Thu, 09 Aug 2007

Package xtable updated to version 1.5-1 with previous version 1.5-0 dated 2007-08-01
Diff between xtable versions 1.5-0 dated 2007-08-01 and 1.5-1 dated 2007-08-09
 DESCRIPTION                |    6 +++---
 R/print.xtable.R           |   20 ++++++++++----------
 inst/doc/xtableGallery.pdf |binary
 3 files changed, 13 insertions(+), 13 deletions(-)
More information about xtable at CRAN
Permanent link
Package vars updated to version 1.1-9 with previous version 1.1-5 dated 2007-07-24
Diff between vars versions 1.1-5 dated 2007-07-24 and 1.1-9 dated 2007-08-09
 vars-1.1-5/vars/man/plot.varcheck.Rd  |only
 vars-1.1-5/vars/man/plot.varest.Rd    |only
 vars-1.1-5/vars/man/plot.varfevd.Rd   |only
 vars-1.1-5/vars/man/plot.varirf.Rd    |only
 vars-1.1-5/vars/man/plot.varprd.Rd    |only
 vars-1.1-5/vars/man/plot.varstabil.Rd |only
 vars-1.1-9/vars/DESCRIPTION           |    6 
 vars-1.1-9/vars/R/VAR.R               |    9 
 vars-1.1-9/vars/R/predict.varest.R    |    2 
 vars-1.1-9/vars/inst/ChangeLog        |   15 +
 vars-1.1-9/vars/inst/doc/vars.pdf     |binary
 vars-1.1-9/vars/inst/doc/vars.ps      |  471 ++++++++++++++++------------------
 vars-1.1-9/vars/man/BQ.Rd             |   17 +
 vars-1.1-9/vars/man/Phi.Rd            |    5 
 vars-1.1-9/vars/man/Psi.Rd            |    3 
 vars-1.1-9/vars/man/SVAR.Rd           |    7 
 vars-1.1-9/vars/man/SVAR2.Rd          |    3 
 vars-1.1-9/vars/man/SVEC.Rd           |    7 
 vars-1.1-9/vars/man/VAR.Rd            |   21 +
 vars-1.1-9/vars/man/VARselect.Rd      |    3 
 vars-1.1-9/vars/man/arch.Rd           |    3 
 vars-1.1-9/vars/man/causality.Rd      |    6 
 vars-1.1-9/vars/man/coefficients.Rd   |    6 
 vars-1.1-9/vars/man/fanchart.Rd       |    4 
 vars-1.1-9/vars/man/fevd.Rd           |    6 
 vars-1.1-9/vars/man/fitted.Rd         |    6 
 vars-1.1-9/vars/man/irf.Rd            |    6 
 vars-1.1-9/vars/man/logLik.Rd         |    2 
 vars-1.1-9/vars/man/normality.Rd      |    5 
 vars-1.1-9/vars/man/plot.Rd           |only
 vars-1.1-9/vars/man/predict.Rd        |    2 
 vars-1.1-9/vars/man/residuals.Rd      |   13 
 vars-1.1-9/vars/man/serial.Rd         |    2 
 vars-1.1-9/vars/man/stability.Rd      |    3 
 vars-1.1-9/vars/man/vec2var.Rd        |    3 
 35 files changed, 342 insertions(+), 294 deletions(-)
More information about vars at CRAN
Permanent link
Package spgwr updated to version 0.4-4 with previous version 0.4-3 dated 2007-04-22
Diff between spgwr versions 0.4-3 dated 2007-04-22 and 0.4-4 dated 2007-08-09
 ChangeLog          |   29 +++++++++++++++++++++++++++--
 DESCRIPTION        |   30 +++++++++++++++---------------
 INDEX              |   32 ++++++++++++++++----------------
 R/gwr.whole.test.R |   11 ++++++++---
 inst/ChangeLog     |   29 +++++++++++++++++++++++++++--
 5 files changed, 93 insertions(+), 38 deletions(-)
More information about spgwr at CRAN
Permanent link
Package seas updated to version 0.3-7 with previous version 0.3-6 dated 2007-06-10
Diff between seas versions 0.3-6 dated 2007-06-10 and 0.3-7 dated 2007-08-09
 DESCRIPTION       |    8 +++----
 R/plot.seas.var.R |   56 ++++++++++++++++++++++++++++--------------------------
 R/seas.norm.R     |   22 ++++++++++-----------
 R/write.help.R    |   47 ++++++++++++++++++++++++++-------------------
 inst/ChangeLog    |    9 +++++++-
 5 files changed, 80 insertions(+), 62 deletions(-)
More information about seas at CRAN
Permanent link
Package rgdal updated to version 0.5-15 with previous version 0.5-14 dated 2007-07-31
Diff between rgdal versions 0.5-14 dated 2007-07-31 and 0.5-15 dated 2007-08-09
 ChangeLog             |   10 ++++++++++
 DESCRIPTION           |    6 +++---
 inst/ChangeLog        |   10 ++++++++++
 src/OGR_write.cpp     |   10 +++++++---
 src/gdal-bindings.cpp |   11 ++++++++---
 src/ogr_geom.cpp      |   11 ++++++++---
 src/ogr_proj.cpp      |   11 ++++++++---
 src/ogrdrivers.cpp    |   12 ++++++++++--
 src/ogrsource.cpp     |   42 ++++++++++++++++++++++++++++++++++++++----
 src/projectit.cpp     |   11 ++++++++---
 10 files changed, 110 insertions(+), 24 deletions(-)
More information about rgdal at CRAN
Permanent link
Package RandVar updated to version 0.6.1 with previous version 0.6 dated 2007-08-07
Diff between RandVar versions 0.6 dated 2007-08-07 and 0.6.1 dated 2007-08-09
 DESCRIPTION          |    6 +++---
 R/AllGeneric.R       |    6 +++---
 inst/doc/RandVar.log |    4 ++--
 inst/doc/RandVar.pdf |binary
 inst/doc/RandVar.tex |    8 ++++----
 5 files changed, 12 insertions(+), 12 deletions(-)
More information about RandVar at CRAN
Permanent link
Package qtl updated to version 1.06-43 with previous version 1.05-2 dated 2006-11-09
