/R/ppt_notes.R | 2 officer-0.7.4/officer/R/ppt_ph_dedupe_layout.R | 9 officer-0.7.4/officer/R/ppt_ph_with_methods.R | 37 officer-0.7.4/officer/R/pptx_informations.R | 20 officer-0.7.4/officer/R/pptx_layout_helper.R | 7 officer-0.7.4/officer/R/read_xlsx.R | 1473 +++++++++++++- officer-0.7.4/officer/R/relationship.R | 2 officer-0.7.4/officer/R/rtf.R | 14 officer-0.7.4/officer/R/utils.R | 54 officer-0.7.4/officer/man/add_sheet.Rd | 7 officer-0.7.4/officer/man/block_caption.Rd | 2 officer-0.7.4/officer/man/block_gg.Rd | 2 officer-0.7.4/officer/man/block_list.Rd | 2 officer-0.7.4/officer/man/block_list_items.Rd |only officer-0.7.4/officer/man/block_pour_docx.Rd | 2 officer-0.7.4/officer/man/block_section.Rd | 2 officer-0.7.4/officer/man/block_table.Rd | 2 officer-0.7.4/officer/man/block_toc.Rd | 2 officer-0.7.4/officer/man/body_add.Rd | 5 officer-0.7.4/officer/man/body_add_blocks.Rd | 1 officer-0.7.4/officer/man/body_add_break.Rd | 1 officer-0.7.4/officer/man/body_add_caption.Rd | 1 officer-0.7.4/officer/man/body_add_docx.Rd | 1 officer-0.7.4/officer/man/body_add_fpar.Rd | 1 officer-0.7.4/officer/man/body_add_gg.Rd | 1 officer-0.7.4/officer/man/body_add_img.Rd | 1 officer-0.7.4/officer/man/body_add_list.Rd |only officer-0.7.4/officer/man/body_add_par.Rd | 1 officer-0.7.4/officer/man/body_add_plot.Rd | 1 officer-0.7.4/officer/man/body_add_table.Rd | 1 officer-0.7.4/officer/man/body_add_toc.Rd | 1 officer-0.7.4/officer/man/body_append_context.Rd | 1 officer-0.7.4/officer/man/body_import_docx.Rd | 1 officer-0.7.4/officer/man/docx_embed_font.Rd |only officer-0.7.4/officer/man/fp_par.Rd | 16 officer-0.7.4/officer/man/fpar.Rd | 2 officer-0.7.4/officer/man/list_item.Rd |only officer-0.7.4/officer/man/ph_with.Rd | 6 officer-0.7.4/officer/man/plot_instr.Rd | 2 officer-0.7.4/officer/man/plot_layout_properties.Rd | 2 officer-0.7.4/officer/man/sheet_add_drawing.Rd |only officer-0.7.4/officer/man/sheet_names.Rd |only officer-0.7.4/officer/man/sheet_remove.Rd |only officer-0.7.4/officer/man/sheet_write_data.Rd |only officer-0.7.4/officer/man/unordered_list.Rd | 6 officer-0.7.4/officer/man/xlsx_drawing.Rd |only officer-0.7.4/officer/man/xlsx_styles.Rd |only officer-0.7.4/officer/tests/testthat/test-block_list.R | 198 + officer-0.7.4/officer/tests/testthat/test-docx_settings.R | 137 + officer-0.7.4/officer/tests/testthat/test-fp_par.R | 76 officer-0.7.4/officer/tests/testthat/test-xlsx.R | 782 +++++++ 75 files changed, 3617 insertions(+), 314 deletions(-)
Title: Historical and Ahistorical Population Projection Matrix Analysis
Description: Complete analytical environment for the construction and analysis
of matrix population models and integral projection models.
Includes the ability to construct historical matrices, which are
2d matrices comprising 3 consecutive times of demographic
information. Estimates both raw and function-based forms of
historical and standard ahistorical matrices. It also estimates
function-based age-by-stage matrices and raw and function-based
Leslie matrices.
