DESCRIPTION                |    6 +-
 R/multistage.R             |    2 
 R/regtest.R                |    2 
 R/survey.R                 |   11 ++--
 R/surveyrep.R              |    5 +-
 R/twophase.R               |    2 
 inst/NEWS                  |    6 ++
 inst/doc/domain.log        |  109 ++++++++++++++++++---------------------------
 inst/doc/domain.log.2.mine |only
 inst/doc/domain.log.2.r16  |only
 inst/doc/domain.log.mine   |only
 inst/doc/domain.log.r15    |only
 inst/doc/domain.log.r16    |only
 inst/doc/domain.log.r24    |only
 inst/doc/domain.pdf        |binary
 inst/doc/domain.tex        |   20 ++++----
 inst/doc/domain.tex.2.mine |only
 inst/doc/domain.tex.2.r16  |only
 inst/doc/domain.tex.mine   |only
 inst/doc/domain.tex.r15    |only
 inst/doc/domain.tex.r16    |only
 inst/doc/domain.tex.r24    |only
 inst/doc/epi.log           |  108 +++++++++++++++++++++-----------------------
 inst/doc/epi.log.2.mine    |only
 inst/doc/epi.log.2.r16     |only
 inst/doc/epi.log.mine      |only
 inst/doc/epi.log.r15       |only
 inst/doc/epi.log.r16       |only
 inst/doc/epi.log.r24       |only
 inst/doc/epi.pdf           |binary
 inst/doc/epi.tex           |   16 +++---
 inst/doc/phase1.log        |   96 +++++++++++++++++++--------------------
 inst/doc/phase1.log.2.mine |only
 inst/doc/phase1.log.2.r16  |only
 inst/doc/phase1.log.mine   |only
 inst/doc/phase1.log.r15    |only
 inst/doc/phase1.log.r16    |only
 inst/doc/phase1.log.r24    |only
 inst/doc/phase1.pdf        |binary
 inst/doc/survey.log        |  105 +++++++++++++++++--------------------------
 inst/doc/survey.log.2.mine |only
 inst/doc/survey.log.2.r16  |only
 inst/doc/survey.log.mine   |only
 inst/doc/survey.log.r15    |only
 inst/doc/survey.log.r16    |only
 inst/doc/survey.log.r24    |only
 inst/doc/survey.pdf        |binary
 inst/doc/survey.tex        |    4 -
 man/ftable.svystat.Rd      |    1 
 man/hospital.Rd            |    2 
 man/make.calfun.Rd         |   62 +++++++++++++------------
 man/pchisqsum.Rd           |   24 ++++-----
 man/scd.Rd                 |    2 
 man/surveysummary.Rd       |    2 
 man/svyquantile.Rd         |    1 
 tests/api.Rout.save        |   54 +++++++++++-----------
 tests/caleg.Rout.save      |    6 +-
 tests/check.Rout.save      |   19 ++++---
 tests/deff.R               |    3 -
 tests/deff.Rout.save       |    7 +-
 tests/domain.Rout.save     |   10 ++--
 tests/fpc.Rout.save        |   38 +++++++--------
 tests/kalton.Rout.save     |   10 ++--
 tests/lonely.psu.Rout.save |   40 ++++++++++------
 tests/nwts.Rout.save       |    4 -
 tests/rakecheck.Rout.save  |   64 +++++++++++---------------
 tests/twophase.R           |    3 -
 tests/twophase.Rout.save   |    7 +-
 68 files changed, 414 insertions(+), 437 deletions(-)

 aster-0.7-1/aster/inst/doc/Rplots.ps      |only
 aster-0.7-1/aster/inst/doc/trunc-fig1.eps |only
 aster-0.7-1/aster/inst/doc/trunc-fig1.pdf |only
 aster-0.7-1/aster/inst/doc/trunc-fig2.eps |only
 aster-0.7-1/aster/inst/doc/trunc-fig2.pdf |only
 aster-0.7-1/aster/inst/doc/trunc.aux      |only
 aster-0.7-1/aster/inst/doc/trunc.log      |only
 aster-0.7-1/aster/inst/doc/trunc.tex      |only
 aster-0.7-1/aster/inst/doc/tutor-fig1.eps |only
 aster-0.7-1/aster/inst/doc/tutor-fig1.pdf |only
 aster-0.7-1/aster/inst/doc/tutor-fig2.eps |only
 aster-0.7-1/aster/inst/doc/tutor-fig2.pdf |only
 aster-0.7-1/aster/inst/doc/tutor.tex      |only
 aster-0.7-2/aster/CHANGES                 |    2 ++
 aster-0.7-2/aster/DESCRIPTION             |    6 +++---
 aster-0.7-2/aster/data/aphid.rda          |only
 aster-0.7-2/aster/data/chamae.rda         |only
 aster-0.7-2/aster/data/chamae2.rda        |only
 aster-0.7-2/aster/data/echin2.rda         |only
 aster-0.7-2/aster/inst/doc/Makefile       |only
 aster-0.7-2/aster/inst/doc/trunc.pdf      |binary
 aster-0.7-2/aster/inst/doc/tutor.Rnw      |   14 ++++++++++++++
 aster-0.7-2/aster/inst/doc/tutor.pdf      |binary
 aster-0.7-2/aster/man/aphid.Rd            |only
 aster-0.7-2/aster/man/chamae.Rd           |only
 aster-0.7-2/aster/man/chamae2.Rd          |only
 aster-0.7-2/aster/man/echin2.Rd           |only
 aster-0.7-2/aster/man/echinacea.Rd        |    2 +-
 28 files changed, 20 insertions(+), 4 deletions(-)