Diff between qtl versions 1.05-2 dated 2006-11-09 and 1.06-43 dated 2007-08-09
 qtl-1.05-2/qtl/inst/sampledata/listeria.map         |only
 qtl-1.05-2/qtl/inst/sampledata/listeria.maps        |only
 qtl-1.05-2/qtl/inst/sampledata/listeria.raw         |only
 qtl-1.05-2/qtl/inst/sampledata/listeria_qc.cro      |only
 qtl-1.05-2/qtl/inst/sampledata/listeria_qc.map      |only
 qtl-1.06-43/qtl/.Rbuildindex.617                    |only
 qtl-1.06-43/qtl/DESCRIPTION                         |    8 
 qtl-1.06-43/qtl/INDEX                               |    9 
 qtl-1.06-43/qtl/R/add.cim.covar.R                   |only
 qtl-1.06-43/qtl/R/add_threshold.R                   |only
 qtl-1.06-43/qtl/R/argmax.geno.R                     |    2 
 qtl-1.06-43/qtl/R/arithscan.R                       |   18 
 qtl-1.06-43/qtl/R/calc.genoprob.R                   |  164 +++++
 qtl-1.06-43/qtl/R/calc.pairprob.R                   |    2 
 qtl-1.06-43/qtl/R/cim.R                             |only
 qtl-1.06-43/qtl/R/discan.R                          |   24 
 qtl-1.06-43/qtl/R/effectplot.R                      |   69 +-
 qtl-1.06-43/qtl/R/effectscan.R                      |    3 
 qtl-1.06-43/qtl/R/errorlod.R                        |   41 -
 qtl-1.06-43/qtl/R/est.map.R                         |   62 +-
 qtl-1.06-43/qtl/R/est.rf.R                          |    2 
 qtl-1.06-43/qtl/R/fitqtl.R                          |    6 
 qtl-1.06-43/qtl/R/fitstahl.R                        |  112 ++-
 qtl-1.06-43/qtl/R/makeqtl.R                         |    3 
 qtl-1.06-43/qtl/R/plot.R                            |  137 ++++
 qtl-1.06-43/qtl/R/plot.scanone.R                    |    2 
 qtl-1.06-43/qtl/R/plot.scantwo.R                    |   14 
 qtl-1.06-43/qtl/R/qtlcart_io.R                      |    8 
 qtl-1.06-43/qtl/R/read.cross.R                      |    2 
 qtl-1.06-43/qtl/R/read.cross.csv.R                  |    2 
 qtl-1.06-43/qtl/R/read.cross.csvs.R                 |   20 
 qtl-1.06-43/qtl/R/read.cross.gary.R                 |    2 
 qtl-1.06-43/qtl/R/read.cross.karl.R                 |    2 
 qtl-1.06-43/qtl/R/read.cross.mm.R                   |    2 
 qtl-1.06-43/qtl/R/read.cross.qtx.R                  |    2 
 qtl-1.06-43/qtl/R/ripple.R                          |    2 
 qtl-1.06-43/qtl/R/scanone.R                         |   32 -
 qtl-1.06-43/qtl/R/scanoneboot.R                     |only
 qtl-1.06-43/qtl/R/scanqtl.R                         |   23 
 qtl-1.06-43/qtl/R/scantwo.R                         |   39 -
 qtl-1.06-43/qtl/R/sim.geno.R                        |    2 
 qtl-1.06-43/qtl/R/sim_ril.R                         |   55 +
 qtl-1.06-43/qtl/R/simulate.R                        |    6 
 qtl-1.06-43/qtl/R/summary.cross.R                   |    2 
 qtl-1.06-43/qtl/R/summary.scanone.R                 |   49 -
 qtl-1.06-43/qtl/R/summary.scantwo.R                 |   53 -
 qtl-1.06-43/qtl/R/summary.scantwo.old.R             |    3 
 qtl-1.06-43/qtl/R/util.R                            |  317 ++++++++--
 qtl-1.06-43/qtl/R/vbscan.R                          |    6 
 qtl-1.06-43/qtl/R/write.cross.R                     |   33 -
 qtl-1.06-43/qtl/R/xchr.R                            |    2 
 qtl-1.06-43/qtl/R/zzz.R                             |    2 
 qtl-1.06-43/qtl/data/hyper.RData                    |binary
 qtl-1.06-43/qtl/inst/BUGS.txt                       |   28 
 qtl-1.06-43/qtl/inst/README.txt                     |    4 
 qtl-1.06-43/qtl/inst/STATUS.txt                     |  176 +++++
 qtl-1.06-43/qtl/inst/TODO.txt                       |   99 +--
 qtl-1.06-43/qtl/inst/docs/rqtltour.R                |    1 
 qtl-1.06-43/qtl/inst/sampledata/README.txt          |   20 
 qtl-1.06-43/qtl/inst/sampledata/listeria_map.txt    |only
 qtl-1.06-43/qtl/inst/sampledata/listeria_maps.txt   |only
 qtl-1.06-43/qtl/inst/sampledata/listeria_qc_cro.txt |only
 qtl-1.06-43/qtl/inst/sampledata/listeria_qc_map.txt |only
 qtl-1.06-43/qtl/inst/sampledata/listeria_raw.txt    |only
 qtl-1.06-43/qtl/man/a.starting.point.Rd             |    4 
 qtl-1.06-43/qtl/man/add.cim.covar.Rd                |only
 qtl-1.06-43/qtl/man/add.threshold.Rd                |only
 qtl-1.06-43/qtl/man/argmax.geno.Rd                  |    2 
 qtl-1.06-43/qtl/man/arithscan.Rd                    |    2 
 qtl-1.06-43/qtl/man/arithscanperm.Rd                |    2 
 qtl-1.06-43/qtl/man/badorder.Rd                     |    2 
 qtl-1.06-43/qtl/man/bayesint.Rd                     |    6 
 qtl-1.06-43/qtl/man/c.cross.Rd                      |    2 
 qtl-1.06-43/qtl/man/c.scanone.Rd                    |    2 
 qtl-1.06-43/qtl/man/c.scanoneperm.Rd                |    2 
 qtl-1.06-43/qtl/man/c.scantwoperm.Rd                |    2 