Author: Richard P. Shefferson [aut, cre] ,
Johan Ehrlen [aut]
Maintainer: Richard P. Shefferson <cdorm@g.ecc.u-tokyo.ac.jp>
Diff between lefko3 versions 6.7.2 dated 2026-02-11 and 6.7.3 dated 2026-04-24
DESCRIPTION | 8 MD5 | 36 ++-- NEWS.md | 23 ++ R/RcppExports.R | 12 + R/popchar.R | 11 - build/vignette.rds |binary inst/doc/Chapter1.html | 284 ++++++++++++++++------------------ inst/doc/Chapter2.html | 28 +-- inst/doc/Chapter5.html | 25 +- inst/doc/Chapter6.html | 3 inst/doc/Chapter8.html | 20 +- inst/doc/Chapter9.html | 17 -- inst/include/basic_funcs/main_utils.h | 152 ++++++++++-------- man/bootstrap3.Rd | 3 man/lambda3.Rd | 8 src/DataManagement.cpp | 180 ++++++++++++++++++++- src/MatsNProj.cpp | 24 ++ src/PopDyn2.cpp | 71 ++++++++ src/RcppExports.cpp | 9 - 19 files changed, 609 insertions(+), 305 deletions(-)
Title: Simulation and Analysis of Event History Data
Description: Simulate event history data from a framework where treatment decisions
and disease progression are represented as counting process. The user can specify
number of events and parameters of intensities thereby creating a flexible
simulation framework.
Author: Michaela Lukacova [aut, cre]
Maintainer: Michaela Lukacova <michaela.lukacova@sund.ku.dk>
Diff between simevent versions 0.1.0 dated 2026-02-11 and 0.1.1 dated 2026-04-24
simevent-0.1.0/simevent/R/alphaSimDisease.R |only simevent-0.1.0/simevent/R/alphaSimDropIn.R |only simevent-0.1.0/simevent/R/alphaSimTreat.R |only simevent-0.1.0/simevent/R/intEffectAlphaDisease.R |only simevent-0.1.0/simevent/R/intEffectAlphaDropIn.R |only simevent-0.1.0/simevent/R/intEffectAlphaTreat.R |only simevent-0.1.0/simevent/man/alphaSimDisease.Rd |only simevent-0.1.0/simevent/man/alphaSimDropIn.Rd |only simevent-0.1.0/simevent/man/alphaSimTreat.Rd |only simevent-0.1.0/simevent/man/intEffectAlphaDisease.Rd |only simevent-0.1.0/simevent/man/intEffectAlphaDropIn.Rd |only simevent-0.1.0/simevent/man/intEffectAlphaTreat.Rd |only simevent-0.1.1/simevent/DESCRIPTION | 6 simevent-0.1.1/simevent/MD5 | 62 +++---- simevent-0.1.1/simevent/NAMESPACE | 9 - simevent-0.1.1/simevent/NEWS.md |only simevent-0.1.1/simevent/R/alphaSim.R |only simevent-0.1.1/simevent/R/intEffectAlpha.R |only simevent-0.1.1/simevent/R/simEventCox.R | 40 +++- simevent-0.1.1/simevent/R/simEventData.R | 29 ++- simevent-0.1.1/simevent/R/simEventObj.R | 4 simevent-0.1.1/simevent/R/simStatinData.R |only simevent-0.1.1/simevent/README.md | 83 +++++----- simevent-0.1.1/simevent/man/alphaSim.Rd |only simevent-0.1.1/simevent/man/figures/README-unnamed-chunk-18-1.png |binary simevent-0.1.1/simevent/man/figures/README-unnamed-chunk-20-1.png |binary simevent-0.1.1/simevent/man/figures/README-unnamed-chunk-21-1.png |binary simevent-0.1.1/simevent/man/figures/README-unnamed-chunk-22-1.png |binary simevent-0.1.1/simevent/man/figures/README-unnamed-chunk-23-1.png |binary simevent-0.1.1/simevent/man/figures/README-unnamed-chunk-24-1.png |binary simevent-0.1.1/simevent/man/figures/README-unnamed-chunk-25-1.png |binary simevent-0.1.1/simevent/man/figures/README-unnamed-chunk-26-1.png |binary