Package: SpatialNP Type: Package Title: Multivariate nonparametric methods based on spatial signs and ranks Version: 0.9 Date: 2007-08-30 Author: Seija Sirkia, Jaakko Nevalainen, Klaus Nordhausen, Hannu Oja Maintainer: Seija SirkiaMore information about SpatialNP at CRANDepends: ICSNP Description: This package contains test and estimates of location, tests of independence, tests of sphericity, several estimates of shape and regression all based on spatial signs, symmetrized signs, ranks and signed ranks. License: GPL 2.0 or higher Packaged: Tue Sep 4 14:14:37 2007; ssirkia
QCAGUI-1.2-7/QCAGUI/R/statistics-means-menu.R |only QCAGUI-1.2-7/QCAGUI/R/statistics-models-menu.R |only QCAGUI-1.2-7/QCAGUI/man/Confint.Rd |only QCAGUI-1.2-7/QCAGUI/man/Scatter3DDialog.Rd |only QCAGUI-1.2-7/QCAGUI/man/scatter3d.Rd |only QCAGUI-1.2-8/QCAGUI/DESCRIPTION | 8 QCAGUI-1.2-8/QCAGUI/NAMESPACE | 10 QCAGUI-1.2-8/QCAGUI/R/data-menu.R | 99 ---- QCAGUI-1.2-8/QCAGUI/R/graphs-menu.R | 239 ---------- QCAGUI-1.2-8/QCAGUI/R/model-menu.R | 453 -------------------- QCAGUI-1.2-8/QCAGUI/R/startup.R | 3 QCAGUI-1.2-8/QCAGUI/R/utilities.R | 424 ------------------ QCAGUI-1.2-8/QCAGUI/inst/CHANGES | 8 QCAGUI-1.2-8/QCAGUI/inst/doc/User-Manual-QCAGUI.pdf |binary QCAGUI-1.2-8/QCAGUI/man/aboutQCAGUI.Rd | 2 15 files changed, 18 insertions(+), 1228 deletions(-)More information about QCAGUI at CRAN
DESCRIPTION | 6 +- INDEX | 45 ++++++++++---------- R/alldist.R | 59 +++++++++++++++----------- R/allvc.R | 79 ++++++++++++++++++++--------------- R/print.glmmGQ.R | 5 +- R/print.glmmNPML.R | 14 ++++-- R/summary.glmmGQ.R | 27 +++++++----- R/summary.glmmNPML.R | 35 ++++++++------- inst/doc/Rplots.ps |only inst/doc/npmlreg-v-008.eps |only inst/doc/npmlreg-v-008.pdf |only inst/doc/npmlreg-v-012.eps |only inst/doc/npmlreg-v-012.pdf |only inst/doc/npmlreg-v-015.eps |only inst/doc/npmlreg-v-015.pdf |only inst/doc/npmlreg-v-034.eps |only inst/doc/npmlreg-v-034.pdf |only inst/doc/npmlreg-v-035.eps |only inst/doc/npmlreg-v-035.pdf |only inst/doc/npmlreg-v-041.eps |only inst/doc/npmlreg-v-041.pdf |only inst/doc/npmlreg-v-042.eps |only inst/doc/npmlreg-v-042.pdf |only inst/doc/npmlreg-v.Stex | 99 +++++++++++++++++++++++---------------------- inst/doc/npmlreg-v.aux |only inst/doc/npmlreg-v.log |only inst/doc/npmlreg-v.pdf |binary inst/doc/npmlreg-v.tex |only inst/doc/npmlreg-v.toc |only man/alldist.Rd | 5 +- man/family.glmmNPML.Rd | 12 ++--- man/npmlreg.package.Rd | 8 +-- man/plot.glmmNPML.Rd | 10 ++-- man/predict.glmmNPML.Rd | 6 +- man/summary.glmmNPML.Rd | 11 ++--- 35 files changed, 228 insertions(+), 193 deletions(-)More information about npmlreg at CRAN