 qtl-1.06-43/qtl/man/calc.errorlod.Rd                |   14 
 qtl-1.06-43/qtl/man/calc.genoprob.Rd                |    2 
 qtl-1.06-43/qtl/man/cbind.scanoneperm.Rd            |    2 
 qtl-1.06-43/qtl/man/checkAlleles.Rd                 |    2 
 qtl-1.06-43/qtl/man/chrlen.Rd                       |    2 
 qtl-1.06-43/qtl/man/cim.Rd                          |only
 qtl-1.06-43/qtl/man/clean.cross.Rd                  |    2 
 qtl-1.06-43/qtl/man/clean.scantwo.Rd                |    2 
 qtl-1.06-43/qtl/man/comparecrosses.Rd               |    2 
 qtl-1.06-43/qtl/man/comparegeno.Rd                  |    2 
 qtl-1.06-43/qtl/man/condense.scantwo.Rd             |    2 
 qtl-1.06-43/qtl/man/convert.scanone.Rd              |    2 
 qtl-1.06-43/qtl/man/convert.scantwo.Rd              |    2 
 qtl-1.06-43/qtl/man/drop.markers.Rd                 |    2 
 qtl-1.06-43/qtl/man/drop.nullmarkers.Rd             |    2 
 qtl-1.06-43/qtl/man/effectplot.Rd                   |   10 
 qtl-1.06-43/qtl/man/est.map.Rd                      |   12 
 qtl-1.06-43/qtl/man/est.rf.Rd                       |    2 
 qtl-1.06-43/qtl/man/fake.4way.Rd                    |    2 
 qtl-1.06-43/qtl/man/fake.bc.Rd                      |    2 
 qtl-1.06-43/qtl/man/fake.f2.Rd                      |    2 
 qtl-1.06-43/qtl/man/fill.geno.Rd                    |    2 
 qtl-1.06-43/qtl/man/find.flanking.Rd                |    3 
 qtl-1.06-43/qtl/man/find.marker.Rd                  |    5 
 qtl-1.06-43/qtl/man/find.markerpos.Rd               |only
 qtl-1.06-43/qtl/man/find.pseudomarker.Rd            |    5 
 qtl-1.06-43/qtl/man/fitstahl.Rd                     |    5 
 qtl-1.06-43/qtl/man/geno.image.Rd                   |only
 qtl-1.06-43/qtl/man/geno.table.Rd                   |   23 
 qtl-1.06-43/qtl/man/jittermap.Rd                    |    2 
 qtl-1.06-43/qtl/man/lodint.Rd                       |    6 
 qtl-1.06-43/qtl/man/max.scanone.Rd                  |    2 
 qtl-1.06-43/qtl/man/max.scantwo.Rd                  |    2 
 qtl-1.06-43/qtl/man/movemarker.Rd                   |    2 
 qtl-1.06-43/qtl/man/nmissing.Rd                     |    2 
 qtl-1.06-43/qtl/man/plot.cross.Rd                   |    2 
 qtl-1.06-43/qtl/man/plot.errorlod.Rd                |    2 
 qtl-1.06-43/qtl/man/plot.geno.Rd                    |    2 
 qtl-1.06-43/qtl/man/plot.info.Rd                    |    2 
 qtl-1.06-43/qtl/man/plot.map.Rd                     |    2 
 qtl-1.06-43/qtl/man/plot.missing.Rd                 |    7 
 qtl-1.06-43/qtl/man/plot.pheno.Rd                   |    2 
 qtl-1.06-43/qtl/man/plot.pxg.Rd                     |    2 
 qtl-1.06-43/qtl/man/plot.rf.Rd                      |    2 
 qtl-1.06-43/qtl/man/plot.scanone.Rd                 |    2 
 qtl-1.06-43/qtl/man/plot.scantwo.Rd                 |    2 
 qtl-1.06-43/qtl/man/pull.geno.Rd                    |    2 
 qtl-1.06-43/qtl/man/pull.map.Rd                     |    2 
 qtl-1.06-43/qtl/man/qtl-internal.Rd                 |   19 
 qtl-1.06-43/qtl/man/qtlversion.Rd                   |    2 
 qtl-1.06-43/qtl/man/read.cross.Rd                   |    2 
 qtl-1.06-43/qtl/man/replace.map.Rd                  |    2 
 qtl-1.06-43/qtl/man/ripple.Rd                       |    2 
 qtl-1.06-43/qtl/man/scanone.Rd                      |    2 
 qtl-1.06-43/qtl/man/scanoneboot.Rd                  |only
 qtl-1.06-43/qtl/man/scantwo.Rd                      |    2 
 qtl-1.06-43/qtl/man/sim.cross.Rd                    |    2 
 qtl-1.06-43/qtl/man/sim.geno.Rd                     |    2 
 qtl-1.06-43/qtl/man/sim.map.Rd                      |    2 
 qtl-1.06-43/qtl/man/strip.partials.Rd               |    2 
 qtl-1.06-43/qtl/man/subset.cross.Rd                 |    2 
 qtl-1.06-43/qtl/man/subset.scanone.Rd               |    2 
 qtl-1.06-43/qtl/man/subset.scantwo.Rd               |    2 
 qtl-1.06-43/qtl/man/summary.cross.Rd                |    2 
 qtl-1.06-43/qtl/man/summary.map.Rd                  |    2 
 qtl-1.06-43/qtl/man/summary.ripple.Rd               |    2 
 qtl-1.06-43/qtl/man/summary.scanone.Rd              |    2 
 qtl-1.06-43/qtl/man/summary.scanoneboot.Rd          |only
 qtl-1.06-43/qtl/man/summary.scanoneperm.Rd          |    2 
 qtl-1.06-43/qtl/man/summary.scantwo.Rd              |    8 
 qtl-1.06-43/qtl/man/summary.scantwo.old.Rd          |    2 
 qtl-1.06-43/qtl/man/summary.scantwoperm.Rd          |    2 
 qtl-1.06-43/qtl/man/switch.order.Rd                 |    9 
 qtl-1.06-43/qtl/man/top.errorlod.Rd                 |    2 
 qtl-1.06-43/qtl/man/write.cross.Rd                  |    2 
 qtl-1.06-43/qtl/src/discan.c                        |    9 
 qtl-1.06-43/qtl/src/discan.h                        |    2 