simevent-0.1.1/simevent/man/figures/README-unnamed-chunk-27-1.png |binary simevent-0.1.1/simevent/man/figures/README-unnamed-chunk-28-1.png |binary simevent-0.1.1/simevent/man/figures/README-unnamed-chunk-29-1.png |only simevent-0.1.1/simevent/man/intEffectAlpha.Rd |only simevent-0.1.1/simevent/man/simEventCox.Rd | 21 +- simevent-0.1.1/simevent/man/simEventData.Rd | 3 simevent-0.1.1/simevent/man/simEventObj.Rd | 4 simevent-0.1.1/simevent/man/simStatinData.Rd |only simevent-0.1.1/simevent/tests/testthat/test-override_beta.R | 63 +++---- simevent-0.1.1/simevent/tests/testthat/test-simEventCox.R | 16 + 42 files changed, 191 insertions(+), 149 deletions(-)
Title: Statistical Entropy Analysis of Network Data
Description: Statistical entropy analysis of network data as introduced by Frank and Shafie (2016) <doi:10.1177/0759106315615511>, and a in textbook which is in progress.
Author: Termeh Shafie [aut, cre]
Maintainer: Termeh Shafie <termeh.shafie@uni-konstanz.de>
Diff between netropy versions 0.2.0 dated 2024-09-06 and 0.3.0 dated 2026-04-24
netropy-0.2.0/netropy/vignettes/predplot-status.png |only netropy-0.3.0/netropy/DESCRIPTION | 6 netropy-0.3.0/netropy/MD5 | 58 - netropy-0.3.0/netropy/NAMESPACE | 3 netropy-0.3.0/netropy/NEWS.md | 4 netropy-0.3.0/netropy/R/div_gof.R | 361 ++++++---- netropy-0.3.0/netropy/R/entropy_tetravar.R |only netropy-0.3.0/netropy/R/entropy_trivar.R | 144 +-- netropy-0.3.0/netropy/R/make_pred_plot.R |only netropy-0.3.0/netropy/R/prediction_power.R | 6 netropy-0.3.0/netropy/build/vignette.rds |binary netropy-0.3.0/netropy/inst/doc/div_gof.R | 139 ++- netropy-0.3.0/netropy/inst/doc/div_gof.Rmd | 183 +++-- netropy-0.3.0/netropy/inst/doc/div_gof.html | 117 ++- netropy-0.3.0/netropy/inst/doc/joint_entropies.html | 5 netropy-0.3.0/netropy/inst/doc/make_pred_plot.R |only netropy-0.3.0/netropy/inst/doc/make_pred_plot.Rmd |only netropy-0.3.0/netropy/inst/doc/make_pred_plot.html |only netropy-0.3.0/netropy/inst/doc/prediction_power.R | 5 netropy-0.3.0/netropy/inst/doc/prediction_power.Rmd | 8 netropy-0.3.0/netropy/inst/doc/prediction_power.html | 16 netropy-0.3.0/netropy/inst/doc/univariate_bivariate_trivariate.R | 5 netropy-0.3.0/netropy/inst/doc/univariate_bivariate_trivariate.Rmd | 36 netropy-0.3.0/netropy/inst/doc/univariate_bivariate_trivariate.html | 323 +++++--- netropy-0.3.0/netropy/inst/doc/variable_domains.html | 3 netropy-0.3.0/netropy/man/div_gof.Rd | 181 +++-- netropy-0.3.0/netropy/man/entropy_tetravar.Rd |only netropy-0.3.0/netropy/man/entropy_trivar.Rd | 56 - netropy-0.3.0/netropy/man/make_pred_plot.Rd |only netropy-0.3.0/netropy/tests/testthat/test-entropy_tetravar.R |only netropy-0.3.0/netropy/tests/testthat/test-entropy_trivar.R | 2 netropy-0.3.0/netropy/vignettes/div_gof.Rmd | 183 +++-- netropy-0.3.0/netropy/vignettes/make_pred_plot.Rmd |only netropy-0.3.0/netropy/vignettes/prediction_power.Rmd | 8 netropy-0.3.0/netropy/vignettes/univariate_bivariate_trivariate.Rmd | 36 35 files changed, 1222 insertions(+), 666 deletions(-)
Title: Noncompartmental Analysis for Pharmacokinetic Report
Description: Conduct a noncompartmental analysis with industrial strength.
