Things we may do next:
Generally speaking, the items below should be considered 'available for
motivated volunteers who want to make a difference'. The simpler the
inclusion into Quantian, the higher the probability that it will
appear.
- The following need Debian packages first:
- MPI Toolbox for Octave (MPITB) at http://atc.ugr.es/javier-bin/mpitb
(suggested by Julio R Banga)
- openBUGS,
the open source implementation of the BUGS (Bayesian Inference via Gibbs
Sampling) system for Monte Carlo Markov Chain estimation -- maybe
as a binary package.
- open Beagle, a
versatile environment for evolutionary computation, would be nice. Needs
Debian packages.
- The ASPECT (Adaptable Simulation
Product Exploration and Control Toolkit) would be nice, but someone needs
to build Debian packages for it.
- There may be some nuggets in the pile at Fortranlib.com. Golddiggers
welcome.
- Dstool
which has/had version 2 in Debian, would be nice if version 3 at U of
Minnesota could get packaged.
- Cactus has been suggested by Marco.
- ePix
suggested by Enric M. Calvo.
- cb2Bib suggested by Marco
Caliari.
- Molekel and mprime suggested by Claudiu Tanaselia.
- GENtle, suggested by Magnus
Manske
- ParaView, an
open-source, parallel visualization application, suggested by Marco Caliari
- GDL -- GNU Data
Language, a GPL'ed IDL implementation, suggested by John Hornstein
- calchep,
comphep,
FeynDiagram (a C++ library to design
Feynman Diagrams) all suggested by Joao Esteves
-
FreeHDL,
SystemC libs and compiler all suggested by Simon de Feber
- The following are available and may be included "soon":
- Add a texmacs-fonts package which needs local rebuilding. Volunteers for
build scripts / simplification?
- CDK for which some packages
(libcdk-java-doc libcdk-java, cdk, libcdk-java-dirbrowser) are
here but they appear dated
(Suggested by Andy Liaw).
- dialign, kalign and probcons: bioinformatic packages for
multiple-sequence alignments that are now in Debian, suggested by Charles
Plessy
- GHDL,
GTKWave,
IVI, suggested by Simon de Feber
- Nicer and sleaker presentation / documentation / experience:
- We need to learn how Simply Mepis gets
the desktop so 'right', and borrow as much as we can. Any volunteers?
- Start collecting items for a FAQ
- Start editing 'discipline-specific pages'
- Shall we build quantian-* metapackages similar to what the Debian junior and Debian med projects do?
- Quantian-specific html pages upon startup would be nice too. Maybe some
of the pdf papers?
- doc-central package, and a link to http://localhost/dc, with thanks to
Graham's Survivor Guide
Things we already did (in reverse chronological order):
- All added on 0.7.9.2:
- NIH's ImageJ (suggested by Fred
Govedich)
- Weka (but we could
still add Grid Weka), both
suggested by Bob McPherson
- ORSA, from Frank
S. Thomas (suggested by Pasquale Tricarico)
- Praat, from Praat.org, suggested by
Rafael Laboissiere
- wxmaxima, suggested by George Gesslein
- inkscape, suggested by Ed Pegg
- xscreensaver and xscreensaver-gl, suggested by Ed Pegg
- All added on 0.7.9.1:
- gerbv, suggested by Chris Steigies
- The KDE application kst, a real-time data stream visualizer
- octaviz, recently packages by Rafael, in Debian experimental right now --
but depends on libvtk4 (>= 4.4.2) which removes mayavi and python-vtk
- mathomatic suggested by George
Gesslein II.
- scigraphica, suggested by Bill Tihen.
- latex-beamer, suggested by Enric M. Calvo
- rubber (a latex et al wrapper, seen on r-help, in Debian)
- python-visual, from vpython, now in
Debian (suggested by Gary Pajer).
- opencv, suggested by Aaron Hoover
- cimg-dev, suggested by Sam Hocevar
- PyVTK, suggested by
Greg P.
- GNU polyxmass, suggested by Filippo Rusconi
- mdbtools, suggested by Anne York
- Support for Gromacs
- Gromacs is a versatile package to perform molecular dynamics,
i.e. simulate the Newtonian equations of motion for systems
with hundreds to millions of particles.
- Done in 0.6.9.3:
- We should reconsider iraf and friends from
ftp://iraf.noao.edu/contrib/debian/; Need to check how free/non-free this is.