 qtl-1.06-43/qtl/src/discan_covar.c                  |    7 
 qtl-1.06-43/qtl/src/discan_covar.h                  |    2 
 qtl-1.06-43/qtl/src/fitqtl_imp.c                    |    8 
 qtl-1.06-43/qtl/src/fitqtl_imp.h                    |    2 
 qtl-1.06-43/qtl/src/forwsel.c                       |only
 qtl-1.06-43/qtl/src/forwsel.h                       |only
 qtl-1.06-43/qtl/src/hmm_4way.c                      |   44 -
 qtl-1.06-43/qtl/src/hmm_4way.h                      |   10 
 qtl-1.06-43/qtl/src/hmm_bc.c                        |   12 
 qtl-1.06-43/qtl/src/hmm_bc.h                        |    8 
 qtl-1.06-43/qtl/src/hmm_bci.c                       |  206 +-----
 qtl-1.06-43/qtl/src/hmm_bci.h                       |  112 ---
 qtl-1.06-43/qtl/src/hmm_cc.c                        |    2 
 qtl-1.06-43/qtl/src/hmm_cc.h                        |    2 
 qtl-1.06-43/qtl/src/hmm_f2.c                        |   14 
 qtl-1.06-43/qtl/src/hmm_f2.h                        |    9 
 qtl-1.06-43/qtl/src/hmm_f2i.c                       |only
 qtl-1.06-43/qtl/src/hmm_f2i.h                       |only
 qtl-1.06-43/qtl/src/hmm_main.c                      |  121 +++-
 qtl-1.06-43/qtl/src/hmm_main.h                      |   26 
 qtl-1.06-43/qtl/src/info.c                          |    7 
 qtl-1.06-43/qtl/src/info.h                          |    2 
 qtl-1.06-43/qtl/src/lapackutil.c                    |    2 
 qtl-1.06-43/qtl/src/lapackutil.h                    |    2 
 qtl-1.06-43/qtl/src/ripple.c                        |    7 
 qtl-1.06-43/qtl/src/ripple.h                        |    2 
 qtl-1.06-43/qtl/src/scanone_ehk.c                   |    9 
 qtl-1.06-43/qtl/src/scanone_ehk.h                   |    2 
 qtl-1.06-43/qtl/src/scanone_em.c                    |    7 
 qtl-1.06-43/qtl/src/scanone_em.h                    |    2 
 qtl-1.06-43/qtl/src/scanone_em_covar.c              |    8 
 qtl-1.06-43/qtl/src/scanone_em_covar.h              |    2 
 qtl-1.06-43/qtl/src/scanone_hk.c                    |    7 
 qtl-1.06-43/qtl/src/scanone_hk.h                    |    2 
 qtl-1.06-43/qtl/src/scanone_imp.c                   |   10 
 qtl-1.06-43/qtl/src/scanone_imp.h                   |    3 
 qtl-1.06-43/qtl/src/scanone_mr.c                    |    7 
 qtl-1.06-43/qtl/src/scanone_mr.h                    |    2 
 qtl-1.06-43/qtl/src/scanone_np.c                    |    7 
 qtl-1.06-43/qtl/src/scanone_np.h                    |    2 
 qtl-1.06-43/qtl/src/scantwo_binary_em.c             |   11 
 qtl-1.06-43/qtl/src/scantwo_binary_em.h             |    2 
 qtl-1.06-43/qtl/src/scantwo_em.c                    |    9 
 qtl-1.06-43/qtl/src/scantwo_em.h                    |    2 
 qtl-1.06-43/qtl/src/scantwo_hk.c                    |    9 
 qtl-1.06-43/qtl/src/scantwo_hk.h                    |    2 
 qtl-1.06-43/qtl/src/scantwo_imp.c                   |   10 
 qtl-1.06-43/qtl/src/scantwo_imp.h                   |    3 
 qtl-1.06-43/qtl/src/scantwo_mr.c                    |   12 
 qtl-1.06-43/qtl/src/scantwo_mr.h                    |    2 
 qtl-1.06-43/qtl/src/simulate.c                      |    9 
 qtl-1.06-43/qtl/src/simulate.h                      |    2 
 qtl-1.06-43/qtl/src/simulate_cc.c                   |  593 ++++++++++++--------
 qtl-1.06-43/qtl/src/simulate_cc.h                   |   99 +--
 qtl-1.06-43/qtl/src/stahl_mf.c                      |only
 qtl-1.06-43/qtl/src/stahl_mf.h                      |only
 qtl-1.06-43/qtl/src/summary_scantwo.c               |    8 
 qtl-1.06-43/qtl/src/summary_scantwo.h               |    2 
 qtl-1.06-43/qtl/src/util.c                          |   10 
 qtl-1.06-43/qtl/src/util.h                          |    3 
 qtl-1.06-43/qtl/src/vbscan.c                        |   11 
 qtl-1.06-43/qtl/src/vbscan.h                        |    2 
 qtl-1.06-43/qtl/tests/test_io.R                     |    2 
 qtl-1.06-43/qtl/tests/test_io.Rout.save             |    2 
 217 files changed, 2254 insertions(+), 1177 deletions(-)
More information about qtl at CRAN
Permanent link
Package odfWeave updated to version 0.6.0 with previous version 0.5.9 dated 2007-06-21
Diff between odfWeave versions 0.5.9 dated 2007-06-21 and 0.6.0 dated 2007-08-09
 DESCRIPTION           |    6 +++---
 R/odfInsertPlot.R     |    4 ++--
 inst/doc/odfWeave.pdf |binary
 inst/doc/odfWeave.tex |    2 +-
 4 files changed, 6 insertions(+), 6 deletions(-)
More information about odfWeave at CRAN
Permanent link
Package lss updated to version 0.52 with previous version 0.51 dated 2006-12-10
Diff between lss versions 0.51 dated 2006-12-10 and 0.52 dated 2007-08-09
 DESCRIPTION |    4 ++--
 R/lss.R     |   43 +++++++++++++++++++++++++++++++++++--------
 2 files changed, 37 insertions(+), 10 deletions(-)