Some features are
1) CDISC SDTM terms
2) Automatic or manual slope selection
3) Supporting both 'linear-up linear-down' and 'linear-up log-down' method
4) Interval(partial) AUCs with 'linear' or 'log' interpolation method
5) Produce pdf, rtf, text report files.
* Reference: Gabrielsson J, Weiner D. Pharmacokinetic and Pharmacodynamic Data Analysis - Concepts and Applications. 5th ed. 2016. (ISBN:9198299107).
Author: Kyun-Seop Bae [aut, cre]
Maintainer: Kyun-Seop Bae <k@acr.kr>
Diff between ncar versions 0.5.1 dated 2026-03-26 and 0.6.0 dated 2026-04-24
DESCRIPTION | 11 +-- MD5 | 24 +++---- NAMESPACE | 16 ++-- R/BasicUtil.R | 4 - R/Res2Txt.R | 1 R/pdfNCA.R | 194 +++++++++++++++++++++++++++++---------------------------- R/rtfNCA.R | 153 +++++++++++++++++++++++--------------------- R/txtNCA.R | 13 +-- inst/NEWS.Rd | 5 + man/Res2Txt.Rd | 2 man/pdfNCA.Rd | 3 man/rtfNCA.Rd | 3 man/txtNCA.Rd | 3 13 files changed, 229 insertions(+), 203 deletions(-)
Title: Determines Species Probabilities Based on Functional Traits
Description: The objective of these functions is to derive a species assemblage
that satisfies a functional trait profile. Restoring resilient ecosystems
requires a flexible framework for selecting assemblages that are based on the
functional traits of species. However, current trait-based models have been
limited to algorithms that can only select species by optimising specific trait
values, and could not elegantly accommodate the common desire among restoration
ecologists to produce functionally diverse assemblages. We have solved this
problem by applying a non-linear optimisation algorithm that optimises Rao Q,
a closed-form functional trait diversity index that incorporates species
abundances, subject to other linear constraints. This framework generalises
previous models that only optimised the entropy of the community, and can
optimise both functional diversity and entropy simultaneously. This package
can also be used to generate experimental assemblages to test the effects
of community-level [...truncated...]
Author: Daniel Laughlin [cre, aut],
Loic Chalmandrier [aut]
Maintainer: Daniel Laughlin <danielclaughlin@gmail.com>
Diff between Select versions 1.5 dated 2026-02-23 and 1.6 dated 2026-04-24
DESCRIPTION | 8 MD5 | 10 - R/selectSpecies.R | 429 ++++++++++++++++++++++---------------------- inst/doc/selectSpecies.Rmd | 2 inst/doc/selectSpecies.html | 4 vignettes/selectSpecies.Rmd | 2 6 files changed, 232 insertions(+), 223 deletions(-)
Title: Noncompartmental Analysis for Pharmacokinetic Data
Description: Conduct a noncompartmental analysis with industrial strength.
Some features are
1) Use of CDISC SDTM terms
2) Automatic or manual slope selection
3) Supporting both 'linear-up linear-down' and 'linear-up log-down' method
4) Interval(partial) AUCs with 'linear' or 'log' interpolation method
* Reference: Gabrielsson J, Weiner D. Pharmacokinetic and Pharmacodynamic Data Analysis - Concepts and Applications. 5th ed. 2016. (ISBN:9198299107).