GenABEL-1.2-6/GenABEL/demo/exge03d2.R |only GenABEL-1.2-6/GenABEL/inst/doc/GenABEL-internals.pdf |only GenABEL-1.2-6/GenABEL/man/ge03d2c.Rd |only GenABEL-1.2-6/GenABEL/man/ge03d2ex.Rd |only GenABEL-1.2-8/GenABEL/CHANGES.LOG | 549 GenABEL-1.2-8/GenABEL/DESCRIPTION | 6 GenABEL-1.2-8/GenABEL/NAMESPACE | 3 GenABEL-1.2-8/GenABEL/R/Xcheck.R | 63 GenABEL-1.2-8/GenABEL/R/Xfix.R | 15 GenABEL-1.2-8/GenABEL/R/add.plot.R | 18 GenABEL-1.2-8/GenABEL/R/ccfast.R | 20 GenABEL-1.2-8/GenABEL/R/check.marker.R | 230 GenABEL-1.2-8/GenABEL/R/check.marker.internal.R | 58 GenABEL-1.2-8/GenABEL/R/convert.snp.ped.R | 10 GenABEL-1.2-8/GenABEL/R/crnames.R |only GenABEL-1.2-8/GenABEL/R/descriptives.trait.R | 12 GenABEL-1.2-8/GenABEL/R/egscore.R |only GenABEL-1.2-8/GenABEL/R/export.merlin.R | 6 GenABEL-1.2-8/GenABEL/R/grammar.R | 20 GenABEL-1.2-8/GenABEL/R/load.gwaa.data.R | 1 GenABEL-1.2-8/GenABEL/R/mmscore.R | 24 GenABEL-1.2-8/GenABEL/R/plot.scan.gwaa.R | 58 GenABEL-1.2-8/GenABEL/R/polygenic.R | 10 GenABEL-1.2-8/GenABEL/R/qtscore.R | 35 GenABEL-1.2-8/GenABEL/R/refresh.gwaa.data.R |only GenABEL-1.2-8/GenABEL/R/scan.glm.2D.R | 1 GenABEL-1.2-8/GenABEL/R/scan.glm.R | 1 GenABEL-1.2-8/GenABEL/R/scan.haplo.2D.R | 1 GenABEL-1.2-8/GenABEL/R/snp.subset.R | 2 GenABEL-1.2-8/GenABEL/R/summary.check.marker.R | 30 GenABEL-1.2-8/GenABEL/R/summary.snp.data.R | 12 GenABEL-1.2-8/GenABEL/R/update.check.marker.R |only GenABEL-1.2-8/GenABEL/data/ge03d2.RData |binary GenABEL-1.2-8/GenABEL/data/ge03d2c.RData |binary GenABEL-1.2-8/GenABEL/data/ge03d2ex.RData |binary GenABEL-1.2-8/GenABEL/data/srdta.RData |binary GenABEL-1.2-8/GenABEL/demo/00Index | 2 GenABEL-1.2-8/GenABEL/demo/ge03d2.R | 315 GenABEL-1.2-8/GenABEL/demo/ge03d2ex.R |only GenABEL-1.2-8/GenABEL/inst/doc/GenABEL-manual.pdf | 4652 +++-- GenABEL-1.2-8/GenABEL/inst/doc/GenABEL-tutorial.pdf |16360 +++++++++++++++++-- GenABEL-1.2-8/GenABEL/inst/doc/index.html | 4 GenABEL-1.2-8/GenABEL/man/GenABEL-package.Rd | 25 GenABEL-1.2-8/GenABEL/man/add.plot.Rd | 2 GenABEL-1.2-8/GenABEL/man/ccfast.Rd | 3 GenABEL-1.2-8/GenABEL/man/check.marker.Rd | 8 GenABEL-1.2-8/GenABEL/man/convert.snp.ped.Rd | 11 GenABEL-1.2-8/GenABEL/man/crnames.Rd |only GenABEL-1.2-8/GenABEL/man/descriptives.trait.Rd | 6 GenABEL-1.2-8/GenABEL/man/egscore.Rd |only GenABEL-1.2-8/GenABEL/man/ge03d2.Rd | 21 GenABEL-1.2-8/GenABEL/man/grammar.Rd | 5 GenABEL-1.2-8/GenABEL/man/mmscore.Rd | 6 GenABEL-1.2-8/GenABEL/man/plot.check.marker.Rd | 1 GenABEL-1.2-8/GenABEL/man/plot.scan.gwaa.Rd | 3 GenABEL-1.2-8/GenABEL/man/qtscore.Rd | 5 GenABEL-1.2-8/GenABEL/man/refresh.gwaa.data.Rd |only GenABEL-1.2-8/GenABEL/man/snp.subset.Rd | 9 GenABEL-1.2-8/GenABEL/man/summary.check.marker.Rd | 2 GenABEL-1.2-8/GenABEL/src/gwaa.c | 133 60 files changed, 18920 insertions(+), 3838 deletions(-)More information about GenABEL at CRAN