More information about lss at CRAN
Permanent link
Package igraph updated to version 0.4.3 with previous version 0.4.2 dated 2007-06-07
Diff between igraph versions 0.4.2 dated 2007-06-07 and 0.4.3 dated 2007-08-09
 ChangeLog                  |   10 
 DESCRIPTION                |    8 
 R/community.R              |    2 
 R/plot.R                   |    6 
 configure                  |  559 +++++++++++++++------------------------------
 configure.in               |    2 
 man/ba.game.Rd             |    2 
 man/cliques.Rd             |    2 
 man/independent.sets.Rd    |    2 
 man/spinglass.community.Rd |    2 
 src/attributes.h           |    4 
 src/community.c            |    9 
 src/fast_community.c       |   93 ++++++-
 src/foreign-gml-lexer.c    |    2 
 src/foreign-gml-parser.c   |    2 
 src/foreign-gml-parser.h   |    2 
 src/foreign-graphml.c      |  118 ++++++---
 src/foreign-lgl-lexer.c    |    2 
 src/foreign-lgl-parser.c   |    2 
 src/foreign-lgl-parser.h   |    2 
 src/foreign-ncol-lexer.c   |    2 
 src/foreign-ncol-parser.c  |    2 
 src/foreign-ncol-parser.h  |    2 
 src/foreign-pajek-lexer.c  |    2 
 src/foreign-pajek-parser.c |    2 
 src/foreign-pajek-parser.h |    2 
 src/iterators.c            |    2 
 src/matrix.c               |    6 
 src/vector_ptr.c           |    2 
 29 files changed, 401 insertions(+), 452 deletions(-)
More information about igraph at CRAN
Permanent link
Package gtools updated to version 2.4.0 with previous version 2.3.1 dated 2007-04-11
Diff between gtools versions 2.3.1 dated 2007-04-11 and 2.4.0 dated 2007-08-09
 ChangeLog           |   51 +++++++++++++++++++++++++++++++++++++++++++++++++++
 DESCRIPTION         |    5 ++---
 NAMESPACE           |    2 ++
 NEWS                |   12 ++++++++++++
 R/ask.R             |only
 R/binsearch.R       |only
 man/ask.Rd          |only
 man/binsearch.Rd    |only
 man/combinations.Rd |    4 ++--
 9 files changed, 69 insertions(+), 5 deletions(-)
More information about gtools at CRAN
Permanent link
Package genetics updated to version 1.3.0 with previous version 1.2.1 dated 2006-12-12
Diff between genetics versions 1.2.1 dated 2006-12-12 and 1.3.0 dated 2007-08-09
 genetics-1.2.1/genetics/R/binsearch.R            |only
 genetics-1.2.1/genetics/man/binsearch.Rd         |only
 genetics-1.2.1/genetics/svn-commit.2.tmp         |only
 genetics-1.2.1/genetics/svn-commit.3.tmp         |only
 genetics-1.2.1/genetics/svn-commit.4.tmp         |only
 genetics-1.2.1/genetics/svn-commit.tmp           |only
 genetics-1.3.0/genetics/ChangeLog                |  172 +++++++++++++++++
 genetics-1.3.0/genetics/DESCRIPTION              |    9 
 genetics-1.3.0/genetics/NAMESPACE                |   17 +
 genetics-1.3.0/genetics/NEWS                     |   42 +++-
 genetics-1.3.0/genetics/R/HWE.test.R             |   13 +
 genetics-1.3.0/genetics/R/diseq.R                |   55 ++---
 genetics-1.3.0/genetics/R/expectedGenotypes.R    |   62 ++++--
 genetics-1.3.0/genetics/R/genotype.R             |  230 +++++++++++++++++++----
 genetics-1.3.0/genetics/R/groupGenotype.R        |only
 genetics-1.3.0/genetics/R/order.genotype.R       |only
 genetics-1.3.0/genetics/R/plot.genotype.R        |   18 -
 genetics-1.3.0/genetics/R/power.casectl.R        |  155 ---------------
 genetics-1.3.0/genetics/R/power.casectl.plot.R   |only
 genetics-1.3.0/genetics/R/summary.genotype.R     |   27 +-
 genetics-1.3.0/genetics/R/zzz.R                  |   20 +-
 genetics-1.3.0/genetics/man/HWE.test.Rd          |    4 
 genetics-1.3.0/genetics/man/diseq.Rd             |    5 
 genetics-1.3.0/genetics/man/expectedGenotypes.Rd |   69 ++++--
 genetics-1.3.0/genetics/man/genotype.Rd          |   85 ++++++--
 genetics-1.3.0/genetics/man/groupGenotype.Rd     |only
 genetics-1.3.0/genetics/man/locus.Rd             |   20 +-
 genetics-1.3.0/genetics/man/order.genotype.Rd    |only
 genetics-1.3.0/genetics/man/plot.genotype.Rd     |   10 -
 genetics-1.3.0/genetics/man/power.casectl.Rd     |   53 ++++-
 genetics-1.3.0/genetics/man/print.LD.Rd          |   16 -
 genetics-1.3.0/genetics/man/summary.genotype.Rd  |   16 -
 32 files changed, 731 insertions(+), 367 deletions(-)
More information about genetics at CRAN
Permanent link
New package GSM with initial version 0.1-2
Package: GSM
Title: Gamma Shape Mixture
Description: This package implements a Bayesian approach for estimation of a mixture of gamma distributions in which the mixing occurs over the shape parameter. This family provides a flexible and novel approach for modeling heavy-tailed distributions, it is computationally efficient, and it only requires to specify a prior distribution for a single parameter.