- Maybe add clustalw and friends.
- Done in 0.6.9.2:
- LabPlot at http://labplot.sourceforge.net -- with Debian package at
http://www.unet.univie.ac.at/%7Ea0306501/LabPlot/labplot.html (Marco). Turns
out that labplot is compiled against an old libmagick++ library, and
rebuilding it under unstable gets it newer KDE libraries we don't quite want
yet. Next time ... especially as it is now a native Debian package!
- Update these Cernlib package to get them all in sync:
cernlib-core
geant321-data
geant321-doc
kxterm
libeurodec1
libeurodec1-dev
libphotos202
libphotos202-dev
paw
paw++
paw-common
paw-demos
Thanks to Kevin McCarthy for checking this.
- Matplotlib
which need to get into .deb form first. Now at
http://anakonda.altervista.org/debian/packages/ (thanks, Marco)
- subversion, subversion-tools, cvs2svn, tla-load-packages, tla,
tla-buildpackage, tla-tools, tla-load-dirs (suggested by Tony R.)
- kseg suggested by Ed Pegg.
- Done in 0.6.9.1:
- the ddd debugger (suggested by Renato Vitolo)
- slicot,
packaged by Marco
- All done in 0.5.9.4:
- Alliance VHDL, a complete set of free CAD tools and portable
libraries for VLSI design which includes a VHDL compiler and simulator, logic
synthesis tools, and automatic place and route tools, from
http://www-asim.lip6.fr/recherche/alliance (suggested by 'Joe'; has no Debian
packages AFAICT but an rpm; converted to .deb using alien(1))
- pcb, to complement GNU geda (Chris Steigies)
- add gnumeric back in (Marcel Neitsch)
- prepare md5sums to enable 'checkcd' option (Marco)
- suppress 'modules.conf' newer by touch(1)'ing (Marco)
- postgres and pl/r (Joe Conway)
- add lyx back in (Marco)
- use Marco's minirt24 with 'also boot from ext3' patch
- use Marco's boot splash screen replacement logo.16 (on alioth)
- setiathome, tkseti, xplanet, xplanet-images, saoimage, gpsim, gnucap,
oregano, icom, xcircuit, vipec, xsmc-calc, transcalc (Gopal Narayanan)
- xd3d [http://www.cmap.polytechnique.fr/~jouve/xd3d/index.php], suggested
and packaged by Marco
- QtiPlot at http://soft.proindependent.com/qtiplot.html, with Debian
package there (Marco)
- Misc
- geda (Chris Steigies), lam4-dev, atlas3-base-dev (Marco Caliari),
scalapack, petsc, debian-med, screensavers (Ed Pegg) ... were added in
0.5.9.3
- Distributed computing for R
- I have built local packages of rpvm, rpmi and snow. With some help from
Kai Hendry and Elijah Wright, sprng was compiled into a library to so that
rsprng could complete the bundle.
Added in Quantian 0.5.9.1.
- pytables
- A hierarchical database package designed to efficiently manage very large
amounts of data. Suggested by Francesc Alted, packages at Sourceforge and in Debian
Added in Quantian 0.5.9.1.
- Axiom
- Another large computer algebra system, suggested by Tim Daly
Added in Quantian 0.5.9.1.
- CERNlib
- A vast array of packages (paw, geant, libcern, ...). Should take care of
the ROOT request as much as possible.
Added in Quantian 0.5.9.1.
- Prettyfication
- Eventually, custom background images for Quantian would be nice.
Anybody familiar with, say, gimp who wants to contribute files,
send me mail!
Added in Quantian 0.5.9.1.
- Preview-latex
- A wysiwyg mode for emacsen, suggested by David Kastrup.
Done in Quantian 0.4.9.6.
- More suggestions
- ftnchek, lam4 and lam4-dev or mpich and libmpich1.0,
prosper and pdfscreen for LaTeX presentation, maybe kdvi and kghostview
instead of xdvi and gv (we would need aliases, though), pvm. All already
packaged. Suggested by Marco Caliari.
Done in Quantian 0.4.9.5 and 0.4.9.6.
- Add the Lua language
- Suggested by Luis Carvalho, and already in Debian.
Done in Quantian 0.4.9.6.