 ifa-4.0/ifa/libs           |only
 ifa-5.0/ifa/DESCRIPTION    |    6 +++---
 ifa-5.0/ifa/R/ifa.aic.R    |    4 ++--
 ifa-5.0/ifa/R/ifa.em.R     |    2 +-
 ifa-5.0/ifa/man/ifa.aic.Rd |    4 ++--
 ifa-5.0/ifa/man/ifa.bic.Rd |    4 ++--
 ifa-5.0/ifa/man/ifa.em.Rd  |   11 ++++++-----
 ifa-5.0/ifa/src/ifaem.f90  |    9 +++++++--
 8 files changed, 23 insertions(+), 17 deletions(-)

 DESCRIPTION                   |    6 +++---
 inst/doc/diveMove.pdf         |binary
 man/TDR-accessors.Rd          |    3 ++-
 man/TDR-class.Rd              |    3 ++-
 man/TDRcalibrate-accessors.Rd |    3 ++-
 man/TDRcalibrate-class.Rd     |    3 ++-
 man/austFilter.Rd             |    3 ++-
 man/bout-methods.Rd           |    3 ++-
 man/bout-misc.Rd              |    3 ++-
 man/bouts2MLE.Rd              |    3 ++-
 man/bouts2NLS.Rd              |    3 ++-
 man/calibrateDepth.Rd         |    3 ++-
 man/calibrateSpeed.Rd         |    3 ++-
 man/detDive-internal.Rd       |    3 ++-
 man/detPhase-internal.Rd      |    3 ++-
 man/distSpeed.Rd              |    3 ++-
 man/diveMove-internal.Rd      |    3 ++-
 man/diveMove-package.Rd       |    3 ++-
 man/diveStats.Rd              |    3 ++-
 man/dives.Rd                  |    3 ++-
 man/extractDive-methods.Rd    |    3 ++-
 man/labDive-internal.Rd       |    3 ++-
 man/plotTDR-methods.Rd        |    3 ++-
 man/readLocs.Rd               |    3 ++-
 man/readTDR.Rd                |    3 ++-
 man/rqPlot.Rd                 |    3 ++-
 man/sealLocs.Rd               |    1 +
 man/timeBudget-methods.Rd     |    3 ++-
 man/zoc.Rd                    |    5 +++--
 29 files changed, 57 insertions(+), 30 deletions(-)

 DESCRIPTION    |    6 +++---
 R/RMSEP.R      |    2 +-
 inst/CITATION  |    4 ++--
 inst/ChangeLog |    4 ++++
 inst/TODO      |    4 +---
 5 files changed, 11 insertions(+), 9 deletions(-)

Package: termstrc
Type: Package
Title: Term Structure and Credit Spread Estimation
Version: 1.0
Date: 2006-12-15
Author: Robert Ferstl, Josef Hayden
Maintainer: Robert Ferstl  
Depends: R (>= 2.4.0)
Description: The package offers several widely-used term structure estimation procedures,  i.e. the parametric Nelson and Siegel approach, Svensson approach and cubic splines.
License: GPL
Packaged: Mon Jul  9 15:40:02 2007; hornik

Package: proxy
Type: Package
Title: Distance and Similarity Measures
Version: 0.1
Date: 2007-07-09
Author: David Meyer and Christian Buchta
Maintainer: David Meyer 
Description: Provides an extensible framework for the effcient calculation of auto- and cross-proximities, along with implementations of the most popular ones. 
Depends: R (>= 2.4.0)
Suggests: cba
Collate: registry.R database.R dist.R similarities.R dissimilarities.R util.R seal.R
License: GNU GENERAL PUBLIC LICENSE Version 2
Packaged: Mon Jul  9 14:40:29 2007; meyer