ChangeLog | 9 DESCRIPTION | 6 src/daisy.f | 162 ++++++++--------- src/dysta.f | 58 +++--- src/fanny.c | 2 src/mona.f | 266 ++++++++++++++-------------- src/twins.f | 558 ++++++++++++++++++++++++++++++------------------------------ 7 files changed, 540 insertions(+), 521 deletions(-)More information about cluster at CRAN
Package: choplump Type: Package Title: Choplump tests Version: 0.9-3 Date: 2007-08-29 Author: M.P. Fay Maintainer: Michael P. FayMore information about choplump at CRANDepends: R (>= 2.5.0), stats Description: Choplump Tests are Permutation Tests for Comparing Two Groups with Some Positive but Many Zero Responses License: GPL Packaged: Tue Sep 4 11:18:36 2007; faym
Package: plink Version: 0.0-0 Date: 2007-08-30 Title: Separate Calibration Linking Methods Depends: R (>= 2.4.1), methods, lattice Author: Jonathan WeeksMore information about plink at CRANMaintainer: Jonathan Weeks Description: This package uses unidimensional item response theory methods to compute linking constants and conduct chain linking of tests for multiple groups under a nonequivalent groups common item design. It allows for mean/mean, mean/sigma, Haebara, and Stocking-Lord calibrations of single-format or mixed-format dichotomous (1PL, 2PL, and 3PL) and polytomous (graded response partial credit/generalized partial credit, nominal, and multiple-choice model) common items. LazyLoad: Yes LazyData: Yes License: GPL version 2 or newer Packaged: Tue Sep 4 02:09:14 2007; Jonathan Weeks
ChangeLog | 4 ++++ DESCRIPTION | 6 +++--- R/vect_link.R | 2 +- inst/ChangeLog | 29 ++++++++++++++++++++++++++++- 4 files changed, 36 insertions(+), 5 deletions(-)More information about spgrass6 at CRAN
DESCRIPTION | 6 ++--- R/cox.R | 9 +++++-- man/cvl.Rd | 64 ++++++++++++++++++++++++++++--------------------------- man/penalized.Rd | 16 ++++++++----- man/plotpath.Rd | 3 +- 5 files changed, 54 insertions(+), 44 deletions(-)More information about penalized at CRAN
DESCRIPTION | 2 +- NEWS | 5 +++++ R/JGR.R | 4 ++-- inst/java/JGR.jar |binary inst/scripts/run.in | 2 +- run.in | 2 +- 6 files changed, 10 insertions(+), 5 deletions(-)More information about JGR at CRAN
ChangeLog | 14 +- DESCRIPTION | 4 R/Plotnpop.R | 4 R/Plotntile.R | 4 R/PostProcessChain.R | 25 +++- R/PosteriorMode.R | 8 - R/mcmcFmodel.R | 10 + R/zzz.R | 2 man/Geneland-package.Rd | 4 man/PostProcessChain.Rd | 6 - man/PosteriorMode.Rd | 4 src/main.f | 285 +++++++++++++++++++++++++++--------------------- src/postprocesschain.f | 61 +++++++++- 13 files changed, 267 insertions(+), 164 deletions(-)More information about Geneland at CRAN