Version: 0.1-2
Date: 2007-08-10
Author: Sergio Venturini
Maintainer: Sergio Venturini 
Depends: gtools
License: GPL (version 2 or later)
URL: http://www.bepress.com/jhubiostat/paper124
Packaged: Thu Aug  9 15:18:52 2007; Sergio

More information about GSM at CRAN
Permanent link
Package bcp updated to version 1.7.1 with previous version 1.7 dated 2007-07-12
Diff between bcp versions 1.7 dated 2007-07-12 and 1.7.1 dated 2007-08-09
 DESCRIPTION |    4 ++--
 R/output.R  |    8 +++++---
 2 files changed, 7 insertions(+), 5 deletions(-)
More information about bcp at CRAN
Permanent link
Package plotAndPlayGTK updated to version 0.8.55 with previous version 0.8.51 dated 2007-08-04
Diff between plotAndPlayGTK versions 0.8.51 dated 2007-08-04 and 0.8.55 dated 2007-08-09
 DESCRIPTION                    |   10 -
 NAMESPACE                      |    1 
 R/guiUtils.R                   |   64 ++++--
 R/plotAndPlayGTK.R             |  388 ++++++++++++++++++++++++++++++++++-------
 man/editAsText.Rd              |   12 -
 man/guiDo.Rd                   |    7 
 man/guiTextInput.Rd            |only
 man/plotAndPlay.Rd             |   42 +++-
 man/plotAndPlayButtons.Rd      |    2 
 man/plotAndPlayGTK-internal.Rd |    3 
 10 files changed, 419 insertions(+), 110 deletions(-)
More information about plotAndPlayGTK at CRAN
Permanent link
New package RDieHarder with initial version 0.0.5
Package: RDieHarder
Version: 0.0.5
Date: $Date: 2007-08-02 21:26:16 -0500 (Thu, 02 Aug 2007) $
Author: Dirk Eddelbuettel 
Maintainer: Dirk Eddelbuettel 
Title: R interface to the dieharder RNG test suite
Description: The RDieHarder packages provides an R interface to the 
   dieharder suite of random number generators and tests that was
   developed by Robert G. Brown, extending earlier work by George
   Marsaglia and others.
Depends: R (>= 2.5.0)
SystemRequirements: DieHarder library from
  http://www.phy.duke.edu/~rgb/General/dieharder.php, 
  GNU GSL for the GSL random-number generators
License: GPL Version 2 or later
URL: http://www.phy.duke.edu/~rgb/General/dieharder.php 
Packaged: Sun Aug  5 11:10:52 2007; edd

More information about RDieHarder at CRAN
Permanent link
Package optmatch updated to version 0.3-2 with previous version 0.3-1 dated 2007-07-09
Diff between optmatch versions 0.3-1 dated 2007-07-09 and 0.3-2 dated 2007-08-09
 optmatch-0.3-1/optmatch/inst/doc/optmatch.tex    |only
 optmatch-0.3-1/optmatch/inst/doc/optmatchbib.bib |only
 optmatch-0.3-1/optmatch/src/glib.c               |only
 optmatch-0.3-1/optmatch/src/main.c               |only
 optmatch-0.3-1/optmatch/src/wmatch               |only
 optmatch-0.3-1/optmatch/src/wmatch.c             |only
 optmatch-0.3-2/optmatch/ChangeLog                |   10 
 optmatch-0.3-2/optmatch/DESCRIPTION              |    6 
 optmatch-0.3-2/optmatch/R/Ops.optmatch.dlist.R   |   31 
 optmatch-0.3-2/optmatch/R/mahal.dist.R           |   54 +
 optmatch-0.3-2/optmatch/R/makedist.R             |   21 
 optmatch-0.3-2/optmatch/R/pairmatch.R            |    2 
 optmatch-0.3-2/optmatch/R/pscore.dist.R          |    7 
 optmatch-0.3-2/optmatch/ToDo                     |    3 
 optmatch-0.3-2/optmatch/inst/doc/optmatch.Rnw    |  159 ++--
 optmatch-0.3-2/optmatch/inst/doc/optmatch.aux    |   23 
 optmatch-0.3-2/optmatch/inst/doc/optmatch.bbl    |    8 
 optmatch-0.3-2/optmatch/inst/doc/optmatch.blg    |   36 
 optmatch-0.3-2/optmatch/inst/doc/optmatch.log    |  329 ++++----
 optmatch-0.3-2/optmatch/inst/doc/optmatch.pdf    |binary
 optmatch-0.3-2/optmatch/src/relax4s.f            |  858 +++++++++++------------
 21 files changed, 813 insertions(+), 734 deletions(-)
More information about optmatch at CRAN
Permanent link
Package haplo.ccs updated to version 1.3 with previous version 1.2 dated 2006-08-25
Diff between haplo.ccs versions 1.2 dated 2006-08-25 and 1.3 dated 2007-08-09
 DESCRIPTION      |    6 +++---
 R/haplo.ccs.R    |    2 +-
 man/haplo.Rd     |   10 +++++-----
 man/haplo.ccs.Rd |   31 ++++++++++++++-----------------
 4 files changed, 23 insertions(+), 26 deletions(-)
More information about haplo.ccs at CRAN
Permanent link
Package gWidgetstcltk updated to version 0.0-4 with previous version 0.0-3 dated 2007-08-02
Diff between gWidgetstcltk versions 0.0-3 dated 2007-08-02 and 0.0-4 dated 2007-08-09
 DESCRIPTION        |    6 +--
 R/aaaGenerics.R    |   12 ------
 R/aaaHandlers.R    |   18 +++++++--