 DESCRIPTION        |    6 -
 R/AsympDep.R       |  166 +++++++++++++++++++++++++++++---
 R/confGPD.R        |   10 -
 R/fitGPD.R         |   84 +++++++++++++++-
 R/fitMcGPD.R       |   11 +-
 R/plotBvGPD.R      |    6 -
 R/simGPD.R         |   25 +++-
 R/simmcpot.R       |    6 -
 inst/CHANGES       |    6 +
 inst/ChangeLog     |   46 +++++++++
 inst/doc/guide.pdf |binary
 man/chimeas.Rd     |   32 +++++-
 man/fitGPD.Rd      |   50 ++++++++-
 man/internals.Rd   |    1 
 man/simGPD.Rd      |   48 +++++++--
 man/tsdep.plot.Rd  |only
 src/header.h       |    4 
 src/mcgpdlik.c     |  267 ++++++++++++++++++++++++++++++++++++++++++++++++++++-
 18 files changed, 690 insertions(+), 78 deletions(-)

 ChangeLog              |    7 ++++---
 DESCRIPTION            |    4 ++--
 R/zzz.R                |    2 +-
 src/postprocesschain.f |    4 +++-
 4 files changed, 10 insertions(+), 7 deletions(-)

 DESCRIPTION                 |    8 ++++----
 R/FunCluster.R              |    2 +-
 R/sysdata.rda               |binary
 man/FunCluster.R-package.Rd |    2 +-
 man/FunCluster.Rd           |    2 +-
 5 files changed, 7 insertions(+), 7 deletions(-)

 ggplot-0.4.1/ggplot/inst                 |only
 ggplot-0.4.2/ggplot/DESCRIPTION          |    6 +++---
 ggplot-0.4.2/ggplot/R/grobs-complex.r    |    2 ++
 ggplot-0.4.2/ggplot/R/zzz.r              |only
 ggplot-0.4.2/ggplot/man/ggquantile-ii.rd |    6 ++++--
 5 files changed, 9 insertions(+), 5 deletions(-)

 DESCRIPTION      |   16 ++++++++--------
 configure.in     |   10 +++++-----
 inst/ChangeLog   |   12 +++++++++++-
 src/Makefile.win |    4 ++--
 src/bermudan.cpp |   15 ++++++++++-----
 src/curves.cpp   |   13 +++++++------
 6 files changed, 43 insertions(+), 27 deletions(-)

 pheno-1.0/pheno/INDEX                |only
 pheno-1.0/pheno/data/00Index         |only
 pheno-1.2/pheno/DESCRIPTION          |   32 ++--
 pheno-1.2/pheno/R/connectedSets.R    |   16 +-
 pheno-1.2/pheno/R/date2jul1.R        |only
 pheno-1.2/pheno/R/date2jul2.R        |only
 pheno-1.2/pheno/R/daylength.R        |    4 
 pheno-1.2/pheno/R/daysbetween.R      |only
 pheno-1.2/pheno/R/jul2date1.R        |only
 pheno-1.2/pheno/R/jul2date2.R        |only
 pheno-1.2/pheno/R/leapyear.R         |only
 pheno-1.2/pheno/R/matrix2raw.R       |    9 -
 pheno-1.2/pheno/R/maxConnectedSet.R  |    7 
 pheno-1.2/pheno/R/pheno.ddm.R        |   11 -
 pheno-1.2/pheno/R/pheno.lad.fit.R    |    7 
 pheno-1.2/pheno/R/pheno.mlm.fit.R    |   20 +-
 pheno-1.2/pheno/R/raw2matrix.R       |    5 
 pheno-1.2/pheno/R/seqMK.R            |    2 
 pheno-1.2/pheno/R/zzz.R              |only
 pheno-1.2/pheno/data/Searle.R        |    2 
 pheno-1.2/pheno/data/Simple.R        |    2 
 pheno-1.2/pheno/man/DWD.Rd           |    4 
 pheno-1.2/pheno/man/connectedSets.Rd |    2 
 pheno-1.2/pheno/man/date2jul1.Rd     |only
 pheno-1.2/pheno/man/date2jul2.Rd     |only
 pheno-1.2/pheno/man/daylength.Rd     |    2 
 pheno-1.2/pheno/man/daysbetween.Rd   |only
 pheno-1.2/pheno/man/jul2date1.Rd     |only
 pheno-1.2/pheno/man/jul2date2.Rd     |only
 pheno-1.2/pheno/man/leapyear.Rd      |only
 pheno-1.2/pheno/man/matrix2raw.Rd    |   11 -
 pheno-1.2/pheno/man/pheno.lad.fit.Rd |    8 -
 pheno-1.2/pheno/man/pheno.mlm.fit.Rd |    8 -
 pheno-1.2/pheno/man/raw2matrix.Rd    |    6 
 pheno-1.2/pheno/man/tau.Rd           |   58 +++----
 pheno-1.2/pheno/src/pheno.c          |  257 +++++++++++++++++++++++++++++++++--
 pheno-1.2/pheno/src/pheno.h          |   12 +
 37 files changed, 367 insertions(+), 118 deletions(-)