Author: Kyun-Seop Bae [aut, cre]
Maintainer: Kyun-Seop Bae <k@acr.kr>
Diff between NonCompart versions 0.7.2 dated 2026-03-27 and 0.8.0 dated 2026-04-24
DESCRIPTION | 8 +++---- MD5 | 22 ++++++++++---------- R/BestSlope.R | 28 +++++++++++++------------- R/DetSlope.R | 2 - R/Slope.R | 18 ++++++++-------- R/sNCA.R | 58 ++++++++++++++++++++++++++++++------------------------ R/tblNCA.R | 20 ++++++++++++++---- inst/NEWS.Rd | 5 ++++ man/gInterpol.Rd | 2 - man/sNCA.Rd | 5 +++- man/tblAUC.Rd | 2 - man/tblNCA.Rd | 59 +++++++++++++++++++++++++++++++++++++++++++++++++++---- 12 files changed, 154 insertions(+), 75 deletions(-)
Title: Cell Type-Specific Expression Quantitative Trait Loci Mapping
Description: Perform bulk and cell type-specific expression quantitative trait loci mapping with our novel method (Little et al. (2023) <doi:10.1038/s41467-023-38795-w>).
Author: Paul Little [aut, cre]
Maintainer: Paul Little <pllittle321@gmail.com>
This is a re-admission after prior archival of version 1.0.0 dated 2025-03-06
Diff between CSeQTL versions 1.0.0 dated 2025-03-06 and 1.0.1 dated 2026-04-24
CSeQTL-1.0.0/CSeQTL/R/data_analysis.R |only CSeQTL-1.0.0/CSeQTL/man/prep_gene_info.Rd |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/ols_bulk_26885e6af77fe67a1250012b352254bf.RData |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/ols_bulk_26885e6af77fe67a1250012b352254bf.rdb |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/ols_bulk_26885e6af77fe67a1250012b352254bf.rdx |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/ols_cts_6f1b82ddf90f21f2c538c24dd4ea8fbf.RData |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/ols_cts_6f1b82ddf90f21f2c538c24dd4ea8fbf.rdb |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/ols_cts_6f1b82ddf90f21f2c538c24dd4ea8fbf.rdx |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/setup_e7ddeb5007077b5fc51328234b3e33d9.RData |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/setup_e7ddeb5007077b5fc51328234b3e33d9.rdb |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/setup_e7ddeb5007077b5fc51328234b3e33d9.rdx |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-2_b315d4c909ac5ad651297fb0cffd3017.RData |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-2_b315d4c909ac5ad651297fb0cffd3017.rdb |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-2_b315d4c909ac5ad651297fb0cffd3017.rdx |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-3_74a890062247f1a00dedf4a652bc7b0a.RData |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-3_74a890062247f1a00dedf4a652bc7b0a.rdb |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-3_74a890062247f1a00dedf4a652bc7b0a.rdx |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-4_88af329595241ac7714ba2ab5e6c0d06.RData |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-4_88af329595241ac7714ba2ab5e6c0d06.rdb |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-4_88af329595241ac7714ba2ab5e6c0d06.rdx |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-5_4cc7ef040c17758fddaadc0a051aefbf.RData |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-5_4cc7ef040c17758fddaadc0a051aefbf.rdb |only CSeQTL-1.0.0/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-5_4cc7ef040c17758fddaadc0a051aefbf.rdx |only CSeQTL-1.0.1/CSeQTL/DESCRIPTION | 19 - CSeQTL-1.0.1/CSeQTL/MD5 | 57 +-- CSeQTL-1.0.1/CSeQTL/NAMESPACE | 3 CSeQTL-1.0.1/CSeQTL/R/import.R | 1 CSeQTL-1.0.1/CSeQTL/inst/WORDLIST |only CSeQTL-1.0.1/CSeQTL/inst/doc/intro.html | 158 +++------- CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/ols_bulk_c27bb844ca2e4d9874c233d53387f76e.RData |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/ols_bulk_c27bb844ca2e4d9874c233d53387f76e.rdb |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/ols_bulk_c27bb844ca2e4d9874c233d53387f76e.rdx |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/ols_cts_cef0692563220cb6def386034e9a2d93.RData |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/ols_cts_cef0692563220cb6def386034e9a2d93.rdb |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/ols_cts_cef0692563220cb6def386034e9a2d93.rdx |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/setup_8c7281b1695da5d21652f9cbd3083f50.RData |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/setup_8c7281b1695da5d21652f9cbd3083f50.rdb |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/setup_8c7281b1695da5d21652f9cbd3083f50.rdx |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-2_ea51fe06aef9c3724fcd3daef6f1277f.RData |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-2_ea51fe06aef9c3724fcd3daef6f1277f.rdb |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-2_ea51fe06aef9c3724fcd3daef6f1277f.rdx |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-3_f98d00d6847909e25f283ffeca0e4dab.RData |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-3_f98d00d6847909e25f283ffeca0e4dab.rdb |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-3_f98d00d6847909e25f283ffeca0e4dab.rdx |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-4_841a8f488b300b1aadf1a819318a21b0.RData |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-4_841a8f488b300b1aadf1a819318a21b0.rdb |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-4_841a8f488b300b1aadf1a819318a21b0.rdx |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-5_b75bc1fafd4ce1f14b83e08b1830ee57.RData |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-5_b75bc1fafd4ce1f14b83e08b1830ee57.rdb |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_cache/html/unnamed-chunk-5_b75bc1fafd4ce1f14b83e08b1830ee57.rdx |only CSeQTL-1.0.1/CSeQTL/vignettes/intro_files/figure-html/unnamed-chunk-2-3.png |binary CSeQTL-1.0.1/CSeQTL/vignettes/intro_files/figure-html/unnamed-chunk-2-4.png |binary 52 files changed, 92 insertions(+), 146 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-03-10 1.2
2015-10-01 1.1
2015-07-21 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-12-13 1.3
2016-07-19 1.2
2015-11-13 1.1
2015-11-06 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-04-04 0.90.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-03-17 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-05-25 1.0.0
2018-03-13 0.2.2
2018-01-10 0.2.1
2017-10-19 0.2.0
2017-03-16 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-12-09 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-03-01 1.4
2015-09-25 1.2
Title: Seamless R and C++ Integration
Description: The 'Rcpp' package provides R functions as well as C++ classes which
offer a seamless integration of R and C++. Many R data types and objects can be
mapped back and forth to C++ equivalents which facilitates both writing of new
code as well as easier integration of third-party libraries. Documentation
about 'Rcpp' is provided by several vignettes included in this package, via the
'Rcpp Gallery' site at <https://gallery.rcpp.org>, the paper by Eddelbuettel and
Francois (2011, <doi:10.18637/jss.v040.i08>), the book by Eddelbuettel (2013,
<doi:10.1007/978-1-4614-6868-4>) and the paper by Eddelbuettel and Balamuta (2018,
<doi:10.1080/00031305.2017.1375990>); see 'citation("Rcpp")' for details.
Author: Dirk Eddelbuettel [aut, cre] ,
Romain Francois [aut] ,
JJ Allaire [aut] ,
Kevin Ushey [aut] ,
Qiang Kou [aut] ,
Nathan Russell [aut],
Inaki Ucar [aut] ,
Doug Bates [aut] ,
John Chambers [aut]
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between Rcpp versions 1.1.1-1 dated 2026-04-15 and 1.1.1-1.1 dated 2026-04-24
ChangeLog | 11 ++++++----- DESCRIPTION | 15 ++++++++++----- MD5 |only build/vignette.rds |binary inst/NEWS.Rd | 6 ++++-- 5 files changed, 20 insertions(+), 12 deletions(-)