- Add plotmtv
- Requested by Marco Caliari. Done in Quantian 0.4.9.3.
- Add mpqc (Massively parallel Quantum Chemistry)
- Suggested by Boris; a small-ish .deb is in unstable, but it depends
on the larger libsc4 and suggestes mqpc-support which is also big. We'll see
what we can do. Done in Quantian 0.4.9.2.
- Add xppaut (X phase plane plus auto), a solver for nonlinear equations
- Suggested by Balbir Thomas; a .deb is in unstable, and it depends on
nothing new so this should be easy. Done in Quantian 0.4.9.2.
- Add A+, an APL dialect initially developed by Morgan Stanley
- Good suggestion from Alex. Skomorokhiv. There are a few Debian packages.
Done in Quantian 0.4.9.2.
- Shall we keep acroread in?
- Konqueror tried to load it anyway. Suggested by Mark Esplin. Done in
Quantian 0.4.9.2.
- Shall we put Lyx back in?
- People keep requesting this... Most recently by Lars Jensen. Done in
Quantian 0.4.9.2.
- Also suggested were
- f2py,
scipy.
Done in Quantian 0.4.9.2.
- Add pybliographer
- Suggested by Jose L Gomez Dans
Added in 0.3.9.3.
- Run update-modules
- To suppress the lame '/etc/modules is older than ...' message on boot
Done in 0.3.9.3 with an old-fashioned 'touch -r'.
- Add lush
- Lisp shell for numerics. Deb packages exist, so should be smooth.
Added in 0.3.9.2.
- Add felt
- Suggested by Herberto Ghezzo. Deb packages exist, so should be smooth.
Added in 0.3.9.2.
- IPE drawing / graphics editor
- From ipe.compgeom.org, available
as a .deb in unstable. Added in 0.3.9.2.
- Support for giac
- Yet another computer-algebra system. Deb packages are at the site.
New 0.3.0 downloaded, and installed in 0.3.9.2
- Add MIT Photonic Bands and wajig
- Suggested by S Dutta Gupta. Both are of course in Debian, so should be
easy.
Added in 0.3.9.2.
- Add kile, another integrated Latex frontend
- Suggested by Mike Bourassa.
Added in 0.3.9.2.
- Complete gap by adding gap-character-tables
- Suggested by the Gap team via Bill Allombert
Added in 0.3.9.2.
- Support for Gri
- Gri is an open-source language for scientific graphics
programming. As it is already available as a Debian package,
it should have been included right from the start. Gri, gri-el
and gri-html-doc should be added; xplot may complement Quantian
too.
Added in Quantian 0.3.
- ipython,
- Added in Quantian 0.3.
- Getting lyx back in
- Several emails suggested that removing lyx was suboptimal. We
will to correct that in the next version.
Added in Quantian 0.3.
- Grass
- Another suggestion -- but it comes in at a hefty 91.2mb which we
currently lack.
Added in Quantian 0.3. But removed in 0.3.9.2 as it is
just too darn big. Back in 0.4.9.3.
- Clustering / Open Mosix support
- We had mentioned this right from the start, and have by now
received several emails asking about it. This will hopefully be
available soon. Added in Quantian 0.3.
We also have some 'not so likely' issues:
- ROOT, a toolkit from CERN
- While impressive, it is also large and non-free (in the Debian
sense) so it not very high on my list of priorities. I would
recommended that someone else tackle this is on a standalone
basis. Just take Quantian iso images, delete what you must
and add ROOT. We are very unlikely to go there. Sorry.
Update: Cernlib seems to cover a good part of it, and has been added in 0.5.9.1.
- Astronomy software
- The iraf and xephem Debian packages have been suggested, also midas but I
have not found a .deb for it.
Hm, updated Sep2003: 74.4mb additional space is required for iraf and
xephem, and their are, respectively, from contrib and non-free so these will
get vetoed for now.
- Support for Comedi
- Comedi is a collection of drivers for data-acquisition boards,
along with user-space and kernel APIs. Debian packaeges already
exist so this might be fairly straightforward.
Added in Quantian 0.3.
And removed in 0.3.9.2 as it comedi needs a matching kernel
module. Maybe one day we'll be able to compile it on the fly.
- RSessionDA
- Greg Warnes has some cool code on top of RPy which integrates
R via Zope into powerful webservices. Debian packages would be
needed first.