 R/gcheckbox.R      |   11 ++++-
 R/gcheckboxgroup.R |   17 +++++---
 R/glabel.R         |    3 +
 R/gradio.R         |   10 ++++-
 R/gtable.R         |  102 ++++++++++++++++++++++++++++++++---------------------
 8 files changed, 111 insertions(+), 68 deletions(-)
More information about gWidgetstcltk at CRAN
Permanent link
Package gWidgetsRGtk2 updated to version 0.0-21 with previous version 0.0-20 dated 2007-08-02
Diff between gWidgetsRGtk2 versions 0.0-20 dated 2007-08-02 and 0.0-21 dated 2007-08-09
 ChangeLog                         |   17 +++++++++++++++++
 DESCRIPTION                       |    6 +++---
 R/aaaGenerics.R                   |   31 +++++++++++++++++++++++++++----
 R/dnd.R                           |   15 +++++++++------
 R/gcheckboxgroup.R                |   10 +++++++---
 R/gdialogs.R                      |    3 ++-
 R/gimage.R                        |    2 +-
 R/glabel.R                        |   27 ++++++++++++++++++++-------
 R/gmenu.R                         |   11 +++++++++--
 R/gradio.R                        |   29 +++++++++++++++++++++++------
 man/gWidgetsRGtk2-undocumented.Rd |    6 ++++--
 11 files changed, 122 insertions(+), 35 deletions(-)
More information about gWidgetsRGtk2 at CRAN
Permanent link
Package gss updated to version 1.0-0 with previous version 0.9-3 dated 2004-09-25
Diff between gss versions 0.9-3 dated 2004-09-25 and 1.0-0 dated 2007-08-09
 gss-0.9-3/gss/R/grkpk1.R               |only
 gss-0.9-3/gss/R/gssanova1.R            |only
 gss-0.9-3/gss/R/mkrk.factor.R          |only
 gss-0.9-3/gss/R/mkterm.cubic.R         |only
 gss-0.9-3/gss/R/mkterm.cubic1.R        |only
 gss-0.9-3/gss/R/mkterm.linear.R        |only
 gss-0.9-3/gss/R/mkterm.linear1.R       |only
 gss-0.9-3/gss/R/mkterm.tp.R            |only
 gss-0.9-3/gss/R/predict.ssanova1.R     |only
 gss-0.9-3/gss/R/project.gssanova1.R    |only
 gss-0.9-3/gss/R/project.ssanova1.R     |only
 gss-0.9-3/gss/R/rkpk1.R                |only
 gss-0.9-3/gss/R/ssanova1.R             |only
 gss-0.9-3/gss/R/summary.gssanova1.R    |only
 gss-0.9-3/gss/R/summary.ssanova1.R     |only
 gss-0.9-3/gss/man/gssanova1.Rd         |only
 gss-0.9-3/gss/man/mkrk.factor.Rd       |only
 gss-0.9-3/gss/man/mkterm.ssanova.Rd    |only
 gss-0.9-3/gss/man/rkpk1.Rd             |only
 gss-0.9-3/gss/man/ssanova1.Rd          |only
 gss-0.9-3/gss/man/summary.gssanova1.Rd |only
 gss-0.9-3/gss/src/dnewton.r            |only
 gss-0.9-3/gss/src/dnewton1.r           |only
 gss-0.9-3/gss/src/drkl.r               |only
 gss-0.9-3/gss/src/hrkl.r               |only
 gss-0.9-3/gss/src/hzdaux.r             |only
 gss-0.9-3/gss/src/hzdnewton.r          |only
 gss-0.9-3/gss/src/hzdnewton1.r         |only
 gss-0.9-3/gss/src/reg.r                |only
 gss-1.0-0/gss/ChangeLog                |   19 +
 gss-1.0-0/gss/DESCRIPTION              |    4 
 gss-1.0-0/gss/INDEX                    |   42 +-
 gss-1.0-0/gss/R/cdssden.R              |   79 +++-
 gss-1.0-0/gss/R/grkpk.R                |  535 ++++++++++++++++++++++-----------
 gss-1.0-0/gss/R/grkpk0.R               |only
 gss-1.0-0/gss/R/gssanova.R             |   79 +++-
 gss-1.0-0/gss/R/gssanova0.R            |only
 gss-1.0-0/gss/R/hzdrate.sshzd.R        |    8 
 gss-1.0-0/gss/R/mkfun.factor.R         |only
 gss-1.0-0/gss/R/mkfun.poly.R           |   94 ++++-
 gss-1.0-0/gss/R/mkfun.tp.R             |   49 ++-
 gss-1.0-0/gss/R/mkterm.R               |only
 gss-1.0-0/gss/R/predict.ssanova.R      |   60 +--
 gss-1.0-0/gss/R/predict.ssanova0.R     |only
 gss-1.0-0/gss/R/print.R                |  142 ++++----
 gss-1.0-0/gss/R/project.gssanova.R     |only
 gss-1.0-0/gss/R/project.ssanova.R      |only
 gss-1.0-0/gss/R/rkpk.R                 |  488 +++++++++++++++++++-----------
 gss-1.0-0/gss/R/rkpk0.R                |only
 gss-1.0-0/gss/R/ssanova.R              |   67 ++--
 gss-1.0-0/gss/R/ssanova0.R             |only
 gss-1.0-0/gss/R/ssden.R                |  119 ++++---
 gss-1.0-0/gss/R/sshzd.R                |   45 +-
 gss-1.0-0/gss/R/summary.gssanova.R     |   50 +--
 gss-1.0-0/gss/R/summary.gssanova0.R    |only
 gss-1.0-0/gss/R/summary.ssanova.R      |   31 +
 gss-1.0-0/gss/R/summary.ssanova0.R     |only
 gss-1.0-0/gss/man/bacteriuria.Rd       |    7 
 gss-1.0-0/gss/man/cdssden.Rd           |   13 
 gss-1.0-0/gss/man/drkpk.Rd             |   23 -
 gss-1.0-0/gss/man/dssden.Rd            |    2 
 gss-1.0-0/gss/man/family.Rd            |   15 