 optmatch-0.2-3/optmatch/R/SubDivStrat.Nov04.R            |only
 optmatch-0.2-3/optmatch/R/fullmatch200701.R              |only
 optmatch-0.2-3/optmatch/inst/doc/mahalanobisMatching.Rnw |only
 optmatch-0.2-3/optmatch/inst/doc/mahalanobisMatching.pdf |only
 optmatch-0.3-1/optmatch/ChangeLog                        |   11 +
 optmatch-0.3-1/optmatch/DESCRIPTION                      |    6 
 optmatch-0.3-1/optmatch/NAMESPACE                        |    3 
 optmatch-0.3-1/optmatch/R/SubDivStrat2007-06.R           |only
 optmatch-0.3-1/optmatch/R/fullmatch200706.R              |only
 optmatch-0.3-1/optmatch/R/mahal.dist.R                   |only
 optmatch-0.3-1/optmatch/R/makedist.R                     |   27 ++-
 optmatch-0.3-1/optmatch/R/matched.distances.R            |only
 optmatch-0.3-1/optmatch/R/print.optmatch.dlist.R         |only
 optmatch-0.3-1/optmatch/R/pscore.dist.R                  |only
 optmatch-0.3-1/optmatch/R/stratumStructure.R             |    5 
 optmatch-0.3-1/optmatch/ToDo                             |   16 --
 optmatch-0.3-1/optmatch/demo/optmatch.r                  |  111 +++++--------
 optmatch-0.3-1/optmatch/inst/doc/optmatch.aux            |   16 +-
 optmatch-0.3-1/optmatch/inst/doc/optmatch.log            |  119 ++++++++-------
 optmatch-0.3-1/optmatch/inst/doc/optmatch.pdf            |binary
 optmatch-0.3-1/optmatch/inst/doc/optmatch.tex            |   44 +++--
 optmatch-0.3-1/optmatch/man/fullmatch.Rd                 |  101 ++++++------
 optmatch-0.3-1/optmatch/man/mahal.dist.Rd                |only
 optmatch-0.3-1/optmatch/man/makedist.Rd                  |    2 
 optmatch-0.3-1/optmatch/man/matched.distances.Rd         |only
 optmatch-0.3-1/optmatch/man/pscore.dist.Rd               |only
 optmatch-0.3-1/optmatch/man/stratumStructure.Rd          |   12 -
 optmatch-0.3-1/optmatch/src/glib.c                       |only
 optmatch-0.3-1/optmatch/src/main.c                       |only
 optmatch-0.3-1/optmatch/src/wmatch                       |only
 optmatch-0.3-1/optmatch/src/wmatch.c                     |only
 31 files changed, 240 insertions(+), 233 deletions(-)

 DESCRIPTION          |   12 -
 INDEX                |   14 +
 R/bayes.lin.reg.r    |only
 R/binobp.r           |   84 +++++------
 R/binodp.r           |  122 +++++++----------
 R/binogcp.r          |  176 ++++++++++++------------
 R/binomixp.r         |only
 R/normdp.r           |  100 +++++++------
 R/normgcp.r          |  177 ++++++++++++------------
 R/normmixp.r         |only
 R/normnp.r           |  119 +++++++++-------
 R/nvaricp.r          |only
 R/poisdp.r           |only
 R/poisgamp.r         |only
 R/poisgcp.r          |only
 R/sintegral.r        |   41 ++---
 R/sscsample.r        |  224 +++++++++++++++----------------
 R/xdesign.r          |  366 +++++++++++++++++++++++++--------------------------
 man/bayes.lin.reg.Rd |only
 man/binobp.Rd        |   53 +++----
 man/binodp.Rd        |   66 +++++----
 man/binogcp.Rd       |   67 ++++-----
 man/binomixp.Rd      |only
 man/normdp.Rd        |   39 ++---
 man/normgcp.Rd       |   39 ++---
 man/normmixp.Rd      |only
 man/normnp.Rd        |   31 ++--
 man/nvaricp.Rd       |only
 man/poisdp.Rd        |only
 man/poisgamp.Rd      |only
 man/poisgcp.Rd       |only
 man/sintegral.Rd     |   12 +
 man/xdesign.Rd       |    4 
 33 files changed, 904 insertions(+), 842 deletions(-)