 gss-1.0-0/gss/man/fitted.ssanova.Rd    |    2 
 gss-1.0-0/gss/man/gauss.quad.Rd        |    4 
 gss-1.0-0/gss/man/gssanova.Rd          |  168 +++++-----
 gss-1.0-0/gss/man/gssanova0.Rd         |only
 gss-1.0-0/gss/man/hzdrate.sshzd.Rd     |   29 -
 gss-1.0-0/gss/man/mkfun.poly.Rd        |   33 +-
 gss-1.0-0/gss/man/mkfun.tp.Rd          |   46 +-
 gss-1.0-0/gss/man/mkran.Rd             |   22 -
 gss-1.0-0/gss/man/mkrk.nominal.Rd      |only
 gss-1.0-0/gss/man/mkterm.Rd            |only
 gss-1.0-0/gss/man/nlm0.Rd              |    2 
 gss-1.0-0/gss/man/ozone.Rd             |    2 
 gss-1.0-0/gss/man/predict.ssanova.Rd   |   32 +
 gss-1.0-0/gss/man/print.Rd             |   20 -
 gss-1.0-0/gss/man/project.Rd           |   21 -
 gss-1.0-0/gss/man/rkpk.Rd              |  103 +++---
 gss-1.0-0/gss/man/rkpk0.Rd             |only
 gss-1.0-0/gss/man/smolyak.Rd           |   10 
 gss-1.0-0/gss/man/ssanova.Rd           |  161 +++------
 gss-1.0-0/gss/man/ssanova0.Rd          |only
 gss-1.0-0/gss/man/ssden.Rd             |   91 ++---
 gss-1.0-0/gss/man/sshzd.Rd             |   93 ++---
 gss-1.0-0/gss/man/summary.gssanova.Rd  |   24 -
 gss-1.0-0/gss/man/summary.gssanova0.Rd |only
 gss-1.0-0/gss/man/summary.ssanova.Rd   |    9 
 gss-1.0-0/gss/src/Makevars             |    2 
 gss-1.0-0/gss/src/dnewton1.f           |    4 
 gss-1.0-0/gss/src/hzdnewton1.f         |   79 ++--
 gss-1.0-0/gss/src/ratfor               |only
 91 files changed, 1773 insertions(+), 1155 deletions(-)
More information about gss at CRAN
Permanent link
Package analogue updated to version 0.4-2 with previous version 0.4-1 dated 2007-07-09
Diff between analogue versions 0.4-1 dated 2007-07-09 and 0.4-2 dated 2007-08-09
 analogue-0.4-1/analogue/man/fitted.mat.Rd              |only
 analogue-0.4-1/analogue/man/plot.bayesF.Rd             |only
 analogue-0.4-1/analogue/man/plot.cma.Rd                |only
 analogue-0.4-1/analogue/man/residuals.bootstrap.mat.Rd |only
 analogue-0.4-1/analogue/man/residuals.mat.Rd           |only
 analogue-0.4-2/analogue/DESCRIPTION                    |    6 
 analogue-0.4-2/analogue/R/analog.R                     |    2 
 analogue-0.4-2/analogue/R/bootstrap.R                  |   32 ++++
 analogue-0.4-2/analogue/R/getK.R                       |    6 
 analogue-0.4-2/analogue/R/residuals.bootstrap.mat.R    |   17 +-
 analogue-0.4-2/analogue/R/zzz.R                        |    6 
 analogue-0.4-2/analogue/inst/ChangeLog                 |   23 +++
 analogue-0.4-2/analogue/inst/THANKS                    |    5 
 analogue-0.4-2/analogue/man/analogue-package.Rd        |   24 +--
 analogue-0.4-2/analogue/man/bayesF.Rd                  |   31 +++-
 analogue-0.4-2/analogue/man/bootstrap.Rd               |  118 ++++++-----------
 analogue-0.4-2/analogue/man/bootstrapObject.Rd         |only
 analogue-0.4-2/analogue/man/cma.Rd                     |   74 ++++++++--
 analogue-0.4-2/analogue/man/getK.Rd                    |   20 +-
 analogue-0.4-2/analogue/man/mat.Rd                     |   51 ++++++-
 analogue-0.4-2/analogue/man/plot.mcarlo.Rd             |    2 
 analogue-0.4-2/analogue/man/predict.mat.Rd             |   92 +++++++------
 analogue-0.4-2/analogue/man/reconPlot.Rd               |    3 
 analogue-0.4-2/analogue/man/rlgh.Rd                    |    2 
 analogue-0.4-2/analogue/man/roc.Rd                     |   16 --
 analogue-0.4-2/analogue/man/summary.analog.Rd          |    2 
 analogue-0.4-2/analogue/man/summary.bootstrap.mat.Rd   |    3 
 analogue-0.4-2/analogue/man/summary.cma.Rd             |    2 
 analogue-0.4-2/analogue/man/summary.mat.Rd             |    2 
 analogue-0.4-2/analogue/man/summary.predict.mat.Rd     |    5 
 analogue-0.4-2/analogue/man/swapdiat.Rd                |    1 
 31 files changed, 339 insertions(+), 206 deletions(-)
More information about analogue at CRAN
Permanent link
New package cghFLasso with initial version 0.1-2
Package: cghFLasso
Version: 0.1-2
Date: 2007-05-01
Title: Detecting hot spot on CGH array data with fused lasso regression. 
Author: Robert Tibshirani  , Pei Wang . 
Maintainer: Pei Wang 
Description: Spatial smoothing and hot spot detection using the fused lasso regression
License: GPL version 2 or newer
Packaged: Mon Aug  6 15:44:54 2007; naras

More information about cghFLasso at CRAN
Permanent link

Built and running on Debian GNU/Linux using R, littler and blosxom. Styled with Bootstrap.